View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6521_high_15 (Length: 219)
Name: NF6521_high_15
Description: NF6521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6521_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 34442228 - 34442421
Alignment:
| Q |
11 |
tccaagaatatgtctttgaaggaaagactcaactcttcttccataggtgcatcctcggtcaatatctccaacattaattcggatgtgacctacaaaataa |
110 |
Q |
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| T |
34442228 |
tccaagattatgtctttgaaggaaagactcaactcttcttccataggtgcatcctcggtcaatatctccaacattaattcggatgtgacctacaaaataa |
34442327 |
T |
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| Q |
111 |
aaaatgattagaaaaattgtggcgtgacattgtcactgccgttaagaggatttatccacctcataagtgcgagtcccccaaaatatacaacatg |
204 |
Q |
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| T |
34442328 |
aaaatgattataaaaattgtgacgtgacattgtcactgccgttaagaggatttatccacctcataagtgcgagtcccccaaaatatacaacatg |
34442421 |
T |
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