View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6524_high_10 (Length: 262)
Name: NF6524_high_10
Description: NF6524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6524_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 2258144 - 2258001
Alignment:
| Q |
20 |
acaaacgtgctaaggaatatgttagcttgcttaaatccaatgatcctgttggttttaaccttgttgatgttttggcttggggttctttaggtcatattgt |
119 |
Q |
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| T |
2258144 |
acaaacgtgctaaggaatatgttagcttgcttaaatccaatgatcctgttggttttaaccttgttgatgttttggcttggggttctttaggtcatattgt |
2258045 |
T |
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| Q |
120 |
tgcttactatatcttggctacttctagcaatggttatgatccta |
163 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2258044 |
tgcttactatatcttggctacttctagcaatggttatgatccta |
2258001 |
T |
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