View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6528_low_5 (Length: 225)

Name: NF6528_low_5
Description: NF6528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6528_low_5
NF6528_low_5
[»] chr4 (78 HSPs)
chr4 (37-208)||(43153793-43153962)
chr4 (38-208)||(9528652-9528824)
chr4 (35-206)||(45227819-45227991)
chr4 (38-200)||(4644000-4644163)
chr4 (37-208)||(25274024-25274197)
chr4 (38-200)||(51318127-51318290)
chr4 (37-200)||(34024222-34024386)
chr4 (43-208)||(53616425-53616592)
chr4 (37-208)||(38706485-38706658)
chr4 (37-200)||(44947553-44947717)
chr4 (43-208)||(2115363-2115530)
chr4 (39-208)||(9284054-9284225)
chr4 (43-208)||(9645299-9645466)
chr4 (37-200)||(10389538-10389702)
chr4 (43-208)||(20569402-20569571)
chr4 (38-208)||(10359324-10359495)
chr4 (38-200)||(1532050-1532213)
chr4 (39-200)||(43444535-43444697)
chr4 (37-200)||(56199237-56199401)
chr4 (43-200)||(50766296-50766454)
chr4 (38-182)||(21090284-21090429)
chr4 (37-200)||(6972951-6973115)
chr4 (52-208)||(12265618-12265775)
chr4 (37-200)||(868303-868468)
chr4 (43-200)||(49680684-49680835)
chr4 (52-206)||(46990909-46991064)
chr4 (43-189)||(47417809-47417956)
chr4 (37-189)||(37188390-37188543)
chr4 (40-172)||(49410367-49410500)
chr4 (38-208)||(52097691-52097863)
chr4 (44-196)||(18138705-18138855)
chr4 (44-196)||(49125918-49126068)
chr4 (37-185)||(27593629-27593777)
chr4 (45-195)||(3335953-3336104)
chr4 (38-189)||(35964771-35964923)
chr4 (44-205)||(35261340-35261501)
chr4 (106-200)||(29966534-29966631)
chr4 (44-200)||(1931535-1931692)
chr4 (38-105)||(32952631-32952698)
chr4 (75-208)||(56040438-56040576)
chr4 (139-194)||(31381506-31381561)
chr4 (75-208)||(47320205-47320342)
chr4 (75-195)||(32766693-32766817)
chr4 (75-208)||(2520958-2521096)
chr4 (106-200)||(27360041-27360138)
chr4 (43-89)||(29965782-29965828)
chr4 (25-90)||(14183931-14183995)
chr4 (38-208)||(19853304-19853478)
chr4 (75-206)||(48257427-48257562)
chr4 (106-196)||(17949128-17949225)
chr4 (106-196)||(17952980-17953077)
chr4 (106-200)||(21364931-21365028)
chr4 (74-196)||(28857579-28857704)
chr4 (50-189)||(36184686-36184825)
chr4 (106-196)||(8670693-8670783)
chr4 (38-79)||(31381578-31381619)
chr4 (75-131)||(36194887-36194941)
chr4 (109-161)||(48351037-48351092)
chr4 (117-196)||(7273610-7273692)
chr4 (75-161)||(31891130-31891217)
chr4 (75-161)||(36161890-36161977)
chr4 (106-161)||(43853651-43853709)
chr4 (110-208)||(36204172-36204276)
chr4 (132-196)||(24736166-24736227)
chr4 (75-159)||(35348486-35348571)
chr4 (106-200)||(51888013-51888112)
chr4 (38-158)||(53811171-53811290)
chr4 (56-89)||(7273710-7273743)
chr4 (106-158)||(22038655-22038710)
chr4 (113-208)||(26633463-26633565)
chr4 (38-71)||(28834164-28834197)
chr4 (75-131)||(33921233-33921287)
chr4 (60-159)||(43095793-43095892)
chr4 (118-208)||(4142556-4142653)
chr4 (35-71)||(8009275-8009311)
chr4 (106-208)||(13634323-13634432)
chr4 (106-208)||(21686034-21686143)
chr4 (94-144)||(22301048-22301099)
[»] chr5 (62 HSPs)
chr5 (37-199)||(43148858-43149021)
chr5 (37-208)||(21060058-21060231)
chr5 (37-200)||(7247090-7247254)
chr5 (35-208)||(3271177-3271352)
chr5 (37-198)||(4954123-4954285)
chr5 (35-200)||(18677250-18677415)
chr5 (37-208)||(781519-781692)
chr5 (37-200)||(7241914-7242079)
chr5 (44-196)||(20257484-20257637)
chr5 (38-208)||(27266634-27266806)
chr5 (37-200)||(35475122-35475286)
chr5 (37-208)||(19259587-19259760)
chr5 (37-208)||(34881849-34882021)
chr5 (37-200)||(30298975-30299139)
chr5 (43-208)||(27752062-27752229)
chr5 (37-195)||(42580019-42580178)
chr5 (35-200)||(7150119-7150285)
chr5 (38-200)||(16981422-16981587)
chr5 (44-196)||(15571045-15571198)
chr5 (37-208)||(41184216-41184388)
chr5 (37-200)||(10649775-10649937)
chr5 (37-208)||(30298338-30298513)
chr5 (62-208)||(43008090-43008238)
chr5 (50-196)||(11768143-11768290)
chr5 (37-200)||(2057618-2057786)
chr5 (43-200)||(19280721-19280887)
chr5 (38-208)||(7886715-7886885)
chr5 (37-200)||(28235716-28235884)
chr5 (57-166)||(7612876-7612986)
chr5 (106-200)||(8771965-8772062)
chr5 (44-126)||(42886616-42886696)
chr5 (39-105)||(26578385-26578451)
chr5 (38-100)||(43261704-43261766)
chr5 (74-195)||(10332354-10332478)
chr5 (44-208)||(22978700-22978865)
chr5 (131-208)||(30371847-30371925)
chr5 (38-102)||(41418605-41418669)
chr5 (106-200)||(11976736-11976836)
chr5 (77-208)||(13422093-13422228)
chr5 (75-196)||(25980315-25980440)
chr5 (132-189)||(37483274-37483331)
chr5 (75-161)||(2979149-2979236)
chr5 (75-208)||(14726253-14726391)
chr5 (75-196)||(26825588-26825713)
chr5 (74-131)||(8984861-8984916)
chr5 (79-159)||(34945555-34945636)
chr5 (75-159)||(38597955-38598040)
chr5 (75-196)||(8096304-8096428)
chr5 (75-208)||(24229576-24229714)
chr5 (75-208)||(9113517-9113655)
chr5 (75-208)||(8088005-8088142)
chr5 (52-195)||(13468744-13468887)
chr5 (75-208)||(6011930-6012068)
chr5 (75-208)||(13007387-13007525)
chr5 (114-200)||(36057112-36057201)
chr5 (75-159)||(14082241-14082326)
chr5 (106-151)||(26877962-26878010)
chr5 (163-208)||(35851047-35851093)
chr5 (175-208)||(19645703-19645736)
chr5 (76-195)||(27576174-27576290)
chr5 (38-70)||(6446004-6446036)
chr5 (106-208)||(38007544-38007653)
[»] chr3 (64 HSPs)
chr3 (43-208)||(25162568-25162735)
chr3 (37-200)||(25631310-25631474)
chr3 (41-208)||(44907174-44907343)
chr3 (51-200)||(12116238-12116388)
chr3 (38-200)||(46934769-46934929)
chr3 (39-208)||(32607597-32607768)
chr3 (43-200)||(36906254-36906412)
chr3 (43-208)||(17237937-17238104)
chr3 (37-208)||(29503587-29503760)
chr3 (37-195)||(30648508-30648667)
chr3 (43-196)||(3848707-3848861)
chr3 (37-208)||(4178691-4178864)
chr3 (43-200)||(35498984-35499140)
chr3 (38-200)||(39917183-39917345)
chr3 (44-197)||(22803163-22803317)
chr3 (37-208)||(50611193-50611366)
chr3 (37-200)||(49552008-49552172)
chr3 (44-208)||(46178701-46178867)
chr3 (36-194)||(21916598-21916757)
chr3 (43-208)||(38854814-38854978)
chr3 (79-200)||(38440375-38440497)
chr3 (39-208)||(51202039-51202200)
chr3 (56-193)||(37169374-37169512)
chr3 (43-208)||(2342595-2342747)
chr3 (51-200)||(21488233-21488383)
chr3 (74-200)||(50194137-50194266)
chr3 (38-193)||(31794197-31794351)
chr3 (40-105)||(42719646-42719711)
chr3 (46-165)||(14464645-14464765)
chr3 (38-105)||(36734573-36734640)
chr3 (38-131)||(25849936-25850027)
chr3 (75-208)||(628716-628853)
chr3 (75-200)||(48650535-48650664)
chr3 (75-196)||(35175562-35175686)
chr3 (75-208)||(53807651-53807788)
chr3 (38-196)||(10229598-10229759)
chr3 (75-208)||(33580038-33580176)
chr3 (75-208)||(40487483-40487621)
chr3 (75-208)||(21533601-21533739)
chr3 (75-208)||(43017046-43017184)
chr3 (75-208)||(52922909-52923047)
chr3 (75-196)||(9998625-9998750)
chr3 (75-196)||(10108394-10108519)
chr3 (75-196)||(45568250-45568375)
chr3 (75-196)||(54149149-54149274)
chr3 (56-200)||(4821946-4822092)
chr3 (131-200)||(6823408-6823477)
chr3 (38-208)||(21313158-21313332)
chr3 (75-208)||(6954488-6954626)
chr3 (75-208)||(9797326-9797464)
chr3 (76-131)||(16235585-16235638)
chr3 (75-161)||(51923885-51923972)
chr3 (75-159)||(4711640-4711725)
chr3 (111-208)||(6910227-6910327)
chr3 (178-208)||(33076703-33076733)
chr3 (75-131)||(38859988-38860042)
chr3 (75-194)||(44959780-44959903)
chr3 (75-131)||(51303519-51303573)
chr3 (75-161)||(21289657-21289744)
chr3 (106-161)||(27856352-27856410)
chr3 (77-159)||(32701651-32701734)
chr3 (76-131)||(42455696-42455749)
chr3 (75-161)||(42460907-42460994)
chr3 (164-208)||(45047922-45047966)
[»] chr1 (75 HSPs)
chr1 (37-208)||(9686980-9687153)
chr1 (43-200)||(50148509-50148667)
chr1 (43-208)||(27914882-27915046)
chr1 (35-200)||(51868429-51868595)
chr1 (37-199)||(51871996-51872159)
chr1 (37-208)||(5324334-5324506)
chr1 (44-200)||(50165883-50166040)
chr1 (38-200)||(25406068-25406231)
chr1 (35-200)||(7342853-7343019)
chr1 (43-200)||(11709491-11709649)
chr1 (37-200)||(28035272-28035433)
chr1 (37-200)||(45805613-45805776)
chr1 (46-206)||(31130370-31130532)
chr1 (37-208)||(45425842-45426014)
chr1 (63-208)||(48217596-48217743)
chr1 (43-200)||(19715679-19715837)
chr1 (43-200)||(19723452-19723610)
chr1 (39-200)||(50271924-50272086)
chr1 (38-200)||(3871542-3871704)
chr1 (43-200)||(11454074-11454234)
chr1 (43-186)||(5701398-5701542)
chr1 (46-208)||(20266444-20266608)
chr1 (43-200)||(40646813-40646970)
chr1 (43-208)||(30879214-30879381)
chr1 (59-208)||(31836989-31837140)
chr1 (43-196)||(9172629-9172783)
chr1 (43-196)||(9180611-9180765)
chr1 (43-200)||(33291202-33291360)
chr1 (44-200)||(18569095-18569252)
chr1 (37-208)||(34519261-34519434)
chr1 (37-200)||(9919522-9919683)
chr1 (38-208)||(38520310-38520482)
chr1 (37-208)||(30818139-30818299)
chr1 (37-181)||(40880816-40880961)
chr1 (37-208)||(33816943-33817116)
chr1 (37-208)||(33876413-33876586)
chr1 (43-200)||(32676919-32677072)
chr1 (43-208)||(35584398-35584560)
chr1 (44-208)||(41081479-41081645)
chr1 (38-196)||(39927343-39927502)
chr1 (39-163)||(7997924-7998049)
chr1 (74-208)||(47133064-47133202)
chr1 (75-200)||(24583308-24583436)
chr1 (40-208)||(27872873-27873044)
chr1 (44-131)||(48365622-48365707)
chr1 (38-131)||(7311962-7312053)
chr1 (75-200)||(24583112-24583240)
chr1 (37-105)||(14545650-14545718)
chr1 (75-208)||(49627075-49627210)
chr1 (74-208)||(32678936-32679072)
chr1 (75-208)||(34878070-34878208)
chr1 (44-105)||(39987528-39987588)
chr1 (131-196)||(39987646-39987711)
chr1 (75-206)||(13144608-13144742)
chr1 (75-198)||(19061071-19061197)
chr1 (75-196)||(35484196-35484321)
chr1 (75-208)||(44543434-44543570)
chr1 (58-200)||(44637567-44637714)
chr1 (75-155)||(31919151-31919232)
chr1 (75-208)||(11462274-11462412)
chr1 (75-161)||(36775553-36775640)
chr1 (106-196)||(7337468-7337564)
chr1 (75-159)||(15431511-15431596)
chr1 (149-208)||(14545721-14545781)
chr1 (75-208)||(14872801-14872939)
chr1 (77-159)||(27456648-27456731)
chr1 (75-161)||(48750347-48750434)
chr1 (80-161)||(12635337-12635419)
chr1 (75-159)||(51373703-51373788)
chr1 (106-159)||(51916520-51916576)
chr1 (110-166)||(5600960-5601019)
chr1 (75-131)||(5983998-5984052)
chr1 (92-159)||(8211152-8211220)
chr1 (106-208)||(10776253-10776362)
chr1 (106-208)||(18649756-18649862)
[»] chr6 (57 HSPs)
chr6 (37-200)||(17237070-17237234)
chr6 (35-200)||(12059557-12059723)
chr6 (38-200)||(35001720-35001883)
chr6 (37-208)||(4088589-4088762)
chr6 (53-200)||(25064381-25064529)
chr6 (37-195)||(8196196-8196355)
chr6 (37-208)||(23947092-23947266)
chr6 (43-208)||(8497102-8497270)
chr6 (38-208)||(12653074-12653246)
chr6 (43-206)||(17334888-17335052)
chr6 (38-208)||(28634888-28635060)
chr6 (38-200)||(4984351-4984514)
chr6 (43-200)||(7880886-7881044)
chr6 (38-197)||(33110741-33110901)
chr6 (38-200)||(8027902-8028065)
chr6 (43-208)||(7027998-7028157)
chr6 (43-200)||(7875828-7875986)
chr6 (43-200)||(16419293-16419451)
chr6 (37-200)||(33740362-33740526)
chr6 (37-192)||(10228808-10228967)
chr6 (38-200)||(4468688-4468845)
chr6 (43-189)||(16892611-16892758)
chr6 (74-200)||(12168842-12168971)
chr6 (35-104)||(20619594-20619663)
chr6 (44-196)||(25337701-25337854)
chr6 (56-190)||(33543421-33543553)
chr6 (44-105)||(34489357-34489417)
chr6 (118-208)||(3173987-3174081)
chr6 (75-206)||(7975983-7976117)
chr6 (75-208)||(9341443-9341581)
chr6 (148-200)||(20619662-20619714)
chr6 (75-208)||(31296980-31297117)
chr6 (134-200)||(34489428-34489494)
chr6 (75-208)||(606364-606502)
chr6 (75-208)||(12170628-12170766)
chr6 (75-208)||(33052960-33053098)
chr6 (131-200)||(34185495-34185566)
chr6 (75-196)||(3913379-3913504)
chr6 (75-160)||(20226011-20226097)
chr6 (75-160)||(22119995-22120081)
chr6 (54-208)||(8518889-8519049)
chr6 (75-159)||(23128778-23128863)
chr6 (75-194)||(30493692-30493815)
chr6 (79-194)||(67808-67927)
chr6 (108-200)||(14866633-14866728)
chr6 (75-161)||(546191-546278)
chr6 (75-161)||(9380183-9380270)
chr6 (75-205)||(30608311-30608445)
chr6 (106-208)||(32327012-32327121)
chr6 (75-196)||(21426491-21426616)
chr6 (75-196)||(32060036-32060161)
chr6 (43-77)||(12165974-12166008)
chr6 (61-208)||(29319669-29319821)
chr6 (55-131)||(4351862-4351935)
chr6 (75-131)||(14801987-14802041)
chr6 (115-162)||(6957339-6957389)
chr6 (106-161)||(30776852-30776910)
[»] chr2 (79 HSPs)
chr2 (44-208)||(9986117-9986283)
chr2 (38-208)||(4228256-4228429)
chr2 (38-200)||(8806000-8806163)
chr2 (43-208)||(27248926-27249093)
chr2 (37-208)||(2808248-2808420)
chr2 (37-208)||(34600347-34600520)
chr2 (43-208)||(8971403-8971570)
chr2 (43-200)||(38575270-38575427)
chr2 (37-200)||(20046866-20047030)
chr2 (38-200)||(83965-84128)
chr2 (43-208)||(4192976-4193143)
chr2 (35-200)||(41431159-41431325)
chr2 (37-208)||(21570183-21570356)
chr2 (37-200)||(27949559-27949723)
chr2 (37-208)||(7015486-7015659)
chr2 (37-208)||(25087170-25087341)
chr2 (37-200)||(40625841-40626005)
chr2 (43-208)||(22421867-22422034)
chr2 (43-208)||(36234147-36234304)
chr2 (86-200)||(30420851-30420966)
chr2 (37-200)||(45128337-45128489)
chr2 (74-208)||(31580430-31580566)
chr2 (37-200)||(41712573-41712737)
chr2 (43-208)||(3725319-3725486)
chr2 (106-208)||(6174016-6174121)
chr2 (38-208)||(9374338-9374514)
chr2 (74-200)||(3268619-3268746)
chr2 (44-166)||(17319460-17319583)
chr2 (37-166)||(40659750-40659880)
chr2 (43-174)||(27477287-27477419)
chr2 (37-208)||(32913373-32913534)
chr2 (107-200)||(33228772-33228868)
chr2 (51-196)||(459064-459209)
chr2 (38-195)||(37613915-37614073)
chr2 (43-200)||(32678907-32679052)
chr2 (37-105)||(33229020-33229088)
chr2 (106-200)||(7558652-7558749)
chr2 (114-200)||(21132040-21132129)
chr2 (74-196)||(24461611-24461733)
chr2 (145-208)||(26025271-26025335)
chr2 (37-104)||(6173765-6173832)
chr2 (75-208)||(32448410-32448547)
chr2 (131-200)||(12236842-12236911)
chr2 (74-208)||(39641081-39641217)
chr2 (75-208)||(31788625-31788763)
chr2 (106-200)||(28037285-28037382)
chr2 (41-208)||(37994420-37994590)
chr2 (106-208)||(36324054-36324160)
chr2 (75-208)||(1421845-1421981)
chr2 (145-196)||(8308337-8308388)
chr2 (75-196)||(4100505-4100624)
chr2 (75-200)||(17248950-17249078)
chr2 (107-200)||(32197536-32197632)
chr2 (38-153)||(4903997-4904112)
chr2 (106-206)||(11985029-11985135)
chr2 (106-208)||(1415755-1415864)
chr2 (75-161)||(10237060-10237147)
chr2 (75-208)||(18763637-18763775)
chr2 (106-208)||(30923250-30923356)
chr2 (75-208)||(36692043-36692181)
chr2 (133-200)||(13718954-13719021)
chr2 (106-200)||(23903541-23903638)
chr2 (75-156)||(35220497-35220579)
chr2 (38-208)||(7646611-7646785)
chr2 (75-159)||(33585581-33585666)
chr2 (133-206)||(13141714-13141787)
chr2 (38-130)||(34124585-34124677)
chr2 (78-159)||(8809451-8809533)
chr2 (75-163)||(12554022-12554112)
chr2 (106-200)||(29173519-29173619)
chr2 (106-152)||(31128638-31128687)
chr2 (75-195)||(4778922-4779046)
chr2 (106-159)||(17994572-17994628)
chr2 (90-208)||(5427662-5427785)
chr2 (106-162)||(28871631-28871690)
chr2 (75-130)||(9169136-9169189)
chr2 (106-161)||(14955727-14955785)
chr2 (146-206)||(15690645-15690705)
chr2 (110-208)||(31193129-31193234)
[»] chr7 (64 HSPs)
chr7 (37-196)||(433479-433639)
chr7 (43-208)||(26492500-26492667)
chr7 (37-208)||(45198808-45198981)
chr7 (38-208)||(7640552-7640722)
chr7 (37-208)||(32684797-32684970)
chr7 (37-200)||(22927654-22927818)
chr7 (39-208)||(46822146-46822317)
chr7 (43-200)||(20116717-20116874)
chr7 (35-200)||(23085648-23085814)
chr7 (38-200)||(26583839-26584003)
chr7 (37-208)||(35495950-35496123)
chr7 (43-200)||(2843025-2843183)
chr7 (37-208)||(42066837-42067010)
chr7 (43-208)||(1448607-1448772)
chr7 (43-208)||(34773846-34774013)
chr7 (37-208)||(6559006-6559179)
chr7 (37-208)||(21266519-21266694)
chr7 (37-200)||(35667016-35667180)
chr7 (37-200)||(1485040-1485205)
chr7 (37-189)||(17222796-17222948)
chr7 (44-208)||(31235559-31235725)
chr7 (44-208)||(35261433-35261599)
chr7 (43-200)||(46339189-46339347)
chr7 (38-200)||(42311410-42311571)
chr7 (44-208)||(20083474-20083640)
chr7 (44-200)||(13592294-13592450)
chr7 (37-208)||(23425148-23425321)
chr7 (38-196)||(32521717-32521876)
chr7 (38-195)||(23786705-23786863)
chr7 (35-200)||(19560125-19560289)
chr7 (37-153)||(48208029-48208147)
chr7 (38-208)||(6002159-6002329)
chr7 (44-159)||(46818241-46818360)
chr7 (44-131)||(17499537-17499622)
chr7 (44-131)||(17553592-17553677)
chr7 (106-208)||(14627673-14627778)
chr7 (106-208)||(17611587-17611693)
chr7 (76-208)||(37837251-37837387)
chr7 (37-87)||(14627777-14627827)
chr7 (75-208)||(48316611-48316742)
chr7 (75-200)||(34899408-34899537)
chr7 (106-200)||(37849035-37849132)
chr7 (75-196)||(40993318-40993443)
chr7 (44-102)||(17611245-17611303)
chr7 (106-159)||(19404602-19404658)
chr7 (61-208)||(28044548-28044699)
chr7 (75-131)||(13796805-13796859)
chr7 (75-162)||(25255388-25255476)
chr7 (38-196)||(43369562-43369720)
chr7 (75-208)||(48061583-48061721)
chr7 (167-208)||(12502027-12502069)
chr7 (167-208)||(12527661-12527703)
chr7 (75-129)||(14046698-14046752)
chr7 (75-129)||(14356728-14356782)
chr7 (106-161)||(24351181-24351239)
chr7 (77-159)||(42978773-42978856)
chr7 (79-196)||(8001351-8001472)
chr7 (75-156)||(45349647-45349729)
chr7 (131-182)||(48208158-48208209)
chr7 (60-159)||(9977055-9977154)
chr7 (75-208)||(12141099-12141238)
chr7 (75-131)||(38798942-38798996)
chr7 (164-208)||(23808751-23808795)
chr7 (164-208)||(43847398-43847442)
[»] chr8 (61 HSPs)
chr8 (43-208)||(14906698-14906865)
chr8 (43-200)||(4809106-4809264)
chr8 (35-200)||(29777353-29777519)
chr8 (37-200)||(11725816-11725980)
chr8 (43-200)||(34611946-34612104)
chr8 (37-208)||(44099711-44099882)
chr8 (43-200)||(9498383-9498541)
chr8 (43-200)||(37565663-37565821)
chr8 (37-200)||(32724265-32724429)
chr8 (37-200)||(33896218-33896386)
chr8 (38-208)||(43192123-43192294)
chr8 (38-200)||(44578167-44578330)
chr8 (55-200)||(11267162-11267308)
chr8 (43-188)||(11464313-11464459)
chr8 (37-200)||(9072854-9073018)
chr8 (43-193)||(2656012-2656163)
chr8 (43-208)||(23851269-23851436)
chr8 (43-200)||(9619141-9619299)
chr8 (44-208)||(28239984-28240150)
chr8 (43-208)||(43889899-43890066)
chr8 (37-200)||(43135368-43135527)
chr8 (38-208)||(33342571-33342742)
chr8 (37-185)||(42447826-42447975)
chr8 (38-208)||(33298991-33299163)
chr8 (58-208)||(16794448-16794599)
chr8 (44-208)||(27746890-27747055)
chr8 (44-196)||(39152930-39153084)
chr8 (35-200)||(19876344-19876498)
chr8 (43-173)||(11197025-11197156)
chr8 (43-196)||(15596956-15597110)
chr8 (106-200)||(17949721-17949818)
chr8 (75-208)||(30568111-30568249)
chr8 (44-131)||(15047035-15047120)
chr8 (93-208)||(24099047-24099166)
chr8 (79-208)||(1236488-1236621)
chr8 (75-196)||(23230804-23230929)
chr8 (38-105)||(35580593-35580660)
chr8 (75-156)||(15344469-15344551)
chr8 (75-156)||(15433534-15433616)
chr8 (75-156)||(15524838-15524920)
chr8 (75-196)||(16928560-16928685)
chr8 (75-196)||(45445614-45445739)
chr8 (37-102)||(17949371-17949434)
chr8 (131-196)||(17430663-17430728)
chr8 (106-195)||(21237978-21238072)
chr8 (75-159)||(31013451-31013536)
chr8 (75-151)||(37971444-37971521)
chr8 (75-131)||(41896678-41896732)
chr8 (82-161)||(3240548-3240630)
chr8 (75-208)||(7883031-7883169)
chr8 (75-161)||(8867966-8868056)
chr8 (132-200)||(12654295-12654363)
chr8 (88-196)||(8412325-8412437)
chr8 (131-208)||(17427000-17427078)
chr8 (106-159)||(17693456-17693512)
chr8 (75-159)||(27110308-27110393)
chr8 (76-159)||(14544738-14544822)
chr8 (75-131)||(18890573-18890627)
chr8 (175-208)||(42046497-42046530)
chr8 (168-208)||(6314922-6314962)
chr8 (86-156)||(18994201-18994272)
[»] scaffold0146 (1 HSPs)
scaffold0146 (43-208)||(16095-16262)
[»] scaffold0311 (1 HSPs)
scaffold0311 (35-200)||(8818-8984)
[»] scaffold0014 (1 HSPs)
scaffold0014 (37-208)||(201148-201321)
[»] scaffold0022 (1 HSPs)
scaffold0022 (46-208)||(83212-83377)
[»] scaffold0495 (1 HSPs)
scaffold0495 (37-192)||(5527-5686)
[»] scaffold0003 (1 HSPs)
scaffold0003 (37-200)||(361583-361747)
[»] scaffold0426 (1 HSPs)
scaffold0426 (37-128)||(6434-6523)
[»] scaffold0443 (1 HSPs)
scaffold0443 (107-200)||(4402-4498)
[»] scaffold0009 (1 HSPs)
scaffold0009 (74-208)||(57881-58019)
[»] scaffold0113 (1 HSPs)
scaffold0113 (106-208)||(36465-36571)
[»] scaffold0445 (1 HSPs)
scaffold0445 (75-159)||(1503-1588)
[»] scaffold0372 (1 HSPs)
scaffold0372 (106-200)||(9455-9552)
[»] scaffold0136 (1 HSPs)
scaffold0136 (46-166)||(34600-34720)
[»] scaffold0050 (1 HSPs)
scaffold0050 (75-159)||(65887-65972)
[»] scaffold0127 (1 HSPs)
scaffold0127 (75-159)||(15651-15736)
[»] scaffold0049 (1 HSPs)
scaffold0049 (75-159)||(71145-71230)
[»] scaffold0026 (1 HSPs)
scaffold0026 (75-159)||(71715-71800)
[»] scaffold0219 (1 HSPs)
scaffold0219 (93-159)||(14716-14783)
[»] scaffold0039 (1 HSPs)
scaffold0039 (110-208)||(53193-53295)


Alignment Details
Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 43153962 - 43153793
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcgattca 136  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||  |||||||||||||||||||||||||||||    
T  43153962 ccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctgtta--acttggatgttgtgagtttgttcgattca 43153865  T
Q  137 tcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    |||||||| ||||||||||| |||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  43153864 tcctttacgtttttagcgatattgaatgatgcaatctctcgatttgaatgaataaatatcatttgtttttgt 43153793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 9528824 - 9528652
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||   ||||    
T  9528824 catggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttgaatgttgtgagtttgttcgcagatt 9528727  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  9528726 catcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 9528652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 35 - 206
Target Start/End: Complemental strand, 45227991 - 45227819
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg--- 131  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||  |||||||| |||||  ||||||||||||||||||||||||       
T  45227991 gaccatgaatattccggtcactttaattttatcatatatttttgtgggcattatgcggttatatgttatta--acttggatgttgtgagtttgttcgtag 45227894  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgttttt 206  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  45227893 attcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttttttt 45227819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 4644000 - 4644163
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||||||||||||  |||||||||||||||| |||||||   |||    
T  4644000 catgaatattccggtcaatttaattttatcatatattattgtaggcattatgccgttatatgctatta--acttggatgttgtgagcttgttcgcagatt 4644097  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4644098 catcctttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 4644163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 25274024 - 25274197
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||  |||| |||||||||||||||||||   ||    
T  25274024 ccatggatattccggtcactttaattttatcatatatttttgtaggcattatgctgttatatgctatta--acttagatgttgtgagtttgttcgcagat 25274121  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  25274122 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 25274197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 51318127 - 51318290
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||   ||||    
T  51318127 catggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgatgtgagtttgttcacagatt 51318224  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||| ||||||||  ||||||||||| |||||||||||||| ||||||||||||||||||    
T  51318225 catcctttacgtttttagcagtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattt 51318290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 34024386 - 34024222
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||   ||    
T  34024386 ccatggatattccggtcattttaattttatcatatatttttgtaagcattatgttgttatatgctatta--acttggatgttgtgagtttgttcgcagat 34024289  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  34024288 tcatcctttacgtttttagcggtgttgaatggtgtaatctctcgatttgaatgaatgaatatcattt 34024222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 53616592 - 53616425
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||   ||||||||    
T  53616592 atattccggtcactttaatttcattatatatttttgtaggcattatgccgttatatgctatta--acttggatgatgtgagtttgttcgcagattcatcc 53616495  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  53616494 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 53616425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 38706658 - 38706485
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||| |||||||||||||   |||    
T  38706658 ccatggatatttcggtcactttaattttatcatatatttttgtagacattatgtcgttatatgctat--taacttggatgatgtgagtttgttcgcagat 38706561  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| | |||||||||||    
T  38706560 tcatcttttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatgattttgtttttgt 38706485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 44947553 - 44947717
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||  ||||||||||||||||||||||||   ||    
T  44947553 ccatggatattccggtcactttaattttatcatatatttttgtaggcattgtgccgttatatgttatta--acttggatgttgtgagtttgttcgcagat 44947650  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||| ||||||||| ||||||||    
T  44947651 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgattatcattt 44947717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 2115530 - 2115363
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||   ||||||||    
T  2115530 atattccagtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctatta--acttggatactgtgagtttgttcgcagattcatcc 2115433  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  2115432 tttatgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 2115363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 9284054 - 9284225
Alignment:
Q  39 atgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attc 135  Q
    ||||||||| | ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| |  |||||||||||||||||||||   ||||    
T  9284054 atgaatatttcagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattatca--tggatgttgtgagtttgttcgtagattc 9284151  T
Q  136 atcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||| ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  9284152 atcttttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 9284225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 9645466 - 9645299
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||| |||||||||||||   |||||||||    
T  9645466 atattccggtcactttaattttatcatatacttttgtaggtattatgccgttatatgctat--taacttggatgctgtgagtttgttcgcagattcatcc 9645369  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||| ||| ||||||||||| |||||||||||||||||||||| ||||| | |||||||||||    
T  9645368 tttacgttttttgcggtgttgaatgatgtaatctctcgatttgaatgaataaatattattttgtttttgt 9645299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 10389702 - 10389538
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||| ||||||| |||||||||||||||  ||||||||| ||||||||||||||   ||    
T  10389702 ccatggatattccgatcactttaattttatcatatatttttgtagacattatgccgttatatgctatta--acttggatgctgtgagtttgttcgtggat 10389605  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||  ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  10389604 tcatcctttatgtttttagcggtgttgaatggtgtaatctctcgatttgaatgaatgaatatcattt 10389538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 20569402 - 20569571
Alignment:
Q  43 atattccggtcactttaattttatcatatac--ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcat 137  Q
    ||||||||||||||||||||| ||||||||   ||||||||||||||||| ||||||||||||||  ||||||||  ||||||||||||||   ||||||    
T  20569402 atattccggtcactttaatttcatcatatatatttttgtaggcattatgttgttatatgctatta--acttggataatgtgagtttgttcgcagattcat 20569499  T
Q  138 cctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  20569500 cctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 20569571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 10359495 - 10359324
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| ||||||| ||||||||| |||||||||||| |||||||||||||||| |||||||||||||  ||||||||||| ||||||||||||||   |||    
T  10359495 catggatattccagtcactttatttttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgatgtgagtttgttcgcaaatt 10359398  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||| |||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  10359397 cat-ctttacgtttttagcggtgttgaatgatgtaatctctcgatttggatgaatgaatatcattttgtttttgt 10359324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 1532050 - 1532213
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| |||||| || |||||||||||||||||||| |||||||| ||||||| |||||||||||||||  |||||||||||||||| |||||||   |||    
T  1532050 catggatattctggacactttaattttatcatatatttttgtagacattatgccgttatatgctatta--acttggatgttgtgagcttgttcgcagatt 1532147  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||  ||||||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  1532148 catcctttatgtttttagcggtgttgaatgacgtaatctctcgatttgaatgaatgaatatcattt 1532213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 39 - 200
Target Start/End: Original strand, 43444535 - 43444697
Alignment:
Q  39 atgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattc 135  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||  ||| ||| ||| |||||||||||||   |||||    
T  43444535 atgaatattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctat--taatttgaatgctgtgagtttgttcgcagattc 43444632  T
Q  136 atcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||| || ||| || ||||||||||| ||||||||| |||||||||||||||||||||||    
T  43444633 atcctttacgttcttaacggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcattt 43444697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 56199237 - 56199401
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    |||||||||||||| | ||||||||||||||||||| |||||||| ||||||| ||||| |||||||||  ||||||||| ||||||||||||||   ||    
T  56199237 ccatgaatattccgatgactttaattttatcatatatttttgtagacattatgccgttacatgctatta--acttggatgctgtgagtttgttcgcagat 56199334  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||  ||||||||||| | ||||||||||||||||||||||||| |||||    
T  56199335 tcatcctttacgtttttagcagtgttgaatgatgtgatctctcgatttgaatgaatgaataccattt 56199401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 50766454 - 50766296
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||  ||||||| ||| |||||||||||||   ||||||||     
T  50766454 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctat--taacttgaatgctgtgagtttgttcgtagattcatca 50766357  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    | ||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  50766356 tctacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattt 50766296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 182
Target Start/End: Original strand, 21090284 - 21090429
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt---cgatt 134  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||  ||||||||||||    ||||    
T  21090284 catgaatattccggtcactttaattttatcatctacttttgtaggcattatgtcgttatatgttat--taacttggatagtgtgagtttgtttgcagatt 21090381  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttg 182  Q
    |||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  21090382 catcctttacgtttttagcggtgttgaatgatgtaatctctcaatttg 21090429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 6972951 - 6973115
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||| |||||| |||||||||||||  ||||||||||| | |||||||||||   |||    
T  6972951 ccatggatattccggtgactttaattttatcatatatttttgtaggtattatgccgttatatgctat--taacttggatgctatgagtttgttcacagat 6973048  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||| ||||||||| || ||||||||||| ||| ||||| |||| ||||||||||||||||||    
T  6973049 tcatccttcacatttttaacggtgttgaatgatgtaacctctcaatttaaatgaatgaatatcattt 6973115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 208
Target Start/End: Original strand, 12265618 - 12265775
Alignment:
Q  52 tcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacattt 148  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||  |||||| ||||||||||||||||||   ||||||| | |||| |||    
T  12265618 tcactttaattttatcatatatttttttaggcattatgccgttatatgctat--taactttgatgttgtgagtttgttcacagattcat-cattacgttt 12265714  T
Q  149 ttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||    
T  12265715 ttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaatatcagtttgtttttgt 12265775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 868303 - 868468
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttg-taggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---ga 132  Q
    ||||| |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||  ||||| || |||||| |||||||   ||    
T  868303 ccatggatattccggtcactttaattttatcatatatttttggtaggcattatgccgttatatgctatta--acttgaatattgtgattttgttcacaga 868400  T
Q  133 ttcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||| ||||||  ||||||||| |||| ||||||||||||||||||||| || |||||||||||||||    
T  868401 ttcaacctttatgtttttagcggtgttaaatgatataatctctcgatttaaacgaatgaatatcattt 868468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 49680684 - 49680835
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcgattcatccttt 142  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| |||  ||||||| |||||||||||||    |||| |||||||    
T  49680684 atatttcggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgttat--taacttgaatgttgtgagttt----gatttatccttt 49680777  T
Q  143 acatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    || ||||||||| ||||||||||| ||| |||||||||| ||||||||||||| ||||    
T  49680778 acgtttttagcggtgttgaatgatgtaacctctcgatttaaatgaatgaatattattt 49680835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 206
Target Start/End: Complemental strand, 46991064 - 46990909
Alignment:
Q  52 tcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacattt 148  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| |  ||||||| |||||||||||||||||   |||||||| ||||| |||    
T  46991064 tcactttaattttatcatatatttttgtaggcattatgtcgttctatgctgt--taacttgaatgttgtgagtttgttcgcagattcatcatttacgttt 46990967  T
Q  149 ttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgttttt 206  Q
    |||| |  |||||||||| || ||| |||||||||||||||||||||||||| |||||    
T  46990966 ttagtggcgttgaatgatgtactctatcgatttgaatgaatgaatatcattttttttt 46990909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 189
Target Start/End: Original strand, 47417809 - 47417956
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||  |||||||||||| |||||||| |||||||||||||||| ||||||||| |||||  ||||| ||| |||||||||||||   |||||||||    
T  47417809 atattccattcactttaatttcatcatatatttttgtaggcattatgccgttatatgttatta--acttgaatgctgtgagtttgttcacagattcatcc 47417906  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaat 189  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  47417907 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaat 47417956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 37188543 - 37188390
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||| |||| |||||||||||  ||||||||||| ||||||| |||||   |||    
T  37188543 ccatggatattcctgtcactttaattttatcatataattttgtaggcattgtgtcattatatgctat--taacttggatgctgtgagtgtgttcgcagat 37188446  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaat 189  Q
    | ||| ||| | ||||||||| ||||||||||| ||||||||||||||||||||||    
T  37188445 ttatcttttgcgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaat 37188390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 49410367 - 49410500
Alignment:
Q  40 tgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattca 136  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| |||  ||||||||||| |||||||||||||   ||||||    
T  49410367 tgaatattcctgtcactttaattttatcatatatttttgtaggcattatgccgttatatgttat--taacttggatgatgtgagtttgttcgctgattca 49410464  T
Q  137 tcctttacatttttagcgatgttgaatgatataatc 172  Q
    |||||||| ||||||||| ||||||||||| |||||    
T  49410465 tcctttacgtttttagcggtgttgaatgatgtaatc 49410500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 52097863 - 52097691
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||| |||  ||||||||||||||||||||| ||||   |||    
T  52097863 catggatattccggtcactttaattttatcatatatctttgtaggcattatgacgttatatggtat--taacttggatgttgtgagtttattcgcatatt 52097766  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    || ||||||| ||||||||| | | ||||||| || ||| | ||||||||||||||||||||  |||||||||||    
T  52097765 caccctttacgtttttagcggtatcgaatgatgtactctgttgatttgaatgaatgaatatcgttttgtttttgt 52097691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 18138855 - 18138705
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcgattcatccttta 143  Q
    ||||||| |||||| |||||||||||||| |||||||| ||||||| |||||||||||||  ||||||||||||||||||||||||||     |||||||    
T  18138855 tattccgatcacttaaattttatcatatatttttgtagtcattatgccgttatatgctat--taacttggatgttgtgagtttgttcgcagactccttta 18138758  T
Q  144 catttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    | ||||||||| ||||||||||| || | | | ||||||||||||||||||||    
T  18138757 cgtttttagcggtgttgaatgatgtactttattgatttgaatgaatgaatatc 18138705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 49126068 - 49125918
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcgattcatccttta 143  Q
    ||||||| |||||| |||||||||||||| |||||||| ||||||| |||||||||||||  ||||||||||||||||||||||||||     |||||||    
T  49126068 tattccgatcacttaaattttatcatatatttttgtagtcattatgccgttatatgctat--taacttggatgttgtgagtttgttcgcagactccttta 49125971  T
Q  144 catttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    | ||||||||| ||||||||||| || | | | ||||||||||||||||||||    
T  49125970 cgtttttagcggtgttgaatgatgtactttattgatttgaatgaatgaatatc 49125918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 185
Target Start/End: Complemental strand, 27593777 - 27593629
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||| |||||| |||||||||||||||||||||| ||||||||| |||||| |||||||||||||  |||||||||||||||||||||||||   |||    
T  27593777 ccatgagtattcctgtcactttaattttatcatatatttttgtaggaattatgccgttatatgctat--taacttggatgttgtgagtttgttcatagat 27593680  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaat 185  Q
    |||| |||||  |||| | || ||||||| |||||||||| |||||||||||    
T  27593679 tcat-ctttaagttttcaacggtgttgaacgatataatctatcgatttgaat 27593629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 45 - 195
Target Start/End: Complemental strand, 3336104 - 3335953
Alignment:
Q  45 attccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctt 141  Q
    |||||| ||| |||||||||||||||||  ||||||||||||| | ||||||||||||  |||||||| ||||| |||||||||| |   ||||||||||    
T  3336104 attccgatcattttaattttatcatatatatttgtaggcattacgccgttatatgcta--ataacttgaatgttttgagtttgtttgcagattcatcctt 3336007  T
Q  142 tacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatat 195  Q
    ||| ||||||||| ||||||||||| || ||| | |||||||||||||||||||    
T  3336006 tacgtttttagcggtgttgaatgatgtactctattgatttgaatgaatgaatat 3335953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 38 - 189
Target Start/End: Complemental strand, 35964923 - 35964771
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    ||||| |||| | |||||||||||||||||||||| ||||||||| ||||||| ||||||||||||  |||||||||||||||||| |||||||   | |    
T  35964923 catgagtatttcagtcactttaattttatcatatatttttgtaggaattatgttgttatatgctat--taacttggatgttgtgagattgttcgcaaact 35964826  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaat 189  Q
    ||| |||||| ||||||||| ||||||||| | |  ||| |||||||||||||||    
T  35964825 cattctttacgtttttagcggtgttgaatggtgtcctctatcgatttgaatgaat 35964771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 35261340 - 35261501
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcct 140  Q
    |||| |||||| ||||||||||||| |||  ||||||| |||||||   |||||||||||||  |||||||||||||||||||||| |   |||||||||    
T  35261340 tatttcggtcattttaattttatcagatatgtttgtagacattatgcacttatatgctatta--acttggatgttgtgagtttgtttgcagattcatcct 35261437  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgtttt 205  Q
    |||| |||||||   ||||||||||| || ||  |||||||||||||||||||||||||| ||||    
T  35261438 ttacgtttttagaagtgttgaatgatgtactca-tcgatttgaatgaatgaatatcatttttttt 35261501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 29966534 - 29966631
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||||||||||||||||   ||||||||||||| |||||| |||||||||||||| |||| ||| ||||| ||||||||||||| ||||    
T  29966534 taacttggatgttgtgagtttgttcgcagattcatcctttacgtttttaacgatgttgaatgatgtaatttcttgatttaaatgaatgaatattattt 29966631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 44 - 200
Target Start/End: Complemental strand, 1931692 - 1931535
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcct 140  Q
    |||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||| | || ||||| ||||||||    |||||| |    
T  1931692 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctat--taactttgttgctgtgaatttgttcgcttcttcatctt 1931595  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||| |||| |  || |||||||| |  ||| | |||||||| |||||||||||||||    
T  1931594 ttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatatcattt 1931535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 32952698 - 32952631
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatta 105  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  32952698 catggatattccggtcaatttaattttatcttatatttttgtaggcattatgtcgttatatgctatta 32952631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 56040576 - 56040438
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| ||||||| ||||||||||  ||||||||| |||||||||| |||   ||||| ||||||| |||||||||||||| | ||  ||| |    
T  56040576 tttgtaggcattttgtcgttgtatgctatta--acttggatgctgtgagtttgctcgcagattcaccctttacgtttttagcgatgtttgtatctgatgt 56040479  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  56040478 actctatcgatttgaatgaatgaatatcgttttgtttttgt 56040438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 31381561 - 31381506
Alignment:
Q  139 ctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaata 194  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  31381561 ctttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaacgaata 31381506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 47320342 - 47320205
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaat--gatata 169  Q
    |||||||||||| || |||| ||||||||||  |||||| || ||||||||||||||   |||||| |||||| ||||||||||| |||| |  ||| ||    
T  47320342 tttgtaggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgcagattcattctttacgtttttagcgatcttgattctgatgta 47320245  T
Q  170 atctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
     ||| ||||||||||||||||||||| | |||||||||||    
T  47320244 ttctatcgatttgaatgaatgaatataattttgtttttgt 47320205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 195
Target Start/End: Original strand, 32766693 - 32766817
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||||||||||| ||||||||||  |||||| || |||||||||||||   |||||| ||||| | |||||||||||||| | ||  ||| |    
T  32766693 tttgtaggcattatgtcgttgtatgctatta--acttgggtgctgtgagtttgttctcagattcaccctttgcgtttttagcgatgtttgtatctgatgt 32766790  T
Q  169 aatctctcgatttgaatgaatgaatat 195  Q
    | ||| |||||||||||||||||||||    
T  32766791 actctatcgatttgaatgaatgaatat 32766817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 2520958 - 2521096
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| ||||||||||||||||   |||||| ||||||| |||||||||||| ||| |  ||||      
T  2520958 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatctgatgg 2521055  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  2521056 actctatcgatttgaatgaatgaatatcgttttgtttttgt 2521096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 27360138 - 27360041
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||| ||||||||||||||||   ||| ||  ||||  |||||||||||||| ||||||||| ||| || ||||||| |||||||||||||||    
T  27360138 taacttggacgttgtgagtttgttcgtaaatttattttttatgtttttagcgatgttaaatgatatactctatcaatttgaaagaatgaatatcattt 27360041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 29965782 - 29965828
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatg 89  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  29965782 atattccggtcactttaatttcatcatatatttttgtaggcattatg 29965828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 14183931 - 14183995
Alignment:
Q  25 cagaacctgtgaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgt 90  Q
    ||||||| | ||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||    
T  14183931 cagaaccggagaccatggatattccggtcactttaattttatcaaat-tttttgtaggcattatgt 14183995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 19853478 - 19853304
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| ||||| |||| |||| | |||||||||||  |||  |||||||| || |||| ||||||||||  |||||| |||||||||||||||||   |||    
T  19853478 catggatatttcggtgacttaagttttatcatattatttc-taggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcagatt 19853382  T
Q  135 catcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    || ||||||| |||||| ||||||| | ||  ||| || ||| ||||||||||||||||||||||  |||||||||||    
T  19853381 caccctttacgtttttaacgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 19853304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 206
Target Start/End: Complemental strand, 48257562 - 48257427
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||| ||| || |||| ||||||||||  |||||||| |||||||||||||||   ||||| ||||||| |||||| ||||||| | ||  ||| |    
T  48257562 tttgtaggtattttgccgttgtatgctatta--acttggattttgtgagtttgttcgcagattcaccctttacgtttttaacgatgtttgtatctgatgt 48257465  T
Q  169 aatctctcgatttgaatgaatgaatatcatttgttttt 206  Q
    | ||| |||||||||||||||||||||| ||| |||||    
T  48257464 actctatcgatttgaatgaatgaatatcgtttattttt 48257427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 17949225 - 17949128
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacattttt-agcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc 196  Q
    |||||||| |||||||||||||||||   ||||| ||||||||||||| ||||||||| | ||  |||||| ||| ||||||||||||||||||||||    
T  17949225 taacttgggtgttgtgagtttgttcgcagattcaccctttacattttttagcgatgtttgtatctgatatactctatcgatttgaatgaatgaatatc 17949128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 17953077 - 17952980
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacattttt-agcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc 196  Q
    |||||||| |||||||||||||||||   ||||| ||||||||||||| ||||||||| | ||  |||||| ||| ||||||||||||||||||||||    
T  17953077 taacttgggtgttgtgagtttgttcgcagattcaccctttacattttttagcgatgtttgtatctgatatactctatcgatttgaatgaatgaatatc 17952980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 21365028 - 21364931
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||| || |||||||||||||   | ||||||||| |||||||| |||| ||||||||| |||||| || |||||||| || || ||||||||    
T  21365028 taacttggaagtcgtgagtttgttcgcaaactcatcctttccatttttaacgatcttgaatgatgtaatctatcaatttgaataaacgagtatcattt 21364931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 28857579 - 28857704
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaat--gatat 168  Q
    ||||||||| ||| || | |||||||||||||  ||||||  | ||||||||||||||   ||||||||||||| |||||||||||||||| |  ||| |    
T  28857579 ttttgtaggtattttgcccttatatgctatta--acttggcagctgtgagtttgttcgcagattcatcctttacgtttttagcgatgttgattccgatgt 28857676  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | | | || |||||||||||||||||||    
T  28857677 attatatcaatttgaatgaatgaatatc 28857704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 36184686 - 36184825
Alignment:
Q  50 ggtcactttaattttatcatatact-tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttaca 145  Q
    ||||||||| |||||||||||  || ||| |||||||| ||||||| ||||||||||  |||||||||||||||||||||| |   |   || ||||||     
T  36184686 ggtcactttgattttatcata--ctatttctaggcattttgtcgttgtatgctatta--acttggatgttgtgagtttgtttgtaaaactattctttacg 36184781  T
Q  146 tttttagcgatgttgaatgatataatctctcgatttgaatgaat 189  Q
    |||||||| |||||||||||| || ||| || |||| |||||||    
T  36184782 tttttagcaatgttgaatgatgtactctatcaatttaaatgaat 36184825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 196
Target Start/End: Original strand, 8670693 - 8670783
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    |||||||| |||||||||||  ||||   ||||| | ||||| ||||||||||||||   |||| |||||| ||||||||||||||||||||||    
T  8670693 taacttggctgttgtgagttctttcgcagattcaccttttacgtttttagcgatgtt---tgatgtaatctatcgatttgaatgaatgaatatc 8670783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 31381619 - 31381578
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgt 79  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  31381619 catgaatactccggtcactttaattttatcatatatttttgt 31381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 36194887 - 36194941
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| || |||| ||||||||||  ||||||||||||||||||||||||    
T  36194887 tttgtaggcattttgccgttgtatgctatta--acttggatgttgtgagtttgttcg 36194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 48351092 - 48351037
Alignment:
Q  109 cttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    ||||||||||||||||||||||   |||||||||||||| || |||||||||||||    
T  48351092 cttggatgttgtgagtttgttcaaagattcatcctttacgttattagcgatgttga 48351037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 7273692 - 7273610
Alignment:
Q  117 ttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    |||||||||||||||   ||| ||| ||||| |||||| || |||||||| ||||| ||| || |||||||||||||||||||    
T  7273692 ttgtgagtttgttcgcagatttatcatttacgtttttaacggtgttgaataatatactctatcaatttgaatgaatgaatatc 7273610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 31891217 - 31891130
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga 161  Q
    |||||||||||| || |||| ||||||||||  |||||| |||||||||||||||||   ||||| ||| ||| ||||||||||| ||||    
T  31891217 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcaaattcaccctatacgtttttagcgatattga 31891130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 36161890 - 36161977
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    ||||||||||||  ||||||||||| |||||  |||||| ||||||||||||||||   ||||||  |||||| |||||| |||||||||    
T  36161890 tttgtaggcatttggtcgttatatgttatta--acttgggtgttgtgagtttgttcacagattcactctttacgtttttaacgatgttga 36161977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 43853651 - 43853709
Alignment:
Q  106 taacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    |||||||||||||||||||||||||   |||| | | ||||||||||||||||||||||    
T  43853651 taacttggatgttgtgagtttgttcgcagattaaccatttacatttttagcgatgttga 43853709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 36204276 - 36204172
Alignment:
Q  110 ttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga--atgatataatctctcgatttgaatgaatgaatatc-atttgtt 203  Q
    |||||||||||||||||||||   |||||| ||||||  ||||||||||||||||   |||| || ||| || ||||||||||| |||||||  ||||||    
T  36204276 ttggatgttgtgagtttgttcacagattcaccctttatgtttttagcgatgttgattctgatgtattctgtcaatttgaatgaaagaatatcgttttgtt 36204177  T
Q  204 tttgt 208  Q
    |||||    
T  36204176 tttgt 36204172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 24736227 - 24736166
Alignment:
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    |||||||||||||||||||| || |||||| ||   |||||  ||||||||||||||||||||||    
T  24736227 attcatcctttacatttttaacggtgttgattg---taatccttcgatttgaatgaatgaatatc 24736166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 35348486 - 35348571
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| || | || ||||||||||  |||||| ||||||||||||||| |   ||||| ||||||| ||||||||||||||    
T  35348486 tttgtaggcattttgccattttatgctatta--acttgggtgttgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 35348571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 51888112 - 51888013
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaat--gatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||| | |||||||||||||||||   || || ||||||||||||||| ||| |||| |  |||||| ||| || |||||||||||||||| ||||||    
T  51888112 taacttaggtgttgtgagtttgttcgcatatccaccctttacatttttagtgatcttgattctgatatattctatcaatttgaatgaatgaatgtcattt 51888013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 158
Target Start/End: Original strand, 53811171 - 53811290
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    ||||| |||| |||| |||| | |||||||||||  ||| ||||||||| || |||| ||||||||||  |||||| ||||||||||| |||||   |||    
T  53811171 catgagtatttcggtgacttaagttttatcatattattt-gtaggcattttggcgttgtatgctatta--acttgggtgttgtgagtt-gttcgcagatt 53811266  T
Q  135 catcctttacatttttagcgatgt 158  Q
    || ||||||| |||||||||||||    
T  53811267 caccctttacgtttttagcgatgt 53811290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 7273743 - 7273710
Alignment:
Q  56 tttaattttatcatatacttttgtaggcattatg 89  Q
    ||||||||||||||||| ||||||||||||||||    
T  7273743 tttaattttatcatatatttttgtaggcattatg 7273710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 22038710 - 22038655
Alignment:
Q  106 taacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgt 158  Q
    |||||||||||||||||||||||||   |||| | ||||||| |||||||||||||    
T  22038710 taacttggatgttgtgagtttgttcgtagatttaccctttacgtttttagcgatgt 22038655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 208
Target Start/End: Complemental strand, 26633565 - 26633463
Alignment:
Q  113 gatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc-atttgtttt 205  Q
    |||||||||||||||||||   ||||| ||||||| ||||||| |||||| | ||  ||| || ||| ||||||||||||||||||||||  ||||||||    
T  26633565 gatgttgtgagtttgttcgcagattcaccctttacgtttttagtgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttt 26633466  T
Q  206 tgt 208  Q
    |||    
T  26633465 tgt 26633463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 28834197 - 28834164
Alignment:
Q  38 catgaatattccggtcactttaattttatcatat 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  28834197 catgactattccggtcactttaattttatcatat 28834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 33921233 - 33921287
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| | | ||| ||||||||||  ||||||||||||||||||||||||    
T  33921233 tttgtaggcattgtatagttgtatgctatta--acttggatgttgtgagtttgttcg 33921287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 43095793 - 43095892
Alignment:
Q  60 attttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgat 156  Q
    |||||||||||| | |||||||| ||| ||| ||| ||||||||||  | ||||||| |||||||||||||   |||||||| ||||| ||||||| |||    
T  43095793 attttatcatat-catttgtaggtattttgtagttgtatgctatta--atttggatgatgtgagtttgttcgcagattcatcatttacgtttttagggat 43095889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 4142653 - 4142556
Alignment:
Q  118 tgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    ||||||||||||||   ||||| |||||||||||||||| ||||| | ||  ||| || ||| ||||||||||||||||||||||  |||||||||||    
T  4142653 tgtgagtttgttcgcagattcaccctttacatttttagcaatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 4142556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 8009311 - 8009275
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatat 71  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  8009311 gaccatggatattccgatcactttaattttatcatat 8009275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 13634323 - 13634432
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatca-t 198  Q
    |||||||| || ||||| ||||||||   ||||| |||||||  ||||||||||||| | ||  ||| || ||| ||||||||||||||||||||||| |    
T  13634323 taacttgggtgctgtgaatttgttcggagattcaccctttacgcttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcatt 13634422  T
Q  199 ttgtttttgt 208  Q
    ||||||||||    
T  13634423 ttgtttttgt 13634432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 21686143 - 21686034
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc-at 198  Q
    |||||||| || ||||||||||||||   ||||| ||||||| ||| |||||||||| | ||  ||| || ||| ||||||||||||||||||||||  |    
T  21686143 taacttgggtgctgtgagtttgttcgcatattcaccctttacgtttgtagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtt 21686044  T
Q  199 ttgtttttgt 208  Q
    ||||||||||    
T  21686043 ttgtttttgt 21686034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 22301048 - 22301099
Alignment:
Q  94 tatatgctattataacttggatgttgtgagtttgttc---gattcatcctttac 144  Q
    ||||||||||||  |||||||||||||||||||||||   ||||||||||||||    
T  22301048 tatatgctatta--acttggatgttgtgagtttgttcgcagattcatcctttac 22301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 37 - 199
Target Start/End: Original strand, 43148858 - 43149021
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||   ||    
T  43148858 ccatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgttgtgagtttgttcgcagat 43148955  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatt 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43148956 tcatcctttacatttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcatt 43149021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 21060231 - 21060058
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |  ||||||||||||||||| ||||||   ||    
T  21060231 ccatggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatattctatca--acttggatgttgtgagtatgttcgtagat 21060134  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  21060133 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 21060058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 7247090 - 7247254
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||   ||    
T  7247090 ccatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgctgtgagtttgttcgcagat 7247187  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  7247188 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 7247254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 3271352 - 3271177
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---g 131  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||| |||||||||||   |    
T  3271352 gaccatggatattccgatcactttaattttatcatatatttttgtaagcattatgtcgttatatgctat--taacttggatgttatgagtttgttcgcag 3271255  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  3271254 attcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgattatcattttgtttttgt 3271177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 4954123 - 4954285
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||| ||||||||||||||||||    ||    
T  4954123 ccatgaatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taactttgatgttgtgagtttgttcacatat 4954220  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcat 198  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| ||||||||    
T  4954221 tcatcctttacatttttagcggtgttgaacgatgtaatctctcgatttgaatgaataaatatcat 4954285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 18677415 - 18677250
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---g 131  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  |||||||||||||||| ||||||||   |    
T  18677415 gaccatggatattccggtcactttaattttatcatatatttttgtaagcattatgccgttatatgctat--taacttggatgttgtgtgtttgttcgcag 18677318  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  18677317 attcatcc-ttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 18677250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 781519 - 781692
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||  ||||||||||||||||| | ||||   ||    
T  781519 ccatggatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctatta--acttggatgttgtgagtatattcgcagat 781616  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||| || ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  781617 tcatccttcacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 781692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 7241914 - 7242079
Alignment:
Q  37 ccatgaatattccggtc-actttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---a 132  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||   |    
T  7241914 ccatggatattccggttgactttaattttatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgctgtgagtttgttcgcaga 7242011  T
Q  133 ttcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  7242012 ttcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 7242079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 20257637 - 20257484
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||| |||||||||||||   |||||||| |    
T  20257637 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgttat--taacttggatgatgtgagtttgttcacagattcatcat 20257540  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20257539 ttacgtttttagcgatgttgaatgatataatctatcgatttgaattaatgaatatc 20257484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 27266806 - 27266634
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||||||| |||||||||||||   ||||    
T  27266806 catggatattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctat--taacttggatgctgtgagtttgttcgcagatt 27266709  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||| || |||||||||||    
T  27266708 catcatttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaacgaataccattttgtttttgt 27266634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 35475286 - 35475122
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||||||||| ||||||   ||    
T  35475286 ccatggatattccagtcactttaattttatcatatatttttgtaggcataacgtcgttatatgctatta--acttggatgttgtgagtatgttcgtatat 35475189  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  35475188 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcattt 35475122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 19259760 - 19259587
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||   |||    
T  19259760 ccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgctgtgagtttgttcgcagat 19259663  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    | || |||||| ||||||||||||||||| ||| ||||||||||||||||||| || ||||||| |||||||||||    
T  19259662 ttattctttacgtttttagcgatgttgaacgatgtaatctctcgatttgaatggataaatatcattttgtttttgt 19259587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 34881849 - 34882021
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |   ||    
T  34881849 ccatggatattccg-tcactttaattatatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgttgtgagtttgtttgcagat 34881945  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  34881946 tcatcctttatgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 34882021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 30298975 - 30299139
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||||| ||||| |||||   |||    
T  30298975 ccatggatattctggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgttctgagtatgttcgcagat 30299072  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||    
T  30299073 tcatcctttacgtttttagcggtgttgaatgatttaatatctcgatttaaatgaatgaatatcattt 30299139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 27752062 - 27752229
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  | |||||||||||||  ||||||||| ||||||| ||||||   |||||||     
T  27752062 atattccggtcactttaattttatcatatatttttgtaggcattataccattatatgctatta--acttggatgctgtgagtatgttcgtagattcatct 27752159  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt-gtttttgt 208  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  27752160 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcatttcgtttttgt 27752229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 37 - 195
Target Start/End: Original strand, 42580019 - 42580178
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||  |||||| |||||||||||||||  ||||| ||| ||||||||||||    |||    
T  42580019 ccatgaatattccggtcactttaattttatcatatatttttgcagatattatgccgttatatgctatta--acttgaatgctgtgagtttgtttatagat 42580116  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatat 195  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  42580117 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 42580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 7150285 - 7150119
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg--- 131  Q
    ||||||| ||||| |||| ||||||||||||||||||| |||||||| ||||||| |||||||||||||||  | ||||||| ||||||||||||||       
T  7150285 gaccatggatatttcggtgactttaattttatcatatatttttgtagtcattatgccgttatatgctatta--atttggatgctgtgagtttgttcgcag 7150188  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||  | |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7150187 atttgttctttacgtttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattt 7150119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 16981422 - 16981587
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatac--ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---a 132  Q
    |||| |||||||||| |||||||||||||||||||   ||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||   |    
T  16981422 catggatattccggtgactttaattttatcatatatatttttgtaggcattatatcgttatatgctatta--acttggatgttgtgagtttgttcgcaga 16981519  T
Q  133 ttcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| |||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  16981520 ttcattctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaataaatgaatatcattt 16981587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 15571045 - 15571198
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||   |||||||||     
T  15571045 tattccagtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgttgtgagtttgttcgcagattcatcca 15571142  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    |||  ||||||| | ||||||||||| |||||| | ||||||||||||||||||||    
T  15571143 ttatgtttttagtggtgttgaatgatgtaatctatggatttgaatgaatgaatatc 15571198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 41184388 - 41184216
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||||| |||||||||||||||||||||| |||||  ||||||||| |||||||||||||  ||||||||||| |||||||||||||   |||    
T  41184388 ccatggatattccagtcactttaattttatcatatatttttgccggcattatgccgttatatgctat--taacttggatgctgtgagtttgttcgcagat 41184291  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  41184290 tcatcctttacgtttttagcggtgtt-aatgatgtaatctctcgatttgaatgaatgcatatcattttgtttttgt 41184216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 10649775 - 10649937
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |  |||||||||||||||  |||||   ||    
T  10649775 ccatggatattccggtcactttaattttatcatatgtttttgtaggcattatgccgttatatggtattaaa--ttggatgttgtgagt--gttcgcagat 10649870  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  10649871 tcatcatttacgtttttaacggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 10649937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 30298338 - 30298513
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatat--gctattataacttggatgttgtgagtttgttcg--- 131  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||  |||||||  |||||||  ||||||||||||||||| ||||||       
T  30298338 ccatggatattccggccactttaattttatcatatatttttgtaggcattatgctgttatatatgctatta--acttggatgttgtgagtatgttcgcag 30298435  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||| |||||| ||||||||| |||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||    
T  30298436 attcattctttacgtttttagcggtgttgaatgatatagtctctcgatttaaataaatgaatatcattttgtttttgt 30298513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 43008238 - 43008090
Alignment:
Q  62 tttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgt 158  Q
    ||||||||||| |||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||    ||| ||||||||| ||||||| | |||    
T  43008238 tttatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgttatgagtttgttctcaaatttatcctttacgtttttagtggtgt 43008141  T
Q  159 tgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||    
T  43008140 tgaatgatgtaatctctcgatttgaatgaatgaatattattttgtttttgt 43008090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 11768143 - 11768290
Alignment:
Q  50 ggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacat 146  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||  |||||||| |||||||||||||   |||||||||| ||| |    
T  11768143 ggtcactttaattttatcatatatttttgtagccattatgccgttatatgctattat--cttggatgatgtgagtttgttcgcagattcatcctatacgt 11768240  T
Q  147 ttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    ||||||||||||||||| || |||  | ||||||| ||||||||||||||    
T  11768241 ttttagcgatgttgaataatgtaacatatcgattttaatgaatgaatatc 11768290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 2057786 - 2057618
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  |  |||||| ||||||||||||||  |||   ||    
T  2057786 ccatggatattccggtcactataattttatcatatatttttgtaggcattatgtcgttatatgcagt--taacttagatgttgtgagttt-ctcgcacat 2057690  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctc-----tcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||| ||||||||||| || ||||     | ||||||||||||||||||||||||    
T  2057689 tcatcctttacgtttttagcggtgttgaatgatgtattctcttaatttgatttgaatgaatgaatatcattt 2057618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 19280887 - 19280721
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt----- 134  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||||||||||||   ||||         
T  19280887 atattccggtgactttaatattatcatatatttttgtaggcattatg-cgttatatgctat--taacttggatgttgtgagtttgttcgcagatttatca 19280791  T
Q  135 ----catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
         ||||||||  ||||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  19280790 tttatatcctttatgtttttagcggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattt 19280721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 7886885 - 7886715
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| |||||||||||||| || |||||||||||  |||||||||||||||   ||||||||||||||  ||||||||  |||||||||||||   ||||    
T  7886885 catggatattccggtcactatagttttatcatatt-ttttgtaggcattattctgttatatgctatta--acttggatactgtgagtttgttcacagatt 7886789  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    |||| ||||| || |||||| ||||||||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  7886788 catcttttacgttcttagcggtgttgaatgatgtaatctctc-atttgaatgaatgaatatcgttttgtttttgt 7886715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 28235716 - 28235884
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatat--gctattataacttggatgttgtgagtttgttcg--- 131  Q
    ||||| ||||| || ||||||||||||||||||||| |||||||||||||||| ||||||||  |||||||  ||||||||||||||||||||||||       
T  28235716 ccatggatatttcgatcactttaattttatcatatatttttgtaggcattatgccgttatatatgctatta--acttggatgttgtgagtttgttcgcag 28235813  T
Q  132 attcatcctttacatttttagcgat---gttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||| |||||||||| |||| |   ||||||||||  |||||||| ||||  |||||||||||||||||    
T  28235814 attcatcatttacatttt-agcggtattgttgaatgatgcaatctctcaatttatatgaatgaatatcattt 28235884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 7612986 - 7612876
Alignment:
Q  57 ttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagc 153  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||  ||| ||| ||||||||||||||||||   ||||||| ||||| ||||||||    
T  7612986 ttaattttatcatatatttttgtaggcattatgtcgttctatgctat--taaattgaatgttgtgagtttgttcgcaaattcatcttttacgtttttagc 7612889  T
Q  154 gatgttgaatgat 166  Q
    | |||||||||||    
T  7612888 ggtgttgaatgat 7612876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 8772062 - 8771965
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| | |||||||||| |   ||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||    
T  8772062 taacttggatgctatgagtttgtttgcaaattcatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 8771965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 42886616 - 42886696
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagttt 126  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||| |||||||||||||  ||||||| |||||||||||||    
T  42886616 tattccggtcaatttaattttataatatatttttgtaggcattatgccgttatatgctat--taacttgaatgttgtgagttt 42886696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 26578385 - 26578451
Alignment:
Q  39 atgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatta 105  Q
    ||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||    
T  26578385 atgaatatttcggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctatta 26578451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 43261766 - 43261704
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgc 100  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  43261766 catggatattccggtcactttaatgttatcatatatttttgtaggcattatgtcgttatatgc 43261704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 10332478 - 10332354
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga--atgatat 168  Q
    ||||||||||||| |||| |||||||||||||  |||||| || |||||||||||||   |||||||||||||| ||||||||||||||||   |||| |    
T  10332478 ttttgtaggcattttgtctttatatgctatta--acttgggtgatgtgagtttgttcacagattcatcctttacgtttttagcgatgttgattctgatgt 10332381  T
Q  169 aatctctcgatttgaatgaatgaatat 195  Q
    | ||| || ||||||||||||| ||||    
T  10332380 attctatcaatttgaatgaatggatat 10332354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 208
Target Start/End: Complemental strand, 22978865 - 22978700
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcct 140  Q
    |||| |||||||||| ||||||| | ||| |||||||| ||||||| |||||||||||||  ||  ||||||| | | ||||| ||||   |||||||||    
T  22978865 tatttcggtcactttcattttataaaatatttttgtagccattatgccgttatatgctat--tagtttggatgatttaagtttattcgcaaattcatcct 22978768  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    |||| || |||||  ||||||||||| || | | |||||| ||||||||||||||| ||| |||||||    
T  22978767 ttacgttattagcagtgttgaatgatgtactttatcgattagaatgaatgaatatcgtttatttttgt 22978700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 30371847 - 30371925
Alignment:
Q  131 gattcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||| |||| ||||||||| |||| |||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  30371847 gattcatcccttacgtttttagcggtgtttaatgatgtaatctctctatttgaatgaatgaatatcattttgtttttgt 30371925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 41418669 - 41418605
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgcta 102  Q
    |||| |||||||| ||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  41418669 catggatattccgctcactttaattttatcatatatttttgtggacattatgtcgttatatgcta 41418605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 11976836 - 11976736
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatataatctctcgatttgaatgaatgaatatcatt 199  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||| |  |||| |||||| || |||| ||||||| |||||||||    
T  11976836 taacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcgatgtttgcatctgatgtaatctatcaattttaatgaattaatatcatt 11976737  T
Q  200 t 200  Q
    |    
T  11976736 t 11976736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 13422093 - 13422228
Alignment:
Q  77 tgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgt---tgaatgatataa 170  Q
    |||||||||| |  |||| ||||||||||  ||||||||||||||||||||||||   ||||||||||||| |||||||||||||   |  ||||| | |    
T  13422093 tgtaggcatttttccgttttatgctatta--acttggatgttgtgagtttgttcgcatattcatcctttacgtttttagcgatgtttgtatatgatgt-a 13422189  T
Q  171 tctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||| || |||||||||||||||||||| |||||||||||    
T  13422190 tctatcaatttgaatgaatgaatatcattttgtttttgt 13422228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 25980315 - 25980440
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||||||||||||||  |||||| || |||||||||||| |   ||||| ||||||| |||||||||||||| | ||  |||||    
T  25980315 tttgtaggcattttgccgttatatgctatta--acttgggtgatgtgagtttgtttgcagattcaccctttacgtttttagcgatgtttgcatctgatat 25980412  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  25980413 actctatcgatttgaatgaatgaatatc 25980440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 37483274 - 37483331
Alignment:
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaat 189  Q
    ||||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||    
T  37483274 attcatcctttatgtttttagcgatgttgaatgatgtaatctatcgatttgaatgaat 37483331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 2979236 - 2979149
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    |||||||||||| || |||| ||||||||||  |||||||||||||||||||||||   |||||| ||| ||||||||||||||| ||||    
T  2979236 tttgtaggcattgtgccgttgtatgctatta--acttggatgttgtgagtttgttcgcagattcaccctatacatttttagcgatattga 2979149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 14726391 - 14726253
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| ||||||| |||  |||||  ||||||||| |||||||||||||   |||||| ||||||| ||||||| |||||| | ||  ||| |    
T  14726391 tttgtaggcattttgtcgttttataatatta--acttggatgctgtgagtttgttcacagattcaccctttacgtttttagtgatgtttgtatctgatgt 14726294  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    ||||| ||||||||||||||||||||||  |||||||||||    
T  14726293 aatctatcgatttgaatgaatgaatatcgttttgtttttgt 14726253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 26825588 - 26825713
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||| ||||||| |||||||| ||||| | ||  |||||    
T  26825588 tttgtaggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtttgtatttgatat 26825685  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  26825686 actctatcgatttgaatgaatgaatatc 26825713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 8984916 - 8984861
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    ||||||||||||| ||||||||||| ||||||  ||||||||||||||||||||||||    
T  8984916 ttttgtaggcattttgtcgttatatactatta--acttggatgttgtgagtttgttcg 8984861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 34945555 - 34945636
Alignment:
Q  79 taggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    |||||||| ||||||| ||||||||||  |||||| ||||||||||||||||   |||||| ||||||| ||||||||||||||    
T  34945555 taggcattttgtcgttgtatgctatta--acttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 34945636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 38597955 - 38598040
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| || |||| ||||||||||  |||||| |||||||||||||||||   ||||| ||||||| ||||||||||||||    
T  38597955 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcaaattcaccctttacgtttttagcgatgtt 38598040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 8096428 - 8096304
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaat-gatata 169  Q
    |||||||||||| || | || ||||||||||  |||||| || ||||||||||||||   ||||| |||||||||||||||||||| ||| ||  || ||    
T  8096428 tttgtaggcattttgccattttatgctatta--acttgggtggtgtgagtttgttcgcaaattcaccctttacatttttagcgatgtttgtatctatgta 8096331  T
Q  170 atctctcgatttgaatgaatgaatatc 196  Q
     ||| ||||||||||||||||||||||    
T  8096330 ctctatcgatttgaatgaatgaatatc 8096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 24229714 - 24229576
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga---atgatat 168  Q
    |||||||||||| || |||| ||||||||  |||||||| || |||||||||||||   ||||||  |||||| |||||||||||||| |    |||| |    
T  24229714 tttgtaggcattttgccgttgtatgctat--taacttgggtgctgtgagtttgttcgcagattcactctttacgtttttagcgatgtttatatctgatgt 24229617  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  24229616 actctatcgatttgaatgaatgaatatcgttttgtttttgt 24229576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 9113655 - 9113517
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| |  |||| ||||||||||  |||||| |||| ||||||||||||   ||||| ||||||| |||||||||||||| | ||  ||| |    
T  9113655 tttgtaggcatttttccgttgtatgctatta--acttgggtgttctgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatctgatgt 9113558  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  9113557 actctatcgatttgaatgaatgaatatcgttttgtttttgt 9113517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 8088142 - 8088005
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaat--gatata 169  Q
    |||||||||||| || | || ||||||||||  |||||| |||| ||||||||||||   ||||||| ||||| |||||||| || ||||||  |||  |    
T  8088142 tttgtaggcattttgcctttgtatgctatta--acttgggtgttatgagtttgttcgcagattcatcttttacctttttagcaatcttgaatctgatgca 8088045  T
Q  170 atctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
     ||| || |||||||||||||||||||| |||||||||||    
T  8088044 ttctatcaatttgaatgaatgaatatcattttgtttttgt 8088005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 13468744 - 13468887
Alignment:
Q  52 tcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacattt 148  Q
    |||||||| |||||||||||  | | ||||||||| |||||| |||||||||  |||||| ||| |||||||||||||||   ||||||| ||||  |||    
T  13468744 tcactttagttttatcatattatgt-gtaggcattttgtcgtcatatgctat--taactttgattttgtgagtttgttcgtaaattcatcatttatgttt 13468840  T
Q  149 ttagcgatgttgaatgatataatctctcgatttgaatgaatgaatat 195  Q
    ||||  |||||||||| | || | | | ||||||| |||||||||||    
T  13468841 ttagatatgttgaatggtgtactttattgatttgattgaatgaatat 13468887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 6012068 - 6011930
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| |  |||| ||||||||||  |||||| || ||||||||||||||   ||||| ||||||| |||||| ||||||| | ||  ||| |    
T  6012068 tttgtaggcattctaccgttttatgctatta--acttgggtgatgtgagtttgttcgcagattcaccctttacgtttttaacgatgtttgtatctgatgt 6011971  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  6011970 actctatcgatttgaatgaatgaatatcgttttgtttttgt 6011930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 13007387 - 13007525
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| || |||||||||||| |   ||||| ||||||| |||||||||||| ||| |  |||| |    
T  13007387 tttgtaggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcgatgtttgtatttgatgt 13007484  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| || |||||||||||||||||||  |||||||||||    
T  13007485 actctatcaatttgaatgaatgaatatcgttttgtttttgt 13007525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 36057201 - 36057112
Alignment:
Q  114 atgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||||||||   ||| ||| ||||| ||||||  |||||| ||| || || | | ||||||||||||||||||||||||||    
T  36057201 atgttgtgagtttgttcgcagatttatcatttacgtttttaatgatgttaaataatgtattatatcgatttgaatgaatgaatatcattt 36057112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 14082326 - 14082241
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| ||||||| ||||||||  |||||| |||| || ||||||||||   |||||| ||||||  ||||||||||||||    
T  14082326 tttgtaggcattttgtcgttgtatgctat--taacttcgatgatgggagtttgttcgcagattcaccctttatgtttttagcgatgtt 14082241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 26878010 - 26877962
Alignment:
Q  106 taacttggatgttgtgagtttgttc---gattcatcctttacattttta 151  Q
    |||||||||||||||||||||||||   |||||||||||||| ||||||    
T  26878010 taacttggatgttgtgagtttgttcgcagattcatcctttacgttttta 26877962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 35851047 - 35851093
Alignment:
Q  163 tgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||    
T  35851047 tgatataatctattgatttgaatgaatgaatatcattttgtttttgt 35851093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 19645736 - 19645703
Alignment:
Q  175 tcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    |||||||||||||||||||||||||| |||||||    
T  19645736 tcgatttgaatgaatgaatatcatttatttttgt 19645703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 195
Target Start/End: Complemental strand, 27576290 - 27576174
Alignment:
Q  76 ttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattca-tcctttacatttttagcgatgttgaatgatataat 171  Q
    |||||||||||||||| |||||||||||  ||| ||||||||| |||||||||||   | |||| |  ||| |||||||| ||||||||||||    | |    
T  27576290 ttgtaggcattatgtctttatatgctat--taagttggatgtt-tgagtttgttcgtagcttcattttttttcatttttatcgatgttgaatg----act 27576198  T
Q  172 ctctcgatttgaatgaatgaatat 195  Q
    || |||||||||||||||||||||    
T  27576197 ctatcgatttgaatgaatgaatat 27576174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 6446004 - 6446036
Alignment:
Q  38 catgaatattccggtcactttaattttatcata 70  Q
    |||| ||||||||||||||||||||||||||||    
T  6446004 catggatattccggtcactttaattttatcata 6446036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 38007544 - 38007653
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc-at 198  Q
    |||||||| || |||||||||||||    ||||| | ||||| |||||||||||||| | ||  ||| |||||| ||||||||||||||||||||||  |    
T  38007544 taacttgggtgctgtgagtttgttcacatattcaccttttacgtttttagcgatgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgtt 38007643  T
Q  199 ttgtttttgt 208  Q
    ||||||||||    
T  38007644 ttgtttttgt 38007653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 4e-62; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 25162568 - 25162735
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||   |||||||||    
T  25162568 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgttgtgagtttgttcgcggattcatcc 25162665  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  25162666 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 25162735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 25631474 - 25631310
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||  ||||||||| ||||||||||||||   ||    
T  25631474 ccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgttatta--acttggatgatgtgagtttgttcgcagat 25631377  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  25631376 tcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 25631310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 41 - 208
Target Start/End: Complemental strand, 44907343 - 44907174
Alignment:
Q  41 gaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcat 137  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||   |||||||    
T  44907343 gaatattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctat--taatttggatgttgtgagtttgttcgcagattcat 44907246  T
Q  138 cctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  44907245 cctttacgtttttagcgttgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttgtttttgt 44907174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 200
Target Start/End: Original strand, 12116238 - 12116388
Alignment:
Q  51 gtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatt 147  Q
    ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||   |||||||||||||| ||    
T  12116238 gtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgttgtgagtttgttcttagattcatcctttacgtt 12116335  T
Q  148 tttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12116336 tttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 12116388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 46934769 - 46934929
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||  ||||||||||||||||||||||||   |||    
T  46934769 catggatattccggtcactttaattttatcatatatttttgtaggcat---gtcgttatatgctatta--acttggatgttgtgagtttgttcgtagatt 46934863  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  46934864 catcctttacgtttttagcgatgttgaatgatgcaatctctcgatttgaatgaatgaatatcattt 46934929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 32607597 - 32607768
Alignment:
Q  39 atgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attc 135  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||||| | |||||||||||||  || |||||||||||||||||||||   ||||    
T  32607597 atgaatattccgatcactttaatttcatcatatatttttgtaggcattatgccattatatgctatta--acctggatgttgtgagtttgttcgcagattc 32607694  T
Q  136 atcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  32607695 atcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 32607768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 36906254 - 36906412
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||   ||||||||    
T  36906254 atattccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgatgtgagtttgttcgcagattcatcc 36906351  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  36906352 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 36906412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 17237937 - 17238104
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||   ||||| |||    
T  17237937 atattccggtcactttaattttattatatatttttgtaggcattatgtcgttatatgctat--taacttggatgatgtgagtttgttcgctgattcttcc 17238034  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| ||||||||||| |||| |||| |||||||||||||||||||| |||||||||||    
T  17238035 tttacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatatcattttgtttttgt 17238104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 29503587 - 29503760
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||  ||||||| ||||||   ||    
T  29503587 ccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggattctgtgagtatgttcgcatat 29503684  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||||||||||||| |||||||| || |||||| | ||||||||||||||||||||| |||||||||||    
T  29503685 tcatcctttacatttttagcggtgttgaataatgtaatctattgatttgaatgaatgaatatcattttgtttttgt 29503760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 37 - 195
Target Start/End: Complemental strand, 30648667 - 30648508
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||||||||| |||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||  |||||||||||||||||||||||||   |||    
T  30648667 ccatgaatatttcggtaactttaattttatcatatatttttataggcaatatgtcgttatatgctat--taacttggatgttgtgagtttgttcgcagat 30648570  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatat 195  Q
    ||||||||||  ||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  30648569 tcatcctttatgtttttagcggtgttgaattatgtaatctctcgatttgaatgaatgaatat 30648508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 43 - 196
Target Start/End: Complemental strand, 3848861 - 3848707
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||| || ||||||||||||  ||||||||| ||||||||||||||   ||||||||    
T  3848861 atattccggtgactttaattttatcatatatatttgtaggcattatgccgctatatgctatta--acttggatgctgtgagtttgttcgcagattcatcc 3848764  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3848763 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatc 3848707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 4178691 - 4178864
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||||  ||||||||| ||   ||||||||   |||    
T  4178691 ccatggatattccggtcactttaattttatcatatatttttctaggcattatgctgttatatgctatta--acttggatgatgcatgtttgttcatagat 4178788  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  4178789 tcatcctttacgtttttagcagtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 4178864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 35499140 - 35498984
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||| |||||||||||| |||||||| ||||||  ||||||||||||||||||||||||  | ||||||||||| ||||| ||||   ||||||||    
T  35499140 atattccgatcactttaatttcatcatatatttttgt--gcattatgtcgttatatgctatta--atttggatgttgtaagttttttcgcagattcatcc 35499045  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||    
T  35499044 tttacgtttttagcggtgttgaatgatgtaatccctcgatttgaatgaatgaatatcattt 35498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 39917345 - 39917183
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||||| | |||||||||||  ||||||||||||||||||||| |||   ||||    
T  39917345 catggatattccagtcactttaattttatcatatatttttgtaggcattatgcctttatatgctat--taacttggatgttgtgagtttattcacagatt 39917248  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||| ||||||| | ||||||||||| ||||||||| |||| |||||| |||||||||||    
T  39917247 catcctttacgtttttagaggtgttgaatgat-taatctctcaattttaatgaaagaatatcattt 39917183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 197
Target Start/End: Original strand, 22803163 - 22803317
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    ||||||| |||||||||||||||||| || |||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||    ||| |||||    
T  22803163 tattccgatcactttaattttatcatgtatttttgtaggcattatgccgttatatgctat--taacttggatgctgtgagtttgttcacaaatttatcct 22803260  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca 197  Q
    |||| ||||||||||||||||||||| ||| || ||||||| |||||||||||||||    
T  22803261 ttacgtttttagcgatgttgaatgatgtaacctatcgatttaaatgaatgaatatca 22803317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 50611366 - 50611193
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||| |||||||| |||||||||||||  |||||||||||||||   ||||||||||||||  ||||||||| | || |||||||||   ||    
T  50611366 ccatggatattcgggtcacttaaattttatcatatgtttttgtaggcattatacagttatatgctatta--acttggatgatatgggtttgttcgcagat 50611269  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  50611268 tcatcctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttgtttttgt 50611193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 49552172 - 49552008
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||||| |||||| |||||||||||| |||||||||||||||| |||||||||||||  ||||||||||| ||| |||||||||   |||    
T  49552172 ccatggatattccggtgactttagttttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgctgtaagtttgttcgcagat 49552075  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||  ||||||||||| |||| |   ||||||||||||||||||||||||    
T  49552074 tcatcctttacgtttttagcagtgttgaatgatgtaattttatgatttgaatgaatgaatatcattt 49552008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 208
Target Start/End: Original strand, 46178701 - 46178867
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||   | || ||| |    
T  46178701 tattccggtcacttttattttatcatatatttttgtaagcattatgtcgttatatgctat--taacttggatgatgtgagtttgttcgcagttttatctt 46178798  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    |||| |||||| || |||||||||||||||| | |||||||||||||||||| |||  |||||||||||    
T  46178799 ttacgtttttaacggtgttgaatgatataatatatcgatttgaatgaatgaaaatcgttttgtttttgt 46178867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 21916598 - 21916757
Alignment:
Q  36 accatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---ga 132  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||  |||||| |  | ||||||||||  ||||||||| |||||||||||||   ||    
T  21916598 accatggatatttcggtcactttaattttatcatatatttttgtagatattatgcccctgtatgctatta--acttggatgatgtgagtttgttctcaga 21916695  T
Q  133 ttcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaata 194  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||||| || ||||||||    
T  21916696 ttcatcctttacatttttagcggtgttgaatgatgtaatatctcgatttggataaatgaata 21916757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 38854978 - 38854814
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||  ||||||||| |||  ||||||||||| ||||||||| ||||   ||||||||    
T  38854978 atattccgggcactttaattttatcatatatttttgtagtcattataccgttatatgttat--taacttggatgatgtgagttttttcgcatattcatcc 38854881  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||   | |||||||  |||||||||||||||||||||||||||||| |||||||||||    
T  38854880 tttacgtttttagc---ggtgaatgacgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 38854814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 38440497 - 38440375
Alignment:
Q  79 taggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctct 175  Q
    |||||||||||  ||||||||||||||  ||||||||| |||||||||| |||   ||||||||||||| ||||||||| ||||||||||| |||||| |    
T  38440497 taggcattatgctgttatatgctatta--acttggatgctgtgagtttgctcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatcttt 38440400  T
Q  176 cgatttgaatgaatgaatatcattt 200  Q
    |||||||||||||||||||||||||    
T  38440399 cgatttgaatgaatgaatatcattt 38440375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 51202200 - 51202039
Alignment:
Q  39 atgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attc 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||            ||||||||| ||||||||||||||   ||||    
T  51202200 atgaatatcccggtcactttaattttatcatatatttttgtaggcattatgtcgtta------------acttggatgctgtgagtttgttcgcagattc 51202113  T
Q  136 atcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||| ||||| ||||||||| || | ||| || |||||||||||||||||||||| ||||||| |||||||||||    
T  51202112 atcatttacgtttttagcggtgataaataatgtaatctctcgatttgaatgaataaatatcattttgtttttgt 51202039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 37169374 - 37169512
Alignment:
Q  56 tttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttag 152  Q
    |||||||| |||||||| ||||||||||||||||  ||||||||||||||  ||||| | ||||||||||| ||||   ||||||||||||| |||||||    
T  37169374 tttaatttgatcatatatttttgtaggcattatgctgttatatgctatta--acttgaaggttgtgagtttcttcgcggattcatcctttacgtttttag 37169471  T
Q  153 cgatgttgaatgatataatctctcgatttgaatgaatgaat 193  Q
    || ||||||||||| |||||| | |||||||||||| ||||    
T  37169472 cggtgttgaatgatgtaatctattgatttgaatgaaagaat 37169512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 2342595 - 2342747
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||||||||||||||||||||||||| |||||||||||||||                 ||||||||||| ||||||||||||||   ||||||||    
T  2342595 atattccggtcactttaattttatcatatatttttgtaggcattat-----------------taacttggatgctgtgagtttgttcgcagattcatcc 2342677  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| | ||||||| |||| || ||| |||||||||||||||||||||||||||||| |||||||||||    
T  2342678 tttacgtctttagcggtgttaaacgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 2342747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 51 - 200
Target Start/End: Original strand, 21488233 - 21488383
Alignment:
Q  51 gtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatt 147  Q
    |||||||||||||||||||||| |||||||||||||||    |||||||||||||  ||||| ||  ||||||||| ||||   |||||||||| | |||    
T  21488233 gtcactttaattttatcatatatttttgtaggcattatactcttatatgctatta--acttgaatactgtgagtttattcgcagattcatccttaaaatt 21488330  T
Q  148 tttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| |||||| ||||||||| ||| | ||||||||| ||||||||||||||    
T  21488331 tttagtgatgttaaatgatatactctattgatttgaataaatgaatatcattt 21488383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 50194266 - 50194137
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga--atgatat 168  Q
    ||||||||||||| || |||||||||||||||  ||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||   |||| |    
T  50194266 ttttgtaggcattttgccgttatatgctatta--acttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcgatgttgattctgatgt 50194169  T
Q  169 aatctctcgatttgaatgaatgaatatcattt 200  Q
    | | | || |||||||||||||||||||||||    
T  50194168 attatatcaatttgaatgaatgaatatcattt 50194137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 38 - 193
Target Start/End: Original strand, 31794197 - 31794351
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||| || |||||||||||||||  |||||||||||  |||||||| |||   | ||    
T  31794197 catgagtattccggtcagtttaattttatcatatactgttgtaggca-tacgtcgttatatgctat--taacttggatg-agtgagtttattcgcaggtt 31794292  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaat 193  Q
    ||| |||||| ||||||||||| |||||| || || ||| ||||||| |||||||||||    
T  31794293 cattctttacgtttttagcgatattgaataatgtattctatcgatttaaatgaatgaat 31794351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 42719646 - 42719711
Alignment:
Q  40 tgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatta 105  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  42719646 tgaatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgccatta 42719711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 14464645 - 14464765
Alignment:
Q  46 ttccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatccttt 142  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||  ||||||| ||||  ||||||||||||| |||||||||||   ||||||||| ||    
T  14464645 ttccagtcactttaattttgtcatatatttttgtaggcattatgctgttatatactat--taacttggatgttctgagtttgttcgcagattcatccgtt 14464742  T
Q  143 acatttttagcgatgttgaatga 165  Q
    || |||||| || ||||||||||    
T  14464743 acgtttttaacggtgttgaatga 14464765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 36734640 - 36734573
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatta 105  Q
    ||||| |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36734640 catgagtatttcggttactttaattttatcatatatttttgtaggcattatgtcgttatatgctatta 36734573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 25849936 - 25850027
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| |||||||||| |||||  |||| ||||||| ||||||||||||||||| ||||  |||||||| |||||||||||||||||    
T  25849936 catgaatattccagtcactttaactttattgtatatttttgtaagcattatgtcgttatatactat--taacttgggtgttgtgagtttgttcg 25850027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 628853 - 628716
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaat--gatata 169  Q
    |||||||||||| || |||| ||| ||||||  |||||| |||||||||||||||||   ||||||||||||| ||||||||||| |||| |  ||| ||    
T  628853 tttgtaggcattttgccgttgtattctatta--acttgggtgttgtgagtttgttcgcagattcatcctttacgtttttagcgatcttgattttgatgta 628756  T
Q  170 atctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
     ||| || |||||||||||||||||||| |||||||||||    
T  628755 ttctatcaatttgaatgaatgaatatcattttgtttttgt 628716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 48650664 - 48650535
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgat-gttgaa--tgatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| |||||||||||||||||   ||||| |||||||||||||||||||  ||| |  |||| |    
T  48650664 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcagattcaccctttacatttttagcgatatttgtatctgatgt 48650567  T
Q  169 aatctctcgatttgaatgaatgaatatcattt 200  Q
    | ||| ||||||||||||||||||||||||||    
T  48650566 actctatcgatttgaatgaatgaatatcattt 48650535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 35175562 - 35175686
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga--atgatata 169  Q
    |||||||||||| |||| || ||||||||||  |||||  |||||||||||||||||   ||||||| ||||| ||||||||||||||||  ||||| ||    
T  35175562 tttgtaggcattttgtcattgtatgctatta--acttgagtgttgtgagtttgttcgcagattcatcttttacgtttttagcgatgttgattatgatgta 35175659  T
Q  170 atctctcgatttgaatgaatgaatatc 196  Q
     ||| || |||||||||||||||||||    
T  35175660 ttctatcaatttgaatgaatgaatatc 35175686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 53807788 - 53807651
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga--atgatata 169  Q
    |||||||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||||||||||| ||||||||||| ||||   |||| ||    
T  53807788 tttgtaggcattttgccgttgtatgctatta--acttgggtggtgtgagtttgttcgcagattcatcctttacgtttttagcgatcttgattctgatgta 53807691  T
Q  170 atctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
     ||| | ||||| ||||||||||||||| |||||||||||    
T  53807690 ttctattgattttaatgaatgaatatcattttgtttttgt 53807651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 10229598 - 10229759
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    ||||| |||| |||| |||| | |||||||||||  ||| ||||||||| || |||| ||||||||||  |||||| || ||||||||||||||   |||    
T  10229598 catgattatttcggtgacttaagttttatcatattattt-gtaggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgtagatt 10229694  T
Q  135 catcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc 196  Q
    || ||||||| |||||||| ||||| | ||  |||||| ||| ||||||||||||||||||||||    
T  10229695 caccctttacgtttttagctatgtttgtatttgatatactctatcgatttgaatgaatgaatatc 10229759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 33580038 - 33580176
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| |||||||| ||||||||   ||||| ||||||| ||||||| |||||| | ||  ||| |    
T  33580038 tttgtaggcattttgccgttttatgctatta--acttgggtgttgtgattttgttcgcagattcaccctttacgtttttagtgatgtttgtatttgatgt 33580135  T
Q  169 aatctctcgatttgaatgaatgaatatcat-ttgtttttgt 208  Q
    ||||| |||||||||||||||||||||| | ||||||||||    
T  33580136 aatctatcgatttgaatgaatgaatatcgtcttgtttttgt 33580176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 40487483 - 40487621
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| || ||||||||| |||||  |||||| |||||||||||||||||   |||||  |||||  |||||||||||| ||| |  ||||||    
T  40487483 tttgtaggcattttgccgttatatgttatta--acttgggtgttgtgagtttgttcgcaaattcactctttatgtttttagcgatgtttgtatctgatat 40487580  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  40487581 actctatcgatttgaatgaatgaatatcgttttgtttttgt 40487621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 21533739 - 21533601
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||| | | ||||| |||||||||||||| | ||  ||| |    
T  21533739 tttgtaggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgcagatttaccttttacgtttttagcgatgtttgtatctgatgt 21533642  T
Q  169 aatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||| |||||||||||    
T  21533641 actctatcgatttgaatgaatgaatatcattttgtttttgt 21533601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 43017046 - 43017184
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||| ||||||||||  |||| | |||||||||||| |||    ||||||||||||| |||||||||||||| | ||  ||| |    
T  43017046 tttgtaggcattttgccgttgtatgctatta--acttaggtgttgtgagtttattcacatattcatcctttacgtttttagcgatgtttgtatctgatgt 43017143  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  43017144 actctatcgatttgaatgaatgaatatcgttttgtttttgt 43017184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 52923047 - 52922909
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| |  |||| ||||||||||  |||||| || ||||||||||||||   ||||| ||||||| |||||||||||||| | ||  ||| |    
T  52923047 tttgtaggcattttaccgttgtatgctatta--acttggctgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatttgatgt 52922950  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  52922949 actctatcgatttgaatgaatgaatatcgttttgtttttgt 52922909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 9998625 - 9998750
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||| ||||||| |||||||| ||||| | ||  ||| |    
T  9998625 tttgtaggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtttgtatttgatgt 9998722  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  9998723 actctatcgatttgaatgaatgaatatc 9998750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 10108394 - 10108519
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||| ||||||| |||||||| ||||| | ||  ||| |    
T  10108394 tttgtaggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtttgtatttgatgt 10108491  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  10108492 actctatcgatttgaatgaatgaatatc 10108519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 45568375 - 45568250
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| || ||||||||| ||||   ||||| ||||||| |||||||||||||| | ||  ||| |    
T  45568375 tttgtaggcattttgccgttgtatgctatta--acttgggtgatgtgagtttattcgcagattcaccctttacgtttttagcgatgtttgtatctgatgt 45568278  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  45568277 actctatcgatttgaatgaatgaatatc 45568250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 54149149 - 54149274
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcga---ttcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||||||||||| ||||||||||  || ||| || |||||||| |||||    |||| ||||||| |||||||||||||| | ||  ||| |    
T  54149149 tttgtaggcattatgtcgttgtatgctatta--acctgggtgatgtgagttagttcgcaggttcaccctttacgtttttagcgatgtttgtatctgatgt 54149246  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  54149247 actctatcgatttgaatgaatgaatatc 54149274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 200
Target Start/End: Original strand, 4821946 - 4822092
Alignment:
Q  56 tttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttag 152  Q
    |||||||| |||||||  ||||||||||||| ||  ||||||||||||  |||||||| || |||||||||||||   ||||||| |||||  |||||||    
T  4821946 tttaatttcatcatatt-ttttgtaggcattttgctgttatatgctat--taacttgggtgatgtgagtttgttcgcagattcattctttatgtttttag 4822042  T
Q  153 cgatgttga--atgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    | |||||||   | || || | | || |||||||||||||||||||||||    
T  4822043 caatgttgattctaatgtattttatcaatttgaatgaatgaatatcattt 4822092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 6823477 - 6823408
Alignment:
Q  131 gattcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||| ||||  |||||||||||||| ||| || |||||| || |||| ||||||||||||||||||    
T  6823477 gattcatcatttaggtttttagcgatgtttaataatgtaatctatcaatttaaatgaatgaatatcattt 6823408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 21313158 - 21313332
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    ||||| |||| |||| ||||  ||||||||||||  ||| |||| |||| || |||| ||||||||||  |||||| || ||||||||||||||   |||    
T  21313158 catgagtatttcggtgacttagattttatcatattattt-gtagccattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcggagatt 21313254  T
Q  135 catcctttacatttttagcgatg-ttgaa--tgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    || ||||||||||||||||| || ||| |  ||||||| ||  || |||||||||||||||||||  |||||||||||    
T  21313255 caccctttacatttttagcggtgtttgtatctgatatactcaatcaatttgaatgaatgaatatcgttttgtttttgt 21313332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 6954626 - 6954488
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| || |||||||||||| |   ||||| ||||||| |||||||||||| ||| |  |||  |    
T  6954626 tttgtaggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcgatgtttgtatctgaagt 6954529  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  6954528 actctatcgatttgaatgaatgaatatcgttttgtttttgt 6954488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 9797464 - 9797326
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| ||||||| ||||||||  |||||||| || |||||||||||| |   ||||| ||||||| || ||||||||| ||| |  |||| |    
T  9797464 tttgtaggcattttgtcgttgtatgctat--taacttgggtgctgtgagtttgtttgtatattcaccctttacgttcttagcgatgtttgtatctgatgt 9797367  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | | | ||||||||||||||||||||||  |||||||||||    
T  9797366 actatatcgatttgaatgaatgaatatcgttttgtttttgt 9797326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 16235585 - 16235638
Alignment:
Q  76 ttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    ||||||||||| ||||||| ||||||||  ||||||||||| ||||||||||||||    
T  16235585 ttgtaggcattttgtcgttgtatgctat--taacttggatggtgtgagtttgttcg 16235638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 51923885 - 51923972
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga 161  Q
    |||||||||||| || |||| ||||||||||  |||||| |||||||||||||||||   || |||||| ||| ||||||||||| ||||    
T  51923885 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcatatccatcctatacgtttttagcgatattga 51923972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 4711640 - 4711725
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt---cgattcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| || |||| ||||||||||  |||||| |||||||||||||||    |||||||||||||  ||||||| ||||||    
T  4711640 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgtttgcagattcatcctttatgtttttagtgatgtt 4711725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 6910327 - 6910227
Alignment:
Q  111 tggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgtttttg 207  Q
    ||||| ||||||||||||||    ||| ||||||||| ||| ||||| |||||||  ||||| ||| | |||||||||||||||| ||  ||||||||||    
T  6910327 tggatattgtgagtttgttcacaaatttatcctttacgtttatagcggtgttgaacaatatactctattgatttgaatgaatgaacattttttgtttttg 6910228  T
Q  208 t 208  Q
    |    
T  6910227 t 6910227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Original strand, 33076703 - 33076733
Alignment:
Q  178 atttgaatgaatgaatatcatttgtttttgt 208  Q
    |||||||||||||||||||||||||||||||    
T  33076703 atttgaatgaatgaatatcatttgtttttgt 33076733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 38860042 - 38859988
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| || |||| ||||||||||  |||||| |||||||||||||||||    
T  38860042 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcg 38859988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 44959903 - 44959780
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || | || ||||||||||  ||||||||| ||||||||| || |   ||||| ||||||| |||||||||||||| | ||  ||| |    
T  44959903 tttgtaggcattttgccattgtatgctatta--acttggatgctgtgagtttatttgcagattcaccctttacgtttttagcgatgtttgtatctgatgt 44959806  T
Q  169 aatctctcgatttgaatgaatgaata 194  Q
    | ||| ||||||||||||||||||||    
T  44959805 attctatcgatttgaatgaatgaata 44959780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 51303573 - 51303519
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| || |||| ||||||||||  |||||| |||||||||||||||||    
T  51303573 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcg 51303519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 21289744 - 21289657
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    |||||||||||| || |||| ||||||||  |||||||| || |||||||||||||   |||||| ||| ||| ||||||||||| ||||    
T  21289744 tttgtaggcattttgccgttgtatgctat--taacttgggtgctgtgagtttgttcgcagattcaccctatacgtttttagcgatattga 21289657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 27856352 - 27856410
Alignment:
Q  106 taacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    ||||||||||| |||||||||||||   |||||||| ||||| ||||||||||| ||||    
T  27856352 taacttggatgatgtgagtttgttcgcagattcatcttttacgtttttagcgatattga 27856410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 32701651 - 32701734
Alignment:
Q  77 tgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    |||||||||| || |||| |||||||| |  ||||||||| |||||||||||||   |||||| | |||| |||||||||||||||    
T  32701651 tgtaggcattttgccgttgtatgctatga--acttggatgctgtgagtttgttcgcagattcaccttttatatttttagcgatgtt 32701734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 42455749 - 42455696
Alignment:
Q  76 ttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||| |||| ||||||| ||||||||||  |||| |||||||||||||||||||    
T  42455749 ttgtagtcattttgtcgttgtatgctatta--acttcgatgttgtgagtttgttcg 42455696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 42460907 - 42460994
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    |||||||||||| ||| ||| ||||||||  |||||||| |  |||||||||||||   |||||| ||||||||||| ||||||| ||||    
T  42460907 tttgtaggcattttgttgttgtatgctat--taacttgggtactgtgagtttgttcgcagattcaccctttacatttatagcgatattga 42460994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 45047922 - 45047966
Alignment:
Q  164 gatataatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    |||||| ||| || ||||||||||||||||||||||| |||||||    
T  45047922 gatatactctatcaatttgaatgaatgaatatcatttatttttgt 45047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 6e-61; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 9687153 - 9686980
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||   |||    
T  9687153 ccatgaatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgatgtgagtttgttcgcagat 9687056  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  9687055 tcatcctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttgtttttgt 9686980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 50148509 - 50148667
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||   ||||||||    
T  50148509 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctatta--acttggatgttgtgagttgtttcgcagattcatcc 50148606  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  50148607 tttacatttttagcgatgttgaatgatgtaatctctcgatttgaatgaaagaatatcattt 50148667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 27915046 - 27914882
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcgattcatccttt 142  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||  | ||||||| |||||||||||||||||||||||||    
T  27915046 atattccggtcactttaatttcatcatatatttttgtaggtattttgtcgttatatgctatta--atttggatgctgtgagtttgttcgattcatccttt 27914949  T
Q  143 acatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||| |||||||||||    
T  27914948 acatttttagcggtgttgaatgatgtaatatcttgatttgaatgaatgaatatcattttgtttttgt 27914882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 51868595 - 51868429
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg--- 131  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||||||||| ||||||||| |||||  ||||||||| ||||||||||||||       
T  51868595 gaccatgaatattccgatgactttaattttatcatatatttttgtaggcattatgccgttatatgttatta--acttggatgctgtgagtttgttcgcaa 51868498  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  51868497 attcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 51868429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 37 - 199
Target Start/End: Original strand, 51871996 - 51872159
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||   |||    
T  51871996 ccatggatattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgctgtgagtttgttcgcagat 51872093  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatt 199  Q
    ||||||||||| ||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||    
T  51872094 tcatcctttacgtttttagcggtgttgaaggatgtaatctctcaatttgaatgaatgaatatcatt 51872159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 5324506 - 5324334
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||   |||    
T  5324506 ccatggatatttcggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgttgtgag-ttgttcgcagat 5324410  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| || |||||||||||    
T  5324409 tcatgctttacgtttttagcgatgttgaatgatgtaatctctcgatttaaatgaatgaataacattttgtttttgt 5324334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 44 - 200
Target Start/End: Complemental strand, 50166040 - 50165883
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||   ||||||||||    
T  50166040 tattctggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgttgtgagtttgttcacagattcatcct 50165943  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  50165942 ttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattt 50165883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 25406231 - 25406068
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||   ||||    
T  25406231 catggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgctgtgagtttgttcgcagatt 25406134  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||| ||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||    
T  25406133 catcttttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattt 25406068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 7342853 - 7343019
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg--- 131  Q
    ||||||| |||||||||| ||||||||||||||||||| |||| |||||||||||  ||||||||||||||  ||||||||| ||||||||||||||       
T  7342853 gaccatggatattccggtgactttaattttatcatatatttttataggcattatgatgttatatgctatta--acttggatgctgtgagtttgttcgcag 7342950  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  7342951 attcatcctttacgtttttagcggtgttgagtgatgtaatctctcgatttgaatgaatgaatatcattt 7343019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 11709649 - 11709491
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||  | || |||||||||||||||||||   ||||||||    
T  11709649 atattccggtcactttaattttatcatatatttttgtaggcattatgccgtgatatgctatta--atttagatgttgtgagtttgttcgcagattcatcc 11709552  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||    
T  11709551 tttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 11709491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 28035272 - 28035433
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc-gattc 135  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| |||  |||||| |||||||||||||||| | |||||    
T  28035272 ccatgaatattccggtcactttaattttatcataaatttttgtaggcattatgccgttatatgttat--taactttgatgttgtgagtttgtgcagattc 28035369  T
Q  136 atcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||| ||||||||| ||||||||||| ||||||||| | |||||||||||||||||||||    
T  28035370 atcctttacgtttttagcggtgttgaatgatgtaatctctc-aattgaatgaatgaatatcattt 28035433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 45805776 - 45805613
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||  ||||||||| ||||||||||||||   ||    
T  45805776 ccatggatattccggtgactttaattttatcatatatttttgtaggtattatgtcgttatatg-tatta--acttggatgatgtgagtttgttcgcagat 45805680  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  45805679 tcatcctttacgtttttaacggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 45805613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 46 - 206
Target Start/End: Complemental strand, 31130532 - 31130370
Alignment:
Q  46 ttccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatccttt 142  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||||||| ||||||  ||||||||| |||||||||||||    |||||||||||    
T  31130532 ttccggtcactttaattttattatgtatttttgtaggcattatgtcgttatattctatta--acttggatgctgtgagtttgttcacatattcatccttt 31130435  T
Q  143 acatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgttttt 206  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  31130434 acatttttagcgatgttgaatgatgtaacctgtcgatttgaatgaatgaatatcagtttgttttt 31130370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 45426014 - 45425842
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||  |||||||||||||  ||||||||||| ||||||||| |||   |||    
T  45426014 ccatgaatatttcggtcactttaattttatcatatatttttgtaggcattataccgttatatgctat--taacttggatgctgtgagtttattcgcagat 45425917  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    ||||| ||||| ||||||||||| || |||||| ||||||||| ||||||||||||||||||  |||||||||||    
T  45425916 tcatcatttacgtttttagcgatattaaatgatgtaatctctcaatttgaatgaatgaatatattttgtttttgt 45425842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 63 - 208
Target Start/End: Original strand, 48217596 - 48217743
Alignment:
Q  63 ttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    |||||||||| ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||   ||||||||||||||||||||||  ||||    
T  48217596 ttatcatatatttttgtaggcattatgttgttatatgctatta--acttggatgttgtgagtttgttcgcaaattcatcctttacatttttagcagtgtt 48217693  T
Q  160 gaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
     |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  48217694 aaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 48217743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 19715837 - 19715679
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||||  ||||||||| ||||||||| ||||   ||||||||    
T  19715837 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctatta--acttggatgctgtgagtttattcgcagattcatcc 19715740  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||    
T  19715739 tttacgtttttagcggtgttgaatgatgtaatctctcaatttaaatgaatgaatatcattt 19715679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 19723452 - 19723610
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||||||||| ||||||||| ||||   ||||||||    
T  19723452 atatttcggttactttaattttatcatatatttttgtaggcattatgtcgttatatgttatta--acttggatgctgtgagtttattcgcagattcatcc 19723549  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||    
T  19723550 tttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatataattt 19723610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 39 - 200
Target Start/End: Complemental strand, 50272086 - 50271924
Alignment:
Q  39 atgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattc 135  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||||||||||  |||||| ||||||||||||||||||   |||||    
T  50272086 atgaatattccagtcactttaattttgtcatatatttttgtaggcattatgccgttatatgctat--taacttagatgttgtgagtttgttcgcagattc 50271989  T
Q  136 atcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||| |||| ||||||||| ||||||||||| |||| ||||||||||||||||| ||||| ||||    
T  50271988 atccgttacctttttagcggtgttgaatgatgtaatatctcgatttgaatgaataaatattattt 50271924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 3871542 - 3871704
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcgat--tc 135  Q
    |||| ||||| |||||||| |||||||| |||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| |  |     
T  3871542 catgtatatttcggtcactataattttaacatatatttttgtaggcattatgccgttatatgctatta--acttggatgttgtgagtttgttcgttgatt 3871639  T
Q  136 atcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||  ||||||||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  3871640 atcctttatgtttttagcggtgtttaatgatgtaatctctcgatttgaatgaatgaatatcattt 3871704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 11454074 - 11454234
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatat--gctattataacttggatgttgtgagtttgttcg---attcat 137  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||| | ||||||  |||||||  ||||||||||||||||||||||||   ||||||    
T  11454074 atattctggtcactttaattttatcatatatttatgtaggcattatgccattatatatgctatta--acttggatgttgtgagtttgttcgcagattcat 11454171  T
Q  138 cctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  11454172 cctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaataaatatcattt 11454234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 5701398 - 5701542
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||||||||||||||||||| |||||||| || ||||||||||||| |||||||||||||  |||||||||||||||||||||||||   |||||||||    
T  5701398 atattccggtcactttaatttcatcatatatttgtgtaggcattatgccgttatatgctat--taacttggatgttgtgagtttgttcgcagattcatcc 5701495  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatg 186  Q
    ||||| ||||||||| ||||||||||| ||||||||| |||||||||    
T  5701496 tttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatg 5701542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 208
Target Start/End: Original strand, 20266444 - 20266608
Alignment:
Q  46 ttccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatccttt 142  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||| ||||  ||||||||||||||||||| ||||   |||||||||||    
T  20266444 ttccagtcactttaatttcatcatatacttttgtagacattatgccgttatatgcaatta--acttggatgttgtgagtttattcgcagattcatccttt 20266541  T
Q  143 acatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    || ||||||| | |||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  20266542 acgtttttagtggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 20266608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 40646813 - 40646970
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgag-tttgttc---gattcatc 138  Q
    |||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||   ||||||||    
T  40646813 atattctggtcactataatttcatcatatatttttgtaggcattatgtcgttatatgctattat--cttggatgttgtgagttttgttcgcagattcatc 40646910  T
Q  139 ctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||| ||||||||| |||||||||   |||||||||||||||||||||||||||||||||    
T  40646911 ctttacgtttttagcggtgttgaatg--ttaatctctcgatttgaatgaatgaatatcattt 40646970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 30879214 - 30879381
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||| |||||||||||| |||||||| |||||||| |||||||| ||||||| ||||||  |||  |||||||||||||||||||   |||||| |    
T  30879214 atattccgatcactttaatttcatcatatatttttgtagacattatgttgttatatactatta--actatgatgttgtgagtttgttcgcagattcattc 30879311  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  30879312 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 30879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 59 - 208
Target Start/End: Original strand, 31836989 - 31837140
Alignment:
Q  59 aattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcga 155  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||||  ||||||||  ||||||||||||||   ||| |||||||||||||||||||     
T  31836989 aatttcatcatatatttttgtaggcattatgccgttatatgctatta--acttggatactgtgagtttgttcgcagatttatcctttacatttttagcgg 31837086  T
Q  156 tgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  31837087 tgttgaatgatataatctctcgatttaaatgaatgaatatcattttgtttttgt 31837140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 196
Target Start/End: Original strand, 9172629 - 9172783
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||| || ||| ||||||||  ||||||||| ||||||||||||||   ||||||||    
T  9172629 atattccggtgactttaattttatcatatatttttataggcattatgccgctatttgctatta--acttggatgatgtgagtttgttcgcagattcatcc 9172726  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    ||||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  9172727 tttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatc 9172783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 196
Target Start/End: Original strand, 9180611 - 9180765
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||| || ||| ||||||||  ||||||||| ||||||||||||||   ||||||||    
T  9180611 atattccggtgactttaattttatcatatatttttataggcattatgccgctatttgctatta--acttggatgatgtgagtttgttcgcagattcatcc 9180708  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    ||||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  9180709 tttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatc 9180765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 33291360 - 33291202
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt---cgattcatcc 139  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |  ||||||||||| ||||||||||||    ||||||||     
T  33291360 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctgt--taacttggatgctgtgagtttgttagcagattcatca 33291263  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||  | ||||||||||| |||||||||||||| ||||||||||||||||||    
T  33291262 tttacgtttttattggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattt 33291202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 44 - 200
Target Start/End: Complemental strand, 18569252 - 18569095
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcct 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||| ||||   |||||  ||    
T  18569252 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctat--taatttggatgttgtgagtttattcgcaaattcaagct 18569155  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||  |||||||| |||||||||| | || | | ||||||||||||||||||||||||||    
T  18569154 ttatgtttttagcaatgttgaatggtgtattatgtcgatttgaatgaatgaatatcattt 18569095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 34519261 - 34519434
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||| |||| ||||||  ||||||||||  |||||||||||||   |||    
T  34519261 ccatggatattccggtcactttaattttatcatatatttttgtatgcattatgtcattatttgctat--taacttggatcctgtgagtttgttcgcagat 34519358  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| |  || ||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  34519359 tcatcctttacgtttttagcggtaatggatgatgtaatccctcgatttgaatgaatgaatatcattttgtttttgt 34519434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 9919522 - 9919683
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||||||||||||| |||||||||| |||||||| ||||||| |||||||| |||||||||||||  ||||||||||| |||||||||||||   |||    
T  9919522 ccatgaatattccggtgactttaatttgatcatatatttttgta-gcattatgccgttatatgctat--taacttggatgctgtgagtttgttcgcagat 9919618  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    | ||||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||||||||||    
T  9919619 ttatcctttacatttttagcggt-ttgaatgatgtaatctctcgatttgaat-aatgaatatcattt 9919683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 38520482 - 38520310
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| ||||||| ||||||||||||||||| |||| |||||||||||||||  |||||||||||||  |||||||||||||||||||||||||    |||    
T  38520482 catggatattccagtcactttaattttatcgtatatttttgtaggcattataccgttatatgctat--taacttggatgttgtgagtttgttcacaaatt 38520385  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||||| ||||||| ||||||||||||| |||| |||| |||| ||||||||||||| | |||||||||||    
T  38520384 catcctttacgtttttagtgatgttgaatgatgtaatttctcaatttaaatgaatgaatatgattttgtttttgt 38520310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 30818299 - 30818139
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcgattca 136  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||  |||||||||||||||          ||||||    
T  30818299 ccatgaatattccggtcactttaattttatcatatatttttgtaggcattatagcgttatatgctat--taacttggatgttgt----------gattca 30818212  T
Q  137 tcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    |||||||||||||||||| ||||||||||| |||| ||| ||||||||| ||||||||||  |||||||||||    
T  30818211 tcctttacatttttagcggtgttgaatgatgtaatttcttgatttgaattaatgaatatctttttgtttttgt 30818139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 181
Target Start/End: Complemental strand, 40880961 - 40880816
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||   |||    
T  40880961 ccatggatattctggtcactttaattttatcatatatttttgtaggcattatgctgttatatgctat--taacttggatgttgtgagtttgttcgcagat 40880864  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgattt 181  Q
     |||| ||||| ||||||||| |||||||| |||||||||||||||||    
T  40880863 gcatcatttacgtttttagcggtgttgaataatataatctctcgattt 40880816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 33817116 - 33816943
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| |||  ||||||||||| |||||||||||||   |||    
T  33817116 ccatgaatattccggtcactttaattttctcatatatttttgtaggcattatgtcattatatgttat--taacttggatgatgtgagtttgttcgcggat 33817019  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||  ||||||||  | |||||||||  ||| | | |||||||||||||||| |||| |||||||||||    
T  33817018 tcatcctttatgtttttagcagtattgaatgatgaaatattttgatttgaatgaatgaagatcattttgtttttgt 33816943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 33876586 - 33876413
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| |||  ||||||||||| |||||||||||||   |||    
T  33876586 ccatgaatattccggtcactttaattttctcatatatttttgtaggcattatgtcattatatgttat--taacttggatgatgtgagtttgttcgcggat 33876489  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||  ||||||||  | |||||||||  ||| | | |||||||||||||||| |||| |||||||||||    
T  33876488 tcatcctttatgtttttagcagtattgaatgatgaaatattttgatttgaatgaatgaagatcattttgtttttgt 33876413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 32677072 - 32676919
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||       ||||||||||| ||||||||||||||   |||||||     
T  32677072 atattccagtcactttaattttatcatatatttttgtaggcattatgccgttatat-------taacttggatgatgtgagtttgttcgcagattcatct 32676980  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||| | ||||||||||| |||||||| ||||||||||||| ||||||||||    
T  32676979 tttacgtttttagtggtgttgaatgatgtaatctcttgatttgaatgaataaatatcattt 32676919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 35584560 - 35584398
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||    ||||  ||||||||| ||||||||||||||   ||||||||    
T  35584560 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttata----atta--acttggatgctgtgagtttgttcgcaaattcatcc 35584467  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| |||| |||| | ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  35584466 tttacgtttt-agcggtattgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 35584398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 44 - 208
Target Start/End: Complemental strand, 41081645 - 41081479
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||  |||||||| |||||  ||| |||||||||||||||||||   |||||||  |    
T  41081645 tattctggtcattttaattttatcatatatttttgtaggcattatgcagttatatgttatta--actcggatgttgtgagtttgttcacagattcatgtt 41081548  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||| ||||||||  ||||||||||| || ||| ||||||||||||||||||||||| |||||||||||    
T  41081547 ttacgtttttagcactgttgaatgatgtactctatcgatttgaatgaatgaatatcattttgtttttgt 41081479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 39927502 - 39927343
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    ||||| ||||||  ||||||||||||||||||||| |||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||   |||    
T  39927502 catgagtattccaatcactttaattttatcatatatttttgtaggcattatgccgttatatcttat--taatttggatgttgtgagtttgttcgcatatt 39927405  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    |||||||||  ||||||||||||||||| |||||| | | || |||| ||||||||||||||    
T  39927404 catcctttatgtttttagcgatgttgaacgatatactatatctatttcaatgaatgaatatc 39927343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 163
Target Start/End: Original strand, 7997924 - 7998049
Alignment:
Q  39 atgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt---cgattc 135  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| |||  ||||||||||| ||||||||||||    |||||    
T  7997924 atgaatattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgttat--taacttggatgatgtgagtttgtttgcagattc 7998021  T
Q  136 atcctttacatttttagcgatgttgaat 163  Q
    ||||||||| ||||||||| ||||||||    
T  7998022 atcctttacgtttttagcggtgttgaat 7998049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 74 - 208
Target Start/End: Original strand, 47133064 - 47133202
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga--atgatat 168  Q
    ||||||||||||| || |||||||||||||||  |||||||||||||||||||||||   |||| ||||||||| ||||||||||||||||   |||| |    
T  47133064 ttttgtaggcattttgccgttatatgctatta--acttggatgttgtgagtttgttcgcagatttatcctttacgtttttagcgatgttgattctgatgt 47133161  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| || |||||||||||||||||||  |||||||||||    
T  47133162 attctatcaatttgaatgaatgaatatcgttttgtttttgt 47133202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 75 - 200
Target Start/End: Original strand, 24583308 - 24583436
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga--atgatata 169  Q
    |||||||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||||||||||||||||||||||| ||||   |||| ||    
T  24583308 tttgtaggcattttgccgttgtatgctatta--acttgggtgatgtgagtttgttcgcagattcatcctttacatttttagcgatcttgattctgatgta 24583405  T
Q  170 atctctcgatttgaatgaatgaatatcattt 200  Q
     ||| ||||||||||||||||||||||||||    
T  24583406 ttctatcgatttgaatgaatgaatatcattt 24583436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 208
Target Start/End: Original strand, 27872873 - 27873044
Alignment:
Q  40 tgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattca 136  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| |||||||| ||||||||| |||  ||||||| |||||||||||||||||   ||||||    
T  27872873 tgaatattccaatcattttaattttatcatatatttttgtaagcattatgccgttatatgttat--taacttgaatgttgtgagtttgttcgcagattca 27872970  T
Q  137 tcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatg-aatatca-tttgtttttgt 208  Q
    || ||||| |||||| |  |||||| || | |||||||   |||| |||||||| ||||||| |||||||||||    
T  27872971 tcatttacgtttttaacattgttgattggtgtaatctccgaatttaaatgaatgaaatatcattttgtttttgt 27873044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 48365707 - 48365622
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    ||||||| | ||||||||||||||||||| ||||||||| |||||||||||||| | |||  ||||||||||| ||||||||||||||    
T  48365707 tattccgattactttaattttatcatatatttttgtaggaattatgtcgttataagttat--taacttggatgctgtgagtttgttcg 48365622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 7312053 - 7311962
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    ||||| |||| ||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||  |||||||||| || | ||||||||||    
T  7312053 catgagtatttcggtcactttagttttatcatatatttttgtaggcattatgccgttatatactat--taacttggatattataagtttgttcg 7311962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 200
Target Start/End: Original strand, 24583112 - 24583240
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttgaat--gatata 169  Q
    |||||||||||| || |||| |||| |||||  |||||| || |||||||||||||   |||||||||||||| ||||||||||| |||| |  ||| ||    
T  24583112 tttgtaggcattttgccgttgtatgatatta--acttgggtgatgtgagtttgttcacagattcatcctttacgtttttagcgatcttgattctgatgta 24583209  T
Q  170 atctctcgatttgaatgaatgaatatcattt 200  Q
     ||| ||||||||||||||||||||||||||    
T  24583210 ttctatcgatttgaatgaatgaatatcattt 24583240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 14545650 - 14545718
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatta 105  Q
    |||||| ||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  14545650 ccatgagtattccgatcattttaattttatcatatatttttgtaggcattatgccgttatacgctatta 14545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 49627075 - 49627210
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga--atgatata 169  Q
    ||||||| |||| || |||| ||||||||||  | |||| |||||||||||||||||   ||||||||||||| ||||||||||| ||||   |||| ||    
T  49627075 tttgtagacattttgccgttgtatgctatta--atttgggtgttgtgagtttgttcgcagattcatcctttacgtttttagcgatcttgattctgatgta 49627172  T
Q  170 atctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
     ||| |||||||| ||||||||||||||||| |||||||    
T  49627173 ttctatcgatttg-atgaatgaatatcatttttttttgt 49627210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 208
Target Start/End: Complemental strand, 32679072 - 32678936
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga--atgatat 168  Q
    ||||||||||||| || |||||||||| ||||  |||||||||||||||||||||||   |||||||||  ||| ||||||||||||||||   | ||||    
T  32679072 ttttgtaggcattttgccgttatatgccatta--acttggatgttgtgagtttgttcgcagattcatcc--tacgtttttagcgatgttgattctaatat 32678977  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||  || |||||||||||||||||||  |||||||||||    
T  32678976 attccatcaatttgaatgaatgaatatcgttttgtttttgt 32678936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 34878208 - 34878070
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt---gaatgatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| ||||||||||||||||   |||||| | ||||| ||||||||||||||      |||| |    
T  34878208 tttgtaggcattttgccgttttatgctatta--acttgggtgttgtgagtttgttcacagattcaccttttacgtttttagcgatgtttccatctgatgt 34878111  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    ||||| ||||||||||||||||||||||  |||||||||||    
T  34878110 aatctatcgatttgaatgaatgaatatcgttttgtttttgt 34878070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 39987528 - 39987588
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatta 105  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||||    
T  39987528 tattccggtcactttaattttatcatata-ttttataggcattatgctgttatatgctatta 39987588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 39987646 - 39987711
Alignment:
Q  131 gattcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    |||||||||||||| ||||||||| ||||||||||| |||| | || |||||||||||||||||||    
T  39987646 gattcatcctttacgtttttagcggtgttgaatgatgtaatttatcaatttgaatgaatgaatatc 39987711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 206
Target Start/End: Complemental strand, 13144742 - 13144608
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt--gaatgatata 169  Q
    |||||||||||| || | || ||||||||||  |||||||||||||||||||||||   |||||| |||||||||||||| |||||||   | |||| ||    
T  13144742 tttgtaggcattttgccattttatgctatta--acttggatgttgtgagtttgttcgcagattcaccctttacatttttaacgatgtttgtattgatgta 13144645  T
Q  170 atctctcgatttgaatgaatgaatatcatttgttttt 206  Q
     ||| || |||||||| |||| ||||||||| |||||    
T  13144644 ctctatcaatttgaataaatgcatatcattttttttt 13144608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 198
Target Start/End: Original strand, 19061071 - 19061197
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga--atgatata 169  Q
    |||||||||||| || |||| ||||||||||  ||||||||||||||||||||||||   ||||||| ||||  ||||||||||| ||||   |||| ||    
T  19061071 tttgtaggcattttgccgttgtatgctatta--acttggatgttgtgagtttgttcgcacattcatcttttatgtttttagcgatcttgattctgatgta 19061168  T
Q  170 atctctcgatttgaatgaatgaatatcat 198  Q
     | | || |||||||||||||||||||||    
T  19061169 ttatatcaatttgaatgaatgaatatcat 19061197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 35484321 - 35484196
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||| ||||| || |||| ||||||||||  |||||| |||||||||||||||||   ||||  |||||||||||||||||||||| | ||  ||| |    
T  35484321 tttgtaagcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcagattcgccctttacatttttagcgatgtttgtatctgatgt 35484224  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  35484223 actctatcgatttgaatgaatgaatatc 35484196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 44543434 - 44543570
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga--atgatata 169  Q
    |||||||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||||||||||| ||||||||||| ||||   |||| ||    
T  44543434 tttgtaggcattttgccgttttatgctatta--acttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgatcttgattctgatgta 44543531  T
Q  170 atctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
     ||| | |||||||||| |||||||||| |||||||||||    
T  44543532 ttctattgatttgaatg-atgaatatcattttgtttttgt 44543570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 44637567 - 44637714
Alignment:
Q  58 taattttatcatatacttttgtaggcatta----tgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacattttt 150  Q
    ||||||||||  ||| ||||||||||||||    || ||||||||| |||||  ||||||||| ||||||||| ||||   || ||||||||||  ||||    
T  44637567 taattttatctcatatttttgtaggcattaattatgccgttatatgttatta--acttggatgctgtgagtttattcgcagatccatcctttacgatttt 44637664  T
Q  151 agcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||  |||||||| || || ||| |||||| |||||||||||||||||||    
T  44637665 agctgtgttgaataatgtactctatcgattggaatgaatgaatatcattt 44637714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 31919151 - 31919232
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcga 155  Q
    ||||||| |||| ||||||| ||||||||||  |||||||||||| ||||||||||   |||||||||||||| ||||||||||    
T  31919151 tttgtagacattttgtcgttgtatgctatta--acttggatgttgcgagtttgttcgcagattcatcctttacgtttttagcga 31919232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 11462412 - 11462274
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||| ||| ||||||| ||||||||||  |||||| || ||||||||||||||   ||||| | ||||| |||||||||||||| | ||  ||| |    
T  11462412 tttgtaggaattttgtcgttgtatgctatta--acttgggtgctgtgagtttgttcgtagattcaccatttacgtttttagcgatgtttgtatctgatgt 11462315  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  11462314 actctatcgatttgaatgaatgaatatcgttttgtttttgt 11462274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 36775640 - 36775553
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    |||||||||||| || |||| ||||||||||  |||||||||||||||||||||||   |||||| ||| ||| ||||||||||| ||||    
T  36775640 tttgtaggcattttgccgttgtatgctatta--acttggatgttgtgagtttgttcgcagattcaccctatacgtttttagcgatattga 36775553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 7337564 - 7337468
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc 196  Q
    |||||||| |||||||||||||||||   ||||| |||||| ||||||||||||||| | ||  ||| || ||| ||||||||||||||||||||||    
T  7337564 taacttggctgttgtgagtttgttcgcagattcaccctttatatttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatc 7337468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 15431596 - 15431511
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    ||||||| |||| | ||||| |||||||||   |||||||||||||||||||||||   |||||||||||||| |||||||| |||||    
T  15431596 tttgtagacattttatcgttgtatgctattc--acttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcaatgtt 15431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 14545721 - 14545781
Alignment:
Q  149 ttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||| | ||||||||| ||||||||| ||||||| |||||||||||| |||||||||||    
T  14545721 ttagcggtattgaatgatgtaatctctctatttgaacgaatgaatatcattttgtttttgt 14545781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 14872801 - 14872939
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| || |||| ||||||||||  ||||||||| ||||||||||||||   ||||| ||||||| | ||  |||||| ||| |  |||| |    
T  14872801 tttgtaggcattttgccgttgtatgctatta--acttggatgctgtgagtttgttcgcatattcaccctttacttcttctgcgatgtttgtatgtgatgt 14872898  T
Q  169 aatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    | ||| ||||||| ||||||||||||||| |||||||||||    
T  14872899 actctatcgatttaaatgaatgaatatcattttgtttttgt 14872939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 27456648 - 27456731
Alignment:
Q  77 tgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    ||||| |||| ||||||| ||||||||||  |||||| |||||||||||||||||   ||||||| ||||| |||||| |||||||    
T  27456648 tgtagacattttgtcgttgtatgctatta--acttgggtgttgtgagtttgttcgcaaattcatcttttacgtttttaacgatgtt 27456731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 48750347 - 48750434
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga 161  Q
    |||||||||||| || |||| ||||||||||  |||||| |||||||||||||||||   ||||| ||| ||| ||||||||||| ||||    
T  48750347 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcatattcaccctatacgtttttagcgatattga 48750434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 12635337 - 12635419
Alignment:
Q  80 aggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    ||||||| ||||||| ||||||||||  ||||||||||||| |||||||||   |||||| | ||||  ||||||||||||||||    
T  12635337 aggcattttgtcgttgtatgctatta--acttggatgttgttagtttgttcggagattcaccttttatgtttttagcgatgttga 12635419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 51373788 - 51373703
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt---cgattcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| ||||||  ||||||||||  |||||| |||||||||||||||    |||||| ||||||| |||||| |||||||    
T  51373788 tttgtaggcattttgtcgtcgtatgctatta--acttgggtgttgtgagtttgtttggagattcaccctttacgtttttatcgatgtt 51373703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 51916576 - 51916520
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    |||||||| ||||||||||||||||    ||||||| ||||||||||||||||||||    
T  51916576 taacttgggtgttgtgagtttgttcccaaattcatcatttacatttttagcgatgtt 51916520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 5600960 - 5601019
Alignment:
Q  110 ttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgat 166  Q
    |||||| |||||||||||||||   ||||||  |||||||||||||| ||||||||||||    
T  5600960 ttggatattgtgagtttgttcgcagattcattatttacatttttagcaatgttgaatgat 5601019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 5983998 - 5984052
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| ||||||| ||||||||  |||||||| || ||||||||||||||    
T  5983998 tttgtaggcattttgtcgttgtatgctat--taacttgggtgatgtgagtttgttcg 5984052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 8211220 - 8211152
Alignment:
Q  92 gttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    ||||||||||||||  ||| |||||||||||||||||||   ||||||  |||||| ||||||||||||||    
T  8211220 gttatatgctatta--actcggatgttgtgagtttgttcgtagattcacgctttacgtttttagcgatgtt 8211152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 10776362 - 10776253
Alignment:
Q  106 taacttggatgttgtgagtttgttcga---ttcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatca-t 198  Q
    |||||||| || ||||||||||||||    |||| ||||||| |||||||||||||| | ||  |||||| ||| || ||||||||||| |||||||| |    
T  10776362 taacttgggtgctgtgagtttgttcgcaatttcaccctttacgtttttagcgatgtttgcatctgatatactctatcaatttgaatgaacgaatatcatt 10776263  T
Q  199 ttgtttttgt 208  Q
    ||||||||||    
T  10776262 ttgtttttgt 10776253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 18649862 - 18649756
Alignment:
Q  106 taacttggatgttgtgagtttgttcga---ttcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttg 201  Q
    ||||||||| ||||||| |||||| ||   |||||| ||||| ||||||||  |||||||||||||| | | || |||| || |||||||| ||| ||||    
T  18649862 taacttggacgttgtgaatttgtttgaaggttcatcttttacgtttttagcagtgttgaatgatatactatatcaatttaaacgaatgaatgtcattttg 18649763  T
Q  202 tttttgt 208  Q
    |||||||    
T  18649762 tttttgt 18649756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 2e-60; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 17237234 - 17237070
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||   |||    
T  17237234 ccatggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgttgtgagtgtgttcgcagat 17237137  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  17237136 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 17237070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 12059723 - 12059557
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---g 131  Q
    ||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||   |    
T  12059723 gaccatggatattccggtcactttaattttatcatatttttttgtaggaattatgtcgttatatgctat--taacttggatgttgtgagtttgttcgcag 12059626  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  12059625 attcatcctttacgtttttagcggtgttgaatgatataatctcttgatttaaatgaatgaatatcattt 12059557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 35001720 - 35001883
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||||||||||||   ||||    
T  35001720 catgaatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgttgtgagtttgttcgcagatt 35001817  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
     ||||||||| ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  35001818 aatcctttacgtttttagcgatgttgaatgatgtaatcttttgatttgaatgaatgaatatcattt 35001883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 4088589 - 4088762
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||  ||||||||| ||||||||||||||   ||    
T  4088589 ccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgccatta--acttggatgctgtgagtttgttcgcagat 4088686  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  4088687 tcatcctttacgtttttagcggtgttgaatgaaataatctctcaatttgaatgaatgaatatcattttgtttttgt 4088762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 53 - 200
Target Start/End: Original strand, 25064381 - 25064529
Alignment:
Q  53 cactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttt 149  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||   ||||||||||||| ||||    
T  25064381 cactttaatttcatcatatatttttgtaggcattatgtcgttatatgctatta--acttggatgttgtgagtttgttcgcagattcatcctttacgtttt 25064478  T
Q  150 tagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  25064479 tagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 25064529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 37 - 195
Target Start/End: Complemental strand, 8196355 - 8196196
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||   ||    
T  8196355 ccatgtatattccggtcactttaattttatcgcatatttttgtaggcattatgtcgttatatgctatta--acttggatgctgtgagtgtgttcgcaaat 8196258  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatat 195  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  8196257 tcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 8196196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 23947266 - 23947092
Alignment:
Q  37 ccatgaatattccggtcactttaa-ttttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---a 132  Q
    ||||| |||||| ||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||   |    
T  23947266 ccatggatattctggtcactttaaattttatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgttgtgagtttgttcgtaga 23947169  T
Q  133 ttcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  23947168 ttcatcctttacgtttttagcggcgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 23947092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 8497102 - 8497270
Alignment:
Q  43 atattccggtcactttaattttatcatatactttt-gtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatc 138  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||||||||  ||||||||| ||||||||||||||   |||||||    
T  8497102 atattccggtcactttaatttcatcatatattttttgtaggcattatgccgttatatgctatta--acttggatgctgtgagtttgttcgcagattcatc 8497199  T
Q  139 ctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  8497200 ctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 8497270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 12653074 - 12653246
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| ||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||||   |||    
T  12653074 catggatattccggtcgctttaattttatcatatatttttgtacgcattatgccgttatatgctatta--acttggatgttgtgagtttgttcgcagatt 12653171  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||| ||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||| |||||||||||    
T  12653172 catcctgtacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttgtttttgt 12653246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 43 - 206
Target Start/End: Original strand, 17334888 - 17335052
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||   |||||||     
T  17334888 atattccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgttgtgagtttgttcgcagattcatca 17334985  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgttttt 206  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  17334986 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatgattttttttt 17335052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 28635060 - 28634888
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| ||| ||||||||||||||||||||||| || |||||||||||||||| |||||||||| ||||  |||||||||||||||||||||||   ||||    
T  28635060 catggatactccggtcactttaattttatcatgtatttttgtaggcattatgccgttatatgcgatta--acttggatgttgtgagtttgttcacagatt 28634963  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||    
T  28634962 catcctttacgtttttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaatatcagtttgtttttgt 28634888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 4984514 - 4984351
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  |||| |||| ||| ||||||||||   |||    
T  4984514 catggatattccgatcactttaattttatcatatatttttgtaggcattatgttgttatatgctatta--acttagatgatgtaagtttgttcgcagatt 4984417  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  4984416 catcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 4984351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 7881044 - 7880886
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||  ||||||||| ||||| ||||||||   |||||| |    
T  7881044 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgctgtgactttgttcgcagattcattc 7880947  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  7880946 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 7880886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 33110741 - 33110901
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| || |   |||    
T  33110741 catggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgttgtgagtttatttgcatatt 33110838  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca 197  Q
    |||||||||| ||||| ||  ||||||||||||||||| ||||||||||||||||| ||||||    
T  33110839 catcctttacgtttttggcagtgttgaatgatataatcactcgatttgaatgaatggatatca 33110901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 8028065 - 8027902
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||||| | |||||||||||||  |||| |||| ||||||||||||||   |||    
T  8028065 catggatattccagtcactttaattttatcatatatttttgtaggcattatgccattatatgctatta--actttgatgatgtgagtttgttcgcaaatt 8027968  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||| ||||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  8027967 catcctttacgtttttagcggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattt 8027902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 7027998 - 7028157
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatta-taacttggatgttgtgagtttgttcgattcatcctt 141  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| | |||        |||||    
T  7027998 atattccggtcactttaattttatcatatatttttgtaggcattatggcgttatatgctattattaacttggatgttgtgaatatgt--------tcctt 7028089  T
Q  142 tacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    | |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7028090 tgcattttcagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattttgtttttgt 7028157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 7875986 - 7875828
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||  ||||||||||||||  ||||||||| ||||| ||||||||   |||||| |    
T  7875986 atattccgatcactttaatttcatcatatatttttgtaggcattatgcagttatatgctatta--acttggatgctgtgactttgttcgcagattcattc 7875889  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  7875888 tttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattt 7875828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 16419293 - 16419451
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||  |||||||  ||||||||||||||||   ||||||||     
T  16419293 atattccggtgactttaattttatcatatatttttgtaggcattatgccgtcatatgctat--taacttgattgttgtgagtttgttcgcagattcatct 16419390  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||||||||||| ||||||||| |||||||| ||||||||||||||    
T  16419391 tttacgtttttagcggtgttgaatgatgtaatctctcaatttgaataaatgaatatcattt 16419451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 33740526 - 33740362
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||| |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||  ||||||||||  |||||||||||||   |||    
T  33740526 ccatggatatttcggtcactttaattttatcatatatttttataggcattatgccgttatatgctat--taacttggataatgtgagtttgttcgcagat 33740429  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||  ||||||||||| |||||||| ||||| ||||||||||||| ||||    
T  33740428 tcatcctttacgtttttagcagtgttgaatgatgtaatctcttgatttaaatgaatgaatattattt 33740362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 10228808 - 10228967
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||  ||| ||||||||||   ||    
T  10228808 ccatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatactgtaagtttgttcgcaaat 10228905  T
Q  134 tcatcctttacatttttagcgatgttgaatgatata---atctctcgatttgaatgaatgaa 192  Q
    ||||||||||| |||||| || ||||||||||||||   |||||||||||||||||||||||    
T  10228906 tcatcctttacgtttttaacggtgttgaatgatataattatctctcgatttgaatgaatgaa 10228967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 4468688 - 4468845
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||      ||||||||||||   ||||    
T  4468688 catggatattccggccactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttg------gtgagtttgttcgcagatt 4468779  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| |||||||| ||||||||||| ||| |||||||||| ||||||||||||||||||    
T  4468780 catcctttacacttttagcggtgttgaatgatgtaaactctcgatttaaatgaatgaatatcattt 4468845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 189
Target Start/End: Complemental strand, 16892758 - 16892611
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||  |||||||||||| || |||||||||   || |||||     
T  16892758 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgtcgtaagtttgttcgcagaatcatca 16892661  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaat 189  Q
    ||||| ||||||| | ||||||||||| ||||||||||||||||||||||    
T  16892660 tttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaat 16892611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 200
Target Start/End: Original strand, 12168842 - 12168971
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctatta--taacttggatgttgtgagtttgtt---cgattcatcctttacatttttagcgatgttgaatgatat 168  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||||||| ||    |||||||||||||  ||||||||| ||||||||||| |    
T  12168842 ttttgtaggcattatgtcgttatatgctattaattaactttgatgttgtgagtttattagcagattcatcctttaagtttttagcggtgttgaatgatgt 12168941  T
Q  169 aatctctcgatttgaatgaatgaatatcattt 200  Q
    ||  ||||||||||||||||||||||||||||    
T  12168942 aa--tctcgatttgaatgaatgaatatcattt 12168971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 20619594 - 20619663
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatt 104  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  20619594 gaccatggatattccggtcactttaattttatcatatatttttgtatgaattatgtcgttatatgctatt 20619663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 25337701 - 25337854
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcct 140  Q
    |||||| ||||| |||||||||||||||| ||||||||||||||| | |||||||| |||  ||||||| ||| ||| ||||||||||   ||||||| |    
T  25337701 tattccagtcaccttaattttatcatatatttttgtaggcattatattgttatatgatat--taacttgaatggtgtaagtttgttcgcacattcatcat 25337798  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    ||| ||||||||   |||| |||||| || ||| |  |||||||||||| ||||||    
T  25337799 ttatatttttagtagtgttaaatgatgtactctattaatttgaatgaataaatatc 25337854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 56 - 190
Target Start/End: Complemental strand, 33543553 - 33543421
Alignment:
Q  56 tttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttag 152  Q
    ||||||||||| ||||| |||||||| |||||| | | ||||| ||||||  ||| |||||||||||||||||||   ||||| ||||||||||||        
T  33543553 tttaattttattatatatttttgtagacattatattgctatatactatta--actcggatgttgtgagtttgttcacagattcctcctttacattta--- 33543459  T
Q  153 cgatgttgaatgatataatctctcgatttgaatgaatg 190  Q
    ||||||||||||||||| ||| |||||||||| |||||    
T  33543458 cgatgttgaatgatatactctatcgatttgaaagaatg 33543421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 34489357 - 34489417
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatta 105  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  34489357 tattccggtcactttaattttatc-tatatttttgtagccattatgtcgttatatgctatta 34489417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 3174081 - 3173987
Alignment:
Q  118 tgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||||||   ||||||||||||| || |||||| ||||||||||| |||| | |||||||||||||| |||||| | |||||||||||    
T  3174081 tgtgagtttgttcgcagattcatcctttacgttcttagcggtgttgaatgatgtaatttttcgatttgaatgaacgaatattattttgtttttgt 3173987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 206
Target Start/End: Complemental strand, 7976117 - 7975983
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaat--gatata 169  Q
    |||||||||||| || |||| ||||||||||  |||| | |||||||||||||||||   ||||||||||||  |||||||| ||||||| |  ||| ||    
T  7976117 tttgtaggcattttgccgttgtatgctatta--acttaggtgttgtgagtttgttcgcatattcatcctttatgtttttagcaatgttgattctgatgta 7976020  T
Q  170 atctctcgatttgaatgaatgaatatcatttgttttt 206  Q
     ||| || |||| |||||||||||||| |||||||||    
T  7976019 ttctatcaatttaaatgaatgaatatcgtttgttttt 7975983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 9341581 - 9341443
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| ||||||| ||||||||||  |||||| |||||||||||||||||   ||||| ||||||| |||||||| ||||| | ||  ||| |    
T  9341581 tttgtaggcattttgtcgttgtatgctatta--acttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcaatgtttgtatctgatgt 9341484  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||| ||||  |||||||||||    
T  9341483 actctatcgatttgaatgaatgagtatcgttttgtttttgt 9341443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 20619662 - 20619714
Alignment:
Q  148 tttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  20619662 tttagcggtgttgaatgatataatctcttgatttaaatgaatgaatatcattt 20619714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 31296980 - 31297117
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga--atgatata 169  Q
    |||||||||||| ||||||| ||||||||  ||| ||||||| | ||||||||||||    |||| ||||||| ||||||||||||||||   |||| ||    
T  31296980 tttgtaggcattttgtcgttgtatgctat--taatttggatgatttgagtttgttcgcattttcaccctttacgtttttagcgatgttgattctgatgta 31297077  T
Q  170 atctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
     ||| || |||||||||||||||||||  |||||||||||    
T  31297078 ttctatcaatttgaatgaatgaatatcgttttgtttttgt 31297117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 34489428 - 34489494
Alignment:
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||| | |||||| || |||||| ||||||||||||||| ||||||||||    
T  34489428 tcatcctttacgtttttagcggttttgaataatgtaatctatcgatttgaatgaataaatatcattt 34489494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 606364 - 606502
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || | || ||||||||||  |||||| || ||||||||||||||   ||||| ||||||| |||||| ||||||| | ||  ||| |    
T  606364 tttgtaggcattttgccattgtatgctatta--acttgggtgctgtgagtttgttcgcagattcaccctttacgtttttaacgatgtttgtatctgatgt 606461  T
Q  169 aatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||| |||||||||||    
T  606462 actctatcgatttgaatgaatgaatatcattttgtttttgt 606502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 12170628 - 12170766
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| ||  ||| ||||||||||  |||||| || |||||||||| |||   ||||| |||||||||||||||||||||| | ||  ||| |    
T  12170628 tttgtaggcattttgctgttgtatgctatta--acttgggtgctgtgagtttgctcgcatattcaccctttacatttttagcgatgtttgtatctgatgt 12170725  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  12170726 actctatcgatttgaatgaatgaatatcgttttgtttttgt 12170766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 33053098 - 33052960
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| || |||| ||||||||||  ||||||||| ||||||||||||||   ||||| ||||||| |||||||| ||| ||| |  |||| |    
T  33053098 tttgtaggcattttgccgttgtatgctatta--acttggatgctgtgagtttgttcgcatattcaccctttacgtttttagcaatgtttgtatttgatgt 33053001  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| || |||||||||||||||||||  |||||||||||    
T  33053000 actctatcaatttgaatgaatgaatatcgttttgtttttgt 33052960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 34185566 - 34185495
Alignment:
Q  131 gattcatcctttacatttttagcgatgttgaat--gatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||| | ||||| ||||||||||||||||||  |||||| ||| || |||||||||||||||||||||||    
T  34185566 gattcaccttttacttttttagcgatgttgaatctgatatactctatcaatttgaatgaatgaatatcattt 34185495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 3913504 - 3913379
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || | || ||||||||||  |||||| |||||||||||||||||   || || ||||||| |||||||||||||| | ||  ||| |    
T  3913504 tttgtaggcattttgccattgtatgctatta--acttgggtgttgtgagtttgttcgcagatgcaccctttacgtttttagcgatgtttgtatctgatgt 3913407  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  3913406 actctatcgatttgaatgaatgaatatc 3913379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 20226011 - 20226097
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttg 160  Q
    |||||||||||| ||||||| ||||||||  |||||||| | |||||||||||||||   ||||||| ||||  |||||||||||||||    
T  20226011 tttgtaggcattttgtcgttgtatgctat--taacttgggtattgtgagtttgttcgcaaattcatcatttatgtttttagcgatgttg 20226097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 22119995 - 22120081
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttg 160  Q
    |||||||||||| ||||||| ||||||||  |||||||| | |||||||||||||||   ||||||| ||||  |||||||||||||||    
T  22119995 tttgtaggcattttgtcgttgtatgctat--taacttgggtattgtgagtttgttcgcaaattcatcatttatgtttttagcgatgttg 22120081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 208
Target Start/End: Complemental strand, 8519049 - 8518889
Alignment:
Q  54 actttaattttatcatatacttttgtaggcatta-tgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttt 149  Q
    ||||||||||||||||||| ||||||||  |||| |||||||| |||||||  ||||||| ||| ||||||  |||||   ||||||| | |||| ||||    
T  8519049 actttaattttatcatatatttttgtagatattattgtcgttacatgctat--taacttgaatggtgtgagagtgttcacagattcattccttacgtttt 8518952  T
Q  150 tagcgatgttgaatgatataatctc-----tcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    || |  |||||||||||  ||||||     ||||||| ||||||||||||||| ||||||||||    
T  8518951 taaccgtgttgaatgatgcaatctcttgattcgatttaaatgaatgaatatca-ttgtttttgt 8518889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 23128778 - 23128863
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| || |||| ||||||||||  | |||| || ||||||||||||||   ||||| ||||||||||||||||||||||    
T  23128778 tttgtaggcattttgccgttgtatgctatta--atttgggtgctgtgagtttgttcgcagattcaccctttacatttttagcgatgtt 23128863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 194
Target Start/End: Original strand, 30493692 - 30493815
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaa---tgatat 168  Q
    |||||||||||| || |||| ||||||||||  || ||| |||||||| ||||||||   ||||| ||||||| ||||||||||||||  |   ||||||    
T  30493692 tttgtaggcattttgccgttgtatgctatta--acctgggtgttgtgaatttgttcgcagattcaccctttacgtttttagcgatgttagattctgatat 30493789  T
Q  169 aatctctcgatttgaatgaatgaata 194  Q
    | ||| || |||||||||||||||||    
T  30493790 attctatctatttgaatgaatgaata 30493815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 67927 - 67808
Alignment:
Q  79 taggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatc 172  Q
    |||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||| ||||||| |||||||| ||||| | ||  |||||| ||    
T  67927 taggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcaatgtttgtatctgatatactc 67830  T
Q  173 tctcgatttgaatgaatgaata 194  Q
    | ||||||||||||||||||||    
T  67829 tatcgatttgaatgaatgaata 67808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 14866633 - 14866728
Alignment:
Q  108 acttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||| |||||||||||||||||||   ||||||| ||||  ||||||| |||||| ||| ||||| ||| |  || ||||||||||||||||||||    
T  14866633 acttcgatgttgtgagtttgttcgtaaattcatcatttatgtttttagtgatgttcaataatatactctattaatatgaatgaatgaatatcattt 14866728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 546191 - 546278
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    |||||||||||| || |||| ||||||||  |||||||| || |||||||||||||   |||||||||| ||| ||||||||||| ||||    
T  546191 tttgtaggcattttgccgttgtatgctat--taacttgggtgctgtgagtttgttcgcagattcatcctatacgtttttagcgatattga 546278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 9380183 - 9380270
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga 161  Q
    |||||| ||||| ||||||| ||| |||||||  |||||||||||||||||||||||   ||||| | |||||||||||| | |||||||    
T  9380183 tttgtatgcattttgtcgttgtattctattat--cttggatgttgtgagtttgttcgcatattcaccatttacatttttatcaatgttga 9380270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 30608445 - 30608311
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| |  |||| ||||||||||  |||||||||||||||| ||||| |   ||||||||||||| |||||| ||||| ||| |  |||| |    
T  30608445 tttgtaggcattttaccgttgtatgctatta--acttggatgttgtgagattgtttgcaaattcatcctttacgtttttaacgatgtttgtatctgattt 30608348  T
Q  169 aatctctcgatttgaatgaatgaatatcatttgtttt 205  Q
    | ||| || |||||||||||||||| || ||||||||    
T  30608347 actctatcaatttgaatgaatgaatgtcgtttgtttt 30608311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 32327121 - 32327012
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc-at 198  Q
    |||||||| || ||||||||||||||   ||||| ||||||| |||||||||||||| | ||  ||| || ||| ||||||||||||||||||||||  |    
T  32327121 taacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtt 32327022  T
Q  199 ttgtttttgt 208  Q
    ||||||||||    
T  32327021 ttgtttttgt 32327012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 21426616 - 21426491
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    ||||||| |||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||| | ||||| |||||||||||||| | ||  ||| |    
T  21426616 tttgtagacattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgcatattcaccgtttacgtttttagcgatgtttgtatctgatgt 21426519  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  21426518 actctatcgatttgaatgaatgaatatc 21426491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 32060036 - 32060161
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| |||| || ||||||||  ||| ||||||||||| |||||||||   |||| | |||||||||||||||||| | ||| |  |||| |    
T  32060036 tttgtaggcattttgtcattttatgctat--taaattggatgttgtaagtttgttcgcagatttaccctttacatttttagcgaagtttgtatctgatgt 32060133  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    ||| | || |||||||||||||||||||    
T  32060134 aatatatcaatttgaatgaatgaatatc 32060161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 12165974 - 12166008
Alignment:
Q  43 atattccggtcactttaattttatcatatactttt 77  Q
    |||||||||||||||||||||||||||||| ||||    
T  12165974 atattccggtcactttaattttatcatatattttt 12166008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 29319821 - 29319669
Alignment:
Q  61 ttttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatg 157  Q
    |||||||||||  ||||||| ||||| |  |||| ||||||||||  |||||| |||| |||||||||||   |||||| | ||||| ||||||||||||    
T  29319821 ttttatcatattattttgtaagcattttaccgttgtatgctatta--acttggttgttatgagtttgttcgcagattcaccttttacgtttttagcgatg 29319724  T
Q  158 -ttgaa--tgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
     ||| |  ||||||| | | |  |||||||||||||||||||| |||||||||||    
T  29319723 tttgtatctgatatactttattaatttgaatgaatgaatatcattttgtttttgt 29319669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 4351935 - 4351862
Alignment:
Q  55 ctttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    ||||||| |||||||||| |||||||||||||||||  |||| ||||||  ||||||||| ||| ||||||| ||||    
T  4351935 ctttaatgttatcatatatttttgtaggcattatgt-tttatgtgctat--taacttggacgttttgagtttattcg 4351862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 14801987 - 14802041
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| || |||| ||||||||||  ||||||||| ||||||||||||||    
T  14801987 tttgtaggcattttgccgttgtatgctatta--acttggatgctgtgagtttgttcg 14802041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 6957339 - 6957389
Alignment:
Q  115 tgttgtgagtttgttc---gattcatcctttacatttttagcgatgttgaa 162  Q
    ||||||||||||||||   |||||| ||||||| |||||||||||||||||    
T  6957339 tgttgtgagtttgttcacagattcaccctttacgtttttagcgatgttgaa 6957389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 30776852 - 30776910
Alignment:
Q  106 taacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    |||||||| ||||||||||||||||   |||||| ||||||| ||||||||||| ||||    
T  30776852 taacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatattga 30776910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 44 - 208
Target Start/End: Complemental strand, 9986283 - 9986117
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||   ||||||||||    
T  9986283 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgttgtgagtttgttcgcagattcatcct 9986186  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  9986185 ttacgtttttagcggtgttgaatgatgtaatctctcgatttggatgaatgaatatcattttgtttttgt 9986117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 4228256 - 4228429
Alignment:
Q  38 catgaatattccggtcactttaatttt-atcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    |||| |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||   ||    
T  4228256 catggatattccgatcactttaatttttatcatatatttttgtaggcattatgtcgttatatgctatta--acttggatgttgtgagtttgttcgcagat 4228353  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  4228354 tcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 4228429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 8806000 - 8806163
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||  |||||||||||||||| |||||||   |||    
T  8806000 catggatattccggtcactttaattttatcatatatttttgtaggcattttgccgttatatgctatta--acttggatgttgtgagattgttcgcagatt 8806097  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8806098 catcctttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 8806163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 27249093 - 27248926
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  27249093 atattccggtcactttaatttcatcatatatttttgtacgcattatgccgttatatgctatta--acttggatgttgtgagtttgttcgcagattcatcc 27248996  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27248995 tttacgtttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattttgtttttgt 27248926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 2808420 - 2808248
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||||| |||||||| ||||   |||    
T  2808420 ccatggatattccgatcactttaattttatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgatgtgagtt-gttcacagat 2808324  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  2808323 tcatcctttacgtttttagcgatgttgaatgatacaatctctcgatttgaatgaatgaatatcattttgtttttgt 2808248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 34600347 - 34600520
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||| || ||||||||||   |||    
T  34600347 ccatgaatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgatgcgagtttgttcacagat 34600444  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||||| |||||| |||||||||||    
T  34600445 tcatcctttacgtttttagcggtgttgaacgatgtaatctctcgatttgaatgaatggatatcattttgtttttgt 34600520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 8971570 - 8971403
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||  ||||||||| ||||||||||||||   ||||||||    
T  8971570 atattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctatta--acttggatgctgtgagtttgttcgcatattcatcc 8971473  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  8971472 tttacattcttagcggtgttgaatgatgtaatctctcgatttgaatgaatggatatcattttgtttttgt 8971403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 38575427 - 38575270
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||   |||||||||    
T  38575427 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattat--cttggatgttgtgagtttgttcgcagattcatcc 38575330  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||   |||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  38575329 ttta-tgttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 38575270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 20047030 - 20046866
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  |||||  ||||||||| ||||| ||||||||   ||    
T  20047030 ccatgaatattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatcttatta--acttggatgctgtgattttgttcgcagat 20046933  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  20046932 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattt 20046866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 84128 - 83965
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| ||||||||| |||||||||||||||||||| ||| |||||||||||| |||||||||||||||  ||||||||| ||||||||||||||   |||    
T  84128 catggatattccggccactttaattttatcatatattttcgtaggcattatgccgttatatgctatta--acttggatgctgtgagtttgttcgcagatt 84031  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||| |||||    
T  84030 catcctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaataccattt 83965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 4192976 - 4193143
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||| |||  ||||||| |||||   |||||||||    
T  4192976 atattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttagatactgtgagtgtgttcggagattcatcc 4193073  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| |||||||||  |||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  4193074 tttacgtttttagcggcgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 4193143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 41431159 - 41431325
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg--- 131  Q
    ||||||| |||||||| | ||||||||||||||||||| |||||||||||||||| |||||||| ||||||  ||||||||||||||||||| ||||       
T  41431159 gaccatggatattccgatgactttaattttatcatatatttttgtaggcattatgccgttatatactatta--acttggatgttgtgagtttattcgcag 41431256  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||| ||||||||| ||||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  41431257 atttatcctttacgtttttagcggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattt 41431325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 21570356 - 21570183
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||| ||||||||  ||||||| ||| ||| |||||||||   |||    
T  21570356 ccatgaatattccgttcactttaattttatcatatatttttgtaggcattatgccgttgtatgctat--taacttgaatgctgtaagtttgttcgcagat 21570259  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||| ||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  21570258 tcagcctttatgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 21570183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 27949559 - 27949723
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| ||||||| |||||||||||||||||||||| |||| ||| ||||||| |||| ||||||||||  ||||||||||||||||||||||||   ||    
T  27949559 ccatggatattccagtcactttaattttatcatatatttttatagacattatgacgttgtatgctatta--acttggatgttgtgagtttgttcggagat 27949656  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||| ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  27949657 tcatcatttacgtttttagcggtgttgaatgatataatatctcgatttaaatgaatgaatatcattt 27949723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 7015659 - 7015486
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||||| ||| |||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||   |||    
T  7015659 ccatggatattcccgtcgctttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgctgtgagtttgttcgcagat 7015562  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||| | |||| ||||||||  ||||||||||| |||||||||||||||||||||| ||||||| |||||||||||    
T  7015561 tcattcgttacgtttttagctgtgttgaatgatgtaatctctcgatttgaatgaataaatatcattttgtttttgt 7015486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 25087170 - 25087341
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||||| ||||||||||| |||||||||| |||||||||||||| | |||||||||||||||  ||||||||| |||||||||||||   |||    
T  25087170 ccatggatattccagtcactttaatcttatcatata-ttttgtaggcattaagccgttatatgctatta--acttggatgatgtgagtttgttcccagat 25087266  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| |||| || | ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  25087267 tcatcctttacgtttt-agtggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 25087341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 40626005 - 40625841
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| ||||||||||||||||||||||||  |||  ||||||||||||||| |  |||||||||||||  ||||| ||||| ||||||||||||   ||    
T  40626005 ccatggatattccggtcactttaattttatgttatgtttttgtaggcattatctttttatatgctatta--acttgaatgttatgagtttgttcgcagat 40625908  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  40625907 tcatcatttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatggatgaatatcattt 40625841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 22421867 - 22422034
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||||||||||||||| |||||||||||| |||||||| || ||||   |||||||| ||||  ||||||||| |||||||||||||   |||||||||    
T  22421867 atattccggtcactttagttttatcatatatttttgtagacactatgctattatatgcaatta--acttggatgctgtgagtttgttcacagattcatcc 22421964  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  22421965 tttacgtttttagcggtattgaatgacataatctctcgatttgaatgaatgaatatcattttgtttttgt 22422034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 36234147 - 36234304
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||          ||||||  |||||||||||||||||||||||   |||||||||    
T  36234147 atattccggtcactttaatttcatcatatatttttgtaggcattatg----------ctatta--acttggatgttgtgagtttgttcacagattcatcc 36234234  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  36234235 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 36234304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 30420851 - 30420966
Alignment:
Q  86 tatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttg 182  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  30420851 tatgccgttatatgctatta--acttggatgttgtgagtttgttcgcagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttg 30420948  T
Q  183 aatgaatgaatatcattt 200  Q
    ||||||||||||||||||    
T  30420949 aatgaatgaatatcattt 30420966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 45128337 - 45128489
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcgattca 136  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||| |||||||| ||||||||||||  ||| ||||||||||||||||||             
T  45128337 ccatggatattccggtgactttaattttatcatatatttttgtagacattatgttgttatatgctat--taatttggatgttgtgagtttg--------- 45128425  T
Q  137 tcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||  ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  45128426 tcctttatgtttttagcggtgttgaatgatgtaatctctcgatttgaattaatgaatatcattt 45128489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 74 - 208
Target Start/End: Complemental strand, 31580566 - 31580430
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataa 170  Q
    |||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||   ||||||| ||||| ||||||||| |||  |||||| |||    
T  31580566 ttttgtaggcattatgccgttatatgctatta--acttggatgatgtgagtttgttcgcagattcatcatttacgtttttagcggtgtacaatgatgtaa 31580469  T
Q  171 tctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  31580468 tctctcgatttgaatgaatgaatatcattttgtttttgt 31580430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 41712737 - 41712573
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||  |||||||| |||  ||||||  || ||||||||||||||   |||    
T  41712737 ccatgaatattccggtcattttaattttatcatatatttttgtaggtattatgcagttatatgttat--taacttatatattgtgagtttgttcgcagat 41712640  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    | ||| ||||||||||||| ||||||||||||| |||| | || |||| ||||||||||||||||||    
T  41712639 ttatcatttacatttttagtgatgttgaatgatgtaatttttcaatttaaatgaatgaatatcattt 41712573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 3725319 - 3725486
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||| | |||||||||||||||    ||||||| ||| ||||||||    |||||||||    
T  3725319 atattccgatcactttaattttttcatatatttttgtaggcattacgccgttatatgctattagt--ttggatgatgtaagtttgtttacagattcatcc 3725416  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||| | |||| |||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  3725417 tttacgtttttagtggtgttaaatgatgtaatctctcgatttgaataaatgaatatcattttgtttttgt 3725486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 6174016 - 6174121
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgt 202  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||   |||||    
T  6174016 taacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcggtgttgaatgatataatctctcgatttgaataaatgaataaattttgt 6174115  T
Q  203 ttttgt 208  Q
    ||||||    
T  6174116 ttttgt 6174121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 9374514 - 9374338
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatt--ataacttggatgttgtgagtttgttcg---a 132  Q
    ||||| |||||| | ||||||||||||||||| || ||||||||||||||||||||||||||||| |   ||| ||||||||||||| ||| ||||   |    
T  9374514 catgagtattccagacactttaattttatcatgtatttttgtaggcattatgtcgttatatgctactcattaatttggatgttgtgaattttttcgcata 9374415  T
Q  133 ttcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    |||||| ||||| ||||||||  ||||||||||| || ||| ||||||||||||||||||||||  |||||||||||    
T  9374414 ttcatcatttacgtttttagccgtgttgaatgatgtactctgtcgatttgaatgaatgaatatcgttttgtttttgt 9374338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 3268746 - 3268619
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataa 170  Q
    |||||||||||||||| | ||||||| |||||  ||||||||| |||||||||||| |   |||| || |||| |||||||||| |||||||||||||||    
T  3268746 ttttgtaggcattatgcctttatatggtatta--acttggatgctgtgagtttgtttgcagattcgtcatttatatttttagcggtgttgaatgatataa 3268649  T
Q  171 tctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||||||||||||||||||||    
T  3268648 tctctcgatttgaatgaatgaatatcattt 3268619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 166
Target Start/End: Original strand, 17319460 - 17319583
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||||||||||| |||  |||||||||||| ||||||||||||   ||||||||||    
T  17319460 tattccggtcactttaattttatcatatatttgtataggcattatgtcgttatatgttat--taacttggatgtcgtgagtttgttcgcagattcatcct 17319557  T
Q  141 ttacatttttagcgatgttgaatgat 166  Q
    |||| |||||| || |||||||||||    
T  17319558 ttacgtttttaccggtgttgaatgat 17319583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 40659880 - 40659750
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||||||||||||||||||| || || || || ||||| ||||||| |||||||||||||  |||||||||||||||||||||||||   |||    
T  40659880 ccatggatattccggtcactttaatttcataatttatttctgtagccattatgccgttatatgctat--taacttggatgttgtgagtttgttcgcagat 40659783  T
Q  134 tcatcctttacatttttagcgatgttgaatgat 166  Q
    ||||||||||| ||||||||| |||||||||||    
T  40659782 tcatcctttacgtttttagcggtgttgaatgat 40659750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 27477287 - 27477419
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||  ||||| || ||||  ||||||||||||||||||| |||||   ||||||||     
T  27477287 atatttcggtcactttaattttatcatatatttttgtaggcattataccgttaaatactat--taacttggatgttgtgagtatgttcgcagattcatca 27477384  T
Q  140 tttacatttttagcgatgttgaatgatataatctc 174  Q
    |||||||||||| | |||||||||||| |||||||    
T  27477385 tttacatttttaacaatgttgaatgatgtaatctc 27477419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 32913373 - 32913534
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||||||||||| |||||   |||    
T  32913373 ccatggatattacggtcactttaattttatcatatatttttgtatgcattatgccgttatatgctat--taacttggatgttgtgagtatgttcgcagat 32913470  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||||||  |||||            ||| |||||||||||||||||||||||||||||| |||||||||||    
T  32913471 tcatcctttacgatttta------------gatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 32913534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 33228868 - 33228772
Alignment:
Q  107 aacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| |||| ||||||||||||||   |||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33228868 aacttagatgatgtgagtttgttcgcagattcatccgttacgtttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattt 33228772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 51 - 196
Target Start/End: Complemental strand, 459209 - 459064
Alignment:
Q  51 gtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatt 147  Q
    |||| ||||||||||||||||| |||||||| ||||||| | |||||||||||  |||||| |||||| |||||||||||   |||| ||| ||||  ||    
T  459209 gtcattttaattttatcatatatttttgtagacattatgccattatatgctat--taactttgatgttttgagtttgttcgtagatt-atcttttatgtt 459113  T
Q  148 tttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    ||||| | |||||||||||||| ||| ||||||||||||||||||||||    
T  459112 tttagtggtgttgaatgatatactctatcgatttgaatgaatgaatatc 459064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 38 - 195
Target Start/End: Complemental strand, 37614073 - 37613915
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    ||||| ||||||  ||||||||||||||||||||| ||||||| ||||||||| |||||||| |||  |||||||||||    ||||||||||   ||||    
T  37614073 catgagtattccaatcactttaattttatcatatatttttgtatgcattatgttgttatatgttat--taacttggatgccccgagtttgttcgcagatt 37613976  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatat 195  Q
    ||||||||||  |||||||||||||||||  | || ||| |||||||||||| ||||||||    
T  37613975 catcctttactattttagcgatgttgaatagtgtactctatcgatttgaatggatgaatat 37613915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 32679052 - 32678907
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||| ||||||||||||||||||   ||||||||     
T  32679052 atattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taactt-gatgttgtgagtttgttcgcagattcatca 32678956  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||  |||||||||             |||||||||||||||||||||||||||||||||    
T  32678955 tttatgtttttagcg------------gtaatctctcgatttgaatgaatgaatatcattt 32678907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 33229088 - 33229020
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatta 105  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33229088 ccatggatattccagtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctatta 33229020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 7558652 - 7558749
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| | ||||||||||||   ||||||||||||| ||||||| | |||| |||||| |||||||||||||||||||||||||||||||||    
T  7558652 taacttggatgctatgagtttgttcgcaaattcatcctttacgtttttagtggtgttaaatgatgtaatctctcgatttgaatgaatgaatatcattt 7558749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 21132040 - 21132129
Alignment:
Q  114 atgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||||||||   |||||||| |||| ||||||||| ||||||||||| |||| | ||||||||||||||||||||||||||    
T  21132040 atgttgtgagtttgttcgcagattcatcccttacgtttttagcggtgttgaatgatgtaatttttcgatttgaatgaatgaatatcattt 21132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 24461611 - 24461733
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcga---ttcatcctttacatttttagcgatgttgaatgatataa 170  Q
    ||||||||| ||| ||||||||||||||||||  |||| | |||||||||||||||||    |||||||||||| ||||||||||||||| || || ||     
T  24461611 ttttgtaggtattttgtcgttatatgctatta--actttggtgttgtgagtttgttcgcaggttcatcctttacgtttttagcgatgttg-attatgtat 24461707  T
Q  171 tctctcgatttgaatgaatgaatatc 196  Q
    ||| || |||||||||||||||||||    
T  24461708 tctatcaatttgaatgaatgaatatc 24461733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 26025335 - 26025271
Alignment:
Q  145 atttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  26025335 atttttagcaatgttgaatgatataatctctcaatttgaatgaatgaatatcattttgtttttgt 26025271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 6173765 - 6173832
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatt 104  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  6173765 ccatggatattccggtgactttaattttatcatatatttttgtaggcattatgcagttatatgctatt 6173832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 32448547 - 32448410
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga--atgatata 169  Q
    |||||||||||| || |||| ||||||||||  |||||||||||||||||||||||   |||||||| |||| |||||||| ||| ||||   |||| ||    
T  32448547 tttgtaggcattttgccgttgtatgctatta--acttggatgttgtgagtttgttcatagattcatcatttatatttttagtgatcttgattctgatgta 32448450  T
Q  170 atctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
     ||| || |||||||||||||||||||| |||||||||||    
T  32448449 ttctatcaatttgaatgaatgaatatcattttgtttttgt 32448410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 12236911 - 12236842
Alignment:
Q  131 gattcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||| |||||||||||||||  || |||||||||||||||||| |||| ||||||||||||||||||    
T  12236911 gattcattctttacatttttagcagtgctgaatgatataatctctcaatttaaatgaatgaatatcattt 12236842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 208
Target Start/End: Complemental strand, 39641217 - 39641081
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataa 170  Q
    |||| |||||||||||||||||||||| ||  ||||||||||| ||||||||||||||   |||||| |||||| |||||||   ||||||||||| ||     
T  39641217 ttttataggcattatgtcgttatatgcgat--taacttggatgatgtgagtttgttcgcaaattcattctttacgtttttagtattgttgaatgatgtac 39641120  T
Q  171 tctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    |   |||| |||||||||||||||||  |||||||||||    
T  39641119 ttcatcgagttgaatgaatgaatatcgttttgtttttgt 39641081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 31788625 - 31788763
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||| ||||||||||  ||||||||| ||||||||||||||   ||||| ||||||| |||||||||||||| | ||  ||| |    
T  31788625 tttgtaggcattttgccgttgtatgctatta--acttggatgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatctgatgt 31788722  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  31788723 actctatcgatttgaatgaatgaatatcgttttgtttttgt 31788763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 28037285 - 28037382
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||| || |||||||||||||||   ||||||| |||||||||||| ||||||| |||||| || | | ||||| ||||||||||||||||||||    
T  28037285 taacttgtatattgtgagtttgttcgcaaattcatcatttacatttttaacgatgttaaatgatgtactatatcgatctgaatgaatgaatatcattt 28037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 208
Target Start/End: Original strand, 37994420 - 37994590
Alignment:
Q  41 gaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcat 137  Q
    |||||||||||| | ||  ||||||||||||  ||| ||||||||| ||  ||||||||||||||  |||||| ||||||||||||||||   |||||||    
T  37994420 gaatattccggtgatttagattttatcatattattt-gtaggcattttgctgttatatgctatta--acttgggtgttgtgagtttgttcgcagattcat 37994516  T
Q  138 cctttacatttttagcgatgttga--atgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | |||||  |||||| ||||||||   |||| || ||| || |||||||||||||||||||  |||||||||||    
T  37994517 cttttacgattttagggatgttgattctgatgtattctatcaatttgaatgaatgaatatcgttttgtttttgt 37994590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 36324054 - 36324160
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttg 201  Q
    ||||||||||||||||| ||||||||   |||||||| |||| |||||| |||||||||||||| |||| | || |||||||| |||| |||||  ||||    
T  36324054 taacttggatgttgtgaatttgttcgcgtattcatccgttacgtttttaacgatgttgaatgatgtaatatatcaatttgaataaatgtatatcgttttg 36324153  T
Q  202 tttttgt 208  Q
    |||||||    
T  36324154 tttttgt 36324160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 1421845 - 1421981
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt---cgattcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| ||||||| ||||||||  |||||||| |||||||||||||||    |||||| ||||||| ||||||| |||| ||| |  |||| |    
T  1421845 tttgtaggcattttgtcgttgtatgctat--taacttgggtgttgtgagtttgtttgcagattca-cctttacgtttttagtgatgtttgtatctgatgt 1421941  T
Q  169 aatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    | | | |||||||||||||||||||||||||| |||||||    
T  1421942 actttatcgatttgaatgaatgaatatcatttttttttgt 1421981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 8308337 - 8308388
Alignment:
Q  145 atttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  8308337 atttttagcgatgttgaacgatgtaatctatcgatttgaatgaatgaatatc 8308388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 4100505 - 4100624
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatg-atataa 170  Q
    |||||||||||| || |||| |||| |||||  |||||| |||||||||||||||||   ||||| ||||||| ||||||||||||||   || || |||    
T  4100505 tttgtaggcattttgccgttgtatgatatta--acttgg-tgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt---tgtatgtaa 4100598  T
Q  171 tctctcgatttgaatgaatgaatatc 196  Q
    ||| ||||||||||||||||||||||    
T  4100599 tctatcgatttgaatgaatgaatatc 4100624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 17249078 - 17248950
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga--atgatata 169  Q
    ||||||| |||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||||| ||||| ||||||||||| ||||   |||| ||    
T  17249078 tttgtagacattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgcagattcatcatttacgtttttagcgatcttgattctgatgta 17248981  T
Q  170 atctctcgatttgaatgaatgaatatcattt 200  Q
     | | ||||||||||||||||||||||||||    
T  17248980 ttttatcgatttgaatgaatgaatatcattt 17248950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 32197632 - 32197536
Alignment:
Q  107 aacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||||||||||||||||||   ||| ||||| || |||||||||| ||||||||||| || | | || |||||||||| | ||||||||||    
T  32197632 aacttggatgttgtgagtttgttcgcatatttatcctatatatttttagcggtgttgaatgatgtattatatcaatttgaatgattaaatatcattt 32197536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 4904112 - 4903997
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| ||||| |||| ||||  ||||||||||||  ||| |||| |||| ||||||| ||||||||||  |||||||||||||||||||||||   ||||    
T  4904112 catggatatttcggtgacttagattttatcatattattt-gtagacattttgtcgttgtatgctatta--acttggatgttgtgagtttgttcgtagatt 4904016  T
Q  135 catcctttacatttttagc 153  Q
    || ||||||| ||||||||    
T  4904015 cagcctttacgtttttagc 4903997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 11985135 - 11985029
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatcatt 199  Q
    ||||||||||||||||| ||||||||   ||||||| ||||| |||||||||||||| | ||  ||| || ||| |||||||||||||||||||||| ||    
T  11985135 taacttggatgttgtgaatttgttcgcaaattcatcatttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtt 11985036  T
Q  200 tgttttt 206  Q
    | |||||    
T  11985035 ttttttt 11985029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 1415755 - 1415864
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatca-t 198  Q
    |||||||| |||||||||||||||||   ||||| | || || |||||||||||||| | ||  ||| |||||| ||||||||||||||||||||||| |    
T  1415755 taacttgggtgttgtgagtttgttcgcagattcacctttaacgtttttagcgatgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcatt 1415854  T
Q  199 ttgtttttgt 208  Q
    ||||||||||    
T  1415855 ttgtttttgt 1415864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 10237147 - 10237060
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga 161  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||||||||||   |||||| ||| ||| ||||||||||| ||||    
T  10237147 tttgtaggcattttgtcgttgtatgctat--taacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttagcgatattga 10237060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 18763637 - 18763775
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgat-gttgaa--tgatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| ||||||||||||||||   |||||| ||||||| |||||||||||  ||| |  |||| |    
T  18763637 tttgtaggcattttgccgttttatgctatta--acttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatatttgtatctgatgt 18763734  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| | ||||||||||||||||||||  |||||||||||    
T  18763735 actctattgatttgaatgaatgaatatcgttttgtttttgt 18763775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 30923356 - 30923250
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttg 201  Q
    ||||||| ||||||| ||||||||||   ||||||  |||||  ||||||| ||||| |||||| || ||| || |||||||||||||||||||| ||||    
T  30923356 taacttgaatgttgtaagtttgttcgcagattcattatttacgattttagcaatgttaaatgatgtactctatcaatttgaatgaatgaatatcattttg 30923257  T
Q  202 tttttgt 208  Q
    |||||||    
T  30923256 tttttgt 30923250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 36692043 - 36692181
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| ||||||||||||||||   |||||| ||||||| || ||||||||||| | ||  ||| |    
T  36692043 tttgtaggcattttgccgttttatgctatta--acttggttgttgtgagtttgttcacagattcaccctttacgttcttagcgatgtttgtatctgatgt 36692140  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| |||||||||||||||| |||||  |||||||||||    
T  36692141 actctatcgatttgaatgaatgtatatcgttttgtttttgt 36692181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 13719021 - 13718954
Alignment:
Q  133 ttcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||| ||||| |||||||||||||||||||||  | ||| ||  ||||||||||||||||||||||    
T  13719021 ttcatcatttacgtttttagcgatgttgaatgatgcactctatcattttgaatgaatgaatatcattt 13718954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 23903541 - 23903638
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||| || |||||||||||||   | ||||||||| |||||||| |||| ||||||||| |||||| || |||||||| || || ||||||||    
T  23903541 taacttggaagtcgtgagtttgttcgcaaactcatcctttccatttttaacgatcttgaatgatgtaatctatcaatttgaataaacgagtatcattt 23903638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 35220497 - 35220579
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgat 156  Q
    |||||||||||| ||||||| ||||||||  |||||||| || ||||||||||||||   ||||| ||||||| |||||||||||    
T  35220497 tttgtaggcattttgtcgttgtatgctat--taacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgat 35220579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 7646611 - 7646785
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    ||||| |||| |||| |||| | |||||||||||  ||| ||||||||| || |||| ||||||||||  |||||| ||||||||||||||||   ||||    
T  7646611 catgagtatttcggtgacttaagttttatcatattattt-gtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcagatt 7646707  T
Q  135 catcctttacatttttagcgatgttga---atgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    || | ||||| ||||||||||| || |    |||| || | | ||||||||||||||||||||||  |||||||||||    
T  7646708 caccttttacgtttttagcgatctttatatttgatgtactttatcgatttgaatgaatgaatatcgttttgtttttgt 7646785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 33585666 - 33585581
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    |||||| ||||| || |||| ||||||||||  |||||| |||||||||||||||||   ||||||||||||| |||||| |||||||    
T  33585666 tttgtatgcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcatattcatcctttacgtttttaacgatgtt 33585581  T

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Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 13141714 - 13141787
Alignment:
Q  133 ttcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgttttt 206  Q
    ||||||||||| ||||||| | ||||||| |||| || ||| || ||||||||||| ||||||||||| |||||    
T  13141714 ttcatcctttatatttttaacaatgttgattgatgtagtctgtcaatttgaatgaacgaatatcattttttttt 13141787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 34124585 - 34124677
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatact--tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc 130  Q
    ||||||||||||  ||||||||||||||||||||  |  |||||| ||||| | |||||| ||| ||||||  |||||||| |||||||||||||    
T  34124585 catgaatattccaatcactttaattttatcatattattatttgtatgcattttttcgttacatgttattat--cttggatgctgtgagtttgttc 34124677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 8809451 - 8809533
Alignment:
Q  78 gtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    |||| |||| ||||||| ||||||||||  |||||||||||||||||||||||   ||| |||| ||||| ||||||| ||||||    
T  8809451 gtagacattttgtcgttgtatgctatta--acttggatgttgtgagtttgttcgcagatccatcttttacgtttttagtgatgtt 8809533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 12554112 - 12554022
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttac-atttttagcgatgttgaat 163  Q
    |||||||||||| ||||||| |||| |||||  |||||| ||||||||||||||||   |||||| |||||||  |||||||| |||||||||    
T  12554112 tttgtaggcattttgtcgttgtatgatatta--acttgggtgttgtgagtttgttcgcagattcaccctttacgttttttagcaatgttgaat 12554022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 29173619 - 29173519
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatataatctctcgatttgaatgaatgaatatcatt 199  Q
    |||||| | |||||||||||||||||   ||||||||||||| |||||||||||| ||| |  |||| |||||  || |||||||||||| |||||||||    
T  29173619 taactttggtgttgtgagtttgttcgcagattcatcctttacgtttttagcgatgtttgtatctgatgtaatcaatcaatttgaatgaataaatatcatt 29173520  T
Q  200 t 200  Q
    |    
T  29173519 t 29173519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 31128687 - 31128638
Alignment:
Q  106 taacttggatgttgtgagtttgttc---gattcatcctttacatttttag 152  Q
    |||||||||||||||||||||||||   |||| |||||||||||||||||    
T  31128687 taacttggatgttgtgagtttgttcgcagattaatcctttacatttttag 31128638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 195
Target Start/End: Original strand, 4778922 - 4779046
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || |||| |||| |||||  | |||| || ||||||||||||||   ||||| ||||||| |||||||||||||| | ||  ||| |    
T  4778922 tttgtaggcattttgccgttgtatgttatta--atttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatttgatgt 4779019  T
Q  169 aatctctcgatttgaatgaatgaatat 195  Q
    | ||| |||||||||||||||||||||    
T  4779020 actctatcgatttgaatgaatgaatat 4779046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 17994628 - 17994572
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    ||||||||||||||||||||||||||   |||||||| |||| ||| ||||||||||    
T  17994628 taacttggatgttgtgagtttgttcgcatattcatccgttacgtttgtagcgatgtt 17994572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 5427785 - 5427662
Alignment:
Q  90 tcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttga 183  Q
    ||||| ||||||||||  |||||| || ||||||||||||||   ||||| |||||||  ||||||||||||| | ||  ||| || ||| |||||||||    
T  5427785 tcgttgtatgctatta--acttgggtgctgtgagtttgttcgcagattcaccctttacgcttttagcgatgtttgtatctgatgtactctatcgatttga 5427688  T
Q  184 atgaatgaatatc-atttgtttttgt 208  Q
    |||||||||||||  |||||||||||    
T  5427687 atgaatgaatatcgttttgtttttgt 5427662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 28871690 - 28871631
Alignment:
Q  106 taacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttgaa 162  Q
    ||||||||||| |||||||||||||   |||||| |||||| ||||||||| ||||||||    
T  28871690 taacttggatgctgtgagtttgttcgtggattcaccctttatatttttagcaatgttgaa 28871631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 9169189 - 9169136
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc 130  Q
    |||||||||||| || |||| ||||||||||  ||||||||| |||||||||||||    
T  9169189 tttgtaggcattttgccgttgtatgctatta--acttggatgctgtgagtttgttc 9169136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 14955727 - 14955785
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga 161  Q
    |||||| | |||||||||||||||||   |||||||||||| |||||||||||| ||||    
T  14955727 taacttaggtgttgtgagtttgttcgcagattcatcctttatatttttagcgatattga 14955785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 15690645 - 15690705
Alignment:
Q  146 tttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgttttt 206  Q
    ||||||||||||||||||||| |||  | || |||| |||||||||||||| |||| ||||    
T  15690645 tttttagcgatgttgaatgatgtaacatatcaatttaaatgaatgaatatcgtttgatttt 15690705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 31193234 - 31193129
Alignment:
Q  110 ttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgatttgaatgaatgaatatc-atttgt 202  Q
    |||| |||||||||||||||||   ||||| ||||||| ||||||| |||||| | ||  ||| || ||| ||||||||||||||||||||||  |||||    
T  31193234 ttgggtgttgtgagtttgttcgcaaattcaccctttacgtttttagtgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgt 31193135  T
Q  203 ttttgt 208  Q
    ||||||    
T  31193134 ttttgt 31193129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 1e-55; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 37 - 196
Target Start/End: Complemental strand, 433639 - 433479
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||   ||    
T  433639 ccatgaatattccggtgactttaattttatcatatatttttgtaggcattatgctgttatatgctatta--acttggatgttgtgagtttgttcgcagat 433542  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  433541 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatc 433479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 26492500 - 26492667
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||||||| |||||||||||||   ||||||||     
T  26492500 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctat--taacttggatgctgtgagtttgttcacagattcatct 26492597  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  26492598 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 26492667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 45198981 - 45198808
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||  ||||||||||||||||| ||||||   ||    
T  45198981 ccatggatattccggtcactttgattttatcatatatttttgtaggtattatgtcgttatatactatta--acttggatgttgtgagtatgttcgcagat 45198884  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  45198883 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 45198808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 7640722 - 7640552
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| |||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||   |||    
T  7640722 catggatattctggtcactttaatttcatcatatatttttataggcattatgtcgttatatgctatta--acttggatgttgtgagtttgttcgcagatt 7640625  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    |||| ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  7640624 catcatttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatca-ttgtttttgt 7640552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 32684797 - 32684970
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||  ||||||||| ||| ||||||||||   ||    
T  32684797 ccatggatattccggtcactttagttttatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgctgtaagtttgttcgtagat 32684894  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||| |||||||||||    
T  32684895 tcatcctttacgtttttagcggtgttgaatgatgtagtctctcgatttgaatgaatgaatatcattttgtttttgt 32684970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 22927818 - 22927654
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||| |  |||||| || ||||||||||||||   ||    
T  22927818 ccatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctatca--acttggttgctgtgagtttgttcgcaaat 22927721  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  22927720 tcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaattaatgaatatcattt 22927654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 46822146 - 46822317
Alignment:
Q  39 atgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattc 135  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||   |||||    
T  46822146 atgaatattccgatcactttaatttcatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgctgtgagtttgttcgcagattc 46822243  T
Q  136 atcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||||| |||||||||||    
T  46822244 atcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaattaatatcattttgtttttgt 46822317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 20116717 - 20116874
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||||||   ||||||||     
T  20116717 atattccggtcactttaattttatcaaatatttttgtaggcattatgtcgt-atatgctatta--acttggatgttgtgagtttgttcacagattcatca 20116813  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  20116814 tttacgtttttagcggtgtggaatgatgtaatctctcgatttgaatgaatgaatatcattt 20116874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 23085648 - 23085814
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---g 131  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||  |||||||||||||   |    
T  23085648 gaccatggatattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taatttggatactgtgagtttgttcgcag 23085745  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||    
T  23085746 attcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatcaatataattt 23085814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 26583839 - 26584003
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |  ||| ||| |||||| || |||   ||||    
T  26583839 catgaatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctatta-actttgaatgctgtgagcttattcgcagatt 26583937  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||| |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  26583938 catcctttacgtttttaacgatgttgaatgatgtaatctcacgatttgaatgaatgaatatcattt 26584003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 35496123 - 35495950
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| ||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||   ||    
T  35496123 ccatggatatttcggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgatgtgagtttgttcgtagat 35496026  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||| |||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  35496025 tcatcccttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgattgaatatcattttgtttttgt 35495950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 2843183 - 2843025
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||  || ||| |||| |||||||||||||    ||||||||    
T  2843183 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctat--tagcttagatgctgtgagtttgttcacatattcatcc 2843086  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  2843085 tttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcattt 2843025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 42067010 - 42066837
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| | | || ||| ||||||||  ||||||||||||||||| ||||||   ||    
T  42067010 ccatgaatattccggtcactttaattttatcatatatttttgtaggcataacgccgatatgtgctatta--acttggatgttgtgagtatgttcgcatat 42066913  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    | || |||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  42066912 ttattctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 42066837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 1448772 - 1448607
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||  ||||||||   |||||||||    
T  1448772 atattccgatcactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgttgt--gtttgttcgcagattcatcc 1448677  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||  |||| |||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  1448676 tttaggttttcagcggtgttgaatgatataatatctcgatttgaatgaatgaatatcattttgtttttgt 1448607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 34773846 - 34774013
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||  ||||||||| |||||||||||| |   ||| ||||    
T  34773846 atattccagtcactttaatttcatcatatatttttgtaggcattatatcgttatatactatta--acttggatgctgtgagtttgtttgcagatttatcc 34773943  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  34773944 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 34774013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 6559006 - 6559179
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    |||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||  ||||||||||| | |||||||||||    ||    
T  6559006 ccatgaatattccggtcactttaattttatcatatatttttgcaagcattatgtcgttatatgctat--taacttggatgctatgagtttgttcacatat 6559103  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||| |||||||   ||||||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  6559104 tcatcatttacgtttttagtagtgttgaatgatataatctctcaatttaaatgaatgaatatcattttgtttttgt 6559179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 21266519 - 21266694
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||||||||| |||| |||||| |||||||||||| |||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||   |||    
T  21266519 ccatgaatatttcggtgactttagttttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgctgtgagtttgttcacagat 21266616  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataa--tctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||| ||||||||| ||||||||| | |||  ||||||||||||||||||||||||||| |||||||||||    
T  21266617 tcatcatttacgtttttagcggtgttgaatggtgtaatctctctcgatttgaatgaatgaatatcattttgtttttgt 21266694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 35667180 - 35667016
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||| |||  |||||||||||| ||||||||||||    ||    
T  35667180 ccatggatattccggtcactttaattttatcatatatttttgtatgcattatgttgttatatgatat--taacttggatgtcgtgagtttgttcacaaat 35667083  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||| ||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||||    
T  35667082 tcatcatttacgtttttagcggtgttgaatggtatattctcttgatttgaatgaatgaatatcattt 35667016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 1485205 - 1485040
Alignment:
Q  37 ccatgaatattccggtcactttaattttat-catatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---a 132  Q
    ||||| |||||||||| ||||||||||| | |||||| |||||||||||||||| | |||||||||||||  ||||||||||||| |  |||||||   |    
T  1485205 ccatggatattccggtgactttaatttttttcatatatttttgtaggcattatgcccttatatgctatta--acttggatgttgtaaacttgttcgcaga 1485108  T
Q  133 ttcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  1485107 ttcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 1485040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 17222948 - 17222796
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||   |||||||||||||||||||||||||   |||    
T  17222948 ccatggatattctggtcactttaattttatcatatatttttgtaggcattatgccgttatatgcta--gtaacttggatgttgtgagtttgttcgcagat 17222851  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaat 189  Q
    |||||||||| |||||||||| |||| |||||||| ||||| ||||||||||||||    
T  17222850 tcatcctttatatttttagcggtgttaaatgatat-atctcccgatttgaatgaat 17222796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 208
Target Start/End: Complemental strand, 31235725 - 31235559
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    ||||||| |||||||||||||||||| || |||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||    |||||| ||    
T  31235725 tattccgatcactttaattttatcatgtatttttgtaggcattatgccgttatatgctat--taacttggatgctgtgagtttgttcacaaattcattct 31235628  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||| ||||||||||| ||||||||| ||| || ||||||||||| ||||||||||| |||||||||||    
T  31235627 ttacgtttttagcgatattgaatgatgtaacctatcgatttgaataaatgaatatcagtttgtttttgt 31235559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 208
Target Start/End: Original strand, 35261433 - 35261599
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||  |||||||||| ||||||||||||||   ||||||||||    
T  35261433 tattccggtcactttaattttatcatatatttttgtaggcattatgccgttgtatgctat--taacttggatattgtgagtttgttcgcagattcatcct 35261530  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatt-tgtttttgt 208  Q
    |||  ||||||| | |||| |||||| || ||| || |||||||||||||||||||||| |||||||||    
T  35261531 ttatgtttttagtggtgttaaatgatgtactctatcaatttgaatgaatgaatatcattctgtttttgt 35261599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 46339189 - 46339347
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||||||||||||||||||| |||||||| ||||| | |||||||||||||||||| |||  ||||||||||| |||||||||||||   |||||||||    
T  46339189 atattccggtcactttaatttcatcatatatttttgcatgcattatgtcgttatatgttat--taacttggatgatgtgagtttgttcacagattcatcc 46339286  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| |||||| |  ||||||||||| |||||||| |||||||||||| |||||||||||    
T  46339287 tttacgtttttaacagtgttgaatgatgtaatctcttgatttgaatgaaagaatatcattt 46339347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 42311410 - 42311571
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    |||| |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  |||||||||||   ||||||||||||   |||    
T  42311410 catggatattccggtcactttaattttatcatatatttttgtacgcattatgccgttatatgctat--taacttggatg--ctgagtttgttcgcaaatt 42311505  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||| ||| ||||  |||||||| || |||||||||||||||||| ||||||||||||||    
T  42311506 catcctttacgtttctagcagtgttgaataatgtaatctctcgatttgaataaatgaatatcattt 42311571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 208
Target Start/End: Original strand, 20083474 - 20083640
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||  |||||| |||||| | |||||||||   |||||||| |    
T  20083474 tattccggtcactttagttttatcatatatttttgtaggcattatgtcgttatacgctat--taactttgatgttattagtttgttcgcagattcatcat 20083571  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||||||| |||||||||| |||||| || | | ||||||||||||||| ||||||| |||||||||||    
T  20083572 ttacatttgtagcgatgttaaatgatgtactatatcgatttgaatgaataaatatcattttgtttttgt 20083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 44 - 200
Target Start/End: Complemental strand, 13592450 - 13592294
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||| |||||||||||||   ||||||||||    
T  13592450 tattctggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttcgatgctgtgagtttgttcgcagattcatcct 13592353  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||||||  |||||||| || || ||| ||||||| |||||||| || ||||||    
T  13592352 ttacatttttagcagtgttgaat-atgtactctatcgattttaatgaatggatctcattt 13592294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 23425321 - 23425148
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||||  ||||||||| |||||||||||| |||||||||||||||| ||||||||| |||||  ||||||||| ||| ||| |||||   |||    
T  23425321 ccatggatattctagtcactttacttttatcatatatttttgtaggcattatgccgttatatgttatta--acttggatgctgttagtatgttcatagat 23425224  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||| |||||||||||||||||| || ||||||||  |||||||||||||||||||| |||||||||||    
T  23425223 tcatcatttacgtttttagcgatgttgaataatgtaatctcttaatttgaatgaatgaatatcattttgtttttgt 23425148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 32521876 - 32521717
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    ||||| |||||| | |||||| ||||||||||||| |||||||||||||||| ||||||||| |||  |||||||||||||||||||||||||    |||    
T  32521876 catgagtattccagacacttttattttatcatatatttttgtaggcattatgccgttatatgttat--taacttggatgttgtgagtttgttcacaaatt 32521779  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    ||||||||||  ||||| || ||||||||||| |||||  ||||||||||||||||||||||    
T  32521778 catcctttacgattttaacggtgttgaatgatgtaatccatcgatttgaatgaatgaatatc 32521717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 195
Target Start/End: Original strand, 23786705 - 23786863
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||   ||||| |||| |||||||||||||   ||||    
T  23786705 catggatattcctgtcactttaattttatcatatatttttgtatgcattatgttgttatatgctat--caacttagatgctgtgagtttgttcgcagatt 23786802  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatat 195  Q
    |||| ||||| ||||||||  ||||||||||| ||||||||| | ||||||||||||||||    
T  23786803 catcatttacgtttttagctgtgttgaatgatgtaatctctctaattgaatgaatgaatat 23786863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 19560125 - 19560289
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg--- 131  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||  |||||  || ||||| ||||||||       
T  19560125 gaccatgaatattccggtcactttaattttatcatatatttttgtacacattatgccgttatatgctatta--acttgattgatgtgaatttgttcgtag 19560222  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||  |||||| |||||| ||||||| ||| ||  ||||||||||||| ||||||||||||||||||    
T  19560223 attca--ctttacttttttaacgatgttaaataatgcaatctctcgatttaaatgaatgaatatcattt 19560289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 48208029 - 48208147
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||||||||| | |||   |||    
T  48208029 ccatggatattccggtcactttaattttatcatatatttttgttggcattatgccgttatatgctatt-taacttggatgttgtgagtattttcgcagat 48208127  T
Q  134 tcatcctttacatttttagc 153  Q
    ||||||||||| ||||||||    
T  48208128 tcatcctttacgtttttagc 48208147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 6002159 - 6002329
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    ||||| |||||||||||| ||||||||||||| || |||||||||||||||| | |  ||||||||  ||||||||||| ||||||||| |||   ||||    
T  6002159 catgagtattccggtcaccttaattttatcatgtatttttgtaggcattatgccat--tatgctat--taacttggatgatgtgagtttattcacagatt 6002254  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
     ||| ||||| |||||| ||||||||||| || ||| || ||||||||||||||||||||| | |||||||||||    
T  6002255 tatcatttacgtttttaacgatgttgaataatgtaacctatcgatttgaatgaatgaatattagtttgtttttgt 6002329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 159
Target Start/End: Complemental strand, 46818360 - 46818241
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgta-ggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc-----gattcat 137  Q
    ||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||||||||  |||||||||||||||||||||||||     ||| |||    
T  46818360 tattccgttcactttaattttatcatatatttttgtacgacattatgtcgttatatgctat--taacttggatgttgtgagtttgttcgcagagatacat 46818263  T
Q  138 cctttacatttttagcgatgtt 159  Q
    ||||||| |||||||| |||||    
T  46818262 cctttacgtttttagctatgtt 46818241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 17499622 - 17499537
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||| | |||||||| ||||||||    
T  17499622 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctat--taactttgttgttgtgaatttgttcg 17499537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 17553592 - 17553677
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||| | |||||||| ||||||||    
T  17553592 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctat--taactttgttgttgtgaatttgttcg 17553677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 14627778 - 14627673
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttg 201  Q
    ||||||||||| ||||| ||||||||   ||||||||||||| |||| |||| |||  |||||| |||||||||||||||||||||||||||||| ||||    
T  14627778 taacttggatgctgtgattttgttcgcatattcatcctttacgtttt-agcggtgtcaaatgatgtaatctctcgatttgaatgaatgaatatcattttg 14627680  T
Q  202 tttttgt 208  Q
    |||||||    
T  14627679 tttttgt 14627673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 17611587 - 17611693
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttg 201  Q
    ||||||||||||||||||||||||||   |||||||| |||  |||||||| |||||||||||| || ||| || |||||||||||||||||||  ||||    
T  17611587 taacttggatgttgtgagtttgttcgcagattcatcccttatgtttttagcaatgttgaatgatgtactctatcaatttgaatgaatgaatatcgttttg 17611686  T
Q  202 tttttgt 208  Q
    |||||||    
T  17611687 tttttgt 17611693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 208
Target Start/End: Complemental strand, 37837387 - 37837251
Alignment:
Q  76 ttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatata 169  Q
    ||||||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||| ||||||| |||||||||||||| | ||  ||| ||    
T  37837387 ttgtaggcattttgccgttttatgctatta--acttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgatgtttgtatctgatgta 37837290  T
Q  170 atctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
     ||| |||||||||||||||||||||| |||||||||||    
T  37837289 ctctatcgatttgaatgaatgaatatcgtttgtttttgt 37837251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 14627827 - 14627777
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcatta 87  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  14627827 ccatgaatattccagtcactttaattttatcatatatttttgtaggcatta 14627777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 48316742 - 48316611
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttgaatgatataat 171  Q
    |||||||||||| ||||||| ||||||||  |||||||| || |||||||||||||   |||||| ||||||  ||||||||||||||   || |||| |    
T  48316742 tttgtaggcattttgtcgttgtatgctat--taacttgggtgctgtgagtttgttcgcagattcaccctttaggtttttagcgatgtt---tg-tatact 48316649  T
Q  172 ctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    || ||||||||||||||||||||||  |||||||||||    
T  48316648 ctatcgatttgaatgaatgaatatcgttttgtttttgt 48316611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 34899537 - 34899408
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||| ||||| || |||| ||||||||||  |||||||||||||||||||||||   |||||| ||||||| |||||||||||| ||| |  |||| |    
T  34899537 tttgtatgcattttgccgttgtatgctatta--acttggatgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatttgatgt 34899440  T
Q  169 aatctctcgatttgaatgaatgaatatcattt 200  Q
    | ||| || |||||||||||| ||||||||||    
T  34899439 actctatcaatttgaatgaataaatatcattt 34899408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 37849035 - 37849132
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| |||||||||||| |   ||| || |||||||||||||||| |||||||  |  |||| | ||||||||||||||||||||||||||    
T  37849035 taacttggatgctgtgagtttgtttgcagatttattctttacatttttagcggtgttgaaataagtaatttatcgatttgaatgaatgaatatcattt 37849132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 40993318 - 40993443
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| ||||||| |||| |||||  |||||| |||||||||||||||||   ||||| ||||||| |||||||||||||| | ||  ||| |    
T  40993318 tttgtaggcattttgtcgttgtatgttatta--acttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatctgatgt 40993415  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||| ||||||||||||||    
T  40993416 actctatcgatttaaatgaatgaatatc 40993443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 17611245 - 17611303
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgcta 102  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  17611245 tatttcggtcattttaattttatcatatatttttgtaggcattatatcgctatatgcta 17611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 19404658 - 19404602
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||    
T  19404658 taacttggatgctgtgagtttgttcgcagattcatcctttacatttttagcgatgtt 19404602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 28044699 - 28044548
Alignment:
Q  61 ttttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg 157  Q
    |||||||||||  |||| ||| |||| || |||| ||||||||||  ||||||||||| ||||||||||||   ||||| ||||||| ||||||||||||    
T  28044699 ttttatcatattatttt-tagacattttgccgttgtatgctatta--acttggatgttatgagtttgttcgtagattcaccctttacgtttttagcgatg 28044603  T
Q  158 tt-gaat--gatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    || | ||  ||| || ||| ||||||||||||||||||||||  |||||||||||    
T  28044602 tttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 28044548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 13796859 - 13796805
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||    
T  13796859 tttgtaggcattttgtcgttgtatgctatta--acttggatgttgtgagtttgttcg 13796805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 25255388 - 25255476
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttgaa 162  Q
    |||||||||||| ||||||| ||||||||  |||||| ||||||||||||||||||   ||| || ||||||| ||||||||||| |||||    
T  25255388 tttgtaggcattttgtcgttgtatgctat--taacttagatgttgtgagtttgttcgcagatacaccctttacgtttttagcgatattgaa 25255476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 43369720 - 43369562
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---att 134  Q
    ||||| |||||  |||||||||||||||||||||  |||  |||||||| || |||| |||| |||||  ||||| ||| ||| ||||||||     |||    
T  43369720 catgagtattctagtcactttaattttatcatattattta-taggcattttgccgttgtatgatatta--acttgtatgatgtaagtttgtttacaaatt 43369624  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
     ||||||||| |||| |||||| ||||||||| |||||| || |||| ||||||||||||||    
T  43369623 tatcctttacgttttcagcgatattgaatgatgtaatctatcaatttaaatgaatgaatatc 43369562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 48061583 - 48061721
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaa--tgatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| |||| ||||||||||||   ||||| ||||||| ||||||| |||||| | |  |||| |    
T  48061583 tttgtaggcattttgccgttgtatgctatta--acttgggtgttatgagtttgttcgcagattcaccctttacgtttttagagatgtttgtacctgatgt 48061680  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| ||||||||||||||||||||||  |||||||||||    
T  48061681 actctatcgatttgaatgaatgaatatcgttttgtttttgt 48061721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 12502069 - 12502027
Alignment:
Q  167 ataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  12502069 ataatctctcgatttgaatgaatgaatatcattttgtttttgt 12502027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 12527703 - 12527661
Alignment:
Q  167 ataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  12527703 ataatctctcgatttgaatgaatgaatatcattttgtttttgt 12527661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 14046752 - 14046698
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt 129  Q
    |||||||| ||| ||| ||||||||||||||||||||||||  ||||||||||||    
T  14046752 tttgtaggtattttgttgttatatgctattataacttggataatgtgagtttgtt 14046698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 14356782 - 14356728
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt 129  Q
    |||||||| ||| ||| ||||||||||||||||||||||||  ||||||||||||    
T  14356782 tttgtaggtattttgttgttatatgctattataacttggataatgtgagtttgtt 14356728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 24351181 - 24351239
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga 161  Q
    ||||||||||| | ||||||||||||   ||||||||||||| ||||||||||||||||    
T  24351181 taacttggatgctatgagtttgttcgcagattcatcctttacgtttttagcgatgttga 24351239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 42978773 - 42978856
Alignment:
Q  77 tgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    |||||||||| || |||| ||||||||||  |||||| ||||||||||| |||||   ||||| ||||||| ||||||||||||||    
T  42978773 tgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagttcgttcgcagattcaccctttacgtttttagcgatgtt 42978856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 196
Target Start/End: Complemental strand, 8001472 - 8001351
Alignment:
Q  79 taggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatataatc 172  Q
    |||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||| ||||||| |||||||||||| ||| |  ||||  | ||    
T  8001472 taggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatctgatgcactc 8001375  T
Q  173 tctcgatttgaatgaatgaatatc 196  Q
    | ||||||||||||||||||||||    
T  8001374 tatcgatttgaatgaatgaatatc 8001351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 45349729 - 45349647
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgat 156  Q
    |||||||||||| || |||| ||||||||||  |||||| ||||||||||||||||   | |||| ||||||| |||||||||||    
T  45349729 tttgtaggcattttgccgttttatgctatta--acttgggtgttgtgagtttgttcgcaggttcaccctttacgtttttagcgat 45349647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 48208158 - 48208209
Alignment:
Q  131 gattcatcctttacatttttagcgatgttgaatgatataatctctcgatttg 182  Q
    |||||||||||||| ||||||||| ||||||||||| |||| |||| |||||    
T  48208158 gattcatcctttacgtttttagcggtgttgaatgatgtaatatctcaatttg 48208209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 9977154 - 9977055
Alignment:
Q  60 attttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgat 156  Q
    ||||||||||||  |||| ||| |||| ||||||| ||||||||||  ||||||||||||||| ||| |||   |||||| ||||||| |||||||| ||    
T  9977154 attttatcatattatttt-tagacattttgtcgttgtatgctatta--acttggatgttgtgaattttttcacagattcaccctttacgtttttagcaat 9977058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 12141238 - 12141099
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggat-gttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gata 167  Q
    |||||| ||||| || |||| ||||||||||  |||||| | ||||||||||||||||   ||||| | ||||| |||||||||||||| | ||  |||     
T  12141238 tttgtatgcattttgccgttgtatgctatta--acttgggttgttgtgagtttgttcgcatattcaccttttacgtttttagcgatgtttgtatctgatg 12141141  T
Q  168 taatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    || ||| ||||||||||||||||||||||  |||||||||||    
T  12141140 tactctatcgatttgaatgaatgaatatcgttttgtttttgt 12141099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 38798942 - 38798996
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| || |||  ||||||||||  ||||||||||||||||||||||||    
T  38798942 tttgtaggcattttgccgtcttatgctatta--acttggatgttgtgagtttgttcg 38798996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 23808751 - 23808795
Alignment:
Q  164 gatataatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    |||||| |||||| ||||||||||||||||||| ||| |||||||    
T  23808751 gatatactctctcaatttgaatgaatgaatatcgtttatttttgt 23808795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 43847398 - 43847442
Alignment:
Q  164 gatataatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    |||||| ||| || ||||||||||||||||||||||| |||||||    
T  43847398 gatatactctatcaatttgaatgaatgaatatcatttatttttgt 43847442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 5e-55; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 14906865 - 14906698
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  ||||||||  ||||||||||||||   ||||||||    
T  14906865 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctatta--acttggatcctgtgagtttgttcgcagattcatcc 14906768  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  14906767 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 14906698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 4809106 - 4809264
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||  |||| |||||||||||||||||||   ||||||||    
T  4809106 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctatta--acttagatgttgtgagtttgttcgcagattcatcc 4809203  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  4809204 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 4809264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 29777353 - 29777519
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg--- 131  Q
    ||||||| |||||||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||       
T  29777353 gaccatggatattccggtgactttaatattatcatatatttttggaggcattatgtcgttatatgctatta--acttggatgctgtgagtttgttcgcag 29777450  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  29777451 attcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 29777519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 11725816 - 11725980
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||   |||    
T  11725816 ccatggatactccggtcactttagttttatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgatgtgagtttgttcacagat 11725913  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  11725914 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcattt 11725980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 34611946 - 34612104
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||   ||||||| |    
T  34611946 atattccggtcactttaattttatcatatatttttgtaggcattatcttgttatatgctat--taacttggatgttgtgagtttgttcgcagattcattc 34612043  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||| |||||| |||||| |||||||||||||| ||||||||||||||||||    
T  34612044 tttacgtttttagtgatgttcaatgatgtaatctctcgattttaatgaatgaatatcattt 34612104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 44099882 - 44099711
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||||||||||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| |   ||    
T  44099882 ccatgaatattccg--cactttaattttatcatatatttttgtatgcattatgtcgttatatgctatta--acttggatgttgtgagtttgttagcagat 44099787  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||    
T  44099786 tcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaataaatatcattttgtttttgt 44099711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 9498541 - 9498383
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||| | |||||||||||||  ||||||||| |||||||||||||   |||||||||    
T  9498541 atattcctgtcactttaatttcatcatatatttttgtaggcattatgccattatatgctatta--acttggatgctgtgagtttgttcacagattcatcc 9498444  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||    
T  9498443 tttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattt 9498383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 37565821 - 37565663
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||  ||||||||| ||||||||||||||   ||||||||    
T  37565821 atattccggtcactttgattttatcatatatttttgtaggcattatgctgttatatgctatta--acttggatgctgtgagtttgttcgcaaattcatcc 37565724  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||| | ||||||||||| ||||||||||||||| |||||||||||||||||    
T  37565723 tttacgtttttagtggtgttgaatgatgtaatctctcgatttgcatgaatgaatatcattt 37565663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 32724429 - 32724265
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||   |||    
T  32724429 ccatggatattccggtcactttaatcttatcttatatttttgtaggcattatgtcgttatatactat--taacttggatgttgtgagtttgttcgtagat 32724332  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    | ||||||||| ||||||||| ||||||||||| |||||||||||||  ||||||||||||| ||||    
T  32724331 ttatcctttacgtttttagcggtgttgaatgatgtaatctctcgattcaaatgaatgaatataattt 32724265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 33896218 - 33896386
Alignment:
Q  37 ccatgaatattccggtcactttaattttatc----atatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg- 131  Q
    ||||| |||||||||| ||||||||||||||    ||||| ||||||||||||||||  ||||||||||||||  ||||||||||||||||||| ||||     
T  33896218 ccatggatattccggtgactttaattttatctatcatatatttttgtaggcattatgctgttatatgctatta--acttggatgttgtgagttttttcgc 33896315  T
Q  132 --attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
      ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  33896316 agattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaataaatatcattt 33896386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 43192294 - 43192123
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    ||||||||||||| ||||||||||||||||||||| |||||||  ||||||| |||||||||||||  ||||||||||||| |||||||||||   ||||    
T  43192294 catgaatattccgatcactttaattttatcatatatttttgtatccattatgccgttatatgctat--taacttggatgttctgagtttgttcgcagatt 43192197  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    |||||||||  ||||||||| ||||||||||| |||||||||||||||| |||||| ||||||| | |||||||    
T  43192196 catcctttatgtttttagcggtgttgaatgatgtaatctctcgatttgactgaatggatatcatatttttttgt 43192123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 44578167 - 44578330
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| ||| |||||| ||   ||||    
T  44578167 catggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgatgtaagtttgatcacagatt 44578264  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||| | |||||| |  ||||||||||| |||||||||||||||||| ||||||||||||||    
T  44578265 catcctttgcgtttttaacagtgttgaatgatgtaatctctcgatttgaataaatgaatatcattt 44578330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 55 - 200
Target Start/End: Original strand, 11267162 - 11267308
Alignment:
Q  55 ctttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcga---ttcatcctttacattttta 151  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||    |||||||||||| ||||||    
T  11267162 ctttaattttatcatatatttttgtaggcattatgccgttatatgctatta--acttggatgctgtgagtttgttcgcagtttcatcctttacgttttta 11267259  T
Q  152 gcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  11267260 gcggtgtcgaatgatgtaatctctcgatttgaatgaatgaatatcattt 11267308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 43 - 188
Target Start/End: Original strand, 11464313 - 11464459
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||   |||||||||    
T  11464313 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgatgtgagtttgttcgtagattcatcc 11464410  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaa 188  Q
    ||||| ||||||||| ||||||||||| |||||||||||||| ||||||    
T  11464411 tttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaa 11464459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 9072854 - 9073018
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||| |||||||| | ||||||||||||||||||| ||||||| |||||||  |||||||||||||||  ||||||||| |||||||||| ||   |||    
T  9072854 ccatggatattccgatgactttaattttatcatatatttttgtatgcattattccgttatatgctatta--acttggatgctgtgagtttgctcacagat 9072951  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||| |||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  9072952 tcattctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 9073018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 2656012 - 2656163
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||  ||||||||||| ||||||||||||||   |||||||     
T  2656012 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctat--taacttggatgctgtgagtttgttcgcaaattcatca 2656109  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaat 193  Q
    ||||| ||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  2656110 tttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaat 2656163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 23851436 - 23851269
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||   |||| |||     
T  23851436 atatttcggtaactttaatttcatcatatatttttgtaggcattatgtcgttatatgctat--taacttagatgttgtgagtttgttcgcagatttatct 23851339  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||| | ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  23851338 tttacttttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgattatcattttgtttttgt 23851269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 9619299 - 9619141
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||||||||||||||||| |||||||| ||||||| | |||||| |||||||||||||||  ||||||||| ||||||||||||||   ||||||||    
T  9619299 atattccggtcactttaatttcatcatatatttttgtaagtattatgccgttatatgctatta--acttggatgctgtgagtttgttcgcagattcatcc 9619202  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||||||| ||||||||||| |||| |||| |||||||||||||||||| ||||    
T  9619201 tttacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatataattt 9619141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 208
Target Start/End: Original strand, 28239984 - 28240150
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcct 140  Q
    |||||||||||||||||||||||||| || ||||||| |||||||| |||||||| ||||||  |||| |||| |||||||||||||   ||||||||||    
T  28239984 tattccggtcactttaattttatcatttatttttgtaagcattatgccgttatattctatta--acttagatgctgtgagtttgttcacagattcatcct 28240081  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||| ||||||||||||||||||||  ||| || ||||||||||||||||||||||| |||||||||||    
T  28240082 ttacgtttttagcgatgttgaatgacgtaacctatcgatttgaatgaatgaatatcagtttgtttttgt 28240150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 43890066 - 43889899
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt---cgattcatcc 139  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||  ||||||||||| ||||| ||||||    |||||||||    
T  43890066 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgctgtgattttgtttgcagattcatcc 43889969  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||  |||||||| || ||||||||| |||| ||||||||||||||| |||||||||||    
T  43889968 tttacgtttttagcattgttgaataatgtaatctctcaatttaaatgaatgaatatcattttgtttttgt 43889899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 43135527 - 43135368
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||| ||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||  ||||||||||||||||||| ||||||   ||    
T  43135527 ccatgtatattctggtcactttaattttatcatatattttcgtaggcattatgccgttatatgttat--taacttggatgttgtgagtatgttcgcaaat 43135430  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||| ||||| ||||||||| ||||||     ||||||||||||||||||||||||||||||||||    
T  43135429 tcatcatttacgtttttagcggtgttga-----ataatctctcgatttgaatgaatgaatatcattt 43135368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 33342571 - 33342742
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||||| |||||||||||||  ||||||| ||| |||||||||||||   ||||    
T  33342571 catgagtattcaggtcactttaattttatcatatatatttgtaggcattatgccgttatatgctat--taacttgaatgctgtgagtttgttcgcagatt 33342668  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    |||| |||||| |||||||| |||||||| || |||||| | ||||||||||||||||||||  |||||||||||    
T  33342669 catcatttaca-ttttagcggtgttgaataatgtaatctattgatttgaatgaatgaatatcggtttgtttttgt 33342742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 185
Target Start/End: Complemental strand, 42447975 - 42447826
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gat 133  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||||||||||||    ||    
T  42447975 ccatgaatattccagacactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatgttgtgagtttgttcacatat 42447878  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaat 185  Q
    |||| |||||| |||||||   | ||||||||| |||||| | |||||||||    
T  42447877 tcattctttacgtttttagtagtattgaatgatgtaatctttagatttgaat 42447826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 33298991 - 33299163
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gatt 134  Q
    ||||| |||||  |||||||||||||||||||||| |||| ||||||||||| |||||||||||||  |||||| ||||||||||||||||||   ||||    
T  33298991 catgagtattctagtcactttaattttatcatatatttttataggcattatgccgttatatgctat--taacttagatgttgtgagtttgttcgcagatt 33299088  T
Q  135 catcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    |||| |||||| |||||| | ||||||||||| || ||| || |||| |||||| |||||||  |||||||||||    
T  33299089 catcatttacaattttaggggtgttgaatgatgtattctatcaatttaaatgaaagaatatcgttttgtttttgt 33299163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 16794448 - 16794599
Alignment:
Q  58 taattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcg 154  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| |||||  ||||||||||||||||||||||||   |||||||||||||  ||||| ||    
T  16794448 taattttatcatatatttttgtagacattatgacgttatatggtatta--acttggatgttgtgagtttgttcgcagattcatcctttactattttatcg 16794545  T
Q  155 atgttgaatgatataatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
     | ||||||||| |||| | |||||||||||||||||||||  |||| ||||||    
T  16794546 gtcttgaatgatgtaatatatcgatttgaatgaatgaatattttttgattttgt 16794599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 208
Target Start/End: Complemental strand, 27747055 - 27746890
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt---cgattcatcct 140  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||  ||||||||||||||| | ||| ||    |||||||| |    
T  27747055 tattccggtcacttttattt-atcatatatttttgtaggcattatgtcgttatatgctat--taacttggatgttgtaaatttatttgcagattcatcat 27746959  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    |||| ||||||||| | ||||||||| ||||   | ||||||||||||||||||||  |||||||||||    
T  27746958 ttacgtttttagcggtattgaatgatgtaattcattgatttgaatgaatgaatatcgttttgtttttgt 27746890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 39153084 - 39152930
Alignment:
Q  44 tattccggtcactttaattttatcatatactttt-gtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcc 139  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||| ||||||||  |||| ||||||  |||||||||||   ||||||||    
T  39153084 tattccgatcactttaattttatcatatattttttgtaggcattatgttgttatgtgctatta--acttagatgttaagagtttgttcgcagattcatcc 39152987  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    ||||| ||||||||  |||||||| || || | | ||||||||||||||||||||||    
T  39152986 tttacgtttttagcagtgttgaataatgtactttatcgatttgaatgaatgaatatc 39152930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 19876344 - 19876498
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---g 131  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||          ||    ||||||||||| ||||||| |||||   |    
T  19876344 gaccatggatattccggtcactttaatttgatcatatatttttgtaggcattatg----------ct----taacttggatgctgtgagtatgttcacag 19876429  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||||    
T  19876430 attcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaataaatatcattt 19876498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 11197025 - 11197156
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt---cgattcatcc 139  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||||  ||||||||||||  ||||||||||| ||||||||||||    |||| |||     
T  11197025 atattccgatcactttaattttattatatatttttgtaggcattatgctgttatatgctat--taacttggatgctgtgagtttgtttacagatttatca 11197122  T
Q  140 tttacatttttagcgatgttgaatgatataatct 173  Q
    ||||| |||||| | |||||||||||| ||||||    
T  11197123 tttacgtttttaacaatgttgaatgatgtaatct 11197156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 196
Target Start/End: Complemental strand, 15597110 - 15596956
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    ||||| |||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||  ||||| ||||||||| |||| ||||    ||| |       
T  15597110 atatttcggtcactttaattttctcatatacttttgtatgcattatgtcgatatatgctat--taactcggatgttgtaagttggttcacatatttaaag 15597013  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    ||||| ||||| |||  ||||||||| ||| ||| || |||||||||||||||||||    
T  15597012 tttacgttttttgcggggttgaatgacatactctatcaatttgaatgaatgaatatc 15596956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 17949721 - 17949818
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||| ||||||||| |||||||||||   ||||| |||| || ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||    
T  17949721 taacgtggatgttgggagtttgttcgcagattcacccttcacgtttttagcggtgttgaatgatataatttctcaatttgaatgaatgaatatcattt 17949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 30568249 - 30568111
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgt---tgaatgatat 168  Q
    |||||||||||| || |||| ||||||||||  |||||| ||||||||||||||||   |||||| ||||||| |||||||||||||   |  ||||| |    
T  30568249 tttgtaggcattttgccgttttatgctatta--acttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatatgatgt 30568152  T
Q  169 aatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| || |||||||||||||||||||| |||||||||||    
T  30568151 aatctatcaatttgaatgaatgaatatcattttgtttttgt 30568111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 15047035 - 15047120
Alignment:
Q  44 tattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    ||||||| | ||||||||||||||||||| |||||||||||||||  |||||||||||||  ||||||| ||||||| ||||||||||    
T  15047035 tattccgattactttaattttatcatatatttttgtaggcattataccgttatatgctat--taacttgaatgttgtaagtttgttcg 15047120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 24099166 - 24099047
Alignment:
Q  93 ttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga--atgatataatctctcgatttgaatga 187  Q
    |||||||||||||  |||||||||||||||||||||||   |||||| ||||||| ||||||||||||||||   |||| || ||| || ||||||||||    
T  24099166 ttatatgctatta--acttggatgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgttgattctgatgtattctgtcaatttgaatga 24099069  T
Q  188 atgaatatc-atttgtttttgt 208  Q
    |||||||||  |||||||||||    
T  24099068 atgaatatcgttttgtttttgt 24099047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 1236621 - 1236488
Alignment:
Q  79 taggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaat--gatataatct 173  Q
    |||||||| || |||| ||||||||||  |||||| || ||||||||||||||   ||||||||||||| |||||||| || |||| |  ||| || |||    
T  1236621 taggcattttgccgttgtatgctatta--acttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcaatcttgattctgatgtattct 1236524  T
Q  174 ctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
     ||||||||||||||||||||||| |||||||||||    
T  1236523 atcgatttgaatgaatgaatatcattttgtttttgt 1236488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 23230804 - 23230929
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| ||||||| ||||||||||  |||||| |||||||||||||||||   ||||| | |||||| ||||||||||||| | ||  ||| |    
T  23230804 tttgtaggcattttgtcgttgtatgctatta--acttgggtgttgtgagtttgttcgcagattcaccatttacacttttagcgatgtttgtatctgatgt 23230901  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  23230902 actctatcgatttgaatgaatgaatatc 23230929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 35580593 - 35580660
Alignment:
Q  38 catgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctatta 105  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||||||||| | ||||| |||||||    
T  35580593 catggatattccggtcactttagttttatcatatatttttgtaggcattatgccattatacgctatta 35580660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 15344469 - 15344551
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgat 156  Q
    |||||||||||| ||||||| ||||||||  |||||||| || |||||||||||||   |||||||||||||| |||||||||||    
T  15344469 tttgtaggcattttgtcgttgtatgctat--taacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgat 15344551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 15433534 - 15433616
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgat 156  Q
    |||||||||||| ||||||| ||||||||  |||||||| || |||||||||||||   |||||||||||||| |||||||||||    
T  15433534 tttgtaggcattttgtcgttgtatgctat--taacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgat 15433616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 15524838 - 15524920
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgat 156  Q
    |||||||||||| ||||||| ||||||||  |||||||| || |||||||||||||   |||||||||||||| |||||||||||    
T  15524838 tttgtaggcattttgtcgttgtatgctat--taacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgat 15524920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 16928685 - 16928560
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatat 168  Q
    |||||||||||| || | || ||||||||||  |||||| |||||||||||||||||   ||||| ||||||| |||||||||||||| | ||  ||| |    
T  16928685 tttgtaggcattttgccattgtatgctatta--acttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatctgatgt 16928588  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    | ||| ||||||||||||||||||||||    
T  16928587 actctatcgatttgaatgaatgaatatc 16928560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 45445739 - 45445614
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| ||| ||| ||||||||||  ||||||||||||||||||||||||   ||||| | ||||| |||||| ||||| ||| |  |||| |    
T  45445739 tttgtaggcattttgttgttttatgctatta--acttggatgttgtgagtttgttcgcatattcaccttttacgtttttaacgatgtttgtatctgatgt 45445642  T
Q  169 aatctctcgatttgaatgaatgaatatc 196  Q
    ||||  ||||||||||||||||||||||    
T  45445641 aatccatcgatttgaatgaatgaatatc 45445614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 17949371 - 17949434
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgcta 102  Q
    ||||| ||||| ||||||||||||||||||||||||  |||||||||||||||  |||||||||||    
T  17949371 ccatggatattacggtcactttaattttatcatata--tttgtaggcattatgctgttatatgcta 17949434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 17430728 - 17430663
Alignment:
Q  131 gattcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc 196  Q
    |||| ||||||||| |||||||||||||||||||||||||||| || |||  ||| ||||||||||    
T  17430728 gatttatcctttacgtttttagcgatgttgaatgatataatctatcaattcaaatcaatgaatatc 17430663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 21237978 - 21238072
Alignment:
Q  106 taacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga--atgatataatctctcgatttgaatgaatgaatat 195  Q
    |||| ||| ||||||||||||||||   |||||| ||||||| ||||||||||||||||  ||||| || ||| || ||||||||||||||||||    
T  21237978 taacatgggtgttgtgagtttgttcacagattcaccctttacgtttttagcgatgttgattatgatgtattctatcaatttgaatgaatgaatat 21238072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 31013536 - 31013451
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| || |||| ||||||||||  |||||| ||||||||||||||||   |||||| ||||||| |||||||| |||||    
T  31013536 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcaatgtt 31013451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 37971444 - 37971521
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacattttta 151  Q
    |||||||||||| || |||| ||||||||||  |||||| ||||||||||||||||   |||||| ||||||||||||||    
T  37971444 tttgtaggcattttgccgttgtatgctatta--acttgggtgttgtgagtttgttcgcagattcaccctttacattttta 37971521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 41896678 - 41896732
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| ||||||| ||||||||  |||||||| |||||||||||||||||    
T  41896678 tttgtaggcattttgtcgttgtatgctat--taacttgggtgttgtgagtttgttcg 41896732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 3240548 - 3240630
Alignment:
Q  82 gcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttac--atttttagcgatgttga 161  Q
    ||||| || |||||||||||||||  ||||||||||||||||||| |||   ||||||||||||||   ||||||||||||||||    
T  3240548 gcattttgccgttatatgctatta--acttggatgttgtgagtttattcgcagattcatcctttacgtttttttagcgatgttga 3240630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 7883169 - 7883031
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatg-ttgaa--tgatat 168  Q
    |||||||||||| || |||| ||| ||||||  |||||| || ||||||||||||||   ||||| ||||||| |||||||||||| ||| |  |||| |    
T  7883169 tttgtaggcattttgccgttgtatcctatta--acttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgtatctgatgt 7883072  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| | ||||||||||||||||||||  |||||||||||    
T  7883071 actctattgatttgaatgaatgaatatcgttttgtttttgt 7883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 8867966 - 8868056
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctatt-ataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttga 161  Q
    |||||||||||| ||||||| |||| |||| ||||||||| || ||||||||||||||   ||||| | ||||| |||||||| |||||||    
T  8867966 tttgtaggcattttgtcgttgtatgttatttataacttgggtggtgtgagtttgttcgcaaattcaccttttacgtttttagcaatgttga 8868056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 12654295 - 12654363
Alignment:
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||| ||||| |||||| ||||||| |||||| || | | ||||||||||||||| ||||||||||    
T  12654295 attcatcatttacgtttttaacgatgttaaatgatgtattatatcgatttgaatgaataaatatcattt 12654363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 8412437 - 8412325
Alignment:
Q  88 tgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt-gaat--gatataatctctcgattt 181  Q
    ||||||| ||||||||||  |||||| ||||||||||||||| |   ||||| ||||||  |||||||||||||| | ||  ||| |||||| | |||||    
T  8412437 tgtcgttttatgctatta--acttgggtgttgtgagtttgtttgcagattcaccctttatgtttttagcgatgtttgtatctgatttaatctattgattt 8412340  T
Q  182 gaatgaatgaatatc 196  Q
    |||||||||||||||    
T  8412339 gaatgaatgaatatc 8412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 17427078 - 17427000
Alignment:
Q  131 gattcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    |||| ||||||||| ||||||||||||||||||  | |||||| || |||  ||||||||||||||  |||||||||||    
T  17427078 gatttatcctttacgtttttagcgatgttgaatattgtaatctatcaattcaaatgaatgaatatcgttttgtttttgt 17427000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 17693512 - 17693456
Alignment:
Q  106 taacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    |||||||||||||||||||||| ||   ||||||  |||||||||||||||||||||    
T  17693512 taacttggatgttgtgagtttggtcgtagattcactctttacatttttagcgatgtt 17693456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 27110393 - 27110308
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    ||||||| |||| | ||||| ||||||||||  |||||| |||||||||||||||||   ||||||| ||| ||||||||| ||||||    
T  27110393 tttgtagacattttatcgttgtatgctatta--acttgggtgttgtgagtttgttcgcatattcatcttttgcatttttagtgatgtt 27110308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 14544822 - 14544738
Alignment:
Q  76 ttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    ||||||||||| || |||| | ||||||||  ||||||||| |||||||||||| |   |||||||| |||| ||||||||||||||    
T  14544822 ttgtaggcattttgccgttgtttgctatta--acttggatggtgtgagtttgtttgcagattcatccattacgtttttagcgatgtt 14544738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 18890627 - 18890573
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg 131  Q
    |||||||||||| ||||||| ||||||||  |||||||| || ||||||||||||||    
T  18890627 tttgtaggcattttgtcgttgtatgctat--taacttgggtgctgtgagtttgttcg 18890573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 42046497 - 42046530
Alignment:
Q  175 tcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    |||||||||||||||||||||| |||||||||||    
T  42046497 tcgatttgaatgaatgaatatcctttgtttttgt 42046530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 6314922 - 6314962
Alignment:
Q  168 taatctctcgatttgaatgaatgaatatcatttgtttttgt 208  Q
    |||||| || ||||||||||||||||||||||| |||||||    
T  6314922 taatctatcaatttgaatgaatgaatatcatttatttttgt 6314962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 18994201 - 18994272
Alignment:
Q  86 tatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgat 156  Q
    ||||||||| ||||||||||  || |||||||||||| |||||||   ||||||||||||  ||||||||||||    
T  18994201 tatgtcgttttatgctatta--acatggatgttgtgattttgttcgcagattcatcctttttatttttagcgat 18994272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 16262 - 16095
Alignment:
Q  43 atattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcc 139  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||   ||||| |||    
T  16262 atattccggtcactttaattttattatatatttttgtaggcattatgtcgttatatgctat--taacttggatgatgtgagtttgttcgctgattcttcc 16165  T
Q  140 tttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||| ||||||||| ||||||||||| |||| |||| |||||||||||||||||||| |||||||||||    
T  16164 tttacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatatcattttgtttttgt 16095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 8818 - 8984
Alignment:
Q  35 gaccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---g 131  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||  || ||||||||||        
T  8818 gaccatggatattctggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatactgcgagtttgttcacat 8915  T
Q  132 attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    |||||||||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||||    
T  8916 attcatcctttacattttaaacggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattt 8984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 201321 - 201148
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| |  ||||||  ||||||| |||||    ||    
T  201321 ccatggatattccggtcactttaattttatcatatatttttgtaggcatcatgccgttatatgctattaaa--ttggattctgtgagtatgttcacaaat 201224  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    ||||||||||||||||||| | ||||||||||| |||||| ||||||||||||||||||||||| |||||||||||    
T  201223 tcatcctttacatttttagtggtgttgaatgatgtaatctatcgatttgaatgaatgaatatcattttgtttttgt 201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 46 - 208
Target Start/End: Complemental strand, 83377 - 83212
Alignment:
Q  46 ttccggtcactttaattttatcatatacttttgtaggcat--tatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcct 140  Q
    |||||||||||||||||||| |||| | ||||||||||||  |||| |||||||||||||||  ||||||||||||||||||||||||   ||||||| |    
T  83377 ttccggtcactttaattttaccatacatttttgtaggcatattatgccgttatatgctatta--acttggatgttgtgagtttgttcgcagattcatcat 83280  T
Q  141 ttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatca-tttgtttttgt 208  Q
    |||| ||||||||||| ||||||||| |||||||| ||||||||||||||||||||| |||||||||||    
T  83279 ttacgtttttagcgat-ttgaatgatgtaatctcttgatttgaatgaatgaatatcattttgtttttgt 83212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 5527 - 5686
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||  ||| ||||||||||   ||    
T  5527 ccatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctat--taacttggatactgtaagtttgttcgcaaat 5624  T
Q  134 tcatcctttacatttttagcgatgttgaatgatata---atctctcgatttgaatgaatgaa 192  Q
    ||||||||||| |||||| || ||||||||||||||   |||||||||||||||||||||||    
T  5625 tcatcctttacgtttttaacggtgttgaatgatataattatctctcgatttgaatgaatgaa 5686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 361747 - 361583
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---at 133  Q
    ||||| ||| ||| |||||||||||||| ||||||| |||||||||||||||| ||||||||| | |||  ||||||||||||||||| ||||||   ||    
T  361747 ccatggatactccagtcactttaattttctcatatatttttgtaggcattatgccgttatatgttgtta--acttggatgttgtgagtgtgttcgcagat 361650  T
Q  134 tcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    | ||||||||| ||||||||| ||||||||||| ||||||||| || ||||||||||||||||||||    
T  361649 ttatcctttacgtttttagcggtgttgaatgatgtaatctctcaatatgaatgaatgaatatcattt 361583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 6434 - 6523
Alignment:
Q  37 ccatgaatattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgt 128  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  6434 ccatgaataatccggtcactttagttttatcatatatttttgtatgcattatgtcgttatatgctat--taacttggatgttgtgagtttgt 6523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 107 - 200
Target Start/End: Original strand, 4402 - 4498
Alignment:
Q  107 aacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||||||||||||||||| |   |||||||| |||| ||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||    
T  4402 aacttggatgttgtgagtttgtttgcagattcatcccttacgtttttagcggtgttgaatgatgtaatctcttgatttaaatgaatgaatatcattt 4498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 208
Target Start/End: Complemental strand, 58019 - 57881
Alignment:
Q  74 ttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgttga--atgatat 168  Q
    ||||||||||||| || |||||||||||||  ||||||||||| |||||||||||||   |||| ||||||||| |||||||||||||| |   |||| |    
T  58019 ttttgtaggcattttgccgttatatgctat--taacttggatgctgtgagtttgttcgcagatttatcctttacgtttttagcgatgttaattctgatgt 57922  T
Q  169 aatctctcgatttgaatgaatgaatatc-atttgtttttgt 208  Q
    | ||| || |||| ||||||||||||||  |||||||||||    
T  57921 attctatcaatttaaatgaatgaatatcgttttgtttttgt 57881  T

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Target: scaffold0113 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 36571 - 36465
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttg 201  Q
    ||||||| || |||||||||||||||   ||||||| ||||| ||||||||||||||||||||  || ||| || ||||||||||| |||||||  ||||    
T  36571 taacttgtatattgtgagtttgttcgttgattcatcatttacgtttttagcgatgttgaatgaagtactctatcaatttgaatgaaagaatatcgttttg 36472  T
Q  202 tttttgt 208  Q
    |||||||    
T  36471 tttttgt 36465  T

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Target: scaffold0445 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 1503 - 1588
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgtt---cgattcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| || |||| ||||||||||  ||||||||||||||||||||||    |||||| ||||||| ||||||||||||||    
T  1503 tttgtaggcattttgccgttttatgctatta--acttggatgttgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 1588  T

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Target: scaffold0372 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 9552 - 9455
Alignment:
Q  106 taacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatcattt 200  Q
    ||||||||| || |||||||||||||   | ||||||||| |||||||| |||| ||||||||| |||||| || |||||||| || || ||||||||    
T  9552 taacttggaagtcgtgagtttgttcgcaaactcatcctttccatttttaacgatcttgaatgatgtaatctatcaatttgaataaacgagtatcattt 9455  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 34720 - 34600
Alignment:
Q  46 ttccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatccttt 142  Q
    |||| |||||||||||||||||||||   |||||||||||| ||| ||| |||||   | |||||| |||||||| |||||||||   |||||||||| |    
T  34720 ttccagtcactttaattttatcatat-tatttgtaggcattttgttgttgtatgc--ctttaacttagatgttgtaagtttgttcgcagattcatcctct 34624  T
Q  143 acatttttagcgatgttgaatgat 166  Q
    | |||||||  |||||||||||||    
T  34623 atatttttattgatgttgaatgat 34600  T

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Target: scaffold0050 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 65972 - 65887
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| ||||||| ||||||||  |||||||  |||| |||||||||||   |||||| |||||||||||||| |||||||    
T  65972 tttgtaggcattttgtcgttgtatgctat--taacttgagtgttatgagtttgttcgcagattcaccctttacatttttaccgatgtt 65887  T

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Target: scaffold0127 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 15651 - 15736
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| || |||||||||||||  |||||||| || |||||||||||||   ||||||  |||||  ||||||||||||||    
T  15651 tttgtaggcattttgccgttatatgctat--taacttgggtgctgtgagtttgttcgcagattcactctttatgtttttagcgatgtt 15736  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 71230 - 71145
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| ||| ||| ||||||||||  |||||| |||||| |||||||| |   ||| ||||||||| ||||||||||||||    
T  71230 tttgtaggcattttgttgttgtatgctatta--acttgggtgttgtaagtttgtttgtagattaatcctttacgtttttagcgatgtt 71145  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 71800 - 71715
Alignment:
Q  75 tttgtaggcattatgtcgttatatgctattataacttggatgttgtgagtttgttc---gattcatcctttacatttttagcgatgtt 159  Q
    |||||||||||| || |||| ||||||||  |||||||| || |||||||||||||   |||||| ||||||| ||| ||||||||||    
T  71800 tttgtaggcattttgccgttgtatgctat--taacttgggtgctgtgagtttgttcggagattcaccctttacgtttctagcgatgtt 71715  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 14783 - 14716
Alignment:
Q  93 ttatatgctattataacttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgtt 159  Q
    |||||||||||||  |||||| || ||||||||||||||   |||||||||||| |||||||| ||||||    
T  14783 ttatatgctatta--acttgggtgctgtgagtttgttcgcaaattcatcctttatatttttagtgatgtt 14716  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 53295 - 53193
Alignment:
Q  110 ttggatgttgtgagtttgttcg---attcatcctttacatttttagcgatgttgaatgatataatctctcgatttgaatgaatgaatatc-atttgtttt 205  Q
    ||||| ||||| ||||||||||   ||| ||| ||||  ||||||| ||||||||||||| || | | || |||||||||||||||||||  ||||||||    
T  53295 ttggaggttgttagtttgttcgtagatttatcttttatgtttttagtgatgttgaatgatgtactatatcaatttgaatgaatgaatatcgttttgtttt 53196  T
Q  206 tgt 208  Q
    |||    
T  53195 tgt 53193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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