View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6529_low_18 (Length: 254)
Name: NF6529_low_18
Description: NF6529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6529_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 9126431 - 9126668
Alignment:
| Q |
1 |
tctcgaccaacaataagtctttcagggaaaataggctaatcctcggtatttgtctcactgctcctttgcctcatccaacccctagtgaagatgtattatc |
100 |
Q |
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| T |
9126431 |
tctcgaccaacaataagtctttcagggaaaacaggctaatcctcggtatctgtctcactgctcctttgcctcatccaaaccctagtgaagatgtattatc |
9126530 |
T |
|
| Q |
101 |
attatgaggttttctcttcatgtagatcttcaaagaaggatccacatacgattttatttccttttctcgcaaaatcaactagatagctgaccttgtggct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||| | |
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| T |
9126531 |
attatgaggttttctcttcatgtagatcttcaaagaaggatccacatacaattttatttctttttctcgtaaaattaactagatagctgaccttgtggtt |
9126630 |
T |
|
| Q |
201 |
atccattttaatttgaacataatggaactttttgtttt |
238 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
9126631 |
atccattttaatttgaacataatggaactttttgtttt |
9126668 |
T |
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