View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6530_high_16 (Length: 201)
Name: NF6530_high_16
Description: NF6530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6530_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 21649183 - 21649021
Alignment:
| Q |
23 |
aaaacaaatctttagacttgcattaatctgttcccaccgaccacattatatttagtcccgcctaaaagaccaataaacttaccatatttgattgtttcag |
122 |
Q |
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| T |
21649183 |
aaaaaaaatctttaaacttgcattaatttgttcccaccgaccacattatatttagtcccgcctaaaagaccaataaacttaccatatttgattgtttcag |
21649084 |
T |
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| Q |
123 |
acactacaaataaacgtaacctttcgtcaatcgatcacaactcattttcattctctccttgtt |
185 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
21649083 |
acactacaaataaacgtaacctttcgtcaattgatcacaactcattttcattctctccttgtt |
21649021 |
T |
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