View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6530_high_3 (Length: 504)

Name: NF6530_high_3
Description: NF6530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6530_high_3
NF6530_high_3
[»] chr3 (70 HSPs)
chr3 (115-489)||(10251714-10252088)
chr3 (115-489)||(10114615-10114988)
chr3 (326-485)||(22479099-22479258)
chr3 (327-489)||(22456049-22456211)
chr3 (328-489)||(2994459-2994620)
chr3 (354-489)||(10014212-10014346)
chr3 (327-489)||(21214156-21214318)
chr3 (329-489)||(47444014-47444177)
chr3 (327-487)||(38401295-38401455)
chr3 (327-489)||(49583880-49584042)
chr3 (343-487)||(48291752-48291897)
chr3 (331-489)||(34194807-34194965)
chr3 (328-489)||(30454766-30454927)
chr3 (9-118)||(10114472-10114577)
chr3 (9-118)||(10251571-10251676)
chr3 (327-468)||(54725665-54725806)
chr3 (342-489)||(7886658-7886806)
chr3 (330-489)||(25242219-25242379)
chr3 (366-487)||(8097061-8097182)
chr3 (327-439)||(23209371-23209483)
chr3 (375-480)||(29676496-29676602)
chr3 (327-468)||(32070162-32070302)
chr3 (327-484)||(7614967-7615122)
chr3 (335-487)||(6784257-6784399)
chr3 (292-469)||(26641176-26641352)
chr3 (327-469)||(23513482-23513623)
chr3 (291-443)||(55400617-55400768)
chr3 (327-469)||(21654159-21654301)
chr3 (327-469)||(1335025-1335166)
chr3 (289-443)||(36189096-36189249)
chr3 (391-489)||(46918254-46918352)
chr3 (327-469)||(31126127-31126268)
chr3 (332-441)||(13541197-13541305)
chr3 (327-424)||(45781312-45781408)
chr3 (352-489)||(16033028-16033165)
chr3 (327-397)||(33974711-33974781)
chr3 (327-412)||(2927190-2927275)
chr3 (329-424)||(16739264-16739358)
chr3 (363-472)||(17587665-17587774)
chr3 (326-469)||(46580450-46580592)
chr3 (335-469)||(53020105-53020239)
chr3 (292-439)||(27876005-27876153)
chr3 (327-397)||(14752360-14752430)
chr3 (328-414)||(41935538-41935623)
chr3 (343-468)||(12128732-12128856)
chr3 (329-396)||(28793078-28793143)
chr3 (327-469)||(32322303-32322444)
chr3 (330-469)||(43575876-43576013)
chr3 (326-382)||(46711826-46711882)
chr3 (327-412)||(34022536-34022620)
chr3 (332-443)||(37324174-37324288)
chr3 (327-443)||(46819964-46820079)
chr3 (416-489)||(20847309-20847382)
chr3 (326-391)||(37074859-37074924)
chr3 (327-372)||(45347828-45347873)
chr3 (327-412)||(50651174-50651259)
chr3 (327-391)||(28875308-28875372)
chr3 (329-469)||(51255105-51255242)
chr3 (327-382)||(7866650-7866705)
chr3 (327-469)||(51426532-51426675)
chr3 (327-392)||(6074984-6075049)
chr3 (328-373)||(11054453-11054498)
chr3 (335-392)||(31836862-31836919)
chr3 (416-489)||(35963162-35963235)
chr3 (416-489)||(37042458-37042531)
chr3 (330-423)||(44566895-44566987)
chr3 (327-372)||(49067028-49067073)
chr3 (327-382)||(6437981-6438037)
chr3 (347-469)||(46296141-46296262)
chr3 (327-359)||(49068473-49068505)
[»] chr6 (29 HSPs)
chr6 (115-381)||(16013580-16013848)
chr6 (327-489)||(4031902-4032064)
chr6 (327-489)||(3888342-3888504)
chr6 (329-487)||(4987860-4988018)
chr6 (292-468)||(5300696-5300871)
chr6 (9-118)||(16013886-16013991)
chr6 (375-489)||(16524343-16524456)
chr6 (354-487)||(15830637-15830770)
chr6 (327-413)||(1130434-1130520)
chr6 (326-469)||(17598206-17598348)
chr6 (287-469)||(31887223-31887405)
chr6 (332-469)||(17721911-17722047)
chr6 (329-469)||(30949051-30949190)
chr6 (432-489)||(16013514-16013571)
chr6 (332-469)||(374018-374154)
chr6 (327-429)||(5822162-5822265)
chr6 (293-469)||(12278586-12278761)
chr6 (327-441)||(10227826-10227939)
chr6 (327-469)||(30766360-30766501)
chr6 (327-469)||(33756170-33756311)
chr6 (327-414)||(5881909-5881996)
chr6 (326-408)||(13854852-13854933)
chr6 (327-391)||(7275076-7275140)
chr6 (292-370)||(32882882-32882960)
chr6 (416-489)||(3095801-3095874)
chr6 (328-373)||(3095907-3095952)
chr6 (328-373)||(21542348-21542393)
chr6 (416-489)||(35129137-35129210)
chr6 (326-413)||(2851474-2851561)
[»] chr4 (54 HSPs)
chr4 (289-489)||(23978190-23978390)
chr4 (327-489)||(28318492-28318654)
chr4 (327-489)||(37911799-37911961)
chr4 (327-489)||(28142697-28142859)
chr4 (291-489)||(46070597-46070794)
chr4 (328-489)||(47516266-47516427)
chr4 (290-487)||(32410209-32410403)
chr4 (326-489)||(8178314-8178476)
chr4 (329-489)||(49080172-49080334)
chr4 (329-489)||(40411018-40411178)
chr4 (399-489)||(5064730-5064820)
chr4 (326-487)||(5841856-5842017)
chr4 (327-466)||(8013187-8013326)
chr4 (289-444)||(38940742-38940896)
chr4 (327-489)||(40553685-40553846)
chr4 (327-460)||(53848382-53848515)
chr4 (327-469)||(32012395-32012536)
chr4 (286-469)||(29180480-29180662)
chr4 (329-489)||(29511363-29511502)
chr4 (335-469)||(30776552-30776685)
chr4 (335-469)||(30777406-30777539)
chr4 (327-469)||(53677547-53677688)
chr4 (327-469)||(50768356-50768497)
chr4 (327-469)||(37788362-37788503)
chr4 (287-469)||(52712934-52713115)
chr4 (327-429)||(55937811-55937912)
chr4 (289-441)||(3043263-3043414)
chr4 (327-469)||(39970057-39970198)
chr4 (327-441)||(43980409-43980522)
chr4 (327-397)||(17186968-17187038)
chr4 (335-384)||(4512954-4513003)
chr4 (327-408)||(35310918-35310999)
chr4 (327-469)||(49901937-49902079)
chr4 (327-469)||(38187794-38187935)
chr4 (328-443)||(30012046-30012161)
chr4 (327-443)||(29899626-29899741)
chr4 (327-469)||(1619940-1620081)
chr4 (327-441)||(9798171-9798284)
chr4 (326-443)||(27750442-27750558)
chr4 (327-397)||(16605021-16605091)
chr4 (329-391)||(42915427-42915489)
chr4 (335-442)||(10591598-10591703)
chr4 (381-469)||(47807158-47807247)
chr4 (327-412)||(48793798-48793882)
chr4 (381-469)||(51495112-51495201)
chr4 (328-392)||(35529568-35529632)
chr4 (331-397)||(4058614-4058680)
chr4 (327-381)||(39078053-39078107)
chr4 (328-373)||(2229175-2229220)
chr4 (416-489)||(4058719-4058792)
chr4 (328-373)||(14332687-14332732)
chr4 (333-413)||(21181086-21181166)
chr4 (328-373)||(26916253-26916298)
chr4 (327-371)||(55580563-55580607)
[»] chr2 (47 HSPs)
chr2 (326-489)||(26998233-26998396)
chr2 (327-489)||(38070913-38071074)
chr2 (331-489)||(32273592-32273750)
chr2 (328-483)||(20380041-20380196)
chr2 (293-487)||(32009985-32010179)
chr2 (343-489)||(4891720-4891866)
chr2 (327-489)||(44442050-44442210)
chr2 (328-489)||(9709432-9709592)
chr2 (331-468)||(11031025-11031162)
chr2 (115-289)||(21405163-21405331)
chr2 (329-489)||(8032749-8032910)
chr2 (289-469)||(21539633-21539812)
chr2 (286-469)||(792457-792639)
chr2 (329-437)||(16179833-16179940)
chr2 (327-469)||(29514120-29514261)
chr2 (329-469)||(28492436-28492575)
chr2 (327-443)||(38549770-38549885)
chr2 (327-469)||(33635250-33635391)
chr2 (291-440)||(15858740-15858888)
chr2 (332-469)||(28424193-28424329)
chr2 (329-469)||(4033776-4033915)
chr2 (335-443)||(43075672-43075779)
chr2 (332-469)||(14565474-14565611)
chr2 (9-96)||(21404962-21405044)
chr2 (327-441)||(8784309-8784422)
chr2 (289-443)||(29514602-29514754)
chr2 (327-397)||(19263997-19264067)
chr2 (327-412)||(8701499-8701584)
chr2 (327-392)||(28858207-28858272)
chr2 (326-466)||(33933023-33933164)
chr2 (327-443)||(4091924-4092040)
chr2 (332-441)||(35832331-35832439)
chr2 (327-382)||(45660260-45660315)
chr2 (342-439)||(921677-921775)
chr2 (290-414)||(10979069-10979191)
chr2 (327-397)||(25571942-25572012)
chr2 (291-372)||(15068624-15068705)
chr2 (328-469)||(18834011-18834153)
chr2 (327-392)||(33198832-33198897)
chr2 (329-392)||(5280678-5280741)
chr2 (417-484)||(30830682-30830749)
chr2 (328-373)||(6110386-6110431)
chr2 (402-443)||(15068723-15068764)
chr2 (381-441)||(22162286-22162347)
chr2 (327-469)||(10478089-10478233)
chr2 (327-391)||(29524239-29524303)
chr2 (417-489)||(40584479-40584551)
[»] chr1 (73 HSPs)
chr1 (326-489)||(7397623-7397785)
chr1 (327-489)||(16661432-16661595)
chr1 (329-489)||(37538728-37538888)
chr1 (327-489)||(5858453-5858616)
chr1 (291-487)||(41063622-41063818)
chr1 (342-489)||(13351612-13351759)
chr1 (327-489)||(15912117-15912277)
chr1 (378-489)||(25185386-25185497)
chr1 (327-489)||(34102055-34102215)
chr1 (326-443)||(35366331-35366448)
chr1 (343-487)||(30701469-30701611)
chr1 (327-489)||(5950356-5950518)
chr1 (384-489)||(44510301-44510406)
chr1 (329-461)||(43359609-43359741)
chr1 (327-489)||(45840147-45840292)
chr1 (354-446)||(13050294-13050386)
chr1 (327-469)||(26907194-26907335)
chr1 (326-429)||(51339040-51339143)
chr1 (327-462)||(18036459-18036592)
chr1 (327-469)||(44875093-44875234)
chr1 (326-429)||(51840638-51840741)
chr1 (327-469)||(23873932-23874073)
chr1 (327-469)||(25990662-25990803)
chr1 (327-469)||(29488662-29488803)
chr1 (327-469)||(40219971-40220111)
chr1 (327-468)||(46804634-46804775)
chr1 (290-469)||(46949198-46949376)
chr1 (327-469)||(35941755-35941896)
chr1 (327-469)||(38942546-38942687)
chr1 (326-443)||(4529100-4529216)
chr1 (292-429)||(49924298-49924434)
chr1 (327-468)||(8889793-8889927)
chr1 (326-469)||(39026351-39026492)
chr1 (389-489)||(16688115-16688215)
chr1 (327-441)||(28017572-28017685)
chr1 (291-443)||(36383806-36383957)
chr1 (327-469)||(40935718-40935859)
chr1 (327-469)||(40960579-40960720)
chr1 (327-444)||(9127957-9128073)
chr1 (327-443)||(15285718-15285833)
chr1 (327-443)||(18852137-18852252)
chr1 (329-424)||(45358026-45358120)
chr1 (335-469)||(28916620-28916753)
chr1 (327-489)||(52841527-52841691)
chr1 (327-413)||(6787168-6787254)
chr1 (327-393)||(7468150-7468216)
chr1 (329-403)||(25185497-25185571)
chr1 (327-397)||(28016937-28017007)
chr1 (339-489)||(39151242-39151383)
chr1 (327-443)||(43656168-43656282)
chr1 (327-412)||(6786735-6786820)
chr1 (347-489)||(50176448-50176601)
chr1 (327-397)||(15959833-15959903)
chr1 (327-467)||(26479653-26479792)
chr1 (326-391)||(3076192-3076257)
chr1 (332-392)||(35189119-35189177)
chr1 (342-443)||(37192880-37192980)
chr1 (328-373)||(43667486-43667531)
chr1 (327-412)||(44149011-44149095)
chr1 (327-391)||(6785354-6785418)
chr1 (337-443)||(18913477-18913582)
chr1 (327-469)||(31970414-31970554)
chr1 (327-382)||(298875-298930)
chr1 (326-397)||(33081234-33081304)
chr1 (327-397)||(1820313-1820383)
chr1 (327-397)||(4672797-4672867)
chr1 (326-388)||(42723827-42723887)
chr1 (328-373)||(12449153-12449198)
chr1 (416-489)||(28120837-28120910)
chr1 (328-373)||(32624192-32624237)
chr1 (328-373)||(39555772-39555817)
chr1 (327-391)||(46542879-46542944)
chr1 (347-469)||(47996888-47997009)
[»] scaffold0330 (1 HSPs)
scaffold0330 (288-489)||(3046-3247)
[»] chr5 (44 HSPs)
chr5 (327-486)||(16153430-16153589)
chr5 (329-489)||(8959559-8959719)
chr5 (327-489)||(28906985-28907148)
chr5 (327-489)||(28943380-28943543)
chr5 (329-489)||(1144573-1144738)
chr5 (329-487)||(29307271-29307431)
chr5 (345-489)||(3463897-3464042)
chr5 (327-468)||(8506354-8506495)
chr5 (343-489)||(10154010-10154156)
chr5 (328-489)||(5659602-5659767)
chr5 (326-489)||(12912376-12912538)
chr5 (336-468)||(6391795-6391927)
chr5 (327-443)||(35275353-35275468)
chr5 (327-469)||(8146115-8146256)
chr5 (291-443)||(24439452-24439603)
chr5 (326-469)||(20914774-20914916)
chr5 (389-489)||(5369113-5369213)
chr5 (335-469)||(31690722-31690855)
chr5 (332-469)||(30086650-30086786)
chr5 (327-444)||(35462845-35462961)
chr5 (327-429)||(25962594-25962695)
chr5 (326-397)||(8225360-8225431)
chr5 (290-443)||(13146608-13146760)
chr5 (327-412)||(42273547-42273632)
chr5 (333-443)||(24432528-24432637)
chr5 (327-443)||(32079422-32079538)
chr5 (327-489)||(3103410-3103569)
chr5 (382-489)||(5736322-5736429)
chr5 (291-443)||(8541692-8541842)
chr5 (292-443)||(37066351-37066501)
chr5 (327-429)||(16286225-16286326)
chr5 (328-412)||(25840762-25840846)
chr5 (327-469)||(42364955-42365092)
chr5 (327-382)||(9957624-9957679)
chr5 (327-381)||(12793016-12793070)
chr5 (327-397)||(20643912-20643982)
chr5 (327-397)||(34425228-34425298)
chr5 (328-471)||(8143851-8143993)
chr5 (339-469)||(12638818-12638946)
chr5 (326-382)||(39505440-39505496)
chr5 (327-381)||(12730196-12730250)
chr5 (416-489)||(38280853-38280926)
chr5 (328-373)||(43590148-43590193)
chr5 (327-382)||(17351278-17351334)
[»] chr8 (59 HSPs)
chr8 (327-488)||(17314745-17314906)
chr8 (328-489)||(8673298-8673458)
chr8 (362-489)||(41362390-41362517)
chr8 (342-489)||(25195129-25195277)
chr8 (329-487)||(41791545-41791702)
chr8 (327-489)||(17713138-17713300)
chr8 (328-489)||(26954475-26954636)
chr8 (329-487)||(2628249-2628407)
chr8 (330-460)||(28497625-28497755)
chr8 (383-489)||(17336713-17336819)
chr8 (327-489)||(5217307-5217469)
chr8 (327-489)||(8745500-8745660)
chr8 (329-489)||(4038964-4039125)
chr8 (338-468)||(27819585-27819715)
chr8 (418-489)||(38072169-38072240)
chr8 (329-469)||(25321689-25321828)
chr8 (327-469)||(24612583-24612724)
chr8 (327-469)||(35259974-35260115)
chr8 (327-468)||(14576249-14576387)
chr8 (327-443)||(11043974-11044089)
chr8 (367-489)||(29147320-29147442)
chr8 (327-463)||(36537975-36538110)
chr8 (327-469)||(44052537-44052679)
chr8 (327-469)||(27621047-27621188)
chr8 (327-469)||(27752503-27752644)
chr8 (327-469)||(37597987-37598128)
chr8 (329-384)||(38072114-38072169)
chr8 (328-443)||(34899840-34899956)
chr8 (327-443)||(33851152-33851267)
chr8 (327-469)||(3099869-3100011)
chr8 (335-424)||(12893922-12894010)
chr8 (327-412)||(13144141-13144225)
chr8 (290-443)||(11992607-11992760)
chr8 (405-463)||(14693376-14693434)
chr8 (327-397)||(34890368-34890438)
chr8 (327-469)||(35344283-35344425)
chr8 (327-411)||(4047075-4047158)
chr8 (327-469)||(32678612-32678753)
chr8 (347-469)||(44358594-44358715)
chr8 (354-443)||(37567560-37567648)
chr8 (337-469)||(39187159-39187291)
chr8 (327-397)||(24892734-24892804)
chr8 (329-371)||(41362846-41362888)
chr8 (339-384)||(17336375-17336420)
chr8 (343-412)||(27740539-27740607)
chr8 (327-441)||(44411340-44411454)
chr8 (326-382)||(29920480-29920536)
chr8 (327-441)||(35346435-35346548)
chr8 (327-391)||(35525494-35525558)
chr8 (327-391)||(36190667-36190731)
chr8 (329-392)||(30576026-30576089)
chr8 (383-469)||(31133132-31133219)
chr8 (327-412)||(8107798-8107883)
chr8 (326-372)||(31133783-31133829)
chr8 (329-391)||(41809003-41809065)
chr8 (328-373)||(7022590-7022635)
chr8 (328-373)||(7858456-7858501)
chr8 (327-391)||(13143660-13143724)
chr8 (331-383)||(33563718-33563770)
[»] chr7 (49 HSPs)
chr7 (328-489)||(35888050-35888210)
chr7 (342-489)||(31769043-31769189)
chr7 (329-489)||(39170454-39170613)
chr7 (327-487)||(38260232-38260393)
chr7 (329-468)||(22369145-22369284)
chr7 (331-469)||(47383323-47383460)
chr7 (327-468)||(33092741-33092882)
chr7 (327-469)||(44600359-44600500)
chr7 (377-487)||(3777945-3778055)
chr7 (337-469)||(40583068-40583199)
chr7 (290-469)||(35181068-35181246)
chr7 (327-469)||(43107965-43108107)
chr7 (329-385)||(24151764-24151820)
chr7 (327-469)||(41889084-41889225)
chr7 (327-469)||(45598817-45598958)
chr7 (327-443)||(34808132-34808247)
chr7 (327-443)||(36576331-36576446)
chr7 (347-469)||(22111390-22111511)
chr7 (327-469)||(41815753-41815894)
chr7 (326-443)||(3157348-3157464)
chr7 (333-469)||(21654181-21654316)
chr7 (329-469)||(40560297-40560436)
chr7 (327-443)||(42617584-42617699)
chr7 (326-469)||(19933115-19933257)
chr7 (326-469)||(19964254-19964396)
chr7 (335-469)||(23106373-23106507)
chr7 (333-443)||(39348708-39348817)
chr7 (326-397)||(25944473-25944544)
chr7 (337-469)||(23731483-23731614)
chr7 (328-397)||(4910825-4910894)
chr7 (327-408)||(25651422-25651503)
chr7 (329-443)||(32491193-32491305)
chr7 (347-469)||(48879321-48879442)
chr7 (370-489)||(29713149-29713268)
chr7 (382-471)||(30082319-30082409)
chr7 (327-372)||(9818394-9818439)
chr7 (327-372)||(10720319-10720364)
chr7 (327-372)||(18206464-18206509)
chr7 (331-372)||(39337444-39337485)
chr7 (381-471)||(35084159-35084250)
chr7 (327-395)||(7989425-7989491)
chr7 (328-373)||(18102459-18102504)
chr7 (327-360)||(22624024-22624057)
chr7 (327-372)||(30082277-30082322)
chr7 (394-443)||(33153018-33153067)
chr7 (327-372)||(41890416-41890461)
chr7 (327-412)||(47778670-47778754)
chr7 (417-489)||(19912850-19912922)
chr7 (328-372)||(47557933-47557977)
[»] scaffold0565 (1 HSPs)
scaffold0565 (291-489)||(5957-6152)
[»] scaffold0132 (2 HSPs)
scaffold0132 (326-397)||(909-980)
scaffold0132 (326-397)||(8869-8940)
[»] scaffold0495 (1 HSPs)
scaffold0495 (327-441)||(4545-4657)
[»] scaffold0182 (1 HSPs)
scaffold0182 (337-397)||(22721-22781)
[»] scaffold1157 (1 HSPs)
scaffold1157 (327-385)||(2045-2102)
[»] scaffold0009 (1 HSPs)
scaffold0009 (329-391)||(157694-157756)
[»] scaffold0045 (1 HSPs)
scaffold0045 (328-373)||(77887-77932)


Alignment Details
Target: chr3 (Bit Score: 331; Significance: 0; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 115 - 489
Target Start/End: Original strand, 10251714 - 10252088
Alignment:
Q  115 tcacaagaacggtacaacttgagggtccacaaagtttgagatatgtaagacatgtttctttcaggaattctccaaaaataaaatcatatagaatcttcta 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10251714 tcacaagaacggtacaacttgagggtccacaaagtttgagatatgtaagacatgtttctttcaggaattctccaaaaataaaatcatatagaatcttcta 10251813  T
Q  215 atacaataaaagaaaatatattagtaattcaggtgggtcgataaatcaactattacgaagaaaccaattaaaaaatatactctctccgtcctaaattata 314  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10251814 atacaataaaagagaatatattagtaattcaggtgggtcgataaatcaactattacgaagaaaccaattaaaaaatatactccctccgtcctaaattata 10251913  T
Q  315 agcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaag 414  Q
    |          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10251914 actaaaaaaaattcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaag 10252013  T
Q  415 gaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10252014 gaaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgt 10252088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 115 - 489
Target Start/End: Original strand, 10114615 - 10114988
Alignment:
Q  115 tcacaagaacggtacaacttgagggtccacaaagtttgagatatgtaagacatgtttctttcaggaattctccaaaaataaaatcatatagaatcttcta 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10114615 tcacaagaacggtacaacttgagggtccacaaagtttgagatatgtaagacatgtttctttcaggaattctccaaaaataaaatcatatagaatcttcta 10114714  T
Q  215 atacaataaaagaaaatatattagtaattcaggtgggtcgataaatcaactattacgaagaaaccaattaaaaaatatactctctccgtcctaaattata 314  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10114715 agacaataaaagagaatatattagtaattcaggtgggtcgataaatcaactattacgaagaaaccaattaaaaaatgtactccctccgtcctaaattata 10114814  T
Q  315 agcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaag 414  Q
    |||        |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10114815 agcaaaaaaaattcattttctttgtctcaaattataagcaaaaaata-caacttttatcatatttaattatgttttttcaacagattatcttttccaaag 10114913  T
Q  415 gaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10114914 gaaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgt 10114988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 326 - 485
Target Start/End: Complemental strand, 22479258 - 22479099
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  22479258 ttcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaat 22479159  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaa 485  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  22479158 gcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaa 22479099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 327 - 489
Target Start/End: Complemental strand, 22456211 - 22456049
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  22456211 tcattttctttatcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatg 22456112  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  22456111 caaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaattgt 22456049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 328 - 489
Target Start/End: Complemental strand, 2994620 - 2994459
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||| ||||||||||| |||||  || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  2994620 cattttctttgtcccaaattataagaaaaaatgacaaacttttatcgtatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatgc 2994521  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  2994520 aaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgt 2994459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 354 - 489
Target Start/End: Original strand, 10014212 - 10014346
Alignment:
Q  354 aaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttt 453  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014212 aaaagataccaa-ttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttt 10014310  T
Q  454 tcattttctctataatcaactaccaatgaaaattgt 489  Q
    | ||||||||||||||||||||||||||||||||||    
T  10014311 ttattttctctataatcaactaccaatgaaaattgt 10014346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 21214156 - 21214318
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||| |    
T  21214156 tcattttctttgtcccaaattataagcaaaaaagatcaacttttatcacatttaattatgttttttcaaaatattatcttttccaaatgaaaattaaatg 21214255  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||||| |||| ||||| |||||||| |||||||||||||||||||||||||    
T  21214256 caaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgt 21214318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 329 - 489
Target Start/End: Complemental strand, 47444177 - 47444014
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaatta---tgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||     
T  47444177 attttctttgtcccaaattataagcaaaaaatatcaacttttatcatatttaattactatgttttttcaaaaaattatcttttccaaaggaaaattaaat 47444078  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||||||||    
T  47444077 gcaaagtgcattcaatttgctatctttttcattttctctataatcaactaccagtgaaaattgt 47444014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 327 - 487
Target Start/End: Original strand, 38401295 - 38401455
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||| |    
T  38401295 tcattttctttgtcccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaaaaataatcttttccaaaagaaaattaaatg 38401394  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    |||||| |||| ||||| |||| |||||||||||||||||||| |||||||||||||||||    
T  38401395 caaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaatt 38401455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 49583880 - 49584042
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |    
T  49583880 tcattttttctgtcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaagaaaaattaaatg 49583979  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
     |||||||||||||||| |||| ||||||||||||||| |||||| ||| |||||||| ||||    
T  49583980 taaagtgcattcaatttgctctgtttttcattttctctgtaatcatctatcaatgaaagttgt 49584042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 343 - 487
Target Start/End: Original strand, 48291752 - 48291897
Alignment:
Q  343 aaattataagc-aaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaat 441  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  48291752 aaattataagccaaaaaagatcaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatggaaagtgcattcaat 48291851  T
Q  442 ttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    || |||| ||||||||||| ||| ||||||||||||||||||||||    
T  48291852 ttgctctctttttcattttttctgtaatcaactaccaatgaaaatt 48291897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 331 - 489
Target Start/End: Original strand, 34194807 - 34194965
Alignment:
Q  331 tttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaa 430  Q
    |||||||||| || ||||||||||||||| ||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| |||||    
T  34194807 tttctttgtcccagattataagcaaaaaagaccaacttttatcatttttaattatgttgtttcaaaaaattatcttttccaaaggaaaattaaatgcaaa 34194906  T
Q  431 gtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||| ||| |||| | |||||||||||| |||| |||  |||||||||||||||    
T  34194907 gtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgt 34194965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 328 - 489
Target Start/End: Complemental strand, 30454927 - 30454766
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaata-ccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||| |    
T  30454927 cattttctttgtcccaaattataagcaaaaaaaaaccaacttttagcatatttaattatgttgtttcaaaaaattatcttttccaaaggaaaattaaatg 30454828  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||||| |||| | |||||||||||| |||| |||  |||||| ||||||||    
T  30454827 caaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgt 30454766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 10114472 - 10114577
Alignment:
Q  9 acatcatcaatgaatcttaggcctaatacgaaaaggtatatatccttattgtgaacgcttcgagacgatgacaaaccctttttgcaaaaggttgaagatt 108  Q
    |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10114472 acatcatcaatgaatcttaggcctaatacgaaaaggtat----ccttattgtgaacgcttcgagacgatgacaaaccctttttgcaaaaggttgaagatt 10114567  T
Q  109 agtacatcac 118  Q
    ||||||||||    
T  10114568 agtacatcac 10114577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 10251571 - 10251676
Alignment:
Q  9 acatcatcaatgaatcttaggcctaatacgaaaaggtatatatccttattgtgaacgcttcgagacgatgacaaaccctttttgcaaaaggttgaagatt 108  Q
    |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10251571 acatcatcaatgaatcttaggcctaatacgaaaaggtat----ccttattgtgaacgcttcgagacgatgacaaaccctttttgcaaaaggttgaagatt 10251666  T
Q  109 agtacatcac 118  Q
    ||||||||||    
T  10251667 agtacatcac 10251676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 327 - 468
Target Start/End: Complemental strand, 54725806 - 54725665
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| |||||||||||||||||| | | ||||||||||||||||||||| ||||||||||| |||||||||| |||| ||||||||||      
T  54725806 tcattttctttgtcccaaattataagcaaaaaagatctacttttatcatatttaattatattttttcaaaaaattatctttttcaaaagaaaattaaata 54725707  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataa 468  Q
    ||||||||||||||||| |||| ||||| |||||||| ||||    
T  54725706 caaagtgcattcaatttgctctcttttttattttctcaataa 54725665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 342 - 489
Target Start/End: Complemental strand, 7886806 - 7886658
Alignment:
Q  342 caaattataagcaaaaaa-taccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaa 440  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| || ||||||||||||| ||||| ||| |||||||||||||||    
T  7886806 caaattataagcaaaaaaataccaacttttatcatatttaattatgttgttttaaaaaatcatcttttccaaagaaaaatcaaatgcaaagtgcattcaa 7886707  T
Q  441 tttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||| |||| | |||||||||||| ||||  ||  |||||||||||||||    
T  7886706 tttgctctctctttcattttctcaataactaataaccaatgaaaattgt 7886658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 330 - 489
Target Start/End: Complemental strand, 25242379 - 25242219
Alignment:
Q  330 ttttctttgtctcaaattataagcaaaaaataccaa-cttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    ||||||||||  ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||| || || ||||  | |||||||||||| |||    
T  25242379 ttttctttgttccaaattataagcaaaaaaggtcaaacttttatcatatttaattatgttttttcaaaatatcatatttttaataggaaaattaaacgca 25242280  T
Q  429 aagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||  ||| ||||| |||||||||||||||||||| ||  |||||||||    
T  25242279 aagtgcattcaatttgttctcttttttattttctctataatcaactatcaccgaaaattgt 25242219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 366 - 487
Target Start/End: Complemental strand, 8097182 - 8097061
Alignment:
Q  366 cttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctcta 465  Q
    ||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||| |||| | |||||||||||| |    
T  8097182 cttttatcatatttaataatgttgtttcaaaaaattattttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaa 8097083  T
Q  466 taatcaactaccaatgaaaatt 487  Q
    ||| |||  |||||||||||||    
T  8097082 taagcaataaccaatgaaaatt 8097061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 23209483 - 23209371
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||| ||||||  |||||||| |    
T  23209483 tcattttctttgtcttaaattataagcaaaaaagaccaacttttatcatatttaattatgttatttcaaaaaatcatctttcccaaagagaaattaaatg 23209384  T
Q  427 caaagtgcattca 439  Q
    |||| ||||||||    
T  23209383 caaattgcattca 23209371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 375 - 480
Target Start/End: Complemental strand, 29676602 - 29676496
Alignment:
Q  375 tatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctc-tataatcaac 473  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||| | || | |||||||||||||| ||||||||||    
T  29676602 tatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaattcaaagtgcattcaatatgctttctttttcattttctcttataatcaac 29676503  T
Q  474 taccaat 480  Q
    |||||||    
T  29676502 taccaat 29676496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 327 - 468
Target Start/End: Original strand, 32070162 - 32070302
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaa-ataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||| || ||||||||||||||||| |||  |||||||||||||||||| |||||  |||||||| ||||| ||||| |||| |||||||||     
T  32070162 tcattttctttctcccaaattataagcaaaaagata--aacttttatcatatttaactatgtagtttcaaaaaattattttttcaaaagaaaaattaaat 32070259  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataa 468  Q
    |||||||| |||||||||||||| ||| |||||||||| ||||    
T  32070260 gcaaagtgtattcaatttactctctttctcattttctcaataa 32070302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 327 - 484
Target Start/End: Complemental strand, 7615122 - 7614967
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||||||  |||||||||| ||||||   ||| |||| ||||||||||||||||| |||||||| || ||||||| |||||||||| |||| |    
T  7615122 tcattttctttgtcctaaattataaggaaaaaaa--caatttttgtcatatttaattatgttatttcaaaaaatcatctttttcaaaggaaaactaaatg 7615025  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaa 484  Q
    |||  |||||||||||||| || | ||| |||||||||| ||||||| ||||||||||    
T  7615024 caacttgcattcaatttaccctctcttttattttctctacaatcaacaaccaatgaaa 7614967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 487
Target Start/End: Original strand, 6784257 - 6784399
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgc 434  Q
    |||||| ||||||||||| |||||| || |||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||| |||          
T  6784257 tttgtcccaaattataag-aaaaaagactaacttttatcatatttaattat-ttttttcaaaaaattatctcttccaaagaaaaattaaatgca------ 6784348  T
Q  435 attcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
      |||||||  ||| ||||||||||  ||||||||||||||| ||||||||||    
T  6784349 --tcaatttgatctctttttcatttattctataatcaactacgaatgaaaatt 6784399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 292 - 469
Target Start/End: Complemental strand, 26641352 - 26641176
Alignment:
Q  292 tactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||||||||| |||||||         |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||    
T  26641352 tactctctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaacaccaacttttatgctatt--attatgttttt 26641255  T
Q  392 tcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| | || ||||||| ||| | ||||||||| ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  26641254 tcaaacaaatcatctttttcaaggtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 26641176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 23513482 - 23513623
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||  ||||  |||||||||||||||| | |  ||||||| ||| | |||||||||     
T  23513482 tcatattctttgtctcaaaatataagcaaaaaataccaacttttatgctatt--attatgttttttcaaacaaaacatctttttcaatgtaaaattaaat 23513579  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  23513580 gcaaattgcattcaatttgttctcctttttattttctccataat 23513623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 291 - 443
Target Start/End: Original strand, 55400617 - 55400768
Alignment:
Q  291 atactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttt 390  Q
    |||||| |||||||||||| |||||||        ||||| |||||||||||||| ||||||||||||| ||  ||||||||  ||||  ||||||||||    
T  55400617 atactccctccgtcctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagcaaaaaagacttacttttatgctatt--attatgtttt 55400714  T
Q  391 ttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    |||||| | || ||||||||||| | ||||||||| ||||| ||||||||||||    
T  55400715 ttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 55400768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 21654159 - 21654301
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatg-ttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||| |||||||||| | || ||||||||||| | |||||||||    
T  21654159 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgtttttttcaaacaaatcatcttttccaatgtaaaattaaa 21654256  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  21654257 tgcaaattgcattcaatttgttctcctttttattttctccataat 21654301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 1335025 - 1335166
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||| ||||||  ||||  |||||||||||||||| | || ||||||| ||| | |||||||||     
T  1335025 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgttatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 1335122  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  1335123 gcaaattgcattcaatttgttcttctttttattttctccataat 1335166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 443
Target Start/End: Complemental strand, 36189249 - 36189096
Alignment:
Q  289 atatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtt 388  Q
    |||||||| ||||||||||||||||||||          ||||||||||||| |||| ||||||||||||| |||| |||||||  ||||  ||||||||    
T  36189249 atatactccctccgtcctaaattataagcaaaaaaatcacattttctttgtc-caaaatataagcaaaaaagaccatcttttatgttatt--attatgtt 36189153  T
Q  389 ttttca--aaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    ||||||  ||| ||  |||||||||||| ||||||||| ||||| ||||||||||||    
T  36189152 ttttcacaaaaaatcttcttttccaaagtaaaattaaatgcaaattgcattcaattt 36189096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 391 - 489
Target Start/End: Complemental strand, 46918352 - 46918254
Alignment:
Q  391 ttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||| ||||||||||||||| |||||||||  ||||||||||||| |||| | || | |||||||||||| |||| |||  |||||||||||||||    
T  46918352 ttcaaaaaattatcttttccaaatgaaaattaagtgcaaagtgcattccatttgcactctctttcattttctcaataaccaataaccaatgaaaattgt 46918254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 31126127 - 31126268
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||| ||||||| ||||||||||||   |||  |||||||||||||||| | || || |||||||| | |||||||||     
T  31126127 tcatattctttgtctcaaaatataaacaaaaaagaccaacttttatgccatt--attatgttttttcaaacaaatcattttttccaatgtaaaattaaat 31126224  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  31126225 gcaaattgcattcaatttgttctcctttttattttctccataat 31126268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 332 - 441
Target Start/End: Original strand, 13541197 - 13541305
Alignment:
Q  332 ttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttc-aaaagattatcttttccaaaggaaaattaaaagcaaa 430  Q
    |||||||||||||| |||||| |||||| ||||||||||||  ||||  ||||||||||||| || | || ||||||||||| | ||||||||| |||||    
T  13541197 ttctttgtctcaaaatataagaaaaaaagaccaacttttatgttatt--attatgttttttcgaacaaatcatcttttccaatgtaaaattaaatgcaaa 13541294  T
Q  431 gtgcattcaat 441  Q
     ||||||||||    
T  13541295 ttgcattcaat 13541305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 424
Target Start/End: Original strand, 45781312 - 45781408
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||  |||||  ||||||||||||||| | || ||||||||||| | |||||||||    
T  45781312 tcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 45781408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 489
Target Start/End: Complemental strand, 16033165 - 16033028
Alignment:
Q  352 gcaaaaaataccaacttttatcatatttaattatgtt-ttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctat 450  Q
    ||||||||||  |||||||||||||||||||||| || |||||| || ||  |||||||||||||||  || || |||||||||||||||||| || | |    
T  16033165 gcaaaaaatataaacttttatcatatttaattatattgttttcataa-atgttcttttccaaaggaattttcaatgcaaagtgcattcaatttgctttct 16033067  T
Q  451 ttttcattttctctataatcaactaccaatgaaaattgt 489  Q
     ||||||||| || ||||  ||  |||||||||||||||    
T  16033066 ctttcattttttcaataactaataaccaatgaaaattgt 16033028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 33974781 - 33974711
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||||||||||| ||||||||||||| || ||||||| |||||||||||  |||||||| ||||    
T  33974781 tcattttctttgtctcaaaatataagcaaaaaagacaaacttttttcatatttaatcttgttttttgaaaa 33974711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 2927190 - 2927275
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    ||||||||||||||| ||| ||||||||||||| || ||||||||| |||||||||  |||||||  |||| || |||||||||||    
T  2927190 tcattttctttgtcttaaaatataagcaaaaaagacaaacttttattatatttaatcttgtttttaaaaaaaatcatcttttccaa 2927275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 424
Target Start/End: Complemental strand, 16739358 - 16739264
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||  ||||  ||||| |||||||||| | || ||||||||||| | |||||||||    
T  16739358 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatattttttcaaacaaatcatcttttccaatgtaaaattaaa 16739264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 472
Target Start/End: Original strand, 17587665 - 17587774
Alignment:
Q  363 caacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttct 462  Q
    |||||||||| ||||||||||||||| ||| |||| || |||||||  |||| ||||||||  | |||||||||| |||||  ||| | |||||||||||    
T  17587665 caacttttattatatttaattatgttgttttaaaaaatcatcttttttaaagaaaaattaagtgtaaagtgcatttaatttgttctctctttcattttct 17587764  T
Q  463 ctataatcaa 472  Q
    | ||||||||    
T  17587765 caataatcaa 17587774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 469
Target Start/End: Original strand, 46580450 - 46580592
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    ||||| |||||||||||||| |||||| |||||| ||||||||||||   |||  |||||||||||||||| | || || |||| ||| | |||||||||    
T  46580450 ttcatattctttgtctcaaaatataagtaaaaaagaccaacttttatgccatt--attatgttttttcaaacaaatcatattttacaatgtaaaattaaa 46580547  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  46580548 tgcaaattgcattcaatttgttctcctttttattttctccataat 46580592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 469
Target Start/End: Original strand, 53020105 - 53020239
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatg-ttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagt 432  Q
    ||||||||||| |||||| |||||||||||||||||||  ||||  |||||| |||||||||| | || ||||||| ||| | ||||||||| ||||| |    
T  53020105 tttgtctcaaaatataagtaaaaaataccaacttttatgctatt--attatgtttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaatt 53020202  T
Q  433 gcattcaatttactctatttttcattttctctataat 469  Q
    |||||||||||  |||  |||| |||||||| |||||    
T  53020203 gcattcaatttgttctcctttttattttctccataat 53020239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 439
Target Start/End: Complemental strand, 27876153 - 27876005
Alignment:
Q  292 tactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataa-gcaaaaaataccaacttttatcatatttaattatgtttt 390  Q
    ||||| |||||||||||||||||||         |||||||||||| ||  ||||||||| ||| |||| || |||||||||||||||||||||| || |    
T  27876153 tactcactccgtcctaaattataagtaaaaaaaattcattttctttatcctaaattataaagcagaaaagactaacttttatcatatttaattatattat 27876054  T
Q  391 ttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattca 439  Q
    ||||||| ||  |||||| |||||  |||||||| ||||  ||||||||    
T  27876053 ttcaaaaaatcttctttttcaaagagaaattaaatgcaatttgcattca 27876005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 14752430 - 14752360
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||  |||||||| ||||    
T  14752430 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaa 14752360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 414
Target Start/End: Original strand, 41935538 - 41935623
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaag 414  Q
    |||||| |||||| |||||||||||||||||   ||||||||||||||||||||||||||| ||| |||| || || |||| |||||    
T  41935538 cattttttttgtcccaaattataagcaaaaagg-ccaacttttatcatatttaattatgttattttaaaaaatcatatttttcaaag 41935623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 468
Target Start/End: Complemental strand, 12128856 - 12128732
Alignment:
Q  343 aaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatt 442  Q
    ||||||||||||||||| || |||||||| |||||||||||||||| |||||||| || || ||||| | ||  ||||||||  |||| | |||| | ||    
T  12128856 aaattataagcaaaaaagactaactttta-catatttaattatgttatttcaaaaaatcattttttctatagagaaattaaatacaaattacatttattt 12128758  T
Q  443 tactctatttttcattttctctataa 468  Q
    | ||||   |||||||||||||||||    
T  12128757 tgctctccctttcattttctctataa 12128732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 28793078 - 28793143
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa 396  Q
    ||||| ||||||||||| ||||||||||||| ||||||||||||  |||||  |||||||||||||||    
T  28793078 attttatttgtctcaaaatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaa 28793143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 32322444 - 32322303
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| |||||| |||||| || |  ||||||  |||||  ||||||||||||||| | |||||||||| ||| | |||||||||     
T  32322444 tcattttctttgtctcaaaatataagtaaaaaagactagattttatgctattt--ttatgttttttcaaacaaattatctttttcaatgtaaaattaaat 32322347  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     |||  |||||| |||||| |||  |||| |||||||| |||||    
T  32322346 acaagttgcatttaatttattctcctttttattttctccataat 32322303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 469
Target Start/End: Original strand, 43575876 - 43576013
Alignment:
Q  330 ttttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaa 429  Q
    |||| ||||||||||| ||||||||||||| | ||||||||||  |||||  ||||||||||  || | || |||||||| || | ||||||||| ||||    
T  43575876 ttttttttgtctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgtttttcaaacaaatcatcttttctaatgtaaaattaaatgcaa 43575973  T
Q  430 agtgcattcaatttactctatttttcattttctctataat 469  Q
      |||||| |||||| |||  |||| |||||||| |||||    
T  43575974 gttgcatttaatttattctcctttttattttctccataat 43576013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 46711882 - 46711826
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaat 382  Q
    |||||||||||||||||||| |||||||| |||| || |||||||||| ||||||||    
T  46711882 ttcattttctttgtctcaaaatataagcataaaaaacaaacttttatcctatttaat 46711826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 34022536 - 34022620
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaa 412  Q
    ||||||||||||||||||| ||||||||||||| ||||  ||||||  |||||  ||||||||||||||| | || |||||||||||    
T  34022536 tcattttctttgtctcaaaatataagcaaaaaaaaccattttttatgctattt--ttatgttttttcaaacaaatcatcttttccaa 34022620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 443
Target Start/End: Complemental strand, 37324288 - 37324174
Alignment:
Q  332 ttctttgtctcaaattataagcaaaaaataccaactttta--tcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagca 428  Q
    |||||||||| ||| ||||||||||||| |||||||||||  ||||  |||  | | |||||||||| | || ||||||||||| | ||||||||| |||    
T  37324288 ttctttgtcttaaaatataagcaaaaaagaccaacttttatgtcattattatgttttttttttcaaacaaatcatcttttccaatgtaaaattaaatgca 37324189  T
Q  429 aagtgcattcaattt 443  Q
    || ||||||||||||    
T  37324188 aattgcattcaattt 37324174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 46819964 - 46820079
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| |||||  |||||| | ||||||||||  |||||  ||||||||||| ||| | || ||||||||||| | |||||||||     
T  46819964 tcattttctttgtctcaaaatataaataaaaaagatcaacttttatgctattt--ttatgtttttttaaacaaatcatcttttccaatgtaaaattaaat 46820061  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||  |||||| |||||    
T  46820062 gcaagttgcatttaattt 46820079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 20847382 - 20847309
Alignment:
Q  416 aaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||| ||||| | ||||||||||   || | |||||||||||| |||||||| ||||||||||||||||    
T  20847382 aaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgt 20847309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 37074859 - 37074924
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    ||||||||||||||| | || ||||||||||||| || |||||||||| ||||||||  |||||||    
T  37074859 ttcattttctttgtcccgaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttt 37074924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 45347873 - 45347828
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||    
T  45347873 tcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 45347828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 50651259 - 50651174
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    |||||||||||||  |||  ||||||||||||| |  |||||||||| ||||||||  |||||||| |||| || |||||||||||    
T  50651259 tcattttctttgttccaatatataagcaaaaaagataaacttttatcctatttaatcttgtttttttaaaaaatcatcttttccaa 50651174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 28875308 - 28875372
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||| ||||| |||| |||||||||||||||  |||||||||| ||||||||  |||||||    
T  28875308 tcattttcattgtcccaaaatataagcaaaaaatataaacttttatcttatttaatcttgttttt 28875372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 469
Target Start/End: Original strand, 51255105 - 51255242
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||||||| |||||| |||||| | ||||||||||     ||| ||||||||||||||| | || |||||||||||   ||||||||| ||    
T  51255105 attttctttgtctcaaaatataagtaaaaaagatcaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatctaaaattaaatgc 51255200  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||  |||||| |||||  |||  |||| |||||||| |||||    
T  51255201 aagttgcatttaatttgttctcctttttattttctccataat 51255242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 7866705 - 7866650
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaat 382  Q
    |||||||||||||| |||| ||||| ||||||| || |||||||||| ||||||||    
T  7866705 tcattttctttgtcccaaaatataaacaaaaaagacaaacttttatcctatttaat 7866650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 51426532 - 51426675
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||| ||| ||||||||||||| ||||||||||||  ||||    | | |||||||||| | || |||||||| || | |||||||||     
T  51426532 tcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattcttatgttttttttcaaacaaatcatcttttctaatgtaaaattaaat 51426631  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| | ||||||||||  |||  |||| |||||||| |||||    
T  51426632 gcaaattacattcaatttgttcttctttttattttctccataat 51426675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 6074984 - 6075049
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt 392  Q
    |||||||| ||||| |||| ||||||||||||| || ||| |||||| ||||||||  ||||||||    
T  6074984 tcattttcattgtcccaaaatataagcaaaaaagacaaacatttatcctatttaatcttgtttttt 6075049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 11054498 - 11054453
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  11054498 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 11054453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 31836862 - 31836919
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt 392  Q
    |||||| |||| | |||||||||||||| |||||||||| ||||||||  ||||||||    
T  31836862 tttgtcccaaaatgtaagcaaaaaatacaaacttttatcctatttaatcttgtttttt 31836919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 489
Target Start/End: Original strand, 35963162 - 35963235
Alignment:
Q  416 aaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||| ||||| |||||| ||||| |||| | |||||||||||| |||| |||  |||||| ||||||||    
T  35963162 aaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgt 35963235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 37042531 - 37042458
Alignment:
Q  416 aaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || ||||||||   ||||||||||||||    
T  37042531 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgt 37042458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 423
Target Start/End: Complemental strand, 44566987 - 44566895
Alignment:
Q  330 ttttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaa 423  Q
    |||| ||||||  ||||||||| |||| || |  ||||||||||||||||||||||| || ||||||| || |||||||| ||||  |||||||    
T  44566987 ttttttttgtcctaaattataaacaaagaagaaaaacttttatcatatttaattatg-ttgttcaaaaaatcatcttttctaaagagaaattaa 44566895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 49067028 - 49067073
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    |||| |||||||||||||| ||||||||||||| | ||||||||||    
T  49067028 tcatattctttgtctcaaaatataagcaaaaaagatcaacttttat 49067073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 6437981 - 6438037
Alignment:
Q  327 tcattttctttgtctcaaattataagc-aaaaaataccaacttttatcatatttaat 382  Q
    |||||||||||||| |||| ||||||| |||||| || |||||||||| ||||||||    
T  6437981 tcattttctttgtcccaaaatataagcaaaaaaaaacaaacttttatcctatttaat 6438037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 469
Target Start/End: Complemental strand, 46296262 - 46296141
Alignment:
Q  347 tataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttac 445  Q
    ||||||||||||| | ||||||||||  |||||  ||||||||||||||| | || ||||||||| | | ||||||||| ||||  |||||| |||||      
T  46296262 tataagcaaaaaagatcaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccgatgtaaaattaaatgcaagttgcatttaatttgt 46296165  T
Q  446 tctatttttcattttctctataat 469  Q
    |||  |||| |||||||| |||||    
T  46296164 tctcctttttattttctccataat 46296141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 49068473 - 49068505
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaa 359  Q
    ||||||| |||||||||||||||||||||||||    
T  49068473 tcattttttttgtctcaaattataagcaaaaaa 49068505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 9e-96; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 115 - 381
Target Start/End: Complemental strand, 16013848 - 16013580
Alignment:
Q  115 tcacaagaacggtacaacttgagggtccacaaagtttgagatatgtaagacatgtttctttcaggaattctccaaaaataaaatcatatagaatcttcta 214  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16013848 tcacaggaacagtacaacttgagggtccacaaagtttgagatatgtaagacatgtttctttcaggaattctccaaaaataaaatcatatagaatcttcta 16013749  T
Q  215 atacaataaaagaaaatatattagtaattcaggtgggtcgataaatcaactattacgaagaaaccaattaaaaaatatactctctccgtcctaaattata 314  Q
    | ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  16013748 agacaataaaagagaatatattagtaattcaagtgggtcgataaatcaactattacgaagaaaccgattaaaaaatgtactccctccgtcctaaattata 16013649  T
Q  315 ag--cnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaa 381  Q
    ||            ||||||||||||||||||||||| || |||| | |||||||||||||||||||||    
T  16013648 aggaaaattaaaactcattttctttgtctcaaattatgagtaaaatagaccaacttttatcatatttaa 16013580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 4031902 - 4032064
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||| ||||||||||| || ||||||||||| |    
T  4031902 tcattttctttatctcaaattataagcataaaagaccaactttaatcatatttaattatgttttttcgaaaaattatcttttcaaagggaaaattaaatg 4032001  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  4032002 caaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgt 4032064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 3888342 - 3888504
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||| |   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |    
T  3888342 tcattttctttattctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatctttttcaaaggaaaattaaatg 3888441  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||    
T  3888442 caaagtgcattcaatttgttctctttttcattttctctataatcaactacccatgaaaattgt 3888504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 329 - 487
Target Start/End: Original strand, 4987860 - 4988018
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    |||||||||||| ||||||||||  |||||| || ||||||||||||||| || |||||||||| |||| |||||||||| ||||||||||||||| |||    
T  4987860 attttctttgtcccaaattataaataaaaaagactaacttttatcatattcaaatatgtttttttaaaaaattatctttttcaaaggaaaattaaatgca 4987959  T
Q  429 aagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    || |||||||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  4987960 aaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaatt 4988018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 292 - 468
Target Start/End: Complemental strand, 5300871 - 5300696
Alignment:
Q  292 tactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||||  |||||||||||        ||||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||||||    
T  5300871 tactctctccgtctcaaattataagcaaaaaaaattcattttctttgtcccaaattataagcaaaaag-atcaacttttatcatatttaattatgttttt 5300773  T
Q  392 tcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataa 468  Q
    |||||| ||||||||||||||| ||||||||||  ||||||||||||||||| |||| ||||| |||||||| ||||    
T  5300772 tcaaaaaattatcttttccaaaagaaaattaaatacaaagtgcattcaatttgctcttttttttattttctcaataa 5300696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 16013991 - 16013886
Alignment:
Q  9 acatcatcaatgaatcttaggcctaatacgaaaaggtatatatccttattgtgaacgcttcgagacgatgacaaaccctttttgcaaaaggttgaagatt 108  Q
    |||||||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  16013991 acatcatcaatgaatcttaggcctaatacgaaaaggtat----ccttattgtgaacgctccgagacgatgacaaacccttttagcaaaaggttgaagatt 16013896  T
Q  109 agtacatcac 118  Q
    ||||||||||    
T  16013895 agtacatcac 16013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 375 - 489
Target Start/End: Original strand, 16524343 - 16524456
Alignment:
Q  375 tatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaact 474  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||  |||  ||||||||||||||||||||||||    
T  16524343 tatttaattatgttttttcaaaaaattattttttccaaaagaaaattaaatgcaaagtgcattcaatttgttct-cttttcattttctctataatcaact 16524441  T
Q  475 accaatgaaaattgt 489  Q
    |||||||||||||||    
T  16524442 accaatgaaaattgt 16524456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 354 - 487
Target Start/End: Original strand, 15830637 - 15830770
Alignment:
Q  354 aaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttt 453  Q
    |||||| || || |||||||||||||||||| |||||||||||| ||||| ||||||||||||| |||||| | |||||||||||||||| | || ||||    
T  15830637 aaaaaagacaaatttttatcatatttaattacgttttttcaaaaaattattttttccaaaggaatattaaatgtaaagtgcattcaatttgcactctttt 15830736  T
Q  454 tcattttctctataatcaactaccaatgaaaatt 487  Q
    ||||||| |||  ||||||||| |||||||||||    
T  15830737 tcattttatctgcaatcaactatcaatgaaaatt 15830770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 1130434 - 1130520
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaa 413  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  1130434 tcattttctttgtcccaaattataagcaaaaaaaaccaacttttatcatatttaattacgttgtttcaaaaaattatcttttccaaa 1130520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 326 - 469
Target Start/End: Original strand, 17598206 - 17598348
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||||||| |||||| |||| ||||||||||||| |||||||| |||  ||||  |||||||||||||||| | ||  |||||||||| | |||||||||    
T  17598206 ttcattttttttgtcccaaaatataagcaaaaaagaccaacttgtatgttatt--attatgttttttcaaacaaatcttcttttccaatgtaaaattaaa 17598303  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||| ||||||||||||| ||| ||||| |||||||| |||||    
T  17598304 tgcaaattgcattcaatttattctcttttttattttctccataat 17598348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 287 - 469
Target Start/End: Complemental strand, 31887405 - 31887223
Alignment:
Q  287 aaatatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatg 386  Q
    |||||||||| |||||||||||| |||||||         |||||||||||||||||||||||||||| |||| ||||||||||||  |||||  |||||    
T  31887405 aaatatactccctccgtcctaaaatataagcaaaaaaatatcattttctttgtctcaaattataagcataaaagaccaacttttatgctattt--ttatg 31887308  T
Q  387 -ttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     |||||||||| | || ||||||||||| | ||||||||| ||||  |||||| |||||  ||| ||||| |||||||| |||||    
T  31887307 tttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcttttttattttctccataat 31887223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 469
Target Start/End: Complemental strand, 17722047 - 17721911
Alignment:
Q  332 ttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaa 430  Q
    |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || || |||||||| | ||||||||| |||||    
T  17722047 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaagaaatcatattttccaatgtaaaattaaatgcaaa 17721950  T
Q  431 gtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||||||||||  |||  |||| |||||||| |||||    
T  17721949 ttgcattcaatttgttctcctttttattttctccataat 17721911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 469
Target Start/End: Original strand, 30949051 - 30949190
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||||||| ||||||||||||| || |||||||||  |||||  ||||||||||||||| | || ||||||||||| | ||||||||| ||    
T  30949051 attttctttgtctcaaaatataagcaaaaaagactaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 30949148  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||  |||||| |||||  |||  |||| ||||||||||||||    
T  30949149 aagttgcatttaatttgttctcctttttattttctctataat 30949190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 432 - 489
Target Start/End: Complemental strand, 16013571 - 16013514
Alignment:
Q  432 tgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  16013571 tgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgt 16013514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 469
Target Start/End: Original strand, 374018 - 374154
Alignment:
Q  332 ttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaa 430  Q
    |||||| ||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || || |||||| | | ||||||||| |||||    
T  374018 ttctttatctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatattttccgatgtaaaattaaatgcaaa 374115  T
Q  431 gtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||||||||||  |||  |||| ||||||||||||||    
T  374116 ttgcattcaatttgttctcctttttattttctctataat 374154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 429
Target Start/End: Complemental strand, 5822265 - 5822162
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtt-ttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||| |||| |||||||||| ||||||| || || |||||||||||||||||||||| |||| |||| || |||||||||||||  ||||||||     
T  5822265 tcattttctctgtcccaaattataaacaaaaaagactaatttttatcatatttaattatgtttttttaaaaaaatcatcttttccaaagagaaattaaat 5822166  T
Q  426 gcaa 429  Q
    ||||    
T  5822165 gcaa 5822162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 469
Target Start/End: Original strand, 12278586 - 12278761
Alignment:
Q  293 actctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt 392  Q
    |||| |||||||||||| |||||||        ||||| |||||||||||||| ||||||||||||| | ||||||||||  ||||  ||||||||||||    
T  12278586 actccctccgtcctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagcaaaaaagatcaacttttatgttatt--attatgtttttt 12278683  T
Q  393 caaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    |||| | || || ||||| || | ||||||||| ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  12278684 caaacaaatcattttttcaaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 12278761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 441
Target Start/End: Original strand, 10227826 - 10227939
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  ||||||||||| |||| | || |||||||||||   |||||||||     
T  10227826 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgtttttccaaacaaatcatcttttccaatataaaattaaat 10227923  T
Q  426 gcaaagtgcattcaat 441  Q
    ||||| ||||||||||    
T  10227924 gcaaattgcattcaat 10227939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 30766360 - 30766501
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| | ||||||||||  ||||  |||||||||||||||| | ||||| |||| ||| | |||||||||     
T  30766360 tcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgttatt--attatgttttttcaaagaaattatttttttcaatgtaaaattaaat 30766457  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| |||||| |||||  |||  |||| |||||||| |||||    
T  30766458 gcaaattgcattgaatttgttctcctttttattttctccataat 30766501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 33756170 - 33756311
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||| ||||||| |||||| |||||||||||||||||||  ||||  |||||||||||||||| | || || |||| ||| | |||||||||     
T  33756170 tcatattctttatctcaaaatataagaaaaaaataccaacttttatgctatt--attatgttttttcaaacaaatcatttttttcaatgtaaaattaaat 33756267  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||   ||  ||||||||||||| |||||    
T  33756268 gcaaattgcattcaatttgtcctccttttcattttctccataat 33756311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 414
Target Start/End: Complemental strand, 5881996 - 5881909
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaag 414  Q
    ||||||||| |||| |||||||||| ||||||  || || |||||||||||||||||||||||||  |||| || |||||||||||||    
T  5881996 tcattttctctgtcccaaattataaacaaaaatgactaatttttatcatatttaattatgtttttaaaaaaaatcatcttttccaaag 5881909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 408
Target Start/End: Complemental strand, 13854933 - 13854852
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatctttt 408  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||| || ||| |||| | ||||||||    
T  13854933 ttcattttctttatcttaaattataagcaaaaag-accaacttttatcatatttaattatattgtttgaaaaaactatctttt 13854852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 391
Target Start/End: Complemental strand, 7275140 - 7275076
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||||||| |||||||||  |||||||    
T  7275140 tcattttatttgtcttaaaatataagcaaaaaatacaaacttttattatatttaatcttgttttt 7275076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 370
Target Start/End: Complemental strand, 32882960 - 32882882
Alignment:
Q  292 tactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaactttt 370  Q
    ||||| |||||||| |||||||||||        |||||||||||||||  ||| ||||||||||||| ||||||||||    
T  32882960 tactccctccgtcccaaattataagcaaaaaaatttcattttctttgtcctaaaatataagcaaaaaagaccaactttt 32882882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 3095874 - 3095801
Alignment:
Q  416 aaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || ||||||||   ||||||||||||||    
T  3095874 aaaattaaatgcaaattacattcaattttctctttatttcattttttccataatcaatagccaatgaaaattgt 3095801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 3095952 - 3095907
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  3095952 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 3095907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 21542348 - 21542393
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  21542348 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 21542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 35129210 - 35129137
Alignment:
Q  416 aaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||  |||||||||||||||    
T  35129210 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgt 35129137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 413
Target Start/End: Original strand, 2851474 - 2851561
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtt-ttttcaaaagattatcttttccaaa 413  Q
    |||| |||||||||| ||||||||||   ||||| || || ||||||| ||||||||||||||  ||||||||| | ||||||||||||    
T  2851474 ttcactttctttgtcccaaattataaatgaaaaagacaaatttttatcctatttaattatgttggtttcaaaag-tcatcttttccaaa 2851561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 6e-69; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 289 - 489
Target Start/End: Complemental strand, 23978390 - 23978190
Alignment:
Q  289 atatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtt 388  Q
    |||||||| ||||||||||||||||||||         ||||||||||| || |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  23978390 atatactccctccgtcctaaattataagcaaaaaaaactcattttctttatcccaaattataagcgaaaaagaccaacttttatcatatttaattatgtt 23978291  T
Q  389 ttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattg 488  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  23978290 ttttcaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattg 23978191  T
Q  489 t 489  Q
    |    
T  23978190 t 23978190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 327 - 489
Target Start/End: Complemental strand, 28318654 - 28318492
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  28318654 tcattttctttgtcccaaattgtaagcaaaaaaaactaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatg 28318555  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
     ||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  28318554 taaaatgcattcaatttactagctttttcattttctctataatcaactaccaatgaaaattgt 28318492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 37911799 - 37911961
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| ||||||||||| |||||| || || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  37911799 tcattttctttgtcccaaattataagtaaaaaagactaaattttatcatatttaattatgttttttcaaaatattatcttttccaaaggaaaattaaatg 37911898  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||||    
T  37911899 caaagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaattgt 37911961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 327 - 489
Target Start/End: Complemental strand, 28142859 - 28142697
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaatac-caacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    |||||||||||||  |||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  28142859 tcattttctttgttccaaattataagcaaaaaaaaatcaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaat 28142760  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||  ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  28142759 gcaaa-agcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattgt 28142697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 291 - 489
Target Start/End: Complemental strand, 46070794 - 46070597
Alignment:
Q  291 atactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaat-accaacttttatcatatttaattatgttt 389  Q
    ||||||||||||||| |||||||||||          ||||||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||     
T  46070794 atactctctccgtcccaaattataagcaaaaaaaacccattttctttgtcccaaattataagcaaaaaaagaccaatttttatcatatttaattatgttg 46070695  T
Q  390 tttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||  | |||||||||||| |||| |||| |||||||||||||||    
T  46070694 tttgaaaaaattatcttttccaaaggaaaattaaatgcaaagtgcattcaatttactc--tctttcattttctcaataaccaacaaccaatgaaaattgt 46070597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 328 - 489
Target Start/End: Complemental strand, 47516427 - 47516266
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||| |||||||||||||||||| |||||||||||| | ||||||||||||| |||||||| ||||||||||||||||||||||||||  |    
T  47516427 cattttctttgtcccaaattataagcaaaaaagaccaacttttattacatttaattatgttgtttcaaaaaattatcttttccaaaggaaaattaaatac 47516328  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||  |||| |||| | |||||||||||| |||| |||| |||||||||||||||    
T  47516327 aaagtgcatttgatttgctctctctttcattttctcaataaccaacaaccaatgaaaattgt 47516266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 290 - 487
Target Start/End: Original strand, 32410209 - 32410403
Alignment:
Q  290 tatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttt 389  Q
    |||||||||||||||||||||||||||         |||||||| |||||||||||||||| |||||||  | ||||||||||| ||||||||||| |||    
T  32410209 tatactctctccgtcctaaattataag--aaaaaaattcattttttttgtctcaaattatatgcaaaaag-atcaacttttatcgtatttaattatattt 32410305  T
Q  390 tttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    |||||||| ||||  |||||||||||||||||||| |||||||| ||||||||| |||| ||||| |||||||||||||| ||||| |||||||||||    
T  32410306 tttcaaaatattactttttccaaaggaaaattaaatgcaaagtgtattcaatttgctctcttttttattttctctataattaactagcaatgaaaatt 32410403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 326 - 489
Target Start/End: Complemental strand, 8178476 - 8178314
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || |||||||| ||||| ||||| ||| ||||||||||     
T  8178476 ttcattttctttgtctcaaattataag-aaaaaagaccaacttttatcatatttaattatattgtttcaaaaaattatattttctaaaagaaaattaaat 8178378  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||| |||| | |||||||||||| |||| |||  ||||||  |||||||    
T  8178377 gcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgt 8178314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 329 - 489
Target Start/End: Original strand, 49080172 - 49080334
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagatta--tcttttccaaaggaaaattaaaag 426  Q
    ||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||||| |||| | |   | |||| ||||||||||||||| |    
T  49080172 attttctctgtcccaaattataagcaaaaaagatcaacttttatcatatttaattatgtttttttaaaaaaattgttatttttcaaaggaaaattaaatg 49080271  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||  ||| |||||||||||| || ||||||||||||||||||||||||    
T  49080272 caaagtgcattcaatttgatctctttttcattttccctgtaatcaactaccaatgaaaattgt 49080334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 329 - 489
Target Start/End: Original strand, 40411018 - 40411178
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    |||||||||||  |||||||||| ||||||| |||||||||||||||||||||||| ||||||| |||| | ||||||||  |||| ||||||||| | |    
T  40411018 attttctttgttccaaattataaacaaaaaaaaccaacttttatcatatttaattaagtttttttaaaaaaatatcttttttaaagtaaaattaaatgta 40411117  T
Q  429 aagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    || ||||||||||||  ||| ||||||||||||||| ||||||||||||||| ||||||||    
T  40411118 aactgcattcaatttgatctctttttcattttctctgtaatcaactaccaataaaaattgt 40411178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 399 - 489
Target Start/End: Complemental strand, 5064820 - 5064730
Alignment:
Q  399 attatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  5064820 attatctttttcaaaggaaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgt 5064730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 326 - 487
Target Start/End: Complemental strand, 5842017 - 5841856
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    |||||||||||||||| |||||||||| |||||| |  ||||||||||||||||| |||| || |||||||| ||||||||||| |||| |||||| ||     
T  5842017 ttcattttctttgtctaaaattataagtaaaaaagattaacttttatcatatttagttatattgtttcaaaaaattatcttttctaaagaaaaattcaat 5841918  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    |||||||||| ||||||| |||| | ||||||||| || |||| |||  |||||||||||||    
T  5841917 gcaaagtgcaatcaatttgctctctctttcattttttcaataaccaataaccaatgaaaatt 5841856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 327 - 466
Target Start/End: Complemental strand, 8013326 - 8013187
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||   ||||||||| |    
T  8013326 tcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattttttcaaaaaattatcttttccaagtaaaaattaaatg 8013227  T
Q  427 caaagtgcattcaatttactctatttttcattttctctat 466  Q
    |||  |||||||| | |  ||| | |||||||||||||||    
T  8013226 caatttgcattcattatgttctctctttcattttctctat 8013187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 289 - 444
Target Start/End: Original strand, 38940742 - 38940896
Alignment:
Q  289 atatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtt 388  Q
    |||||||| |||||||||||| |||||||        |||||||||||||||||||| ||||||||||||||||||||||||||  ||||  ||||||||    
T  38940742 atatactccctccgtcctaaaatataagcaaaaatatttcattttctttgtctcaaaatataagcaaaaaataccaacttttatgctatt--attatgtt 38940839  T
Q  389 ttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaattta 444  Q
    |||||||| | || ||||||||||| | ||||||||| ||||| |||||||||||||    
T  38940840 ttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattta 38940896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 40553685 - 40553846
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| ||||||||| |||||||  |||||| ||||||||||||||||||||| ||| |||| || |||||||||||||  |||||||| |    
T  40553685 tcattttctttgtcccaaattatatgcaaaaag-accaacatttatcatatttaattatgttatttaaaaaaatcatcttttccaaagagaaattaaatg 40553783  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||| |||||||| ||||||||  |||||| |||||| ||||  ||  |||||||||| ||||    
T  40553784 caaattgcattcattttactctccttttcactttctccataactaataaccaatgaaacttgt 40553846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 327 - 460
Target Start/End: Original strand, 53848382 - 53848515
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||| ||||||||| ||||||||||| |||||| |||||||||||||| |||||||||| || |||||||| || ||||||| ||||| |||| |||| |    
T  53848382 tcatcttctttgtcccaaattataagtaaaaaagaccaacttttatcaaatttaattatattgtttcaaaaaatcatctttttcaaagaaaaaataaatg 53848481  T
Q  427 caaagtgcattcaatttactctatttttcatttt 460  Q
    ||||||||||||||||| || | | |||||||||    
T  53848482 caaagtgcattcaatttgctttctctttcatttt 53848515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 32012536 - 32012395
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||  ||||  |||||||||||||||| | || ||||||| ||| | |||||||||     
T  32012536 tcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 32012439  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||| |||  |||| ||||||||||||||    
T  32012438 gcaaattgcattcaatttattctcctttttattttctctataat 32012395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 469
Target Start/End: Complemental strand, 29180662 - 29180480
Alignment:
Q  286 aaaatatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattat 385  Q
    ||||| ||||| |||||||||||| |||||||         |||| |||||||||||||| ||||||||||||| || |||||||||  ||||  |||||    
T  29180662 aaaatttactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagacaaacttttatgttatt--attat 29180565  T
Q  386 gttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||||||||| | |||||||||||||| | ||||||||| ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  29180564 gttttttcaaagaaattatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 29180480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 329 - 489
Target Start/End: Original strand, 29511363 - 29511502
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||                 |||    
T  29511363 attttctttgt-tcaaattataagcaaaaaatacaaacttttatcatattta-ttatgttttttcaaaaaattatctttt-----------------gca 29511443  T
Q  429 aagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||||  |||||||||||||    
T  29511444 aagtgcattcaatttgctctctttttcattttctctgtaatcaact--caatgaaaattgt 29511502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 469
Target Start/End: Complemental strand, 30776685 - 30776552
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtg 433  Q
    ||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | |||||||||||||| | ||||||||| ||||| ||    
T  30776685 tttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaagaaattatcttttccaatgtaaaattaaatgcaaattg 30776588  T
Q  434 cattcaatttactctatttttcattttctctataat 469  Q
    ||||||||||  |||  |||| |||||||| |||||    
T  30776587 cattcaatttgttctcctttttattttctccataat 30776552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 469
Target Start/End: Original strand, 30777406 - 30777539
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtg 433  Q
    ||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | |||||||||||||| | ||||||||| ||||| ||    
T  30777406 tttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaagaaattatcttttccaatgtaaaattaaatgcaaattg 30777503  T
Q  434 cattcaatttactctatttttcattttctctataat 469  Q
    ||||||||||  |||  |||| |||||||| |||||    
T  30777504 cattcaatttgttctcctttttattttctccataat 30777539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 53677688 - 53677547
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  53677688 tcatattctttgtctcaaaatataagcaaaaaaaaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 53677591  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  53677590 gcaaattgcattcaatttgttctcctttttattttctccataat 53677547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 50768356 - 50768497
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||  |||||  ||||||||||||||| | || ||||||||||| | |||||||||     
T  50768356 tcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 50768453  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  50768454 gcaagttgcatttaatttgttctcctttttattttctccataat 50768497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 37788362 - 37788503
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||| ||||||| |||||| |||||| ||||||||||||  |||||  ||||||||||||||| | || ||||||||||| | |||||||||     
T  37788362 tcattttctttatctcaaaatataagtaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 37788459  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  |||||| |||||  ||| ||||| |||||||| |||||    
T  37788460 gcaacttgcatttaatttgttctcttttttattttctccataat 37788503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 469
Target Start/End: Original strand, 52712934 - 52713115
Alignment:
Q  287 aaatatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatg 386  Q
    |||||||||| |||||||||||| |||||||         |||| |||||||||||||| |||||| |||||| ||||| ||||||  ||||  ||||||    
T  52712934 aaatatactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagtaaaaaagaccaatttttatgctatt--attatg 52713031  T
Q  387 ttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    |||||||||| | || ||||||||||| | ||||||||| ||||| |||||| |||||  |||  |||| |||||||| |||||    
T  52713032 ttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcatttaatttgttctcctttttattttctccataat 52713115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 429
Target Start/End: Complemental strand, 55937912 - 55937811
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||| ||||||  ||||||||||||||| | || ||||||||||| | |||||||||     
T  55937912 tcattttctttgtcttaaaatataagcaaaaaagaccaacttttatgatattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 55937815  T
Q  426 gcaa 429  Q
    ||||    
T  55937814 gcaa 55937811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 441
Target Start/End: Complemental strand, 3043414 - 3043263
Alignment:
Q  289 atatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtt 388  Q
    |||||||| |||||||||||| |||||||         |||| |||||||||||||| ||||||| ||||| | ||||||||||  ||||  ||||||||    
T  3043414 atatactccctccgtcctaaaatataagcaaaaaattatcatattctttgtctcaaaatataagcgaaaaagatcaacttttatgctatt--attatgtt 3043317  T
Q  389 ttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaat 441  Q
    |||||||| | || ||||||||||| | ||||||||| ||||| ||||||||||    
T  3043316 ttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaat 3043263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 39970198 - 39970057
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| || || ||||||  ||||  |||||||||||||||  | || ||||||||||| | |||||||||     
T  39970198 tcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctatt--attatgttttttcaaccaaatcatcttttccaatgtaaaattaaat 39970101  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  39970100 gcaaattgcattcaatttgttctcctttttattttctccataat 39970057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 441
Target Start/End: Original strand, 43980409 - 43980522
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||| ||| |||||| |||||||||||||||||||  ||||  ||||| |||||||||| | || ||||||||||| | |||||||||     
T  43980409 tcatattctttgtcttaaaatataagtaaaaaataccaacttttatgctatt--attatattttttcaaacaaatcatcttttccaatgtaaaattaaat 43980506  T
Q  426 gcaaagtgcattcaat 441  Q
    ||||| ||||||||||    
T  43980507 gcaaattgcattcaat 43980522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 17187038 - 17186968
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||| |||||||| ||||||||| ||||    
T  17187038 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcatgttttttaaaaa 17186968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 4512954 - 4513003
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaatta 384  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  4512954 tttgtcccaaattataagcaaaaaagaccaacttttatcatatttaatta 4513003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 35310999 - 35310918
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatctttt 408  Q
    ||||||||||||||| ||| ||||||||||||| || ||||||||| |||||||||  |||||||| |||| || |||||||    
T  35310999 tcattttctttgtcttaaaatataagcaaaaaagacaaacttttattatatttaatcttgttttttaaaaaaatcatctttt 35310918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 49901937 - 49902079
Alignment:
Q  327 tcattttctttgtctcaaattataagc-aaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||| |||||||||||||| ||||||| |||||| || |||||||||  ||||  |||||||||||||||| | || |||||||||||   |||||||||    
T  49901937 tcatattctttgtctcaaaatataagcaaaaaaaaacaaacttttatgttatt--attatgttttttcaaacaaatcatcttttccaatataaaattaaa 49902034  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  49902035 tgcaaattgcattcaatttgttctcctttttattttctccataat 49902079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 38187935 - 38187794
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||| ||||||| |||||| |||||| | ||||||||||  ||||  | ||||| |||||||| | || ||||||||||| | |||||||||     
T  38187935 tcattttctttatctcaaaatataagtaaaaaagatcaacttttatgctatt--agtatgtattttcaaacaaatcatcttttccaatgtaaaattaaat 38187838  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  ||||||||||||  ||| ||||| |||||||| |||||    
T  38187837 gcaagttgcattcaatttgttctcttttttattttctccataat 38187794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 443
Target Start/End: Complemental strand, 30012161 - 30012046
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatc--ttttccaaaggaaaattaaaa 425  Q
    ||||||||||||| |||| ||||||||||||| | ||||||||||  ||||  |||||||||||| |||| |  |||   ||||||||| |||||||||     
T  30012161 cattttctttgtcccaaaatataagcaaaaaagatcaacttttattctatt--attatgttttttaaaaaaaaaatcatctttccaaagtaaaattaaat 30012064  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||| ||||||||||||    
T  30012063 gcaaattgcattcaattt 30012046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 29899626 - 29899741
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||| ||||| ||||  ||||||||||||| ||||||||||||  |||||  ||||||||||||||| | || ||||||||||| | |||||||||     
T  29899626 tcattttgtttgtttcaacatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 29899723  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||  |||||| |||||    
T  29899724 gcaagttgcatttaattt 29899741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 1619940 - 1620081
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||| || |||| ||||||||||||  ||||  ||||| |||||||||| | || ||||||| ||| | |||||||||     
T  1619940 tcatattctttgtctcaaaatataatcataaaacaccaacttttatgctatt--attatattttttcaaacaaatcatctttttcaatgtaaaattaaat 1620037  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  ||||||||||||  |||  |||| |||||||| |||||    
T  1620038 gcaatttgcattcaatttgttcttctttttattttctccataat 1620081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 441
Target Start/End: Complemental strand, 9798284 - 9798171
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||| ||| ||| ||||||||||||| | ||||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  9798284 tcatattctttatcttaaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 9798187  T
Q  426 gcaaagtgcattcaat 441  Q
    ||||| || |||||||    
T  9798186 gcaaattggattcaat 9798171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 443
Target Start/End: Complemental strand, 27750558 - 27750442
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||||||||||| ||||||| |||||||| || | ||||||||||||  |||||  ||||||| ||||||| | || ||||||||||| | |||||||||    
T  27750558 ttcattttctttatctcaaaatataagcataacagaccaacttttatgctattt--ttatgttatttcaaacaaatcatcttttccaatgtaaaattaaa 27750461  T
Q  425 agcaaagtgcattcaattt 443  Q
     ||||  |||||| |||||    
T  27750460 tgcaagttgcatttaattt 27750442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 16605091 - 16605021
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||  ||||||||  |||||||| ||||    
T  16605091 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatgctatttaatattgtttttttaaaa 16605021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 42915427 - 42915489
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||| |||| ||||||||||||| || ||||||||| |||||||||  |||||||    
T  42915427 attttctttgtcccaaaatataagcaaaaaagacaaacttttattatatttaatcttgttttt 42915489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 442
Target Start/End: Complemental strand, 10591703 - 10591598
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtg 433  Q
    ||||||||||| |||||| |||||| || || ||||||  ||||  |||||||||||||||| | || ||||||||||| | ||||||||| ||||| ||    
T  10591703 tttgtctcaaaatataag-aaaaaagactaatttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattg 10591607  T
Q  434 cattcaatt 442  Q
    |||||||||    
T  10591606 cattcaatt 10591598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 469
Target Start/End: Original strand, 47807158 - 47807247
Alignment:
Q  381 attatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    |||||||||||||||| | || ||||||||||| | ||||||||| ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  47807158 attatgttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 47807247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 48793882 - 48793798
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    |||||||||||||| |||| |||||||| |||| || |||||||||  ||||||||  |||||||| |||| || |||||||||||    
T  48793882 tcattttctttgtcccaaaatataagcataaaagacaaacttttattctatttaatcttgtttttt-aaaaaatcatcttttccaa 48793798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 469
Target Start/End: Original strand, 51495112 - 51495201
Alignment:
Q  381 attatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    |||||||||||| ||| | || ||||||||||| | ||||||||| ||||| ||||||||||||| |||  |||| |||||||| |||||    
T  51495112 attatgtttttttaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataat 51495201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 35529568 - 35529632
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt 392  Q
    ||||||||||||| |||| ||||||||||||| || |||||||||  ||||||||  ||||||||    
T  35529568 cattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgtttttt 35529632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 4058614 - 4058680
Alignment:
Q  331 tttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||  ||| ||||||||||||| || |||||||||| ||||||||  |||||||| ||||    
T  4058614 tttctttgtcctaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttttaaaaa 4058680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 39078053 - 39078107
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaa 381  Q
    |||||||||||||| |||| |||||| |||||| || |||||||||| |||||||    
T  39078053 tcattttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatttaa 39078107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 2229175 - 2229220
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  2229175 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 2229220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 489
Target Start/End: Original strand, 4058719 - 4058792
Alignment:
Q  416 aaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||  |||||||||||||||    
T  4058719 aaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgt 4058792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 14332687 - 14332732
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  14332687 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 14332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 413
Target Start/End: Complemental strand, 21181166 - 21181086
Alignment:
Q  333 tctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtt-ttttcaaaagattatcttttccaaa 413  Q
    |||||||| ||||||||||  |||||| || || ||||||| ||||||||||||||  ||||||||| | ||||||||||||    
T  21181166 tctttgtcccaaattataaataaaaaagacaaatttttatcctatttaattatgttggtttcaaaag-tcatcttttccaaa 21181086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 26916253 - 26916298
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    |||||||||||||||||| ||||||||||||| |  ||||||||||    
T  26916253 cattttctttgtctcaaaatataagcaaaaaagataaacttttatc 26916298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 371
Target Start/End: Original strand, 55580563 - 55580607
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaactttta 371  Q
    |||||||||||||| |||| ||||||||||||| || ||||||||    
T  55580563 tcattttctttgtcccaaaatataagcaaaaaagacaaactttta 55580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 2e-68; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 326 - 489
Target Start/End: Original strand, 26998233 - 26998396
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||     
T  26998233 ttcattttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatattttttcaaaaaattatcttttccaaaggaaaattaaat 26998332  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  26998333 gcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgt 26998396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 38070913 - 38071074
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  38070913 tcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatg 38071012  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
     |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  38071013 taaagtgcattcaatttgctcta-ttttcattttctctataatcaactaccaatgaaaattgt 38071074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 331 - 489
Target Start/End: Original strand, 32273592 - 32273750
Alignment:
Q  331 tttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaa 430  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||    
T  32273592 tttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatattttccaaaggaaaattaaatgtaaa 32273691  T
Q  431 gtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  32273692 gtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgt 32273750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 328 - 483
Target Start/End: Original strand, 20380041 - 20380196
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagc 427  Q
    |||||| |||| | |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  20380041 cattttgtttgacccaaattataagcaaaaaagaccaacttttatcttatttaattatgttttttcaaaatattatcttttccaaaggaaaattaaatgc 20380140  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaa 483  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  20380141 aaagtgcattcaatttgctctcgttttcattttctctataatcaactaccaatgaa 20380196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 293 - 487
Target Start/End: Original strand, 32009985 - 32010179
Alignment:
Q  293 actctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt 392  Q
    |||| |||| |||||||||||||||        ||||||||||||||  ||||||||||| |||||| | ||||||||||||||||||||||| ||||||    
T  32009985 actccctccatcctaaattataagcaaaaaaaattcattttctttgttccaaattataagtaaaaaagatcaacttttatcatatttaattatatttttt 32010084  T
Q  393 caaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  32010085 caaaaaattatctttttcaaaggaaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaatt 32010179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 343 - 489
Target Start/End: Complemental strand, 4891866 - 4891720
Alignment:
Q  343 aaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatt 442  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| | ||||||||||||||     
T  4891866 aaattataagcaaaaaatatcaacttttatcatatttaattatgttttttcaaaaaattatatttttcaaaggaaaattaaatgtaaagtgcattcaatc 4891767  T
Q  443 tactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    | |||| ||||||||||||| ||||||||||||||||| ||||||||    
T  4891766 tgctctctttttcattttctttataatcaactaccaataaaaattgt 4891720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 44442050 - 44442210
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaaga-ttatcttttccaaaggaaaattaaaa 425  Q
    |||||||||||||| ||||||||||| |||||  | ||||||||||  |||||||||||||||||| |||| | |||||||||| ||||||||||||||     
T  44442050 tcattttctttgtcccaaattataaggaaaaag-agcaacttttat--tatttaattatgttttttgaaaaaaattatcttttctaaaggaaaattaaat 44442146  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||| || | |||||||||||||||||||||||||| |||||||||||||    
T  44442147 gcaaagtgcattcaatttgctatctttttcattttctctataatcaactatcaatgaaaattgt 44442210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 489
Target Start/End: Original strand, 9709432 - 9709592
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||| ||||||||||  |||||| || ||||||||||||||||||||||||| |||||||| ||||||||| |||||| |||||| || ||    
T  9709432 cattttctttgtcccaaattataataaaaaaagactaacttttatcatatttaattatgttgtttcaaaaaattatctttaccaaagaaaaatt-aatgc 9709530  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||| ||||||||||||  ||| | |||||||||||| ||||||||  || ||||||||||||    
T  9709531 aaattgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgt 9709592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 331 - 468
Target Start/End: Complemental strand, 11031162 - 11031025
Alignment:
Q  331 tttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaa 430  Q
    |||||||| ||||||||||||| |||||| | |||||||||||||||||||||||||| ||| |||| ||| || |||||||| |||||||||| |||||    
T  11031162 tttctttgactcaaattataagtaaaaaagatcaacttttatcatatttaattatgttgttttaaaaaattgtcatttccaaaagaaaattaaatgcaaa 11031063  T
Q  431 gtgcattcaatttactctatttttcattttctctataa 468  Q
    ||||||||||||| |||| | |||||||||||| ||||    
T  11031062 gtgcattcaatttgctctctctttcattttctcaataa 11031025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 115 - 289
Target Start/End: Original strand, 21405163 - 21405331
Alignment:
Q  115 tcacaagaacggtacaacttgagggtccacaaagtttgagatatgtaagacatgtttctttcaggaattctccaaaaataaaatcatatagaatcttcta 214  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| ||      ||||||| || | ||||||||    
T  21405163 tcacaggaacagtacaacttgatggtccacaaagtttgagatatgtaagacatgtttccttgaggaattcacc------aaaatcacatgggatcttcta 21405256  T
Q  215 atacaataaaagaaaatatattagtaattcaggtgggtcgataaatcaactattacgaagaaaccaattaaaaaa 289  Q
    | | ||||||||| |||| ||||| || ||| |||||||||||||| ||||||||| |||||||| | |||||||    
T  21405257 agataataaaagataatacattagcaactcaagtgggtcgataaataaactattacaaagaaaccgaataaaaaa 21405331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 329 - 489
Target Start/End: Complemental strand, 8032910 - 8032749
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    |||||||||||| ||||||||||| ||||||| |  |||||||||||||||||||||||| ||| |||| |||||||||| ||||| ||||||||| |||    
T  8032910 attttctttgtcccaaattataagtaaaaaatgcatacttttatcatatttaattatgttgttttaaaaaattatctttttcaaagaaaaattaaatgca 8032811  T
Q  429 aagtgcattcaatttactctat-ttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    || |||||||||||| |||| |  |||||||||||| ||||  | | |||||| ||||||||    
T  8032810 aaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgt 8032749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 289 - 469
Target Start/End: Original strand, 21539633 - 21539812
Alignment:
Q  289 atatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtt 388  Q
    |||||||| |||||||||||| |||||||         ||||||||||||||||||| ||||||||||||| ||||||||||||  ||||  ||||||||    
T  21539633 atatactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgtt 21539730  T
Q  389 ttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    |||||||| | || ||||||||||| | ||||||||| ||||  ||||||||||||  |||  |||| |||||||| |||||    
T  21539731 ttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataat 21539812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 469
Target Start/End: Complemental strand, 792639 - 792457
Alignment:
Q  286 aaaatatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattat 385  Q
    |||| |||||| |||||||||||| |||||||         |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||    
T  792639 aaaacatactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attat 792542  T
Q  386 gttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||||||||| | || ||||||||||| | ||||||||| ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  792541 gttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 792457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 329 - 437
Target Start/End: Complemental strand, 16179940 - 16179833
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    ||||||||| || ||||||||||| |||||| ||||| |||||||||||||||| || || |||||||| ||||| |||||||||||||||||||| | |    
T  16179940 attttctttatc-caaattataagtaaaaaagaccaatttttatcatatttaatgatattgtttcaaaaaattattttttccaaaggaaaattaaatgta 16179842  T
Q  429 aagtgcatt 437  Q
    |||||||||    
T  16179841 aagtgcatt 16179833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 29514261 - 29514120
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || |||||||  || | |||||||||     
T  29514261 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttttaatgtaaaattaaat 29514164  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| ||||||||||||||    
T  29514163 gcaaattgcattcaatttgttctcatttttattttctctataat 29514120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 469
Target Start/End: Original strand, 28492436 - 28492575
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||||  ||||  ||||| |||||||||| | || || |||||||| | ||||||||| ||    
T  28492436 attttctttgtcttaaaatataagcaaaaaagaccaacttttatgctatt--attatattttttcaaacaaatcattttttccaatgtaaaattaaatgc 28492533  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||| ||||||||| ||| |||  |||| ||||||||||||||    
T  28492534 aaattgcattcaacttattctcctttttattttctctataat 28492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 38549885 - 38549770
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  38549885 tcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaataaatcatcttttccaatgtaaaattaaat 38549788  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||  ||||||||||||    
T  38549787 gcaagttgcattcaattt 38549770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 33635250 - 33635391
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||  |||||  ||||||||||||||| | || |||||||| || | |||||||||     
T  33635250 tcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttctaatgtaaaattaaat 33635347  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  33635348 gcaagttgcatttaatttgttctcctttttattttctccataat 33635391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 440
Target Start/End: Complemental strand, 15858888 - 15858740
Alignment:
Q  291 atactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttt 390  Q
    |||||| |||||||||||| |||||||        ||||| |||||||||||||| |||||| |||||| ||||| ||||||  ||||  ||||||||||    
T  15858888 atactccctccgtcctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagtaaaaaagaccaaattttatgctatt--attatgtttt 15858791  T
Q  391 ttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaa 440  Q
    |||||| | || ||||||||||| | ||||||||| ||||| |||||||||    
T  15858790 ttcaaataaatcatcttttccaatgtaaaattaaatgcaaattgcattcaa 15858740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 469
Target Start/End: Original strand, 28424193 - 28424329
Alignment:
Q  332 ttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaa 430  Q
    |||||||||||||| | ||||||||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||||||| | ||||||||| |||||    
T  28424193 ttctttgtctcaaaatttaagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 28424290  T
Q  431 gtgcattcaatttactctatttttcattttctctataat 469  Q
     || |||||||||  |||  |||| |||||||| |||||    
T  28424291 ttgtattcaatttgttctcctttttattttctccataat 28424329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 469
Target Start/End: Complemental strand, 4033915 - 4033776
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||||||| ||||||||||||| | ||| ||||||  ||||  |||||||||||||||| | |  ||||||| ||| | ||||||||| ||    
T  4033915 attttctttgtctcaaaatataagcaaaaaagatcaatttttatgctatt--attatgttttttcaaacaaaacatctttttcaatgtaaaattaaatgc 4033818  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||| ||||||||||||| |||  |||| |||||||| |||||    
T  4033817 aaattgcattcaatttattctcctttttattttctccataat 4033776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 443
Target Start/End: Original strand, 43075672 - 43075779
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtg 433  Q
    ||||| ||||| ||||||||||||||||||||||||||  ||||  |||||||||||||||| | || |||| |||||| | ||||||||| ||||| ||    
T  43075672 tttgtgtcaaaatataagcaaaaaataccaacttttatgctatt--attatgttttttcaaacaaatcatctattccaatgtaaaattaaatgcaaattg 43075769  T
Q  434 cattcaattt 443  Q
    ||||||||||    
T  43075770 cattcaattt 43075779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 469
Target Start/End: Complemental strand, 14565611 - 14565474
Alignment:
Q  332 ttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaag--attatcttttccaaaggaaaattaaaagcaa 429  Q
    |||||||||||||| ||||||||||||| || |||||||||  ||||  ||||||||||||  ||||  || ||||||||||| | ||||||||| ||||    
T  14565611 ttctttgtctcaaaatataagcaaaaaagactaacttttatgctatt--attatgtttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaa 14565514  T
Q  430 agtgcattcaatttactctatttttcattttctctataat 469  Q
    | |||||| |||||  |||  |||| |||||||| |||||    
T  14565513 attgcatttaatttgttctcctttttattttctccataat 14565474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 21404962 - 21405044
Alignment:
Q  9 acatcatcaatgaatcttaggcctaatacgaaa-aggtatatatccttattgtgaacgcttcgagacgatgacaaaccctttttgcaaa 96  Q
    ||||||||||||||||||||||||||||||| | ||| |      ||||| |||||||||| |||||||||||||||||||||||||||    
T  21404962 acatcatcaatgaatcttaggcctaatacgacacaggaa------cttatggtgaacgcttggagacgatgacaaaccctttttgcaaa 21405044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 441
Target Start/End: Original strand, 8784309 - 8784422
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| |||||| |||||| ||||||||||||  ||||  |||||||| ||||||| | || ||||||| ||| | |||||||||     
T  8784309 tcatattctttgtctcaaaatataagtaaaaaagaccaacttttatgctatt--attatgttatttcaaacaaatcatctttttcaatgtaaaattaaat 8784406  T
Q  426 gcaaagtgcattcaat 441  Q
    ||||| ||||||||||    
T  8784407 gcaaattgcattcaat 8784422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 289 - 443
Target Start/End: Complemental strand, 29514754 - 29514602
Alignment:
Q  289 atatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtt 388  Q
    |||||||| |||||||||||| |||||||         |||| |||||||||||||| |||||| |||||| ||||||||||||  ||||  ||||||||    
T  29514754 atatactcgctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataag-aaaaaagaccaacttttatgctatt--attatgtt 29514658  T
Q  389 ttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    |||||||| | || |||||| |||| | ||||||||| | ||| ||||||||||||    
T  29514657 ttttcaaacaaatcatctttcccaatgtaaaattaaatgtaaattgcattcaattt 29514602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 397
Target Start/End: Original strand, 19263997 - 19264067
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||  |||||||| ||||    
T  19263997 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaa 19264067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 8701499 - 8701584
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    ||||||||||| ||| ||| ||||| ||||||| || ||||||||| |||||||||  |||||||| |||| || |||||||||||    
T  8701499 tcattttctttatcttaaaatataaacaaaaaagacaaacttttattatatttaatcttgttttttaaaaaaatcatcttttccaa 8701584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 28858207 - 28858272
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt 392  Q
    ||||||||||||||  ||| |||||||||||||||| |||||||||| ||||||||  ||||||||    
T  28858207 tcattttctttgtcctaaaatataagcaaaaaatacaaacttttatcctatttaatcttgtttttt 28858272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 466
Target Start/End: Complemental strand, 33933164 - 33933023
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagatt-atcttttccaaaggaaaattaaa 424  Q
    ||||||||||||| |   ||||||||| |||||| |  || |||||| ||||||||||| ||| |||||||| | | ||||||||||||| |||||||||    
T  33933164 ttcattttctttgcccttaattataagaaaaaaagattaatttttattatatttaattacgttatttcaaaaaaatcatcttttccaaagaaaaattaaa 33933065  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctat 466  Q
     | ||  |||||||| ||| ||||   |||||||||||||||    
T  33933064 tgtaagttgcattcattttgctcttactttcattttctctat 33933023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 4091924 - 4092040
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattat-gttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||  ||||  |||||  |||||||||| | || ||||||| ||| | |||||||||    
T  4091924 tcattttctttgtctcaaaatataagcaagaaaaaccaacttttatgctatt--attatatttttttcaaataaatcatctttttcaatgtaaaattaaa 4092021  T
Q  425 agcaaagtgcattcaattt 443  Q
     ||||  ||||||||||||    
T  4092022 tgcaagttgcattcaattt 4092040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 441
Target Start/End: Original strand, 35832331 - 35832439
Alignment:
Q  332 ttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaa 430  Q
    |||||||||||||| ||||||||||||| ||  | ||||||  ||||  |||||||||||||||| | || |||||||||||   ||||||||| |||||    
T  35832331 ttctttgtctcaaaatataagcaaaaaagacatatttttatgctatt--attatgttttttcaaacaaatcatcttttccaatataaaattaaatgcaaa 35832428  T
Q  431 gtgcattcaat 441  Q
     ||||||||||    
T  35832429 ttgcattcaat 35832439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 45660260 - 45660315
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaat 382  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||    
T  45660260 tcattttctttgtcccaaaatataagcaaaaaaaacaaacttttatcctatttaat 45660315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 439
Target Start/End: Complemental strand, 921775 - 921677
Alignment:
Q  342 caaattataagcaaaaaataccaactttt-atcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattca 439  Q
    |||||||||||  ||||| || ||||||| ||||||||||||||||||||||||||| || || ||||| |||   |||||||| ||||  ||||||||    
T  921775 caaattataaggcaaaaagactaactttttatcatatttaattatgttttttcaaaaaataatattttctaaaaagaaattaaatgcaatatgcattca 921677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 414
Target Start/End: Original strand, 10979069 - 10979191
Alignment:
Q  290 tatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttt 389  Q
    |||||||||||| ||||||| |||||||         ||||||| ||||||||||| |||| |||||||| ||||||||||||  |||||  ||||||||    
T  10979069 tatactctctccttcctaaaatataagcaaaaaaatctcattttttttgtctcaaaatata-gcaaaaaagaccaacttttatgctattt--ttatgttt 10979165  T
Q  390 tttcaaa-agattatcttttccaaag 414  Q
    ||||||| | || |||||||||||||    
T  10979166 tttcaaacaaatcatcttttccaaag 10979191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 397
Target Start/End: Original strand, 25571942 - 25572012
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||  ||||||||  |||||||| ||||    
T  25571942 tcattttctttgtcccaaaatataagcaaaaaaaacaaacttttattctatttaatcttgttttttaaaaa 25572012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 372
Target Start/End: Original strand, 15068624 - 15068705
Alignment:
Q  291 atactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    |||||| ||||||| ||||||||||||        |||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  15068624 atactccctccgtcttaaattataagcaaaaaaaattcattttctttgtctcaaaatataagcaaaaaagatcaatttttat 15068705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 469
Target Start/End: Complemental strand, 18834153 - 18834011
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt----caaaagattatcttttccaaaggaaaattaa 423  Q
    ||||||||||||| |||| ||||||||||||| | ||||||||||  ||||  ||||||||||||     |||| || ||| |||| |||| ||||||||    
T  18834153 cattttctttgtcccaaaatataagcaaaaaagatcaacttttattctatt--attatgttttttttaaaaaaaaatcatc-tttctaaagtaaaattaa 18834057  T
Q  424 aagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    | ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  18834056 atgcaaattgcattcaatttgttctcctttttattttctccataat 18834011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 33198897 - 33198832
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt 392  Q
    |||||||||||||| |||| ||||||||||||| || || ||||||| ||||||||  ||||||||    
T  33198897 tcattttctttgtcccaaaatataagcaaaaaagacaaaattttatcctatttaatcttgtttttt 33198832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 392
Target Start/End: Complemental strand, 5280741 - 5280678
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt 392  Q
    |||||||||||| |||| ||||||||||||| || || ||||||| ||||||||  ||||||||    
T  5280741 attttctttgtcccaaaatataagcaaaaaagacaaatttttatcctatttaatcttgtttttt 5280678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 30830749 - 30830682
Alignment:
Q  417 aaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaa 484  Q
    |||||||| ||||| | ||| |||||| |||| |||||||||||||| ||||||||  ||||||||||    
T  30830749 aaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaa 30830682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 6110431 - 6110386
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  6110431 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 6110386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 15068723 - 15068764
Alignment:
Q  402 atcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||    
T  15068723 atcttttccaaagtaaaattaaatgcaaattgcattcaattt 15068764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 22162286 - 22162347
Alignment:
Q  381 attatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaat 441  Q
    |||||||||||||||| | || ||||||||||| | ||||||||| ||||| ||||||||||    
T  22162286 attatgttttttcaaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaat 22162347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 10478089 - 10478233
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaata--ccaacttttatcatatttaattatgtttttt-caaa-agattatcttttccaaaggaaaatta 422  Q
    ||||||| ||||||||||| ||||||||||||| |  |||| ||||||  |||||  ||||||||||| |||| | || ||||||||||| | |||||||    
T  10478089 tcattttttttgtctcaaaatataagcaaaaaaaaaaccaatttttatgctattt--ttatgtttttttcaaacaaatgatcttttccaatgtaaaatta 10478186  T
Q  423 aaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    || ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  10478187 aatgcaagttgcatttaatttgttctcctttttattttctccataat 10478233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 391
Target Start/End: Complemental strand, 29524303 - 29524239
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||||| |||| |||||| |||||| || |||||||||  ||||||||  |||||||    
T  29524303 tcattttctttgtcccaaaatataagtaaaaaagacaaacttttattctatttaatattgttttt 29524239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 489
Target Start/End: Complemental strand, 40584551 - 40584479
Alignment:
Q  417 aaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||| ||||| | |||||||||| |||| | |||||||||  | |||| |||| |||||||||||||||    
T  40584551 aaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgt 40584479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 326 - 489
Target Start/End: Original strand, 7397623 - 7397785
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||| ||||||||||||||||||  | ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||     
T  7397623 ttcattttctttgtcccaaattataagcaaaaaagcctaacttttatcatatttaatta-gttttttcaaaaaattatcttttccaaaggaaaattaaat 7397721  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||    
T  7397722 gcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgt 7397785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 16661432 - 16661595
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||| |||||||||| |||  |||||||||| |    
T  16661432 tcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaaaaattatctttttcaatagaaaattaaatg 16661531  T
Q  427 caaagtgcattcaatttactct-atttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||  |||  |||||||||||||||| |||||||||||||| ||||||||    
T  16661532 caaagtgcattcaatttgttctcttttttcattttctctagaatcaactaccaataaaaattgt 16661595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 329 - 489
Target Start/End: Original strand, 37538728 - 37538888
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    |||||||||||| |||||||||| ||||||| | |||||||||||||||||||||||||| |||||||| |||||||||| || |||||||||||  |||    
T  37538728 attttctttgtcccaaattataaacaaaaaagatcaacttttatcatatttaattatgttgtttcaaaaaattatcttttacataggaaaattaactgca 37538827  T
Q  429 aagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||| |||  | |||||||||||| |||| |||| |||||||||||||||    
T  37538828 aagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgt 37538888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 327 - 489
Target Start/End: Complemental strand, 5858616 - 5858453
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaat-accaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||| || ||||||||||||||||||  || ||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||     
T  5858616 tcattttctttatcccaaattataagcaaaaaaagacaaacttttatcatatttaattatgttgtttcaaaaaattatctttttcaaaggaaaattaaat 5858517  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||| |||| | |||||||||||| |||| |||   ||||||||||||||    
T  5858516 gcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgt 5858453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 291 - 487
Target Start/End: Original strand, 41063622 - 41063818
Alignment:
Q  291 atactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttt 390  Q
    |||||||||| ||||||||||||||||         ||||||| |||||| ||||||||||| |||||| ||||||||||||||| ||||||||| || |    
T  41063622 atactctctctgtcctaaattataagcaaaaaaaactcattttatttgtcccaaattataagaaaaaaagaccaacttttatcatttttaattatattgt 41063721  T
Q  391 ttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    ||||||| |||||||||| ||||| ||||||||| ||||||||||||||||||  ||| | ||| |||||||| ||||  ||  |||||||||||||    
T  41063722 ttcaaaaaattatctttttcaaagaaaaattaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaatt 41063818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 342 - 489
Target Start/End: Original strand, 13351612 - 13351759
Alignment:
Q  342 caaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaat 441  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||| |||| |  |    |||| |||||||| |||| ||||||||||||||||    
T  13351612 caaattataagcaaaaaagaccaacttttattatatttaattatgttttttaaaaaaaaaaaaaattccgaaggaaaactaaatgcaaagtgcattcaat 13351711  T
Q  442 ttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||  |||  |||||||||||||||||||||||||||||||||||||||    
T  13351712 ttgttctccttttcattttctctataatcaactaccaatgaaaattgt 13351759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 15912117 - 15912277
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||| ||||||||  ||||||||||| ||||||   |||||||||||||||||||||||||| |||||||| || || |||||||||| ||||||||| |    
T  15912117 tcatattctttgttccaaattataaggaaaaaaa--caacttttatcatatttaattatgttatttcaaaaaatcattttttccaaagaaaaattaaatg 15912214  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||| |||||||||||| ||||  |||||||||||||| |||||||| | |||||||||||||    
T  15912215 caaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgt 15912277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 489
Target Start/End: Complemental strand, 25185497 - 25185386
Alignment:
Q  378 ttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactacc 477  Q
    |||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  25185497 ttaaatatgttttttcaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactacc 25185398  T
Q  478 aatgaaaattgt 489  Q
    ||||||| ||||    
T  25185397 aatgaaagttgt 25185386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 327 - 489
Target Start/End: Complemental strand, 34102215 - 34102055
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||| ||| ||||||||||| ||||||| || ||||||||||||||||||||||||| |||||||| || ||||||| ||||||||||||||| |    
T  34102215 tcattttctctgtatcaaattataaacaaaaaagacaaacttttatcatatttaattatgttatttcaaaa-atcatctttttcaaaggaaaattaaatg 34102117  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||| ||||||| |||| | ||||| |||||| |||| |||  |||||||||||||||    
T  34102116 caaagtgca-tcaatttgctctctctttcactttctcaataaccaataaccaatgaaaattgt 34102055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 326 - 443
Target Start/End: Complemental strand, 35366448 - 35366331
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    |||||||||||||||  ||||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||     
T  35366448 ttcattttctttgtccaaaattataagcaaaaaagatcaacttttatcatatttaattatgttgtttcaaaaaattatattttccaaagaaaaattaaat 35366349  T
Q  426 gcaaagtgcattcaattt 443  Q
     |||||||||||||||||    
T  35366348 tcaaagtgcattcaattt 35366331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 343 - 487
Target Start/End: Complemental strand, 30701611 - 30701469
Alignment:
Q  343 aaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatt 442  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||||||| |||| ||||| |||| |||| ||||||||||   || || |||||||||    
T  30701611 aaattataag-aaaaaagaccaa-ttttatcatatttaattatgtttttttaaaaaattatttttttcaaaagaaaattaaatataaggtacattcaatt 30701514  T
Q  443 tactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    | |||| ||||||||||||||||||||||||||||||||||||||    
T  30701513 tgctctctttttcattttctctataatcaactaccaatgaaaatt 30701469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 5950356 - 5950518
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| || |||| |||||||||| || || |||||||||||||||||||  | | |||||| |||||||||||||||||||||||||| |    
T  5950356 tcattttctttgtcccagattacaagcaaaaaagacaaatttttatcatatttaattataatgtctcaaaaaattatcttttccaaaggaaaattaaatg 5950455  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
     |||||||||| ||||| |||| | ||||||||| || |||| |||  |||||||||||||||    
T  5950456 taaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgt 5950518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 44510406 - 44510301
Alignment:
Q  384 atgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaa 483  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||| || |||||||    
T  44510406 atgttttttcaaaaaattaccttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaa 44510307  T
Q  484 aattgt 489  Q
    ||||||    
T  44510306 aattgt 44510301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 329 - 461
Target Start/End: Original strand, 43359609 - 43359741
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    ||||||||||||||||||||||| ||||||| |  || |||||||||||||||||||||| ||| ||||  ||||||||| |||| |||||||||| |||    
T  43359609 attttctttgtctcaaattataaacaaaaaagataaatttttatcatatttaattatgttgttttaaaaatttatctttttcaaaagaaaattaaatgca 43359708  T
Q  429 aagtgcattcaatttactctatttttcattttc 461  Q
    |||| |||||||||| |||| | ||||||||||    
T  43359709 aagtacattcaatttgctctctctttcattttc 43359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 327 - 489
Target Start/End: Complemental strand, 45840292 - 45840147
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| ||||||||||||||||||   ||| ||||||||||||||||||||||||||||||                 | ||||||||| |    
T  45840292 tcattttctttgtcccaaattataagcaaaaaagttcaaattttatcatatttaattatgttttttcaaa-----------------gaaaaattaaatg 45840210  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||    
T  45840209 caaagtgcattcaatttgctctctttttcattttttctataatcaactaccaatgaaaattgt 45840147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 354 - 446
Target Start/End: Original strand, 13050294 - 13050386
Alignment:
Q  354 aaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttact 446  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| | ||| ||||| ||||||||||||||  ||||||||||||||||||||    
T  13050294 aaaaaaaaccaacttttatcatatttaattatattttttcaaaaaactatattttcgaaaggaaaattaaatacaaagtgcattcaatttact 13050386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 26907335 - 26907194
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||  ||||  |||||||||||||||| | |||||||||| ||| | |||||||||     
T  26907335 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaattatctttttcaatgtaaaattaaat 26907238  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||| |||  |||| |||||||| |||||    
T  26907237 gcaaattgcattcaatttattctcctttttattttctccataat 26907194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 51339143 - 51339040
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||| ||||||||||| |||||| || ||||||||| |||||||||||| ||||||||||| || |||||||||||||  ||||||||     
T  51339143 ttcattttctttgtcgcaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaaaaatcatcttttccaaagagaaattaaat 51339044  T
Q  426 gcaa 429  Q
    ||||    
T  51339043 gcaa 51339040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 327 - 462
Target Start/End: Original strand, 18036459 - 18036592
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||||||||| |||||||||     
T  18036459 tcattttctttgtctcaaaatataag-aaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaaagtaaaattaaat 18036555  T
Q  426 gcaaagtgcattcaatttactctatttttcattttct 462  Q
    ||||| ||||||||||||| |||  |||| |||||||    
T  18036556 gcaaattgcattcaatttattctcctttttattttct 18036592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 44875093 - 44875234
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  44875093 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 44875190  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  44875191 gcaaattgcattcaatttgttctcctttttattttctccataat 44875234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 51840741 - 51840638
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    |||||||||||||||  |||||||||| |||||| || ||||||||| |||||||||||| ||||||||||| || |||||||||||||  ||||||||     
T  51840741 ttcattttctttgtcgtaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaaaaatcatcttttccaaagagaaattaaat 51840642  T
Q  426 gcaa 429  Q
    ||||    
T  51840641 gcaa 51840638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 23874073 - 23873932
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| |||| |||||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  23874073 tcatattctttgtctcaaaatatacgcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 23873976  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| |||||| |||||  ||| ||||| |||||||| |||||    
T  23873975 gcaaattgcatttaatttgttctcttttttattttctccataat 23873932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 25990662 - 25990803
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||| ||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  25990662 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 25990759  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  25990760 gcaaattgcattcaatttgttctcctttttattttctccataat 25990803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 29488662 - 29488803
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || || |||||||| | |||||||||     
T  29488662 tcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaataatattttccaatgtaaaattaaat 29488759  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  ||||||||||||  |||  |||| |||||||| |||||    
T  29488760 gcaagttgcattcaatttgttctcctttttattttctccataat 29488803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 40219971 - 40220111
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||| |||||||||||||| ||||||||||||| || || ||||||  ||||  ||||||||||||||||  | |||||||||||| | ||||||||| |    
T  40219971 tcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctatt--attatgttttttcaaacaaatatcttttccaatgtaaaattaaatg 40220068  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataat 469  Q
    |||| ||||||||||||  |||  |||| |||||||| |||||    
T  40220069 caaattgcattcaatttgttctcctttttattttctccataat 40220111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 468
Target Start/End: Complemental strand, 46804775 - 46804634
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| |||||||||| || |||| || ||| ||||||||||||||| || ||||||||||| ||  |||||||||| |  |||||||| |    
T  46804775 tcattttctttgtcccaaattataaacagaaaagactaacgtttatcatatttaataatattttttcaaaaaatcttcttttccaaggagaaattaaatg 46804676  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataa 468  Q
    |||  |||||||| | | || | | |||||||||||||||||    
T  46804675 caatttgcattcattatgctttctctttcattttctctataa 46804634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 469
Target Start/End: Original strand, 46949198 - 46949376
Alignment:
Q  290 tatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttt 389  Q
    ||||||| |||||||||||| |||||||         |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||    
T  46949198 tatactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgttt 46949295  T
Q  390 tttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||||| | || ||||||| ||| | ||||||||| ||||| || |||||||||  |||  |||| |||||||| |||||    
T  46949296 tttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgtattcaatttgttctcctttttattttctccataat 46949376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 35941755 - 35941896
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| | ||||||||||  ||||  |||||||||||||||| | || ||||||| ||| | |||||||||     
T  35941755 tcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgctatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 35941852  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     |||| ||||||||||||  ||| ||||| |||||||| |||||    
T  35941853 acaaattgcattcaatttgttctcttttttattttctccataat 35941896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 38942687 - 38942546
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||  ||||  |||||||||||||||| | || || |||||||| | |||||||||     
T  38942687 tcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaacaaatcattttttccaatgtaaaattaaat 38942590  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  ||||||||||||  |||  |||| |||||||| |||||    
T  38942589 gcaagttgcattcaatttgttctcctttttattttctccataat 38942546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 443
Target Start/End: Original strand, 4529100 - 4529216
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||||||| ||||||||||| ||||||||||||| | ||||||||||  ||||  |||||||||||||||| | || || |||||||| | |||||||||    
T  4529100 ttcattttttttgtctcaaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaataaatcattttttccaatgtaaaattaaa 4529197  T
Q  425 agcaaagtgcattcaattt 443  Q
     ||||| ||||||||||||    
T  4529198 tgcaaattgcattcaattt 4529216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 429
Target Start/End: Original strand, 49924298 - 49924434
Alignment:
Q  292 tactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||||||||| |||||||         ||||||||||||||||||| ||||||||||||| | ||||||||||  |||||  ||||||||||    
T  49924298 tactctctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgttttt 49924395  T
Q  392 tcaaa-agattatcttttccaaaggaaaattaaaagcaa 429  Q
    ||||| | || ||||||||||| | ||||||||| ||||    
T  49924396 tcaaacaaatcatcttttccaatgtaaaattaaatgcaa 49924434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 468
Target Start/End: Complemental strand, 8889927 - 8889793
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||||||  |||||||||||||||||| |||||||||| |   |||||||||||| ||| |    |||||| |||  |||| ||||||||| |    
T  8889927 tcattttctttgtccgaaattataagcaaaaaatgccaacttttaac---tttaattatgttgtttta----attatcctttttaaagaaaaattaaatg 8889835  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataa 468  Q
     |||||||||||||||| |||| | |||||||||||| ||||    
T  8889834 taaagtgcattcaattttctctctctttcattttctcaataa 8889793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 326 - 469
Target Start/End: Complemental strand, 39026492 - 39026351
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||||||  |||||  ||||||||||||||| | || || |||||||| | |||||||||    
T  39026492 ttcatttt-tttgtctcaaaatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaataaatcatattttccaatgtaaaattaaa 39026396  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||  |||||| |||||| |||  |||| |||||||| |||||    
T  39026395 tgcaagttgcatttaatttattctcctttttattttctccataat 39026351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 489
Target Start/End: Original strand, 16688115 - 16688215
Alignment:
Q  389 ttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattg 488  Q
    |||||||||  |||||||||||| |||||||||||| ||||||| |||| ||| | || | | |||||||||||| |||| |||| ||||||||||||||    
T  16688115 ttttcaaaaatttatcttttccagaggaaaattaaatgcaaagttcatttaatatgctttttctttcattttctcaataaccaacaaccaatgaaaattg 16688214  T
Q  489 t 489  Q
    |    
T  16688215 t 16688215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 441
Target Start/End: Original strand, 28017572 - 28017685
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||| ||||||| ||||||||||||| | ||||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  28017572 tcatattctttatctcaaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 28017669  T
Q  426 gcaaagtgcattcaat 441  Q
    ||||| ||||||||||    
T  28017670 gcaaattgcattcaat 28017685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 443
Target Start/End: Original strand, 36383806 - 36383957
Alignment:
Q  291 atactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttt 390  Q
    |||||| ||||||||||||||||||||        || ||||| |||||| |||| ||||||||||||| | ||||||||||  ||||  ||||||||||    
T  36383806 atactccctccgtcctaaattataagcaaagaaattttattttatttgtcacaaaatataagcaaaaaagatcaacttttatgttatt--attatgtttt 36383903  T
Q  391 ttc--aaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    |||  |||| || |||||| |||||| ||||||||| ||||| ||||||||||||    
T  36383904 ttctaaaaaaatcatcttt-ccaaagtaaaattaaatgcaaattgcattcaattt 36383957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 40935859 - 40935718
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||  |||||  |||||||| |||||| | || ||||||||||| | |||||||||     
T  40935859 tcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgtttcttcaaacaaatcatcttttccaatgtaaaattaaat 40935762  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  40935761 gcaagttgcatttaatttgttctcctttttattttctccataat 40935718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 40960720 - 40960579
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||  |||||  ||||||||||||||| | || ||||||| ||| | |||||||||     
T  40960720 tcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 40960623  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  40960622 gcaagttgcatttaatttgttctcctttttattttctccataat 40960579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 444
Target Start/End: Original strand, 9127957 - 9128073
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  ||||| |||||||||| | || ||||||| ||| | |||||||||     
T  9127957 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatattttttcaaacaaatcatctttttcaatgtaaaattaaat 9128054  T
Q  426 gcaaagtgcattcaattta 444  Q
    | ||| |||||||||||||    
T  9128055 gtaaattgcattcaattta 9128073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 15285718 - 15285833
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||| ||||||   |||  |||||||||||||||| | || ||||||| ||| | |||||||||     
T  15285718 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgccatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 15285815  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||| ||||||||||||    
T  15285816 gcaaattgcattcaattt 15285833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 18852137 - 18852252
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| |||||||| |||| ||| ||||||||   |||  |||||||||||||||| | ||||| |||||||| | |||||||||     
T  18852137 tcatattctttgtctcaaaatataagcataaaagacctacttttatgtcatt--attatgttttttcaaacaaattattttttccaatgtaaaattaaat 18852234  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||| ||||||||||||    
T  18852235 gcaaattgcattcaattt 18852252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 424
Target Start/End: Complemental strand, 45358120 - 45358026
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||  |||||  ||||||| ||||||| | || ||||||||||| | |||||||||    
T  45358120 attttctttgtctcaaaatataagcaaaaaaaaccaacttttatgctattt--ttatgttatttcaaacaaatcatcttttccaatgtaaaattaaa 45358026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 469
Target Start/End: Complemental strand, 28916753 - 28916620
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtg 433  Q
    ||||||||||| |||||| |||||| || |||||||||  ||||  |||||||||||||||| | || |||||||||||   ||||||||| ||||| ||    
T  28916753 tttgtctcaaaatataagtaaaaaagacaaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatataaaattaaatgcaaattg 28916656  T
Q  434 cattcaatttactctatttttcattttctctataat 469  Q
    ||||||||||  |||  |||| |||||||| |||||    
T  28916655 cattcaatttgttcttctttttattttctccataat 28916620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 489
Target Start/End: Complemental strand, 52841691 - 52841527
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaa-aataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaagga-aaattaaa 424  Q
    ||||||||||| | |||||||||||| |||| || | |||||||||| ||||||||||||||| ||||||||  |||||||||   || || |||||||     
T  52841691 tcattttctttatttcaaattataagaaaaataagatcaacttttattatatttaattatgttatttcaaaaatttatctttttttaaagagaaattaag 52841592  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
     ||||| |||| ||| ||| ||||   |||||||||| ||||||  ||  |||||||||||||||    
T  52841591 tgcaaattgcaatcattttgctcttcctttcattttccctataactaataaccaatgaaaattgt 52841527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 6787254 - 6787168
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaa 413  Q
    ||||||||||| || |||| ||||||||||||| || |||||||||| ||||||||  |||||||| |||| | |||||||| ||||    
T  6787254 tcattttctttatcccaaaatataagcaaaaaagacaaacttttatcctatttaatattgttttttaaaaaaaatatctttttcaaa 6787168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 7468216 - 7468150
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttc 393  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||  |||||||||    
T  7468216 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttttc 7468150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 403
Target Start/End: Complemental strand, 25185571 - 25185497
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattat 403  Q
    |||||||||||| ||||||||||  |||||  | ||||||||||||||||||| |||||||| |||||| |||||    
T  25185571 attttctttgtcccaaattataataaaaaacaaacaacttttatcatatttaaatatgttttctcaaaaaattat 25185497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 28017007 - 28016937
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||  |||||||| ||||    
T  28017007 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttttaaaaa 28016937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 339 - 489
Target Start/End: Complemental strand, 39151383 - 39151242
Alignment:
Q  339 tctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattc 438  Q
    ||||||||||||| ||||||| |||||| |||||||||| ||||||| || ||| | || |||||||         |||||||||| | |||||||||||    
T  39151383 tctcaaattataaacaaaaaagaccaacctttatcatatctaattatattgttttataaaattatct---------gaaaattaaatgtaaagtgcattc 39151293  T
Q  439 aatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||| || ||| ||||||||| || ||||  ||  |||||||||||||||    
T  39151292 aatttgctttatctttcattttatcaataactaataaccaatgaaaattgt 39151242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 43656282 - 43656168
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| |||||| |||||| | ||||||||||   |||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  43656282 tcatattctttgtctcaaaatataaggaaaaaa-atcaacttttatgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 43656186  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||| ||||||||||||    
T  43656185 gcaaattgcattcaattt 43656168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 6786735 - 6786820
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||| | ||||||  |||||||| |||| | | ||||||||||    
T  6786735 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctctttaatcttgtttttttaaaaaaatctcttttccaa 6786820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 489
Target Start/End: Original strand, 50176448 - 50176601
Alignment:
Q  347 tataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttac- 445  Q
    ||||||||||||  |  |||||||||||| |||||||||||| | |||||| || | ||||| ||||| |||||||||  ||||||||||||||||| |     
T  50176448 tataagcaaaaaggattaacttttatcatgtttaattatgttgtatcaaaaaataa-ctttttcaaagcaaaattaaatacaaagtgcattcaatttgcc 50176546  T
Q  446 -----------tctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
               | | ||||||||||||||||||||||||||||||| ||||||||    
T  50176547 ctttttttttttttttttttcattttctctataatcaactaccaataaaaattgt 50176601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 15959903 - 15959833
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||||||| |||| ||||||||||||| || || ||||||| ||||||||  |||||||| ||||    
T  15959903 tcattttctttgtcccaaaatataagcaaaaaagacaaatttttatcttatttaatcttgtttttttaaaa 15959833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 467
Target Start/End: Original strand, 26479653 - 26479792
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||| ||||||| ||||||||||||   |||  ||||| |||||||||| | || ||||||||||| | |||||| ||     
T  26479653 tcatattctttgtctcaaaatataaacaaaaaaaaccaacttttatgccatt--attatattttttcaaacaaatcatcttttccaatgtaaaattcaat 26479750  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctata 467  Q
    | ||| |||||||||| |  |||  |||| ||||||||||||    
T  26479751 gaaaattgcattcaatatgttctcctttttattttctctata 26479792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 3076192 - 3076257
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||||||||||| ||||| | ||||| || |||||||||  ||||||||| |||||||    
T  3076192 ttcattttctttgtctcaaaatataatccaaaaaaacaaacttttattctatttaattttgttttt 3076257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 35189119 - 35189177
Alignment:
Q  332 ttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt 392  Q
    |||||||||||||| ||||||||||||| ||||||||||||  ||||  ||||||||||||    
T  35189119 ttctttgtctcaaaatataagcaaaaaagaccaacttttatggtatt--attatgtttttt 35189177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 443
Target Start/End: Complemental strand, 37192980 - 37192880
Alignment:
Q  342 caaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaat 441  Q
    ||||||||||| |||||| | ||||| || || |||||||||||||| |||  ||| ||||||||||||||||  |||||| | |||||  |||||||||    
T  37192980 caaattataagaaaaaaacatcaactgtt-tcttatttaattatgttgtttataaaaattatcttttccaaagtgaaattatatgcaaacggcattcaat 37192882  T
Q  442 tt 443  Q
    ||    
T  37192881 tt 37192880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 43667531 - 43667486
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||    
T  43667531 cattttctttgtctcaaaatataagcaaaaaagacaaacttttatc 43667486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 44149095 - 44149011
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||  ||||||||  || ||||| |||| || |||||||||||    
T  44149095 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttg-tttttaaaaaaatcatcttttccaa 44149011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 6785354 - 6785418
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||||| |||| ||||||||||||| |  |||||||||| ||||||||  |||||||    
T  6785354 tcattttctttgtcacaaaatataagcaaaaaagataaacttttatcctatttaatcttgttttt 6785418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 18913582 - 18913477
Alignment:
Q  337 tgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgca 435  Q
    ||||||||| ||||||||||||||||||| ||| ||  ||| |  ||||||||||||||| | || ||||||||||| | ||||||||| ||||  ||||    
T  18913582 tgtctcaaaatataagcaaaaaataccaattttgatgctatct--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgca 18913485  T
Q  436 ttcaattt 443  Q
    || |||||    
T  18913484 tttaattt 18913477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 31970554 - 31970414
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||| ||||| |||||| |||||| | ||||||||||  |||||  |||||| |||||||| | || ||||||||||| | |||||||||     
T  31970554 tcattttctttgtatcaaaatataag-aaaaaagatcaacttttatgttattt--ttatgtcttttcaaacaaatcatcttttccaatgtaaaattaaat 31970458  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  31970457 gcaagttgcatttaatttgttctcctttttattttctccataat 31970414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 298930 - 298875
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaat 382  Q
    ||||||||||||||||||| | ||||||||||| || || ||||||| ||||||||    
T  298930 tcattttctttgtctcaaaatgtaagcaaaaaagacaaagttttatcctatttaat 298875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 33081304 - 33081234
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||| ||||||||||||||| | |||||||| || |||| | ||| ||||||||||| ||||||||    
T  33081304 ttcattttctatgtctcaaattataaac-aaaaatacaaaattttgttatacttaattatgttatttcaaaa 33081234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 397
Target Start/End: Original strand, 1820313 - 1820383
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||| ||  ||| |||||| |||||| || |||||||||| ||||||||| |||||||| ||||    
T  1820313 tcattttctttatcctaaaatataagtaaaaaagacaaacttttatcctatttaattttgtttttttaaaa 1820383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 397
Target Start/End: Original strand, 4672797 - 4672867
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||||||| |||| ||||||||||||| |  || ||||||| ||||||||  |||||||| ||||    
T  4672797 tcattttctttgtcccaaaatataagcaaaaaagataaatttttatcctatttaatcttgttttttaaaaa 4672867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 388
Target Start/End: Original strand, 42723827 - 42723887
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtt 388  Q
    |||||||||||||| |||||||||||| |||||| || ||||||| ||||||||| |||||||    
T  42723827 ttcattttctttgtttcaaattataaggaaaaaa-acaaactttt-tcatatttatttatgtt 42723887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 12449198 - 12449153
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  12449198 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 12449153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 28120910 - 28120837
Alignment:
Q  416 aaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || ||||||||   ||||||||||||||    
T  28120910 aaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattgt 28120837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 32624237 - 32624192
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  32624237 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 32624192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 39555817 - 39555772
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  39555817 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 39555772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 46542879 - 46542944
Alignment:
Q  327 tcattttctttgtctcaaattataagc-aaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||||| |||| ||||||| |||||| || ||||||| || ||||||||| |||||||    
T  46542879 tcattttctttgtcccaaaatataagcaaaaaaagacaaacttttctcctatttaattttgttttt 46542944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 469
Target Start/End: Original strand, 47996888 - 47997009
Alignment:
Q  347 tataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttac 445  Q
    ||||||||||||| | ||| ||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||  |||| || |||||||||      
T  47996888 tataagcaaaaaagatcaatttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatacaaattgtattcaatttgt 47996985  T
Q  446 tctatttttcattttctctataat 469  Q
    |||  |||| |||||||| |||||    
T  47996986 tctcctttttattttctccataat 47997009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 288 - 489
Target Start/End: Original strand, 3046 - 3247
Alignment:
Q  288 aatatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgt 387  Q
    ||||||||| ||||||||||||||||||||        | |||||||||| ||  ||||||||||||||||| | |||||||||||||||||||||||||    
T  3046 aatatactccctccgtcctaaattataagcaaaaaaaatccattttctttatcctaaattataagcaaaaaagatcaacttttatcatatttaattatgt 3145  T
Q  388 tttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    |||||||||| |||||||||||||||| ||||||| | ||||||||||||||||||  | | |||||||||||||||||||||||||||||||| |||||    
T  3146 tttttcaaaaaattatcttttccaaagcaaaattatatgcaaagtgcattcaatttgttttctttttcattttctctataatcaactaccaatggaaatt 3245  T
Q  488 gt 489  Q
    ||    
T  3246 gt 3247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 327 - 486
Target Start/End: Complemental strand, 16153589 - 16153430
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||| |||||| ||||| |||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||      
T  16153589 tcattttgtttgtcccaaatgataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaata 16153490  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaat 486  Q
    ||||||||||| ||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  16153489 caaagtgcatttaatttgctctctttttcactttctctataatcaactaccaatgaaaat 16153430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 329 - 489
Target Start/End: Original strand, 8959559 - 8959719
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    ||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |    
T  8959559 attttctttatcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaagaaaaattaaatgta 8959658  T
Q  429 aagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||| |||||||| |||| |||| ||||||||||||||||||||| |||||||||||||    
T  8959659 aagtgcgttcaatttgctctcttttccattttctctataatcaactatcaatgaaaattgt 8959719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 28906985 - 28907148
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||| |||||||||| |||  |||||||||| |    
T  28906985 tcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaaaaattatctttttcaatagaaaattaaatg 28907084  T
Q  427 caaagtgcattcaatttactct-atttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||  |||  |||||||||||||||| |||||||||||||| ||||||||    
T  28907085 caaagtgcattcaatttgttctcttttttcattttctctagaatcaactaccaataaaaattgt 28907148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 28943380 - 28943543
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||| |||||||||| |||  |||||||||| |    
T  28943380 tcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaaaaattatctttttcaatagaaaattaaatg 28943479  T
Q  427 caaagtgcattcaatttactct-atttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||||  |||  |||||||||||||||| |||||||||||||| ||||||||    
T  28943480 caaagtgcattcaatttgttctcttttttcattttctctagaatcaactaccaataaaaattgt 28943543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 329 - 489
Target Start/End: Complemental strand, 1144738 - 1144573
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    ||||| ||||||  ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||||||||| |||    
T  1144738 attttttttgtcctaaattataagcaaaaaagaccaacttttatcatatttaataatgttttt-caaaaaattatcttttccaaagaaaaattaaatgca 1144640  T
Q  429 aagtgcattcaatttactctat------ttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||| || | |      |||||||||||||||||||||||||||||||||||||||    
T  1144639 aagtgcattcaatttgcttttttttttcttttcattttctctataatcaactaccaatgaaaattgt 1144573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 329 - 487
Target Start/End: Complemental strand, 29307431 - 29307271
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||  |||| ||||| |||||||||||||||||||| |||    
T  29307431 attttctttgtttcaaattataagcaaaaaagactaacttttatcatatttaattatgtttttctaaaaaattat-ttttccaaaggaaaattaaatgca 29307333  T
Q  429 aagtgcattcaatttac---tctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    ||||||||||||||| |   | | ||||| |||||||||| |||||||||||||||||||||    
T  29307332 aagtgcattcaatttgctttttttttttttattttctctacaatcaactaccaatgaaaatt 29307271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 345 - 489
Target Start/End: Complemental strand, 3464042 - 3463897
Alignment:
Q  345 attataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaaga-ttatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| |||| | |||| ||||||||   ||||||||| ||||||||||||||||||    
T  3464042 attataagcaaaaaagatcaacttttatcatatttaattatgtttttttaaaaaaattattttttccaagaaaaaattaaatgcaaagtgcattcaattt 3463943  T
Q  444 actctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
     |||| ||||||||||||||||||||||||||||||| ||||||||    
T  3463942 gctctctttttcattttctctataatcaactaccaataaaaattgt 3463897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 327 - 468
Target Start/End: Original strand, 8506354 - 8506495
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||| || ||||||||||| |||||| | |||||||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||| |    
T  8506354 tcattttctttctcccaaattataagtaaaaaagatcaacttttgtcatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaattaaatg 8506453  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataa 468  Q
    ||||||||||||||||| |||||| |||||||||||| ||||    
T  8506454 caaagtgcattcaatttgctctatctttcattttctcaataa 8506495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 343 - 489
Target Start/End: Complemental strand, 10154156 - 10154010
Alignment:
Q  343 aaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatt 442  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||| |||||||||||||||||    
T  10154156 aaattataagcaaaaaagacaaacttttatcatatttaattatgttgtttcaaaaaattatctcttccaaagaaaaattaaatgcaaagtgcattcaatt 10154057  T
Q  443 tactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    | || | | |||||||||||| || | |||  |||||||||||||||    
T  10154056 tgctatctctttcattttctcaatgaccaataaccaatgaaaattgt 10154010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 489
Target Start/End: Complemental strand, 5659767 - 5659602
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaat-accaacttttatcatatttaattatgt--tttttcaaaagattatcttttccaaaggaaaattaaa 424  Q
    |||||||||| ||  |||||||||||||||||  | ||||||||||||||||||||||| |  ||||| ||||  ||||||| |||||||||||||||||    
T  5659767 cattttctttatcctaaattataagcaaaaaaagatcaacttttatcatatttaattatatatttttttaaaaagttatcttctccaaaggaaaattaaa 5659668  T
Q  425 agcaaagtgcattcaatttactct-atttttcattttctctataatcaactaccaatgaaaattgt 489  Q
     | |||||||||||||||| || |  ||||||||||| ||||||||||||||||||| ||||||||    
T  5659667 tgtaaagtgcattcaatttgctttcttttttcattttttctataatcaactaccaataaaaattgt 5659602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 326 - 489
Target Start/End: Complemental strand, 12912538 - 12912376
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||||||||||  |||||| || | |||||||||| ||||||||| || |||||||| ||||| |||| ||||| |||||||||     
T  12912538 ttcattttctttgtctcaaattataaa-aaaaaagactagcttttatcatgtttaattatattgtttcaaaaaattatatttttcaaagaaaaattaaat 12912440  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||| ||||| |||| | ||||||||| || | || |||  |||||||||||||||    
T  12912439 gcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgt 12912376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 336 - 468
Target Start/End: Original strand, 6391795 - 6391927
Alignment:
Q  336 ttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgca 435  Q
    ||||| |||||||||||||||||| || ||||||||||||| ||||||||||| |||||||| ||||||||||||||||  |||||||  ||||| ||||    
T  6391795 ttgtcccaaattataagcaaaaaagactaacttttatcataattaattatgttatttcaaaaaattatcttttccaaagagaaattaattgcaaattgca 6391894  T
Q  436 ttcaatttactctatttttcattttctctataa 468  Q
    || | | |||| | | |||||||||||||||||    
T  6391895 tttattatactttctctttcattttctctataa 6391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 35275468 - 35275353
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| || ||||||| ||||   |||||||| |    
T  35275468 tcattttctttgtcccaaattatagg-aaaaaataccaaattttatcatatttaattatgttttttcaaaaaatcatctttttcaaaaagaaattaaatg 35275370  T
Q  427 caaagtgcattcaattt 443  Q
    |||| | ||||||||||    
T  35275369 caaactacattcaattt 35275353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 8146256 - 8146115
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||| ||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  8146256 tcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 8146159  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  ||| ||||| |||||||| |||||    
T  8146158 gcaaattgcattcaatttgttctcttttttattttctccataat 8146115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 443
Target Start/End: Original strand, 24439452 - 24439603
Alignment:
Q  291 atactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttt 390  Q
    |||||||||||||||||||||||||||        ||||||||||||||| |||| ||||||||||||| | ||||||||||  ||||  ||||||||||    
T  24439452 atactctctccgtcctaaattataagcaaaaaaatttcattttctttgtcgcaaaatataagcaaaaaagatcaacttttatgttatt--attatgtttt 24439549  T
Q  391 ttca--aaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    ||||  ||| || ||| ||||||||| ||||||||| ||||| ||||||||||||    
T  24439550 ttcaacaaaaatcatc-tttccaaagtaaaattaaatgcaaattgcattcaattt 24439603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 326 - 469
Target Start/End: Original strand, 20914774 - 20914916
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||  |||||  ||||||||||||||| | || ||||||||||| | |||||||||    
T  20914774 ttcattttctttgtcttaaaatataagcaaaaaataccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 20914871  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  20914872 tgcaagttgcatttaatttgttctcctttttattttctccataat 20914916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 389 - 489
Target Start/End: Complemental strand, 5369213 - 5369113
Alignment:
Q  389 ttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattg 488  Q
    |||||||||  ||||||||| ||||||||||||||| ||||||||||||||||   | || | |||||||||||| |||| |||| ||||||||||||||    
T  5369213 ttttcaaaaacttatctttttcaaaggaaaattaaatgcaaagtgcattcaataagccctctctttcattttctcaataaccaacaaccaatgaaaattg 5369114  T
Q  489 t 489  Q
    |    
T  5369113 t 5369113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 469
Target Start/End: Complemental strand, 31690855 - 31690722
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtg 433  Q
    ||||||||||| ||||| ||||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||||||| | ||||||||| ||||| ||    
T  31690855 tttgtctcaaaatataaacaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattg 31690758  T
Q  434 cattcaatttactctatttttcattttctctataat 469  Q
    ||||||||||  |||  |||| |||||||| |||||    
T  31690757 cattcaatttgttctcctttttattttctccataat 31690722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 469
Target Start/End: Complemental strand, 30086786 - 30086650
Alignment:
Q  332 ttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaa 430  Q
    |||||||||||||| |||||| |||||| ||||||||||||   |||  |||||||||||||||| | || ||||||||||| | |||||||||  ||||    
T  30086786 ttctttgtctcaaaatataagtaaaaaagaccaacttttatgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatacaaa 30086689  T
Q  431 gtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||||||||||| |||  |||| |||||||| |||||    
T  30086688 ttgcattcaatttattctcctttttattttctccataat 30086650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 444
Target Start/End: Complemental strand, 35462961 - 35462845
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | |  ||||||| ||| | |||||||||     
T  35462961 tcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaaacatctttttcaatgtaaaattaaat 35462864  T
Q  426 gcaaagtgcattcaattta 444  Q
    ||||| | |||||||||||    
T  35462863 gcaaatttcattcaattta 35462845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 429
Target Start/End: Complemental strand, 25962695 - 25962594
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||  |||||  ||||||||||||||| | || ||||||| ||| | |||||||||     
T  25962695 tcattttctttgtctcaaaatataagcaaaaaatacaaacttttatgctattt--ttatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 25962598  T
Q  426 gcaa 429  Q
    ||||    
T  25962597 gcaa 25962594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 8225360 - 8225431
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||||||| |||| ||||||||||||| || |||||||||||||||||||  |||||||| ||||    
T  8225360 ttcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcatatttaatcttgttttttaaaaa 8225431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 290 - 443
Target Start/End: Original strand, 13146608 - 13146760
Alignment:
Q  290 tatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttt 389  Q
    ||||||| |||||||||||| |||||||         |||| |||||||| ||||| ||||| ||||||| ||||||||||||  ||||  |||||||||    
T  13146608 tatactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtatcaaaatataaacaaaaaagaccaacttttatgctatt--attatgttt 13146705  T
Q  390 tttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    ||||||| | || ||||||||||| | ||||||||| | ||| ||||||||||||    
T  13146706 tttcaaacaaatcatcttttccaatgtaaaattaaatgtaaattgcattcaattt 13146760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 42273547 - 42273632
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||  |||||||  |||| || |||||||||||    
T  42273547 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttaaaaaaaatcatcttttccaa 42273632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 443
Target Start/End: Complemental strand, 24432637 - 24432528
Alignment:
Q  333 tctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaag 431  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||  |||| |||||||||| | || ||||||||||| | ||||||||| ||||      
T  24432637 tctttgtctcaaaatataagcaaaaaaaaccaacttttatactattt--ttatattttttcaaataaatcatcttttccaatgtaaaattaaatgcaagt 24432540  T
Q  432 tgcattcaattt 443  Q
    |||||| |||||    
T  24432539 tgcatttaattt 24432528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 32079422 - 32079538
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||  |||||||||||||||||| |  ||||||| ||||| ||||||||||| ||||||||  |  ||||||| |||   |||||||| |    
T  32079422 tcattttctttgttccaaattataagcaaaaaagataaacttttgtcatacttaattatgttatttcaaaaactcgtcttttctaaactgaaattaaatg 32079521  T
Q  427 caaagtgcattcaattt 443  Q
    |||| |||||| |||||    
T  32079522 caaattgcatttaattt 32079538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 489
Target Start/End: Complemental strand, 3103569 - 3103410
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||| | |||| |||||||||||  ||||||| | ||||||||||||||||||||||||  |||||||| ||||| ||||  ||||  |||||||| |    
T  3103569 tcatttccattgtttcaaattataaaaaaaaaat-ctaacttttatcatatttaattatgtcatttcaaaaaattatattttttaaagagaaattaaatg 3103471  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
     ||| |||||||| ||| | ||   ||||||||  |||||||| ||  |||||||||||||||    
T  3103470 taaattgcattcattttgccctccctttcattt--tctataattaataaccaatgaaaattgt 3103410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 489
Target Start/End: Complemental strand, 5736429 - 5736322
Alignment:
Q  382 ttatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatg 481  Q
    ||||||| |||||||| || ||  |||  |||||||||||||| ||||| ||| |||||||| ||||   ||||||||||||| |||||||| || ||||    
T  5736429 ttatgttatttcaaaaaatcatactttttaaaggaaaattaaatgcaaaatgcgttcaatttgctctccctttcattttctctgtaatcaacgacaaatg 5736330  T
Q  482 aaaattgt 489  Q
    ||||||||    
T  5736329 aaaattgt 5736322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 291 - 443
Target Start/End: Complemental strand, 8541842 - 8541692
Alignment:
Q  291 atactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttt 390  Q
    ||||||||||||||||||| |||||||         ||||||| ||||||| ||| |||||  |||||| ||||||||||||  ||||  ||||||||||    
T  8541842 atactctctccgtcctaaaatataagcaaaaatatctcatttt-tttgtcttaaaatataacaaaaaaagaccaacttttatgttatt--attatgtttt 8541746  T
Q  391 ttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    |||||| | || ||||||||||| | ||||||||| ||||| |||||| |||||    
T  8541745 ttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattaaattt 8541692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 443
Target Start/End: Complemental strand, 37066501 - 37066351
Alignment:
Q  292 tactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    ||||| |||||||||||| |||||||        ||||| |||||||||| ||| ||||||||||||| || || |||| |  ||||  ||||| |||||    
T  37066501 tactccctccgtcctaaaatataagcaaaaaaatttcatattctttgtcttaaaatataagcaaaaaagactaatttttttgctatt--attatattttt 37066404  T
Q  392 tcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    ||||| | || ||||||||||| | ||||||||| ||||| ||||||||||||    
T  37066403 tcaaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaattt 37066351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 429
Target Start/End: Complemental strand, 16286326 - 16286225
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| |||||| |||||| || |||||||||   ||||  ||||||||||||||| | |||||||||| ||| | |||||||||     
T  16286326 tcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgcaattt--ttatgttttttcaaacaaattatctttttcaatgtaaaattaaat 16286229  T
Q  426 gcaa 429  Q
    ||||    
T  16286228 gcaa 16286225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 25840762 - 25840846
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    ||||||||||||| |||| ||||||||||||  || |||||||||  ||||||||  |||||||| |||| || |||||||||||    
T  25840762 cattttctttgtcccaaaatataagcaaaaatgacaaacttttattctatttaatcttgttttttaaaaaaatcatcttttccaa 25840846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 42364955 - 42365092
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||        |||||||||| | || ||||||||||| | |||||||||     
T  42364955 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt------gtttttttcaaacaaatcatcttttccaatgtaaaattaaat 42365048  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  42365049 gcaaattgcattcaatttgttctcctttttattttctccataat 42365092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 9957679 - 9957624
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaat 382  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||    
T  9957679 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaat 9957624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 12793070 - 12793016
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaa 381  Q
    |||||||||||||  |||| |||||||||||||||| |||||||||| |||||||    
T  12793070 tcattttctttgttccaaaatataagcaaaaaatacaaacttttatcctatttaa 12793016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 397
Target Start/End: Original strand, 20643912 - 20643982
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||| || |||| ||||||||||||| || |||||||||| ||||||||  |||||||| ||||    
T  20643912 tcattttctttatcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaa 20643982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 397
Target Start/End: Original strand, 34425228 - 34425298
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||||||  ||| ||||||||||||| || ||||||||||  |||||||| |||||||| ||||    
T  34425228 tcattttctttgtcctaaaatataagcaaaaaagacaaacttttatcccatttaattttgtttttttaaaa 34425298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 471
Target Start/End: Original strand, 8143851 - 8143993
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaag 426  Q
    |||||| |||||| || | ||||||||||||| | ||||||||||  ||||  |||||||||||||||| | ||  |||||| ||||| |||||||||      
T  8143851 cattttttttgtcccataatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaataaatcttctttttcaaagtaaaattaaata 8143948  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatca 471  Q
     ||| ||||||||||||  ||||  ||| |||||||| |||||||    
T  8143949 taaattgcattcaatttgttctacattttattttctccataatca 8143993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 469
Target Start/End: Original strand, 12638818 - 12638946
Alignment:
Q  339 tctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcatt 437  Q
    ||||||| |||||| |||||| || |||||||||  ||||  |||||||||||||||| | ||||| |||| ||| | ||||||||| ||||| ||||||    
T  12638818 tctcaaaatataag-aaaaaagactaacttttatgctatt--attatgttttttcaaacaaattatttttttcaatgtaaaattaaatgcaaattgcatt 12638914  T
Q  438 caatttactctatttttcattttctctataat 469  Q
    ||||||  |||  |||| |||||||| |||||    
T  12638915 caatttgttcttctttttattttctccataat 12638946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 39505496 - 39505440
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaat 382  Q
    ||||||||||||||| |||| ||||||||||||| || |||||||||  ||||||||    
T  39505496 ttcattttctttgtcccaaaatataagcaaaaaagacaaacttttattttatttaat 39505440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 12730250 - 12730196
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaa 381  Q
    |||||||||||||| |||| |||||| |||||| || |||||||||| |||||||    
T  12730250 tcattttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatttaa 12730196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 489
Target Start/End: Original strand, 38280853 - 38280926
Alignment:
Q  416 aaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||| ||||| |  ||||||||| |||| | ||||||||| || ||||||||  |||||||||||||||    
T  38280853 aaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgt 38280926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 43590193 - 43590148
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||  |||| |||||||||||||||| ||||||||||    
T  43590193 cattttctttgtaccaaaatataagcaaaaaatacaaacttttatc 43590148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 17351278 - 17351334
Alignment:
Q  327 tcattttctttgtctcaaa-ttataagcaaaaaataccaacttttatcatatttaat 382  Q
    |||||||||||||| |||| || ||||||||||| || |||||||||| ||||||||    
T  17351278 tcattttctttgtcccaaaattgtaagcaaaaaagacaaacttttatcctatttaat 17351334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 3e-55; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 327 - 488
Target Start/End: Original strand, 17314745 - 17314906
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||  |||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||||      
T  17314745 tcattttctttgttccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaaaacttatcttttctaaaagaaaattaaatc 17314844  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattg 488  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  17314845 caaagtgcattcaatttgctctccttttcattttctctataatcaactaccaatgaaaattg 17314906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 328 - 489
Target Start/End: Original strand, 8673298 - 8673458
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||  |||   ||||| |||| |||||||||||||||||||||||||| ||    
T  8673298 cattttctttgtcccaaattataagcaaaaaagaccaacttttatcatattt-tttagtgtttttaaaaaaattatcttttccaaaggaaaattaaatgc 8673396  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  8673397 aaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgt 8673458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 362 - 489
Target Start/End: Complemental strand, 41362517 - 41362390
Alignment:
Q  362 ccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttc 461  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| |||  ||||||||||||    
T  41362517 ccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatgcaaagtgcatttaatttgctcactttttcattttc 41362418  T
Q  462 tctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||||||||||||||||    
T  41362417 tctataatcaactaccaatgaaaattgt 41362390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 342 - 489
Target Start/End: Complemental strand, 25195277 - 25195129
Alignment:
Q  342 caaattataagcaaaaaata-ccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaa 440  Q
    ||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||||| |||||||||||||||    
T  25195277 caaattataagcaaaaaaaggccaacttctatcatatttaattatgttttttcaaaaacttatcttttccaaagaaaaattaaatgcaaagtgcattcaa 25195178  T
Q  441 tttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||| |||| |||||||||||||||||||||||| |||||||||||||||    
T  25195177 tttgctctctttttcattttctctataatcaaccaccaatgaaaattgt 25195129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 329 - 487
Target Start/End: Complemental strand, 41791702 - 41791545
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    ||||||||||||  ||||||||||||||| | || |||||||||||||||||||||| ||||||||||| || |||||||||||| |||||||||| | |    
T  41791702 attttctttgtcctaaattataagcaaaacaaac-aacttttatcatatttaattatcttttttcaaaaaatcatcttttccaaaagaaaattaaatgta 41791604  T
Q  429 aagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    || |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||    
T  41791603 aaatgcattcaatttgctctcttttttattttctctataatcaactaccaatgaaaatt 41791545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 17713138 - 17713300
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| || |||||| | |||||||||||||||||||||||||| |    
T  17713138 tcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattgtttcaacaaattatcttttccaaaggaaaattaaatg 17713237  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||| | |||| | || |||||| || |||| |||  |||||||||||||||    
T  17713238 caaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgt 17713300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 489
Target Start/End: Complemental strand, 26954636 - 26954475
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| | |||||| |||||||| ||||||||||||||| |||||||||| ||    
T  26954636 cattttctttgtcccaaattataagtaaaaaagaccaaattttatcatattttactatgttgtttcaaaaaattatcttttccaaaagaaaattaaatgc 26954537  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||| ||| || | | |||||||||||| |||| |||| |||||||||||||||    
T  26954536 aaagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgt 26954475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 329 - 487
Target Start/End: Complemental strand, 2628407 - 2628249
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    |||||| ||||| ||||||||||| |||||| ||||||||||||||||||||||||| || |||||||| |||||||||| |||||||||||| || |||    
T  2628407 attttccttgtcccaaattataagaaaaaaacaccaacttttatcatatttaattatattgtttcaaaaaattatctttttcaaaggaaaatttaatgca 2628308  T
Q  429 aagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    ||||| ||||||||| |||| | |||||||||||| |||| |||  |||||||||||||    
T  2628307 aagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaatt 2628249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 330 - 460
Target Start/End: Complemental strand, 28497755 - 28497625
Alignment:
Q  330 ttttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaa 429  Q
    |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||     
T  28497755 ttttttttgtcccaaattataagcaaaatataccaacttttatcatatttaattatgttatttcaaaaaattatcttttccaaaggaaaattaaatgcat 28497656  T
Q  430 agtgcattcaatttactctatttttcatttt 460  Q
    |||||||||||||| |||  | |||||||||    
T  28497655 agtgcattcaatttgctccttgtttcatttt 28497625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 383 - 489
Target Start/End: Original strand, 17336713 - 17336819
Alignment:
Q  383 tatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatga 482  Q
    ||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||  ||||||||| ||||||||||||||||||||||    
T  17336713 tatgttttttcaaaaaattatcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatga 17336812  T
Q  483 aaattgt 489  Q
    |||||||    
T  17336813 aaattgt 17336819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 5217307 - 5217469
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||| |||| |  |||||||| |    
T  5217307 tcattttctttgtaccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaacatcatctttcccaaggagaaattaaatg 5217406  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||  |||||||| | | || | | |||||||||||||||||  ||  |||||| ||||||||    
T  5217407 caatttgcattcattatgctttctctttcattttctctataactaataaccaataaaaattgt 5217469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 327 - 489
Target Start/End: Original strand, 8745500 - 8745660
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||||||||  ||||||||||| |||||||  |||||| ||||||||||||||||||| |||||||| || ||||||| |||| |||||||||| |    
T  8745500 tcattttctttgttgcaaattataagaaaaaaat--caacttctatcatatttaattatgttatttcaaaaaatcatctttttcaaaagaaaattaaatg 8745597  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||| |   || ||||| ||||   ||| ||||| |||||||||||| |||||||||||||||    
T  8745598 caaactatttttaatttgctctcccttttattttttctataatcaacaaccaatgaaaattgt 8745660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 329 - 489
Target Start/End: Complemental strand, 4039125 - 4038964
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttc-aaaagattatcttttccaaaggaaaattaaaagc 427  Q
    |||||||||||| || |||||||  |||||| || |||||||||||||||||||||||||||||  |||| |  |     | ||| | ||||||||| |     
T  4039125 attttctttgtcccatattataaaaaaaaaaaactaacttttatcatatttaattatgttttttttaaaaaaaaaaaaaattcaaggaaaaattaaatgt 4039026  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  4039025 aaagtgcattcaatttgctctctttttcattttctctataatcaactacaaatgaaaattgt 4038964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 338 - 468
Target Start/End: Original strand, 27819585 - 27819715
Alignment:
Q  338 gtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcatt 437  Q
    |||| ||||||||||||||||| |  |||||||||||||||||||| |||| |||||||| || ||||||| ||||||||||||||| ||||| | ||||    
T  27819585 gtcttaaattataagcaaaaaagataaacttttatcatatttaattttgttatttcaaaaaatcatctttttcaaaggaaaattaaatgcaaactacatt 27819684  T
Q  438 caatttactctatttttcattttctctataa 468  Q
     ||||| ||||   ||| |||||||||||||    
T  27819685 taatttgctctcccttttattttctctataa 27819715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 418 - 489
Target Start/End: Original strand, 38072169 - 38072240
Alignment:
Q  418 aattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||  ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  38072169 aattaaatacaaagtgcattcaatttgctctttttttcattttctctataatcaactaccaatgaaaattgt 38072240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 469
Target Start/End: Complemental strand, 25321828 - 25321689
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||  |||||  ||||||||||||||| | || ||||||||||| | ||||||||| ||    
T  25321828 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 25321731  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||  |||||| ||||| ||||  |||| |||||||| |||||    
T  25321730 aagttgcatttaatttgctctcctttttattttctccataat 25321689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 24612724 - 24612583
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||| ||| | |||||||||     
T  24612724 tcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 24612627  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  ||||||||||||  |||  |||| |||||||| |||||    
T  24612626 gcaagttgcattcaatttgttctcctttttattttctccataat 24612583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 35259974 - 35260115
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  35259974 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 35260071  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| | ||||||||||  |||  |||| |||||||| |||||    
T  35260072 gcaaattccattcaatttgttctcctttttattttctccataat 35260115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 468
Target Start/End: Complemental strand, 14576387 - 14576249
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||||| ||  |||||||||  |||||| | |||||||||||||||||||||||||| |||||||| |  |     ||||||| ||||||||| |    
T  14576387 tcattttctttatcctaaattataataaaaaaagatcaacttttatcatatttaattatgttgtttcaaaaaaaaa---aatccaaagaaaaattaaatg 14576291  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataa 468  Q
    ||||||||||||||||| |||| | |||||||||||| ||||    
T  14576290 caaagtgcattcaatttgctctctctttcattttctcaataa 14576249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 11043974 - 11044089
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || || |||||||| | |||||||||     
T  11043974 tcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaataaatcatattttccaatgtaaaattaaat 11044071  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||  ||||||||||||    
T  11044072 gcaagttgcattcaattt 11044089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 367 - 489
Target Start/End: Complemental strand, 29147442 - 29147320
Alignment:
Q  367 ttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctat 466  Q
    |||||||| ||||||||||||| |||||||| || || ||||   ||||||||||||| ||||| |||||| |||||  |||   |||||||||||||||    
T  29147442 ttttatcacatttaattatgttatttcaaaaaatcatatttttttaaggaaaattaaatgcaaactgcatttaatttgatctccatttcattttctctat 29147343  T
Q  467 aatcaactaccaatgaaaattgt 489  Q
    ||||||| || ||||||||||||    
T  29147342 aatcaacaactaatgaaaattgt 29147320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 463
Target Start/End: Original strand, 36537975 - 36538110
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||  |||||  ||||||||||||||| | || ||||||||||| | |||||||||     
T  36537975 tcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 36538072  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctc 463  Q
    ||||  |||||| |||||| |||  |||| ||||||||    
T  36538073 gcaatttgcatttaatttattctcctttttattttctc 36538110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 44052537 - 44052679
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatg-ttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||  ||||  |||||| |||||||||| | || ||||||||||| | |||||||||    
T  44052537 tcattttctttatctcaaaatataagcaaaaaaaaccaacttttatgttatt--attatgtttttttcaaacaaatcatcttttccaatgtaaaattaaa 44052634  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  44052635 tgcaaattgcattcaatttgttctcctttttattttctccataat 44052679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 27621047 - 27621188
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||  ||||||||||||| || |||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  27621047 tcatattctttgtctcaatatataagcaaaaaagacaaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 27621144  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  27621145 gcaaattgcattcaatttgttctcctttttattttctccataat 27621188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 27752503 - 27752644
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||||  |||||  ||||||||||||||| | || ||||||||||| | |||||||||     
T  27752503 tcattttctttgtctcaaaatataaacaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 27752600  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  27752601 gcaagttgcatttaatttgttctcctttttattttctccataat 27752644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 37597987 - 37598128
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  | ||  |||||||||||||||| | || || |||||||| | |||||||||     
T  37597987 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttgtt--attatgttttttcaaacaaatcattttttccaatgtaaaattaaat 37598084  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  37598085 gcaaattgcattcaatttgttctcctttttattttctccataat 37598128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 384
Target Start/End: Original strand, 38072114 - 38072169
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaatta 384  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  38072114 attttctttgtcccaaattataagcaaaaaagaccaacttttatcatatttaatta 38072169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 443
Target Start/End: Original strand, 34899840 - 34899956
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaatacca-acttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    ||||||||| ||| ||||||  |||||||||| |||| || || |||||||||||||||||| |||||||| || |||||||| |||| ||||||||| |    
T  34899840 cattttcttcgtcccaaatttcaagcaaaaaagaccacacattaatcatatttaattatgttatttcaaaaaatcatcttttctaaagtaaaattaaatg 34899939  T
Q  427 caaagtgcattcaattt 443  Q
    | || | ||||||||||    
T  34899940 ctaatttcattcaattt 34899956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 33851267 - 33851152
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||||||||||| |||||| ||||||||||||| | ||||||||||  |||||  ||||||||||||||| | || ||||||||||| | |||||||||     
T  33851267 tcattttctttgcctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 33851170  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||  |||||| |||||    
T  33851169 gcaagttgcatttaattt 33851152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 3099869 - 3100011
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt-caaa-agattatcttttccaaaggaaaattaaa 424  Q
    ||||||||||||| ||||| ||||||||||||| || | |||||||  ||||  |||||||||||| |||| | || ||||||||||| | |||||||||    
T  3099869 tcattttctttgtttcaaaatataagcaaaaaagacaatcttttatgctatt--attatgtttttttcaaacaaatcatcttttccaatgtaaaattaaa 3099966  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  3099967 tgcaaattgcattcaatttgttctcctttttattttctccataat 3100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 12894010 - 12893922
Alignment:
Q  335 tttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaa 424  Q
    |||||| |||||||||||| ||||| || ||||||||||||||||||||||||| ||| |||| | |||||||| |||||  ||||||||    
T  12894010 tttgtcccaaattataagctaaaaaaactaacttttatcatatttaattatgttattttaaaa-aatatcttttacaaagagaaattaaa 12893922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 13144225 - 13144141
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||| ||||||| ||| |||||| |||| | ||| ||||||||    
T  13144225 tcattttctttgtctcaaaatataagcaaaaaagacaaacttttatcctatttaa-tattttttttaaaaaaaatattttttccaa 13144141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 443
Target Start/End: Original strand, 11992607 - 11992760
Alignment:
Q  290 tatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttt 389  Q
    ||||||| |||||||||||| |||||||        ||||| |||||||| | ||| ||||||||||||| ||| ||||||||  ||||  |||||||||    
T  11992607 tatactccctccgtcctaaaatataagcaaaaaaatttcatattctttgtattaaaatataagcaaaaaaaacctacttttatgctatt--attatgttt 11992704  T
Q  390 ttt-caaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    ||| |||| | || ||||||||||| | ||||||||| ||||| ||||||||||||    
T  11992705 ttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 11992760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 14693376 - 14693434
Alignment:
Q  405 ttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctc 463  Q
    |||||||||| |||||||||  ||||||||||||||||| |||| ||||||||||||||    
T  14693376 ttttccaaagaaaaattaaatacaaagtgcattcaatttgctctctttttcattttctc 14693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 34890438 - 34890368
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||  |||||||| ||||    
T  34890438 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaa 34890368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 35344283 - 35344425
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agatta-tcttttccaaaggaaaattaaa 424  Q
    |||| |||||||||||||| ||||||||||||| ||||| ||||||  ||||  |||||||||||||||| | || | | |||| ||| | |||||||||    
T  35344283 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctatt--attatgttttttcaaacaaatcattttttttcaatgtaaaattaaa 35344380  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||| |||||||||| || |||  |||| |||||||| |||||    
T  35344381 tgcaaattgcattcaatgtattctcctttttattttctccataat 35344425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 4047158 - 4047075
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttcca 411  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||  ||||||||  || ||||| |||| |||||||||||||    
T  4047158 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttg-tttttaaaaaaattatcttttcca 4047075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 32678753 - 32678612
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||| | ||| ||||||||||||| |  |||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  32678753 tcattttctttgttttaaaatataagcaaaaaagataaacttttatgttatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 32678656  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  32678655 gcaagttgcatttaatttgttcttctttttattttctccataat 32678612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 469
Target Start/End: Complemental strand, 44358715 - 44358594
Alignment:
Q  347 tataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttac 445  Q
    ||||||||||||| | ||||||||||  ||||  |||| ||||||||||| | || ||||||||||| | ||||||||| ||||| ||||||||||||      
T  44358715 tataagcaaaaaagatcaacttttatgttatt--attacgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgt 44358618  T
Q  446 tctatttttcattttctctataat 469  Q
    |||  |||| |||||||| |||||    
T  44358617 tctcctttttattttctccataat 44358594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 354 - 443
Target Start/End: Complemental strand, 37567648 - 37567560
Alignment:
Q  354 aaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    |||||||||||||||||||  ||||  |||||||||||||| | | || ||||||||||| | ||||||||| ||||| ||||||||||||    
T  37567648 aaaaaataccaacttttatgctatt--attatgttttttcagacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 37567560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 469
Target Start/End: Original strand, 39187159 - 39187291
Alignment:
Q  337 tgtctcaaattataagcaaaaaataccaa-cttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgc 434  Q
    ||||||||| ||||||||||||| | ||| |||||||  ||||  |||||||||||||||| | || ||| ||||||| | ||||||||| ||||| |||    
T  39187159 tgtctcaaaatataagcaaaaaaaaacaaacttttatgctatt--attatgttttttcaaacaaatcatcatttccaatgtaaaattaaatgcaaattgc 39187256  T
Q  435 attcaatttactctatttttcattttctctataat 469  Q
    |||||||||  |||  |||| |||||||| |||||    
T  39187257 attcaatttgttctcctttttattttctccataat 39187291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 397
Target Start/End: Original strand, 24892734 - 24892804
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    |||||||||||||  |||| ||||||||||||| || |||||||||| ||||||||  |||||||| ||||    
T  24892734 tcattttctttgttccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttttaaaaa 24892804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 371
Target Start/End: Complemental strand, 41362888 - 41362846
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaactttta 371  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  41362888 attttctttgtcccaaattataagcaaaaaagaccaactttta 41362846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 17336375 - 17336420
Alignment:
Q  339 tctcaaattataagcaaaaaataccaacttttatcatatttaatta 384  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||    
T  17336375 tctcaaattataagcaaaaaaaataaacttttatcatatttaatta 17336420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 412
Target Start/End: Original strand, 27740539 - 27740607
Alignment:
Q  343 aaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    |||||||||| |||||| |  ||||||||||||||||||||||||| ||| |||| || |||||||||||    
T  27740539 aaattataag-aaaaaagataaacttttatcatatttaattatgttgttttaaaatatcatcttttccaa 27740607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 441
Target Start/End: Complemental strand, 44411454 - 44411340
Alignment:
Q  327 tcattttctttgtctcaaattataagcaa-aaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||| |||||| ||||||| ||||||||| |||| ||||||||||||  ||||  ||||| |||||||||| | || ||||||| ||| | |||||||||    
T  44411454 tcatattctttttctcaaaatataagcaaaaaaagaccaacttttatgctatt--attatattttttcaaacaaatcatctttttcaatgtaaaattaaa 44411357  T
Q  425 agcaaagtgcattcaat 441  Q
     ||||| ||||||||||    
T  44411356 tgcaaattgcattcaat 44411340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 29920536 - 29920480
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaat 382  Q
    ||||||||||||||| | || ||||||||||||| || |||||||||| ||||||||    
T  29920536 ttcattttctttgtccctaaatataagcaaaaaacacaaacttttatcctatttaat 29920480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 441
Target Start/End: Complemental strand, 35346548 - 35346435
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| |||||  |||||| | ||||||||||  ||||  |||||||||||||||| | || ||||||| ||| | |||||| ||     
T  35346548 tcatattctttgtctcaaaatataaataaaaaagatcaacttttatgctatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattgaat 35346451  T
Q  426 gcaaagtgcattcaat 441  Q
    ||||| ||||||||||    
T  35346450 gcaaattgcattcaat 35346435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 35525494 - 35525558
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||||| |||| |||||| |||||| || |||||||||| ||||||||  |||||||    
T  35525494 tcattttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatttaatcttgttttt 35525558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 36190667 - 36190731
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||||| |||| ||||||||||||| ||  ||||||||| ||||||||  |||||||    
T  36190667 tcattttctttgtcccaaaatataagcaaaaaagacacacttttatcctatttaatcttgttttt 36190731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 392
Target Start/End: Complemental strand, 30576089 - 30576026
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttttt 392  Q
    |||||||||||| |||| ||||||||||||| || || ||||||| ||||||||  ||||||||    
T  30576089 attttctttgtcccaaaatataagcaaaaaagacaaatttttatcctatttaatcttgtttttt 30576026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 469
Target Start/End: Complemental strand, 31133219 - 31133132
Alignment:
Q  383 tatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    |||||||||||||| | || ||||||||||| | ||||||||| ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  31133219 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattttttctcctttttattttctccataat 31133132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 8107883 - 8107798
Alignment:
Q  327 tcattttctttgtctcaaattataagcaa-aaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    |||||||||||||| |||| ||||||||| |||| || || ||||||| ||||||||  |||||||| |||| | ||||||||||||    
T  8107883 tcattttctttgtcccaaaatataagcaaaaaaagacaaatttttatcttatttaatcttgtttttttaaaa-aatatcttttccaa 8107798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 31133829 - 31133783
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    ||||| |||||||||||||| |||||| |||||| ||||||||||||    
T  31133829 ttcatattctttgtctcaaaatataagaaaaaaagaccaacttttat 31133783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 391
Target Start/End: Complemental strand, 41809065 - 41809003
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    ||||| ||||||||||| ||||||||||||| || |||||||||  ||||||||  |||||||    
T  41809065 attttttttgtctcaaaatataagcaaaaaagacaaacttttattctatttaatcttgttttt 41809003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 7022635 - 7022590
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  7022635 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7022590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 7858456 - 7858501
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  7858456 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7858501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 13143660 - 13143724
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||||| |||| ||||||||||||| |  |||||||||| || |||||  |||||||    
T  13143660 tcattttctttgtcccaaaatataagcaaaaaagataaacttttatcctaattaatcttgttttt 13143724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 33563770 - 33563718
Alignment:
Q  331 tttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaatt 383  Q
    |||||||||| |||||||||||||||||  |  |||||||||| |||||||||    
T  33563770 tttctttgtcccaaattataagcaaaaatgataaacttttatcctatttaatt 33563718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 3e-55; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 328 - 489
Target Start/End: Complemental strand, 35888210 - 35888050
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagc 427  Q
    |||||| |||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||    
T  35888210 cattttatttgtcccaaattataag-aaaaaagaccaactttcatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaataaaatgc 35888112  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||    
T  35888111 aaagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgt 35888050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 342 - 489
Target Start/End: Complemental strand, 31769189 - 31769043
Alignment:
Q  342 caaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaat 441  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  31769189 caaattataagcaaaaag-accaacttttatcatatttaattatgttttttcaaaatattatcttttccaaaggaaaattaaatgcaaagtgcattcaat 31769091  T
Q  442 ttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    || ||||  |||| |||||||||||||||||||| |||||||||||||    
T  31769090 ttgctctcatttttattttctctataatcaactatcaatgaaaattgt 31769043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 329 - 489
Target Start/End: Original strand, 39170454 - 39170613
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 428  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| || ||||| |||||||||| |||| |||||||||| |||    
T  39170454 attttctttgtctcaaattataaacaaaaaatatcaacttttattatatttaattatgttgttacaaaaaattatctttt-caaaagaaaattaaatgca 39170552  T
Q  429 aagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    ||||||||||||||| || | | |||||||||||| ||||||||  || ||||||||||||    
T  39170553 aagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgt 39170613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 327 - 487
Target Start/End: Original strand, 38260232 - 38260393
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaactttt-atcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaa 425  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||| || |||||||||||| || |||||||| ||||||||||||||| ||||||||||     
T  38260232 tcattttctttgtcccaaattataagtaaaaaatacaaactttttatgatatttaattatattgtttcaaaaaattatcttttccaaatgaaaattaaat 38260331  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaatt 487  Q
    |||||||||||| ||||| |||| | |||||||||||| ||||| ||  |||||||||||||    
T  38260332 gcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaatt 38260393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 329 - 468
Target Start/End: Original strand, 22369145 - 22369284
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaagga-aaattaaaagc 427  Q
    ||||||||||| |||||||||||| |||||| || |||||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||| ||    
T  22369145 attttctttgtatcaaattataagaaaaaaaaactaacttttatcatatttaattatgttttttcaaaaaatcatctttt-caaaggagaaattaaatgc 22369243  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataa 468  Q
    ||  |||||||| | | |||| | ||||||||| |||||||    
T  22369244 aatttgcattcattatgctctctctttcattttgtctataa 22369284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 331 - 469
Target Start/End: Original strand, 47383323 - 47383460
Alignment:
Q  331 tttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaa 429  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||| | || ||||||||||| | ||||||||| | ||    
T  47383323 tttctttgtctcaaaatataagcaaaaaataccaacttttatgatatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgtaa 47383420  T
Q  430 agtgcattcaatttactctatttttcattttctctataat 469  Q
    | ||||||||||||| |||  |||| |||||||| |||||    
T  47383421 attgcattcaatttattctcctttttattttctccataat 47383460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 327 - 468
Target Start/End: Complemental strand, 33092882 - 33092741
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaag 426  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||| |||| || |||||||  ||||  |||||||| |    
T  33092882 tcattttcattgtctcatattataagcaaaaaataccaacttttatcatactcaattatgttatttaaaaaaatcatctttttaaaagagaaattaaatg 33092783  T
Q  427 caaagtgcattcaatttactctatttttcattttctctataa 468  Q
    |||| |||||||| | | ||||   |||||||||| ||||||    
T  33092782 caaaatgcattcattatgctcttcctttcattttcactataa 33092741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 44600359 - 44600500
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||||||  | |||||||||     
T  44600359 tcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaataaatcatcttttccagtgtaaaattaaat 44600456  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||  ||||||||||||  ||| |||||  ||||||| |||||    
T  44600457 gcaagttgcattcaatttgttctcttttttgttttctccataat 44600500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 377 - 487
Target Start/End: Original strand, 3777945 - 3778055
Alignment:
Q  377 tttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactac 476  Q
    ||||||||| || ||||||||  ||||||||||||||||||||||||| | |||||||||||||||| || | | |||||||||||| |||| |||  |     
T  3777945 tttaattatattgtttcaaaaatttatcttttccaaaggaaaattaaatgaaaagtgcattcaatttgctttctctttcattttctcaataaccaatgat 3778044  T
Q  477 caatgaaaatt 487  Q
    |||||||||||    
T  3778045 caatgaaaatt 3778055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 469
Target Start/End: Original strand, 40583068 - 40583199
Alignment:
Q  337 tgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgca 435  Q
    ||||||||| ||||||||||||||||||||||||||  ||||  |||||||||||||||| | || || |||| ||| | ||||||||| ||||| ||||    
T  40583068 tgtctcaaaatataagcaaaaaataccaacttttatgttatt--attatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgca 40583165  T
Q  436 ttcaatttactctatttttcattttctctataat 469  Q
    ||||||||| |||  |||| |||||||| |||||    
T  40583166 ttcaatttattctcctttttattttctccataat 40583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 469
Target Start/End: Original strand, 35181068 - 35181246
Alignment:
Q  290 tatactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttt 389  Q
    ||||||| |||||||||||| |||||||         |||| |||||||||||| | ||||||||||||| ||||||||||||  ||||  |||||||||    
T  35181068 tatactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcagaatataagcaaaaaagaccaacttttatgctatt--attatgttt 35181165  T
Q  390 tttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||||| | || ||||||| ||| | ||||||||| ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  35181166 tttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 35181246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 43108107 - 43107965
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatg-ttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||| |||||||||| | || ||||||||||| | |||||||||    
T  43108107 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgtttttttcaaacaaatcatcttttccaatgtaaaattaaa 43108010  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  43108009 tgcaaattgcattcaatttgttctcctttttattttctccataat 43107965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 24151820 - 24151764
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattat 385  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  24151820 attttctttgtcccaaattataagcaaaaaagaccaacttttatcatatttaattat 24151764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 41889084 - 41889225
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| | ||||||||||   |||  |||||||||||||||| | || ||||||||||| | |||||| |||    
T  41889084 tcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgccatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattcaaa 41889181  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  41889182 gcaaattgcattcaatttgttctcctttttattttctccataat 41889225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 45598817 - 45598958
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| || || ||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  45598817 tcatgttctttgtctcaaaatataagcaaaaaagactaatttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 45598914  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||||| ||||||||||||  |||  |||| |||||||| |||||    
T  45598915 gcaaattgcattcaatttgttctcctttttattttctccataat 45598958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 34808132 - 34808247
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||| ||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || ||||||| ||| | |||||||||     
T  34808132 tcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaacaaatcatctttttcaacgtaaaattaaat 34808229  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||| ||||||||||||    
T  34808230 gcaaattgcattcaattt 34808247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 36576331 - 36576446
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| |||||| |||||| || |||||||||  ||||  |||||||||||||||| | || ||||||||||| | |||||||||     
T  36576331 tcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgctatt--attatgttttttcaaataaatcatcttttccaatgtaaaattaaat 36576428  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||  ||||||||||||    
T  36576429 gcaagttgcattcaattt 36576446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 469
Target Start/End: Complemental strand, 22111511 - 22111390
Alignment:
Q  347 tataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttac 445  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||||| | || || |||| ||| | ||||||||| ||||| |||||||||||||     
T  22111511 tataagcaaaaaataccaacttttatgttatt--attatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgcattcaatttat 22111414  T
Q  446 tctatttttcattttctctataat 469  Q
    |||  |||| |||||||| |||||    
T  22111413 tctcctttttattttctccataat 22111390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 469
Target Start/End: Complemental strand, 41815894 - 41815753
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||  ||||  |||||||||||||||| | || || |||||||| | |||||||||     
T  41815894 tcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaataaatcatattttccaatgtaaaattaaat 41815797  T
Q  426 gcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    | ||  ||||||||||||  |||  |||| |||||||| |||||    
T  41815796 gtaagttgcattcaatttgttctcctttttattttctccataat 41815753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 326 - 443
Target Start/End: Original strand, 3157348 - 3157464
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    ||||||||| |||||||||| ||||||||||||| || |||||||||  ||||  ||||||| |||||||| | || ||||||||||| | |||||||||    
T  3157348 ttcattttccttgtctcaaaatataagcaaaaaagactaacttttatgctatt--attatgtattttcaaacaaatcatcttttccaatgtaaaattaaa 3157445  T
Q  425 agcaaagtgcattcaattt 443  Q
     ||||  ||||||||||||    
T  3157446 tgcaagttgcattcaattt 3157464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 469
Target Start/End: Complemental strand, 21654316 - 21654181
Alignment:
Q  333 tctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaag 431  Q
    ||||||||||||| ||||| ||||||  ||||||||||||  ||||  |||||||||||||||| | || | ||||||||| | ||||||||| |||||     
T  21654316 tctttgtctcaaaatataaacaaaaaggaccaacttttatgctatt--attatgttttttcaaacaaatcaccttttccaatgtaaaattaaatgcaaat 21654219  T
Q  432 tgcattcaatttactctatttttcattttctctataat 469  Q
    | ||||||||||  |||  ||||||||||||| |||||    
T  21654218 tacattcaatttgttctccttttcattttctccataat 21654181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 469
Target Start/End: Original strand, 40560297 - 40560436
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||||||| ||||| ||||||| ||| | ||||||  |||||  ||||||||||||||| | || ||||||||||| | ||||||||| ||    
T  40560297 attttctttgtctcaaaatataatcaaaaaagacccatttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 40560394  T
Q  428 aaagtgcattcaatttactctatttttcattttctctataat 469  Q
    ||  |||||| |||||| |||  |||| |||||||| |||||    
T  40560395 aagttgcatttaatttattctcctttttattttctccataat 40560436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 42617584 - 42617699
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||| ||||||| ||||||||||||| || |||| |||| |||||  |||||||||||||||| | ||||| |||| ||| | |||||||||     
T  42617584 tcatattctttttctcaaaatataagcaaaaaagacaaactcttatgatatt--attatgttttttcaaacaaattatttttttcaatgtaaaattaaat 42617681  T
Q  426 gcaaagtgcattcaattt 443  Q
    ||||| ||||||||||||    
T  42617682 gcaaattgcattcaattt 42617699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 469
Target Start/End: Complemental strand, 19933257 - 19933115
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||||||||||| ||||||| ||||||||||||| |  |||||||||  |||||  ||||||||||||||| | || ||||||||||| | |||||||||    
T  19933257 ttcattttctttatctcaaaatataagcaaaaaagataaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 19933160  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  19933159 tgcaagttgcatttaatttgttctcctttttattttctccataat 19933115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 469
Target Start/End: Complemental strand, 19964396 - 19964254
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaa 424  Q
    |||||||||||| ||||||| ||||||||||||| |  |||||||||  |||||  ||||||||||||||| | || ||||||||||| | |||||||||    
T  19964396 ttcattttctttatctcaaaatataagcaaaaaagataaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 19964299  T
Q  425 agcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
     ||||  |||||| |||||  |||  |||| |||||||| |||||    
T  19964298 tgcaagttgcatttaatttgttctcctttttattttctccataat 19964254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 469
Target Start/End: Original strand, 23106373 - 23106507
Alignment:
Q  335 tttgtctcaaattataagcaaaaaat-accaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagt 432  Q
    ||||||||||| |||||||||||||  || |||||||||  ||||  |||||||||||||||| | || ||||||||||| | ||||||||| ||||| |    
T  23106373 tttgtctcaaaatataagcaaaaaaagactaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaatt 23106470  T
Q  433 gcattcaatttactctatttttcattttctctataat 469  Q
    |||||||||||  |||  |||| |||||||| |||||    
T  23106471 gcattcaatttgttctcctttttattttctccataat 23106507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 443
Target Start/End: Original strand, 39348708 - 39348817
Alignment:
Q  333 tctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagatta-tcttttccaaaggaaaattaaaagcaaag 431  Q
    |||||||  |||| ||||||||||||| ||||||||||||  ||||  ||| |||| |||||||| |||| |||||||||||| ||||||||| |||||     
T  39348708 tctttgtaccaaaatataagcaaaaaagaccaacttttatgctatt--attgtgttgtttcaaaaaattaatcttttccaaagtaaaattaaatgcaaat 39348805  T
Q  432 tgcattcaattt 443  Q
    || |||||||||    
T  39348806 tgtattcaattt 39348817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 25944473 - 25944544
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||  |||||||| ||||    
T  25944473 ttcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaa 25944544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 337 - 469
Target Start/End: Original strand, 23731483 - 23731614
Alignment:
Q  337 tgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgca 435  Q
    ||||||||| ||||||||||||| | ||||||||||  |||||  ||||||||||||||| | || ||||||||||| | ||||||||| ||||  ||||    
T  23731483 tgtctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgca 23731580  T
Q  436 ttcaatttactctatttttcattttctctataat 469  Q
    || |||||  |||  |||| |||||||| |||||    
T  23731581 tttaatttgttctcctttttattttctccataat 23731614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 4910894 - 4910825
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||||| |||| ||||||||||||  || ||||||||| |||||||||  |||||||||||||    
T  4910894 cattttctttgtcccaaaatataagcaaaaagaacaaacttttattatatttaatcttgttttttcaaaa 4910825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 25651503 - 25651422
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatctttt 408  Q
    ||||||||||| || |||||| ||||  ||||| || ||||||||||||||||| ||| |||||||||||| || |||||||    
T  25651503 tcattttctttatcccaaattttaagttaaaaagactaacttttatcatatttagttaagttttttcaaaaaatcatctttt 25651422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 443
Target Start/End: Complemental strand, 32491305 - 32491193
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaagc 427  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||||  ||||   ||||||||||||||| | || |||||||| || | ||||||||| ||    
T  32491305 attttctttgtctgaaaatataagcaaaaaaaaccaacttttatgctatt---ttatgttttttcaaacaaatcatcttttcgaatgtaaaattaaatgc 32491209  T
Q  428 aaagtgcattcaattt 443  Q
    ||  |||||| |||||    
T  32491208 aagttgcatttaattt 32491193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 469
Target Start/End: Original strand, 48879321 - 48879442
Alignment:
Q  347 tataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagatt-atcttttccaaaggaaaattaaaagcaaagtgcattcaatttac 445  Q
    |||||| |||||| ||||||||||||  ||||  ||||||||||||||||| | | ||||||| ||| | ||||||||| ||||| ||||||||||||      
T  48879321 tataagtaaaaaagaccaacttttatgttatt--attatgttttttcaaaaaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgt 48879418  T
Q  446 tctatttttcattttctctataat 469  Q
    |||  |||| |||||||| |||||    
T  48879419 tctcctttttattttctccataat 48879442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 489
Target Start/End: Original strand, 29713149 - 29713268
Alignment:
Q  370 tatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataat 469  Q
    |||||||||||||| |||| |||||||| ||||| |||| |||||  |||||||| ||||| |  ||| | | ||| || | ||||||||||||||||||    
T  29713149 tatcatatttaattttgttatttcaaaaaattatttttttcaaagagaaattaaatgcaaattatatttattataccctctctttcattttctctataat 29713248  T
Q  470 caactaccaatgaaaattgt 489  Q
     ||   ||||||||||||||    
T  29713249 taatatccaatgaaaattgt 29713268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 30082319 - 30082409
Alignment:
Q  382 ttatgttttttcaaaagatt-atcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatca 471  Q
    ||||||| |||||||| | | ||||||||||||| ||||||||| ||||| ||||||||||||| ||| ||||  ||| |||| |||||||    
T  30082319 ttatgttatttcaaaaaaatcatcttttccaaagtaaaattaaatgcaaattgcattcaatttattctcttttctattctctccataatca 30082409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 9818394 - 9818439
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  9818394 tcattttctttttctcaaaatataagcaaaaaagaccaacttttat 9818439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 10720319 - 10720364
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  10720319 tcattttctttttctcaaaatataagcaaaaaagaccaacttttat 10720364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 18206509 - 18206464
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||    
T  18206509 tcattttctttgtctcaaaatataagcaaaaaaaaccatcttttat 18206464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 39337444 - 39337485
Alignment:
Q  331 tttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    |||||||||| |||| ||||||||||||||||||||||||||    
T  39337444 tttctttgtcccaaaatataagcaaaaaataccaacttttat 39337485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 471
Target Start/End: Complemental strand, 35084250 - 35084159
Alignment:
Q  381 attatgttttttca-aaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatca 471  Q
    ||||||||| |||| ||| || ||| ||||||||| ||||||||| ||||| |||||| |||||  |||  ||||||||||||| |||||||    
T  35084250 attatgtttcttcataaaaatcatcctttccaaagtaaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatca 35084159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 7989491 - 7989425
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaa 395  Q
    ||||||| ||||| ||||| |||||| |||||| ||||||||||||  ||||  |||||||||||||||    
T  7989491 tcattttatttgtttcaaaatataagtaaaaaagaccaacttttatgttatt--attatgttttttcaa 7989425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 18102459 - 18102504
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  18102459 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 18102504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 22624057 - 22624024
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaat 360  Q
    |||||||||||||| |||||||||||||||||||    
T  22624057 tcattttctttgtcccaaattataagcaaaaaat 22624024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 30082277 - 30082322
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    |||||||||||||| |||| ||||||||||||| ||||| ||||||    
T  30082277 tcattttctttgtcccaaaatataagcaaaaaagaccaatttttat 30082322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 33153018 - 33153067
Alignment:
Q  394 aaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaattt 443  Q
    |||| |||||||||| ||||| ||||||||| ||||| ||||||||||||    
T  33153018 aaaaaattatctttttcaaagtaaaattaaatgcaaattgcattcaattt 33153067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 41890461 - 41890416
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    |||| |||||||||||||| ||||||||||||| ||||| ||||||    
T  41890461 tcatattctttgtctcaaaatataagcaaaaaagaccaatttttat 41890416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 47778670 - 47778754
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaa 412  Q
    |||||||||||||| |||| ||||||||||||| || || ||||||  ||||||||  || ||||| |||| || |||||||||||    
T  47778670 tcattttctttgtcccaaaatataagcaaaaaagacaaatttttattctatttaatcttg-tttttaaaaaaatcatcttttccaa 47778754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 489
Target Start/End: Complemental strand, 19912922 - 19912850
Alignment:
Q  417 aaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||  |||||||||||||||    
T  19912922 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgt 19912850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 47557977 - 47557933
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttat 372  Q
    ||||||||||||| |||| ||||||||||||| || |||||||||    
T  47557977 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 47557933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 291 - 489
Target Start/End: Complemental strand, 6152 - 5957
Alignment:
Q  291 atactctctccgtcctaaattataagcnnnnnnnnttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgtttt 390  Q
    |||||| ||||||||||||||||||||         | |||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  6152 atactcgctccgtcctaaattataagcaaaaaaaacttattttctttgtcccaagttataagcaaaaaa-accaacttttatcatatttaattatgtttt 6054  T
Q  391 ttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctatttttcattttctctataatcaactaccaatgaaaattgt 489  Q
    |||||||    ||||||| |||| |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||    
T  6053 ttcaaaaac--atctttttcaaaagaaaattaaatgcaaagtgcattcaatttactctctttttcattttttctataatcaactatcaaggaaaattgt 5957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 909 - 980
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||  |||||||| ||||    
T  909 ttcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttttaaaa 980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 8869 - 8940
Alignment:
Q  326 ttcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||||||| |||| ||||||||||||| || |||||||||| ||||||||  |||||||| ||||    
T  8869 ttcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttttaaaa 8940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 441
Target Start/End: Original strand, 4545 - 4657
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 425  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  ||||||||||| |||| | || ||| |||||||   |||||||||     
T  4545 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgtttttccaaacaaatcatc-tttccaatataaaattaaat 4641  T
Q  426 gcaaagtgcattcaat 441  Q
    ||||| ||||||||||    
T  4642 gcaaattgcattcaat 4657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 22781 - 22721
Alignment:
Q  337 tgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaa 397  Q
    ||||||||||||||||||||||| || ||||||| | ||| ||||||||||| ||||||||    
T  22781 tgtctcaaattataagcaaaaaagacaaacttttgttatacttaattatgttatttcaaaa 22721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1157 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 2102 - 2045
Alignment:
Q  327 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattat 385  Q
    ||||||||| |||| ||||||||||||| |||| || ||||||| ||||||||||||||    
T  2102 tcattttctatgtcccaaattataagca-aaaagacaaacttttgtcatatttaattat 2045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 157694 - 157756
Alignment:
Q  329 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttt 391  Q
    |||||||||||| |||| ||||||||||||| || |||||||||  ||||||||  |||||||    
T  157694 attttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgttttt 157756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 77887 - 77932
Alignment:
Q  328 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 373  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  77887 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University