View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6531_high_1 (Length: 908)

Name: NF6531_high_1
Description: NF6531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6531_high_1
NF6531_high_1
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-354)||(200029-200362)
[»] chr4 (11 HSPs)
chr4 (20-354)||(28948413-28948746)
chr4 (20-354)||(22703057-22703381)
chr4 (20-354)||(22990736-22991060)
chr4 (221-354)||(22698733-22698866)
chr4 (221-354)||(22981664-22981797)
chr4 (221-354)||(22995251-22995384)
chr4 (217-340)||(56560508-56560631)
chr4 (217-306)||(24036208-24036297)
chr4 (217-340)||(16565539-16565662)
chr4 (217-303)||(15618844-15618930)
chr4 (251-313)||(52056980-52057042)
[»] chr5 (6 HSPs)
chr5 (221-354)||(22809984-22810117)
chr5 (217-340)||(33232457-33232580)
chr5 (217-340)||(7071992-7072115)
chr5 (217-340)||(22481515-22481638)
chr5 (114-160)||(22808657-22808703)
chr5 (267-340)||(27738523-27738596)
[»] chr8 (6 HSPs)
chr8 (221-354)||(19648194-19648327)
chr8 (217-306)||(193387-193476)
chr8 (217-306)||(720991-721080)
chr8 (217-306)||(882098-882187)
chr8 (217-306)||(30983217-30983306)
chr8 (217-340)||(44240122-44240245)
[»] chr1 (6 HSPs)
chr1 (221-354)||(4345989-4346122)
chr1 (217-340)||(46407488-46407611)
chr1 (224-340)||(35606336-35606452)
chr1 (217-306)||(50978933-50979022)
chr1 (217-340)||(35569867-35569990)
chr1 (259-299)||(50979027-50979067)
[»] chr3 (4 HSPs)
chr3 (221-354)||(7011653-7011786)
chr3 (217-306)||(51125377-51125466)
chr3 (217-306)||(52692542-52692631)
chr3 (244-323)||(16246797-16246876)
[»] chr2 (8 HSPs)
chr2 (221-350)||(23360928-23361058)
chr2 (217-340)||(13895999-13896122)
chr2 (217-340)||(14036616-14036739)
chr2 (217-306)||(14380107-14380196)
chr2 (217-340)||(5916905-5917028)
chr2 (217-340)||(36311597-36311720)
chr2 (716-765)||(9035585-9035634)
chr2 (728-765)||(45192985-45193022)
[»] chr6 (4 HSPs)
chr6 (217-340)||(21515663-21515786)
chr6 (217-306)||(30019220-30019309)
chr6 (217-340)||(16547456-16547579)
chr6 (224-301)||(17830768-17830845)
[»] chr7 (3 HSPs)
chr7 (217-301)||(37638703-37638787)
chr7 (217-301)||(10372715-10372799)
chr7 (256-313)||(12963342-12963399)
[»] scaffold0394 (1 HSPs)
scaffold0394 (224-295)||(6607-6678)


Alignment Details
Target: scaffold0009 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 20 - 354
Target Start/End: Complemental strand, 200362 - 200029
Alignment:
Q  20 acctgctacggctgggggtagttttttggccaagggcctggttggtttttgttgtctctgtaattgctttctagactttctaggcnnnnnnnnatgttaa 119  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||        |||||||    
T  200362 acctgctacggctgggggtagttttttggccaagggtctggttggtttttgttgtctctgtagttgctttctagactttctaggcttttttt-atgttaa 200264  T
Q  120 ctggactgcctcttccttctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcagtaa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  200263 ctggactgcctcttccttctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcaataa 200164  T
Q  220 tgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaa 319  Q
    ||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  200163 tgaggtattcaattattatcactcaagtttaaggtgcccaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaa 200064  T
Q  320 ttcacaattaagacacaagttgaagtcgttgttgc 354  Q
    |||||||||| |||||| ||| |||| ||| ||||    
T  200063 ttcacaattatgacacaggttcaagtggttattgc 200029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 20 - 354
Target Start/End: Complemental strand, 28948746 - 28948413
Alignment:
Q  20 acctgctacggctgggggtagttttttggccaagggcctggttggtttttgttgtctctgtaattgctttctagactttctaggcnnnnnnnnatgttaa 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||         |||||||    
T  28948746 acctgctacggttgggggtagttttttggccaagggcctggttggttttgtttgtctctgtaattgctttctagactttctagg-atttttttatgttaa 28948648  T
Q  120 ctggactgcctcttccttctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcagtaa 219  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28948647 ctggactgcctcttccttctggtgtttcggtttgcaaacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcaataa 28948548  T
Q  220 tgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaa 319  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28948547 tgaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaa 28948448  T
Q  320 ttcacaattaagacacaagttgaagtcgttgttgc 354  Q
    ||||||||||||||||| ||| |||| ||| ||||    
T  28948447 ttcacaattaagacacaggttcaagtggttattgc 28948413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 354
Target Start/End: Complemental strand, 22703381 - 22703057
Alignment:
Q  20 acctgctacggctgggggtagttttttggccaagggcctggttggtttttgttgtctctgtaattgctttctagactttctaggcnnnnnnnnatgttaa 119  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| |            |||||||    
T  22703381 acctgctacggctgggggtagttttttggccaagggtctggttggtttttgttgtctctgtagttgctttctaggcttttt----------ttatgttaa 22703292  T
Q  120 ctggactgcctcttccttctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcagtaa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22703291 ctggactgcctcttccttctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcaataa 22703192  T
Q  220 tgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaa 319  Q
    ||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22703191 tgaggtattcaattattatcactcaagtttaaggtgcccaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaa 22703092  T
Q  320 ttcacaattaagacacaagttgaagtcgttgttgc 354  Q
    |||||||||| |||||| ||| |||| ||| ||||    
T  22703091 ttcacaattatgacacaggttcaagtggttattgc 22703057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 354
Target Start/End: Original strand, 22990736 - 22991060
Alignment:
Q  20 acctgctacggctgggggtagttttttggccaagggcctggttggtttttgttgtctctgtaattgctttctagactttctaggcnnnnnnnnatgttaa 119  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| |            |||||||    
T  22990736 acctgctacggctgggggtagttttttggccaagggtctggttggtttttgttgtctctgtagttgctttctaggcttttt----------ttatgttaa 22990825  T
Q  120 ctggactgcctcttccttctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcagtaa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22990826 ctggactgcctcttccttctggtgtttcggtttgcagacatcagttgggcaaacatgtttaaggtgcactcaagtttcaatatttcatcgtcttcaataa 22990925  T
Q  220 tgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaa 319  Q
    ||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22990926 tgaggtattcaattattatcactcaagtttaaggtgcccaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaa 22991025  T
Q  320 ttcacaattaagacacaagttgaagtcgttgttgc 354  Q
    |||||||||| |||||| ||| |||| ||| ||||    
T  22991026 ttcacaattatgacacaggttcaagtggttattgc 22991060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 221 - 354
Target Start/End: Original strand, 22698733 - 22698866
Alignment:
Q  221 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 320  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22698733 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 22698832  T
Q  321 tcacaattaagacacaagttgaagtcgttgttgc 354  Q
    ||||||||||||||||||||||||| ||||||||    
T  22698833 tcacaattaagacacaagttgaagttgttgttgc 22698866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 221 - 354
Target Start/End: Complemental strand, 22981797 - 22981664
Alignment:
Q  221 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 320  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22981797 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 22981698  T
Q  321 tcacaattaagacacaagttgaagtcgttgttgc 354  Q
    ||||||||||||||||||||||||| ||||||||    
T  22981697 tcacaattaagacacaagttgaagttgttgttgc 22981664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 221 - 354
Target Start/End: Complemental strand, 22995384 - 22995251
Alignment:
Q  221 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 320  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22995384 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 22995285  T
Q  321 tcacaattaagacacaagttgaagtcgttgttgc 354  Q
    ||||||||||||||||||||||||| ||||||||    
T  22995284 tcacaattaagacacaagttgaagttgttgttgc 22995251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 56560508 - 56560631
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||    
T  56560508 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcct 56560607  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || || | | || |||||||||||    
T  56560608 aactttaaatttgagacacaagtt 56560631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 24036297 - 24036208
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 306  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  24036297 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 24036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 16565539 - 16565662
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||| | ||||| ||||||| |||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||    
T  16565539 taatgaagtaatcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaattctgcgtagcatgcct 16565638  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || |||| |  | |||||||||||    
T  16565639 aagttcaaatatgagacacaagtt 16565662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 15618844 - 15618930
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattct 303  Q
    |||||| ||||| ||||| ||||||| |||| || | |||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  15618844 taatgaagtattcaattactatcactcaagtttaggatgcacaattgaaaaaacttttggggtatggaagaatagatttgcaattct 15618930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 52057042 - 52056980
Alignment:
Q  251 aggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatg 313  Q
    |||||||||||||||| ||||||| | ||||||||||| ||||||| ||| ||||| ||||||    
T  52057042 aggtgcacaatagaaataacttttagggtatggaagaacagatttgaaatcctacgtcgcatg 52056980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 4e-62; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 221 - 354
Target Start/End: Original strand, 22809984 - 22810117
Alignment:
Q  221 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 320  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22809984 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 22810083  T
Q  321 tcacaattaagacacaagttgaagtcgttgttgc 354  Q
    ||||||||||||||||||||||||||||||||||    
T  22810084 tcacaattaagacacaagttgaagtcgttgttgc 22810117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 33232457 - 33232580
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||    
T  33232457 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcct 33232556  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || || | | || |||||||||||    
T  33232557 aactttaaatttgagacacaagtt 33232580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 217 - 340
Target Start/End: Complemental strand, 7072115 - 7071992
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||||||||||||||||| || | |||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||| |||||| ||    
T  7072115 taatgaagtatttaattattatcactcaaatttaaggtgcacaatagaaagaacttttggggtatggaagaacatatttgcaatcctacgtcgcatgcct 7072016  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || || | | || |||||||||||    
T  7072015 aactttaaatttgagacacaagtt 7071992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 22481515 - 22481638
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||    
T  22481515 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaattctgcgtagcatgcct 22481614  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || |||| |  | |||||||||||    
T  22481615 aagttcaaatatgagacacaagtt 22481638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 22808657 - 22808703
Alignment:
Q  114 tgttaactggactgcctcttccttctggtgtttcggtttgcagacat 160  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||    
T  22808657 tgttaattggactgcctcttccttctggtgtttcggtctgcagacat 22808703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 27738596 - 27738523
Alignment:
Q  267 gaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaattcacaattaagacacaagtt 340  Q
    |||||||||| ||||||||||| ||||||||||| ||||| |||||| |||| || | | || |||||||||||    
T  27738596 gaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcctaactttaaatttgagacacaagtt 27738523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 1e-59; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 221 - 354
Target Start/End: Original strand, 19648194 - 19648327
Alignment:
Q  221 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 320  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19648194 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 19648293  T
Q  321 tcacaattaagacacaagttgaagtcgttgttgc 354  Q
    ||||||||||||||||||||||||||||||||||    
T  19648294 tcacaattaagacacaagttgaagtcgttgttgc 19648327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 193387 - 193476
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 306  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  193387 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 193476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 720991 - 721080
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 306  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  720991 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 721080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 882098 - 882187
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 306  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  882098 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 882187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 30983306 - 30983217
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 306  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  30983306 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 30983217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 44240122 - 44240245
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||||||||||||||||| |||| |||| | ||||||||||||||||||||| ||||||||||| | ||||||||| ||||| |||||| ||    
T  44240122 taatgaagtatttaattattatcactcaagtttaagatacacaatagaaagaacttttggggtatggaagaacatatttgcaatcctacgtcgcatgcct 44240221  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || || | | || |||||||||||    
T  44240222 aactttaaatttgagacacaagtt 44240245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 1e-59; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 221 - 354
Target Start/End: Original strand, 4345989 - 4346122
Alignment:
Q  221 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 320  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4345989 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 4346088  T
Q  321 tcacaattaagacacaagttgaagtcgttgttgc 354  Q
    ||||||||||||||||||||||||||||||||||    
T  4346089 tcacaattaagacacaagttgaagtcgttgttgc 4346122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 46407488 - 46407611
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||    
T  46407488 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcct 46407587  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || || | | || |||||||||||    
T  46407588 aactttaaatttgagacacaagtt 46407611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 224 - 340
Target Start/End: Original strand, 35606336 - 35606452
Alignment:
Q  224 gtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaattca 323  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||| ||||  |||||| |||| || |    
T  35606336 gtatttaattattatcactcaagtttaaggtgcacaatagaaagaactgttggggtatggaagaacagatttgcaatcctacatcgcatgcctaacttta 35606435  T
Q  324 caattaagacacaagtt 340  Q
     | ||||||||||||||    
T  35606436 aatttaagacacaagtt 35606452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 50979022 - 50978933
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 306  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  50979022 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 50978933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 217 - 340
Target Start/End: Complemental strand, 35569990 - 35569867
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| ||||||||||||| |||||||||||| ||  ||||| ||    
T  35569990 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaataaatttgcaattctgcgtagcatgcct 35569891  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || |||| |  | |||||||||||    
T  35569890 aagttcaaatatgagacacaagtt 35569867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 50979067 - 50979027
Alignment:
Q  259 aatagaaagaacttttggtgtatggaagaatagatttgcaa 299  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  50979067 aatagaaagaacttttggggtatggaagaacagatttgcaa 50979027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 2e-57; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 221 - 354
Target Start/End: Original strand, 7011653 - 7011786
Alignment:
Q  221 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaat 320  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7011653 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgcctaaat 7011752  T
Q  321 tcacaattaagacacaagttgaagtcgttgttgc 354  Q
    |||||||||||| |||||||||||||||||||||    
T  7011753 tcacaattaagatacaagttgaagtcgttgttgc 7011786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 51125466 - 51125377
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 306  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  51125466 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 51125377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 52692542 - 52692631
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 306  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  52692542 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 52692631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 244 - 323
Target Start/End: Complemental strand, 16246876 - 16246797
Alignment:
Q  244 aagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgactaaattca 323  Q
    |||| |||| |||||||| ||||||||||||   | ||||||||||||||||||||||||||| |||||| |||| ||||    
T  16246876 aagtttaagatgcacaattgaaagaacttttaaggcatggaagaatagatttgcaattctacgtcgcatgcctaagttca 16246797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 4e-53; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 221 - 350
Target Start/End: Complemental strand, 23361058 - 23360928
Alignment:
Q  221 gaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaactttt-ggtgtatggaagaatagatttgcaattctacgacgcatgactaaa 319  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  23361058 gaggtattcaattattatcactcaagtttaaggtgcacaatagaaagaactttttggtgtatgaaagaatagatttgcaattctacgacgcatgactaaa 23360959  T
Q  320 ttcacaattaagacacaagttgaagtcgttg 350  Q
    |||||||||||||||||||||||||||||||    
T  23360958 ttcacaattaagacacaagttgaagtcgttg 23360928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 13895999 - 13896122
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||    
T  13895999 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcct 13896098  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || || | | || |||||||||||    
T  13896099 aactttaaatttgagacacaagtt 13896122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 14036616 - 14036739
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| ||    
T  14036616 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacgtcgcatgcct 14036715  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || || | | || |||||||||||    
T  14036716 aactttaaatttgagacacaagtt 14036739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 14380107 - 14380196
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 306  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  14380107 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacagatttgcaatcctacg 14380196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 217 - 340
Target Start/End: Complemental strand, 5917028 - 5916905
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||  ||||| ||    
T  5917028 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaattctacgtagcatgcct 5916929  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || |||| |  | |||||||||||    
T  5916928 aagttcaaatatgagacacaagtt 5916905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 36311597 - 36311720
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||    
T  36311597 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaattctgcgtagcatgcct 36311696  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || |||| |  | |||||||||||    
T  36311697 aagttcaaatatgagacacaagtt 36311720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 716 - 765
Target Start/End: Original strand, 9035585 - 9035634
Alignment:
Q  716 ggtttggttaggatgtcagctagttgatccttggttgaaacatgagagac 765  Q
    |||||||| ||||||||||| ||||| || |||||||||||||| |||||    
T  9035585 ggtttggtgaggatgtcagcaagttggtctttggttgaaacatgtgagac 9035634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 728 - 765
Target Start/End: Complemental strand, 45193022 - 45192985
Alignment:
Q  728 atgtcagctagttgatccttggttgaaacatgagagac 765  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  45193022 atgtcagcaagttgatctttggttgaaacatgagagac 45192985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 7e-30; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 217 - 340
Target Start/End: Complemental strand, 21515786 - 21515663
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||| |||||| ||    
T  21515786 taatgaagtatttaattattatcactcaagtttaaggtgcacaatagaaagaacttttggggtatggaagaacatatttgcaatcctacgtcgcatgcct 21515687  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || || | | || |||||||||||    
T  21515686 aactttaaatttgagacacaagtt 21515663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 30019220 - 30019309
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacg 306  Q
    |||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||    
T  30019220 taatgaagtatttaattattatcactctagtttaaggtgcacaatagaaagaacttttggggtatggaagaacatatttgcaatcctacg 30019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 16547456 - 16547579
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatgact 316  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||    
T  16547456 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaattctgcgtagcatgcct 16547555  T
Q  317 aaattcacaattaagacacaagtt 340  Q
    || |||| |  | |||||||||||    
T  16547556 aagttcaaatatgagacacaagtt 16547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 17830845 - 17830768
Alignment:
Q  224 gtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaatt 301  Q
    ||||| ||||| || |||| |||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17830845 gtattcaattactaccactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaatt 17830768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 3e-23; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 37638703 - 37638787
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaatt 301  Q
    |||||| ||||| ||||| ||||||| |||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  37638703 taatgaagtattcaattactatcactcaagtttaagatgcacaattgaaagaacttttggtgtatggaagaatagatttgcaatt 37638787  T

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Target: chr7; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 217 - 301
Target Start/End: Complemental strand, 10372799 - 10372715
Alignment:
Q  217 taatgaggtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagatttgcaatt 301  Q
    |||||| |||||  |||| || |||| |||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  10372799 taatgaagtattcgattactaccactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagatttgcaatt 10372715  T

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Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 12963342 - 12963399
Alignment:
Q  256 cacaatagaaagaacttttggtgtatggaagaatagatttgcaattctacgacgcatg 313  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| || ||||||    
T  12963342 cacaattgaaagaacttttggggtatggaagaatagatttgcaattctgcgtcgcatg 12963399  T

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Target: scaffold0394 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 6678 - 6607
Alignment:
Q  224 gtatttaattattatcacttaagtgtaaggtgcacaatagaaagaacttttggtgtatggaagaatagattt 295  Q
    ||||| ||||| || |||| |||| |||| |||||||| |||||||||||||| ||||||||||||||||||    
T  6678 gtattcaattactaccactcaagtttaagatgcacaattgaaagaacttttggggtatggaagaatagattt 6607  T

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