View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6532_high_7 (Length: 229)
Name: NF6532_high_7
Description: NF6532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6532_high_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 48924719 - 48924952
Alignment:
| Q |
1 |
taaaatccctttttctcccatgaaacaataacagtagaaaatgttggtaagatgatggcagaagtttctttttgcaacttctgattaaggaattcttcca |
100 |
Q |
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| T |
48924719 |
taaaatccctttttctcccatgaaacaataacagtagaaaatgttggtaagatgatggcagaagtttctttttgcaacttctgattaaggaattcttcca |
48924818 |
T |
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| Q |
101 |
taccagttagagttcaacttcaaatgcctaaatccagtaagaat-----nnnnnnnnnnnnnnnntcatcaaaaccattccctattgatattatttagga |
195 |
Q |
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| T |
48924819 |
taccagttagagttcaacttcaaatgcctaaatccagtaagaataaaaaaaaaaaaaaaaaaaaatcatcaaaaccattccctattgatattatttagga |
48924918 |
T |
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| Q |
196 |
tactaaactaaggattaaatccacatcataattt |
229 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
48924919 |
tactaaactaaggattaaatccacatcataattt |
48924952 |
T |
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