View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6533_high_61 (Length: 251)

Name: NF6533_high_61
Description: NF6533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6533_high_61
NF6533_high_61
[»] chr8 (35 HSPs)
chr8 (18-251)||(43872228-43872461)
chr8 (161-248)||(25837629-25837716)
chr8 (161-248)||(35818690-35818777)
chr8 (163-248)||(37392812-37392897)
chr8 (163-247)||(12710365-12710449)
chr8 (165-248)||(7930961-7931044)
chr8 (161-248)||(16313773-16313860)
chr8 (161-248)||(26061862-26061949)
chr8 (162-248)||(38133004-38133090)
chr8 (167-248)||(18297836-18297917)
chr8 (167-248)||(18726886-18726967)
chr8 (165-248)||(26602203-26602286)
chr8 (165-248)||(32661200-32661283)
chr8 (170-248)||(10896482-10896560)
chr8 (166-248)||(38363804-38363886)
chr8 (163-251)||(33533655-33533743)
chr8 (165-248)||(3049731-3049814)
chr8 (159-251)||(5020754-5020846)
chr8 (168-248)||(41432464-41432544)
chr8 (168-248)||(42755592-42755672)
chr8 (165-251)||(25899381-25899467)
chr8 (158-220)||(37982081-37982143)
chr8 (167-242)||(12649859-12649934)
chr8 (165-251)||(15226688-15226774)
chr8 (166-251)||(31117789-31117874)
chr8 (156-225)||(34672074-34672143)
chr8 (163-248)||(40197319-40197404)
chr8 (165-251)||(16219204-16219290)
chr8 (158-224)||(35394073-35394139)
chr8 (194-251)||(6805889-6805946)
chr8 (177-248)||(1554620-1554692)
chr8 (167-251)||(33444885-33444969)
chr8 (208-251)||(35394156-35394199)
chr8 (166-207)||(41228976-41229017)
chr8 (167-231)||(19161024-19161088)
[»] chr2 (48 HSPs)
chr2 (156-251)||(40569731-40569826)
chr2 (163-248)||(37192242-37192327)
chr2 (168-248)||(13760692-13760772)
chr2 (171-251)||(13790018-13790098)
chr2 (163-248)||(4559279-4559364)
chr2 (167-248)||(17965707-17965788)
chr2 (165-248)||(346611-346694)
chr2 (165-248)||(6171513-6171596)
chr2 (165-248)||(11071327-11071410)
chr2 (168-251)||(37233155-37233238)
chr2 (163-248)||(2050586-2050671)
chr2 (168-247)||(3902182-3902261)
chr2 (165-248)||(14777764-14777847)
chr2 (168-251)||(28311959-28312042)
chr2 (165-248)||(37533675-37533758)
chr2 (165-248)||(41729396-41729479)
chr2 (161-248)||(42674927-42675014)
chr2 (166-248)||(5770376-5770458)
chr2 (170-248)||(9734112-9734190)
chr2 (158-248)||(21737674-21737764)
chr2 (165-242)||(23943885-23943962)
chr2 (165-246)||(40951127-40951208)
chr2 (167-251)||(5003098-5003182)
chr2 (167-248)||(638318-638399)
chr2 (166-251)||(20426745-20426830)
chr2 (163-248)||(45693909-45693994)
chr2 (168-244)||(14832536-14832612)
chr2 (167-251)||(39819414-39819498)
chr2 (165-243)||(7007307-7007385)
chr2 (177-251)||(11763663-11763737)
chr2 (165-247)||(18713923-18714005)
chr2 (169-247)||(26309993-26310071)
chr2 (169-251)||(3254355-3254437)
chr2 (173-251)||(4875506-4875584)
chr2 (173-251)||(45408981-45409059)
chr2 (173-225)||(2521381-2521433)
chr2 (173-251)||(27358225-27358303)
chr2 (190-248)||(41750276-41750334)
chr2 (163-243)||(36590843-36590924)
chr2 (169-247)||(1623078-1623156)
chr2 (202-248)||(2521434-2521480)
chr2 (156-225)||(14403495-14403564)
chr2 (165-242)||(25444922-25444999)
chr2 (171-242)||(14253254-14253325)
chr2 (156-185)||(27357953-27357982)
chr2 (189-242)||(41298186-41298239)
chr2 (189-246)||(45212678-45212735)
chr2 (156-185)||(45409302-45409331)
[»] chr7 (39 HSPs)
chr7 (163-247)||(17276426-17276510)
chr7 (163-248)||(9947257-9947342)
chr7 (161-248)||(11329711-11329798)
chr7 (158-248)||(28904452-28904542)
chr7 (158-248)||(35488455-35488545)
chr7 (163-248)||(33378554-33378639)
chr7 (160-248)||(45265314-45265402)
chr7 (161-245)||(45722877-45722961)
chr7 (165-248)||(44565767-44565850)
chr7 (166-248)||(27214121-27214203)
chr7 (167-248)||(34930733-34930814)
chr7 (163-248)||(43948965-43949050)
chr7 (160-248)||(48160839-48160927)
chr7 (161-248)||(27248011-27248098)
chr7 (162-248)||(25924903-25924989)
chr7 (169-251)||(30686254-30686336)
chr7 (170-248)||(44819981-44820059)
chr7 (163-248)||(48313842-48313927)
chr7 (167-246)||(27419492-27419571)
chr7 (165-248)||(48341086-48341168)
chr7 (169-251)||(37534365-37534447)
chr7 (166-243)||(45448665-45448742)
chr7 (171-251)||(18823890-18823970)
chr7 (169-248)||(45045352-45045431)
chr7 (163-217)||(16916182-16916236)
chr7 (159-243)||(5543401-5543485)
chr7 (165-248)||(38396632-38396714)
chr7 (169-251)||(31598449-31598531)
chr7 (170-247)||(38543920-38543998)
chr7 (162-248)||(41632630-41632711)
chr7 (171-248)||(39553910-39553987)
chr7 (163-251)||(31921987-31922077)
chr7 (165-208)||(40212626-40212669)
chr7 (166-251)||(6656733-6656819)
chr7 (168-247)||(45440637-45440713)
chr7 (172-251)||(22156441-22156520)
chr7 (172-251)||(22212356-22212435)
chr7 (171-248)||(25097796-25097874)
chr7 (203-247)||(8419856-8419900)
[»] chr3 (40 HSPs)
chr3 (165-248)||(8476574-8476657)
chr3 (163-248)||(40907986-40908071)
chr3 (158-248)||(11239386-11239476)
chr3 (163-251)||(10822980-10823068)
chr3 (165-248)||(24574289-24574372)
chr3 (165-248)||(26848744-26848827)
chr3 (165-248)||(33218179-33218262)
chr3 (163-248)||(48340023-48340108)
chr3 (168-248)||(43719191-43719271)
chr3 (164-248)||(46359673-46359757)
chr3 (165-248)||(6231767-6231850)
chr3 (167-246)||(20414733-20414812)
chr3 (165-248)||(44952030-44952113)
chr3 (169-248)||(47115123-47115202)
chr3 (165-251)||(53165987-53166073)
chr3 (167-248)||(1098923-1099004)
chr3 (163-251)||(6832185-6832273)
chr3 (168-251)||(43132419-43132502)
chr3 (166-251)||(28770472-28770557)
chr3 (167-251)||(26849408-26849492)
chr3 (168-251)||(24783934-24784017)
chr3 (169-248)||(31611251-31611330)
chr3 (172-251)||(38140631-38140710)
chr3 (169-251)||(6927817-6927899)
chr3 (158-248)||(20297508-20297598)
chr3 (171-248)||(28124702-28124779)
chr3 (167-247)||(29512324-29512404)
chr3 (166-244)||(9320719-9320797)
chr3 (161-251)||(31436185-31436275)
chr3 (166-214)||(27822994-27823042)
chr3 (171-251)||(33650277-33650357)
chr3 (168-251)||(40584336-40584419)
chr3 (170-251)||(49216027-49216108)
chr3 (167-251)||(12228517-12228601)
chr3 (167-251)||(32070994-32071078)
chr3 (172-251)||(18460582-18460661)
chr3 (169-218)||(2566475-2566524)
chr3 (167-251)||(31267610-31267694)
chr3 (163-198)||(19532909-19532944)
chr3 (163-221)||(28693724-28693782)
[»] chr5 (30 HSPs)
chr5 (165-251)||(28429450-28429536)
chr5 (162-248)||(6091434-6091520)
chr5 (163-248)||(22936178-22936263)
chr5 (165-248)||(8406616-8406699)
chr5 (165-248)||(12970796-12970879)
chr5 (165-248)||(18411931-18412014)
chr5 (165-248)||(29543281-29543364)
chr5 (167-248)||(555972-556053)
chr5 (163-248)||(28602276-28602361)
chr5 (168-248)||(11855921-11856001)
chr5 (168-248)||(27481082-27481162)
chr5 (165-248)||(4765826-4765909)
chr5 (169-248)||(19065771-19065850)
chr5 (165-251)||(26637284-26637370)
chr5 (164-248)||(32535658-32535742)
chr5 (159-248)||(14207087-14207176)
chr5 (169-248)||(8646656-8646735)
chr5 (167-251)||(27480735-27480819)
chr5 (168-251)||(1664456-1664539)
chr5 (167-248)||(36703506-36703587)
chr5 (163-251)||(6930362-6930450)
chr5 (171-243)||(16720957-16721029)
chr5 (169-247)||(31583326-31583404)
chr5 (165-251)||(43347157-43347243)
chr5 (156-239)||(20962272-20962356)
chr5 (168-251)||(42012447-42012530)
chr5 (163-251)||(17251534-17251621)
chr5 (163-243)||(35603045-35603124)
chr5 (169-251)||(36978396-36978478)
chr5 (167-220)||(40276534-40276587)
[»] chr4 (44 HSPs)
chr4 (160-246)||(43722985-43723071)
chr4 (163-248)||(25932165-25932250)
chr4 (163-248)||(47670086-47670171)
chr4 (163-248)||(55968266-55968351)
chr4 (165-248)||(13230255-13230338)
chr4 (160-243)||(18405504-18405587)
chr4 (165-248)||(23686513-23686596)
chr4 (161-248)||(27555149-27555236)
chr4 (165-248)||(39835573-39835656)
chr4 (165-248)||(45748061-45748144)
chr4 (162-248)||(41859312-41859398)
chr4 (167-248)||(40435628-40435709)
chr4 (167-248)||(41744487-41744568)
chr4 (163-248)||(45595992-45596077)
chr4 (172-248)||(48519157-48519233)
chr4 (165-248)||(39730559-39730642)
chr4 (165-248)||(48873747-48873830)
chr4 (165-248)||(48879051-48879134)
chr4 (166-251)||(31938132-31938217)
chr4 (163-231)||(18405127-18405195)
chr4 (165-248)||(8321971-8322054)
chr4 (173-248)||(50673170-50673245)
chr4 (167-248)||(27763165-27763246)
chr4 (166-243)||(36860027-36860104)
chr4 (163-248)||(42773672-42773757)
chr4 (160-248)||(6280187-6280275)
chr4 (165-248)||(35999412-35999495)
chr4 (165-251)||(38413902-38413988)
chr4 (165-251)||(51968505-51968591)
chr4 (166-251)||(7258691-7258776)
chr4 (168-248)||(18931482-18931562)
chr4 (163-246)||(935850-935933)
chr4 (173-248)||(34238220-34238295)
chr4 (166-251)||(30790275-30790359)
chr4 (165-224)||(25916302-25916362)
chr4 (168-247)||(10401047-10401126)
chr4 (165-248)||(32953249-32953332)
chr4 (167-213)||(27942465-27942511)
chr4 (164-242)||(12276182-12276260)
chr4 (166-212)||(47426521-47426567)
chr4 (166-251)||(38394634-38394719)
chr4 (169-219)||(32713384-32713434)
chr4 (203-248)||(37296473-37296518)
chr4 (171-247)||(52413959-52414035)
[»] chr1 (52 HSPs)
chr1 (163-248)||(52630494-52630579)
chr1 (162-248)||(1597608-1597694)
chr1 (165-248)||(5806542-5806625)
chr1 (165-248)||(6911208-6911291)
chr1 (165-248)||(47031582-47031665)
chr1 (169-248)||(51445345-51445424)
chr1 (166-248)||(9115561-9115643)
chr1 (166-248)||(25789487-25789569)
chr1 (165-251)||(29091395-29091481)
chr1 (166-247)||(20260353-20260434)
chr1 (163-246)||(8331735-8331818)
chr1 (165-248)||(36361506-36361589)
chr1 (165-248)||(46666431-46666514)
chr1 (158-248)||(14788439-14788529)
chr1 (164-246)||(25473977-25474059)
chr1 (166-248)||(38964945-38965027)
chr1 (166-248)||(39930181-39930263)
chr1 (163-248)||(12190443-12190528)
chr1 (167-247)||(32202580-32202660)
chr1 (168-251)||(13932135-13932218)
chr1 (165-248)||(32824644-32824727)
chr1 (165-242)||(50191036-50191113)
chr1 (168-248)||(2430223-2430303)
chr1 (168-248)||(9832136-9832216)
chr1 (168-251)||(48916285-48916368)
chr1 (180-251)||(52699728-52699799)
chr1 (168-246)||(1228147-1228225)
chr1 (159-245)||(2632570-2632656)
chr1 (165-251)||(5518766-5518852)
chr1 (167-249)||(37436884-37436966)
chr1 (161-247)||(46960347-46960433)
chr1 (172-251)||(13653581-13653661)
chr1 (167-223)||(39329347-39329403)
chr1 (167-246)||(52186265-52186344)
chr1 (168-243)||(35187181-35187257)
chr1 (169-248)||(4683639-4683718)
chr1 (164-251)||(17475572-17475659)
chr1 (163-242)||(49627295-49627374)
chr1 (165-251)||(24116597-24116683)
chr1 (165-251)||(45771815-45771901)
chr1 (157-242)||(3939216-3939301)
chr1 (165-218)||(37726805-37726858)
chr1 (163-243)||(37261540-37261620)
chr1 (168-251)||(31807010-31807093)
chr1 (165-239)||(9011437-9011511)
chr1 (169-251)||(38519323-38519405)
chr1 (189-251)||(45813657-45813719)
chr1 (170-215)||(49824022-49824067)
chr1 (156-186)||(6890171-6890201)
chr1 (156-186)||(6892017-6892047)
chr1 (163-197)||(6978518-6978552)
chr1 (166-247)||(47677368-47677449)
[»] chr6 (16 HSPs)
chr6 (165-247)||(8029025-8029107)
chr6 (163-251)||(6706015-6706103)
chr6 (168-248)||(14170740-14170820)
chr6 (165-248)||(10246382-10246465)
chr6 (162-248)||(18897640-18897726)
chr6 (165-248)||(1316741-1316824)
chr6 (165-248)||(2657422-2657505)
chr6 (167-248)||(16968649-16968730)
chr6 (165-248)||(7053844-7053927)
chr6 (167-251)||(9762303-9762387)
chr6 (162-225)||(11570073-11570136)
chr6 (162-243)||(12328062-12328142)
chr6 (171-248)||(21008245-21008322)
chr6 (168-251)||(14781873-14781955)
chr6 (158-243)||(8314609-8314694)
chr6 (189-248)||(7344760-7344819)
[»] scaffold0006 (2 HSPs)
scaffold0006 (161-248)||(201644-201731)
scaffold0006 (172-251)||(143342-143422)
[»] scaffold0702 (1 HSPs)
scaffold0702 (163-251)||(3828-3916)
[»] scaffold0662 (1 HSPs)
scaffold0662 (163-251)||(4186-4274)
[»] scaffold0189 (1 HSPs)
scaffold0189 (168-248)||(29218-29298)


Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 43872461 - 43872228
Alignment:
Q  18 agtactctatgttgccgcctcagggccacccatgaatatgagacatgcactttaaaaatgaaactcatataaattggtagaaaatatacattatttccat 117  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||    
T  43872461 agtaccctgtgttgccgcctcagggccacccatgaatatgagacatgcactttaaaaatgaaactcatataaagtggtagaacatatacattattttcat 43872362  T
Q  118 gcaagtgaatgttagagagagtgttgataacattcctcttaaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattcctt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43872361 gcaagtgaatgttagagagagtgttgataacattcctcttaaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattcctt 43872262  T
Q  218 gaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||||||||||||||||||    
T  43872261 gaaatatatagatgtaaattttattccaaggtat 43872228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 25837629 - 25837716
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| |||||  |||||||||||||||    
T  25837629 attaagggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaagg 25837716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 35818777 - 35818690
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  35818777 attaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 35818690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 37392897 - 37392812
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  37392897 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 37392812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 12710365 - 12710449
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  ||||||||||||||    
T  12710365 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag 12710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 7930961 - 7931044
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| |||||  |||||||||||||||    
T  7930961 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaagg 7931044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 16313860 - 16313773
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||| |||||  |||||||||||||||    
T  16313860 attaagggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaagg 16313773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 26061862 - 26061949
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  26061862 attaagggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttgtaatataaagatgagaattttattccaagg 26061949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 38133090 - 38133004
Alignment:
Q  162 ttaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| |||||  |||||||||||||||    
T  38133090 ttaagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaagg 38133004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 18297836 - 18297917
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  18297836 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaagg 18297917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 18726967 - 18726886
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||| ||||| ||||||||||||||||    
T  18726967 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattaattggaatataaagatgaaaattttattccaagg 18726886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 26602286 - 26602203
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| ||| |||||  |||||||||||||||    
T  26602286 agggtgtgtttgtttcaagtttaccaaatttattgctagaaataacattccttgaaacataaagatgggaattttattccaagg 26602203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 32661283 - 32661200
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  32661283 agggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 32661200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 10896560 - 10896482
Alignment:
Q  170 gtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  10896560 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 10896482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 38363804 - 38363886
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  38363804 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 38363886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 33533743 - 33533655
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||  |||||||  |||||| |||||| ||||||||||||| ||||    
T  33533743 taagggtgtgtttgtttcaagtttgtcaaatttattcctaggaatattattcctttgaatataaagatgtgaattttattccaatgtat 33533655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 3049731 - 3049814
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||| |||||  |||||||||| ||||    
T  3049731 agggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttgaaatataaagatgggaattttattcgaagg 3049814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 5020846 - 5020754
Alignment:
Q  159 aaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||| || |||||||||||||||||||  ||||||||||| |||||||||||||| ||| |||||| |||||  |||||||||| |||||||    
T  5020846 aaatttagtgtgtgtttgtttcaagtttatcaaatttatttttaggaataacattctttggaatataaagatgataattttattctaaggtat 5020754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 41432464 - 41432544
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||| ||||||  ||||||||||| ||||||||||||| ||||||| ||| ||||| ||||||||||||||||    
T  41432464 gtgtgtttgttttaagtttatcaaatttatttttaggaataacatttcttgaaacataaagatggaaattttattccaagg 41432544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 42755592 - 42755672
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||  |||||  |||||||||||||||    
T  42755592 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatatgaagatgggaattttattccaagg 42755672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 25899381 - 25899467
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||| |  ||||||||||| |||||||||||||||||| |||||| ||||   |||||||||| |||||||    
T  25899381 agggtgtgtttgtttcaagtgtaacaaatttatttttaggaataacattccttggaatataaagataggaattttattctaaggtat 25899467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 37982143 - 37982081
Alignment:
Q  158 aaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaa 220  Q
    |||||| | |||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  37982143 aaaatttaaggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgaa 37982081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 242
Target Start/End: Original strand, 12649859 - 12649934
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttatt 242  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| |||||| |||| |  ||||| |||||||||    
T  12649859 ggtgtgtttgtttcaagtttaccaaatttatttctacgaataacaatccttgtaatacaatgatgtgaattttatt 12649934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 15226688 - 15226774
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||| ||||||||||| ||| |||||||||||  |||||||||| ||||||| |||||| |||||  ||||||||| ||||||||    
T  15226688 agggtgcgtttgtttcaattttaccaaatttattattaggaataactttccttggaatataaagatgagaattttatttcaaggtat 15226774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 31117874 - 31117789
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||||  ||||||||| | |||||||||||||| ||| |||||| |||||  ||||||||| ||| ||||    
T  31117874 gggtgtgtttgtttcaagtttatcaaatttatatttaggaataacattcattggaatataaagatgagaattttatttcaaagtat 31117789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 34672074 - 34672143
Alignment:
Q  156 ttaaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatata 225  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||| ||| ||||||| |||||||||||||    
T  34672074 ttaaaatttagggtgtgtttgttttaagtttatcaaatttatttttagaaataacagtccttgaaatata 34672143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 40197404 - 40197319
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||| |||||| ||||||||| ||||||||||| |||||||||| |||| ||| |||||| |||||  |||||||||| ||||    
T  40197404 taagggtttgtttgcttcaagtttaccaaatttattcctaggaataatattctttggaatataaagatgggaattttattctaagg 40197319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 16219290 - 16219204
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||| ||||||  | |||||||| ||||||||||| ||||||| ||  || |||||  ||||||||||||||||||    
T  16219290 agggtgtgtttgttttaagtttatccaatttattcctaggaataacgttccttggaacttaaagatgagaattttattccaaggtat 16219204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 35394073 - 35394139
Alignment:
Q  158 aaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatat 224  Q
    |||||||||||||||||||||||||||||  ||||||||||  ||| |||||||||| ||| |||||    
T  35394073 aaaattaagggtgtgtttgtttcaagtttatcaaatttattcttagtaataacattctttggaatat 35394139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 6805946 - 6805889
Alignment:
Q  194 ttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||| || |||||||||||||||||||||| |||||  ||||||||||||||||||    
T  6805946 ttatttttaagaataacattccttgaaatataaagatgggaattttattccaaggtat 6805889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 1554692 - 1554620
Alignment:
Q  177 tttcaagtttgccaaatttatttctaggaataacattccttgaaatat-atagatgtaaattttattccaagg 248  Q
    |||||||||| |||||||||||  |||||||||||||||||| ||||| | |||||  |||||||||||||||    
T  1554692 tttcaagtttaccaaatttattcttaggaataacattccttggaatataaaagatgggaattttattccaagg 1554620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 33444969 - 33444885
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||| |  ||||||||  || |||||||||| | || |||||| ||||| |||||||||| ||||||||    
T  33444969 ggtgtgtttgtttcaagtttactgaatttattcataagaataacatttcatggaatataaagatgaaaattttatttcaaggtat 33444885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 251
Target Start/End: Original strand, 35394156 - 35394199
Alignment:
Q  208 aacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||| |||||  ||||||||||||||||||    
T  35394156 aacattccttgaaatataaagatgagaattttattccaaggtat 35394199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 41229017 - 41228976
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaat 207  Q
    ||||||||||||||||||||| ||||||||||| | ||||||    
T  41229017 gggtgtgtttgtttcaagtttaccaaatttattccaaggaat 41228976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 19161088 - 19161024
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatg 231  Q
    ||||||||||||||||||||  ||||||||||   | ||||||||||| ||| |||||| |||||    
T  19161088 ggtgtgtttgtttcaagtttatcaaatttattctcaagaataacattctttggaatataaagatg 19161024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 40569731 - 40569826
Alignment:
Q  156 ttaaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  40569731 ttaaaacttagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatatatatatgtaaattttattccaaggtat 40569826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 37192242 - 37192327
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  37192242 taagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaagg 37192327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 13760692 - 13760772
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  13760692 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaagg 13760772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 13790018 - 13790098
Alignment:
Q  171 tgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13790018 tgtttgtttcaagtttatcaaatttatttgtaggaataacattccttgaaatatatagatgtaaattttattctaaggtat 13790098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 4559279 - 4559364
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||| |||||  |||||||||||||||    
T  4559279 taagggtgtgtttgtttcaagtttaccaaatttatttctaagaataacattccttggaatataaagatgggaattttattccaagg 4559364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 17965707 - 17965788
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  17965707 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaagg 17965788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 346694 - 346611
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  346694 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 346611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 6171513 - 6171596
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  6171513 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 6171596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 11071327 - 11071410
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| |||||  |||||||||||||||    
T  11071327 agggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgggaattttattccaagg 11071410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 37233155 - 37233238
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  37233155 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggtat 37233238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 2050586 - 2050671
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||| |||||  |||||||||||||||    
T  2050586 taagggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaagg 2050671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 3902182 - 3902261
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||| |||||  ||||||||||||||    
T  3902182 gtgtgtttgtttcaagtttaccatatttatttttaggaataacattccttgaaatataaagatgggaattttattccaag 3902261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 14777847 - 14777764
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  14777847 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 14777764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 28312042 - 28311959
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  28312042 gtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaagatgggaattttattccaaggtat 28311959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 37533675 - 37533758
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| | |||||  |||||||||||||||    
T  37533675 agggtgtgtttgtttcaagtttactaaatttatttctaggaataacattccttggaataaaaagatgggaattttattccaagg 37533758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 41729479 - 41729396
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| |||||  |||||||||||||||    
T  41729479 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaagg 41729396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 42675014 - 42674927
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| |||||| ||||   |||||||||||||||    
T  42675014 attaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacatttcttggaatataaagataggaattttattccaagg 42674927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 5770458 - 5770376
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| ||||   |||||||||||||||    
T  5770458 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagataggaattttattccaagg 5770376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 9734190 - 9734112
Alignment:
Q  170 gtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  9734190 gtgtttgttttaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaagg 9734112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 21737764 - 21737674
Alignment:
Q  158 aaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| | |||  |||||||||||||||    
T  21737764 aaaattaaggatgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaagg 21737674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 23943885 - 23943962
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttatt 242  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||    
T  23943885 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 23943962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 40951208 - 40951127
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaa 246  Q
    ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  40951208 agggtatgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaatataaagatgaaaattttattccaa 40951127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 5003182 - 5003098
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||| || ||| |||||||||||| |||||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  5003182 ggtgtgtttgtttaaaatttaccaaatttatttataggaataacattccttggaatataaagatgcgaattttattccaaggtat 5003098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 638318 - 638399
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||| || |||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  638318 ggtgtgtttgatttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 638399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 20426830 - 20426745
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||| |||||  ||||||||| ||| ||||    
T  20426830 gggtgtgtttgtttaaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatttcaatgtat 20426745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 45693909 - 45693994
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||| |||||||||||||||||| |||||||||||  |||||||||||||||||| || ||| |||||  |||||||||||||||    
T  45693909 taaggatgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaacataaagatgagaattttattccaagg 45693994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 14832536 - 14832612
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattcc 244  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||||| |||||  |||||||||||    
T  14832536 gtgtgtttgtttcaagtttaccaaatttatttccaagaataacattccttaaaatataaagatgataattttattcc 14832612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 39819414 - 39819498
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||| ||| |||||||||||  |||||||||||||| ||| |||||| ||||| |||||||||||| ||||||    
T  39819414 ggtgtgtttgtttcaaatttaccaaatttattcataggaataacattctttggaatataaagatggaaattttattcccaggtat 39819498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 7007307 - 7007385
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    ||||||||||||||| |||||| |||||||||||  ||||||||||||| ||||||||||| |||||  ||||||||||    
T  7007307 agggtgtgtttgttttaagtttaccaaatttattattaggaataacatttcttgaaatataaagatgagaattttattc 7007385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 11763737 - 11763663
Alignment:
Q  177 tttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||| |||||||||||  |||||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  11763737 tttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggtat 11763663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 18714005 - 18713923
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||| |||||| || |||||||||||| |||||||||||||||||| |||||| |||||  ||| ||||||||||    
T  18714005 agggtgtgtttgattcaagcttaccaaatttatttataggaataacattccttggaatataaagatgagaatattattccaag 18713923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 26309993 - 26310071
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||| |||||  ||||||||| ||||    
T  26309993 tgtgtttgtttcaagtttaccaaatttattcctaggaatagcattccttggaatataaagatgggaattttattacaag 26310071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 3254437 - 3254355
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||| |||||| |||||||||||| |||||||||||||| ||| |||||| | |||  |||||||||| |||||||    
T  3254437 tgtgtttgttttaagtttaccaaatttatttttaggaataacattctttggaatataaaaatgagaattttattctaaggtat 3254355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 4875506 - 4875584
Alignment:
Q  173 tttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||| ||||||||||  ||||||||| |||| ||| |||||| |||||| ||||||||||||| ||||    
T  4875506 tttgtttcaagtttgtcaaatttattcttaggaataatattctttggaatataaagatgtgaattttattccaatgtat 4875584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 45408981 - 45409059
Alignment:
Q  173 tttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||| |||||| ||||||||||| ||||||||||||||  ||| |||||| |||||  ||||||||||||||||||    
T  45408981 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttattccaaggtat 45409059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 2521381 - 2521433
Alignment:
Q  173 tttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatata 225  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  2521381 tttgtttcaagtttaccaaatttattcctaggaataacattccttggaatata 2521433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 27358303 - 27358225
Alignment:
Q  173 tttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||| |||||| ||||||||||| ||||||||||||||  ||| |||||| |||||  ||||||||| ||||||||    
T  27358303 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttatttcaaggtat 27358225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 41750276 - 41750334
Alignment:
Q  190 aaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||| |||||||||||||||||||||||||| |||||  ||||||||| |||||    
T  41750276 aaatttattcctaggaataacattccttgaaatataaagatgggaattttatttcaagg 41750334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 36590924 - 36590843
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatataga-tgtaaattttattc 243  Q
    |||| ||| |||||||| |||||| | |||||||||| |||||||||||||| ||| |||||||| | ||||||||||||||    
T  36590924 taagagtgagtttgttttaagtttactaaatttatttttaggaataacattcgttggaatatatatattgtaaattttattc 36590843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 1623078 - 1623156
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||||| ||| | ||||||||| |||| ||||||||| |||| |||||| |||||  ||||||||| ||||    
T  1623078 tgtgtttgtttcaattttactaaatttattcctagtaataacatttcttggaatataaagatgagaattttatttcaag 1623156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 2521434 - 2521480
Alignment:
Q  202 aggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  2521434 aggaataacattccttggaatataaagatggaaattttattccaagg 2521480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 14403564 - 14403495
Alignment:
Q  156 ttaaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatata 225  Q
    |||||||| |||||| |||||||| ||||||  ||||||||||| ||| ||||||| | |||||||||||    
T  14403564 ttaaaatttagggtgagtttgttttaagtttatcaaatttatttttagaaataacagttcttgaaatata 14403495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 25444922 - 25444999
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttatt 242  Q
    ||||||||| ||||| ||||||| |||||||||||  ||||||||||||  ||| |||||| |||||  |||||||||    
T  25444922 agggtgtgtatgttttaagtttgtcaaatttattttaaggaataacattttttggaatataaagatgataattttatt 25444999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 14253254 - 14253325
Alignment:
Q  171 tgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttatt 242  Q
    ||||||||| || ||| |||||||||||| |||||||||||||| ||| ||||||  ||||  |||||||||    
T  14253254 tgtttgttttaaatttaccaaatttatttttaggaataacattctttggaatataaggatgagaattttatt 14253325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 27357953 - 27357982
Alignment:
Q  156 ttaaaattaagggtgtgtttgtttcaagtt 185  Q
    ||||||||||||||||||||||||||||||    
T  27357953 ttaaaattaagggtgtgtttgtttcaagtt 27357982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 41298239 - 41298186
Alignment:
Q  189 caaatttatttctaggaataacattccttgaaatatatagatgtaaattttatt 242  Q
    ||||||||||| |||||||||||||| ||| |||||| |||||  |||||||||    
T  41298239 caaatttatttttaggaataacattcattggaatataaagatgagaattttatt 41298186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 45212678 - 45212735
Alignment:
Q  189 caaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaa 246  Q
    ||||||||||| ||||||| |||||| ||||||| || |||||  |||||||||||||    
T  45212678 caaatttatttttaggaattacattctttgaaatgtaaagatgagaattttattccaa 45212735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 185
Target Start/End: Complemental strand, 45409331 - 45409302
Alignment:
Q  156 ttaaaattaagggtgtgtttgtttcaagtt 185  Q
    ||||||||||||||||||||||||||||||    
T  45409331 ttaaaattaagggtgtgtttgtttcaagtt 45409302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 17276510 - 17276426
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17276510 taagggtgtgtttgtttcaattttacaaaatttatttctaggaataacattccttggaatatatagatgtaaattttattccaag 17276426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 9947342 - 9947257
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  9947342 taagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgtaatataaagatgggaattttattccaagg 9947257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 11329711 - 11329798
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  11329711 attaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 11329798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 28904542 - 28904452
Alignment:
Q  158 aaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||| ||||    
T  28904542 aaaattaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaagg 28904452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 35488545 - 35488455
Alignment:
Q  158 aaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  35488545 aaaattatgggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 35488455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 33378554 - 33378639
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  33378554 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 33378639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 45265402 - 45265314
Alignment:
Q  160 aattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  45265402 aattaagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 45265314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 45722877 - 45722961
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattcca 245  Q
    ||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||    
T  45722877 attaagggtgtctttatttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatggaaattttattcca 45722961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 44565767 - 44565850
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  44565767 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaagg 44565850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 27214203 - 27214121
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  27214203 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 27214121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 34930814 - 34930733
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  34930814 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 34930733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 43948965 - 43949050
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  43948965 taagggtgtatttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 43949050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 48160927 - 48160839
Alignment:
Q  160 aattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||| ||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  48160927 aattaggggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 48160839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 27248011 - 27248098
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||| |||||  |||||||||||||||    
T  27248011 attaaggatgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttattccaagg 27248098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 25924989 - 25924903
Alignment:
Q  162 ttaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||| |||||| |||||  |||||||||||||||    
T  25924989 ttaagggtgtgtttgtttcatgtttaccaaatttattcctaagaataacattccttggaatataaagatgagaattttattccaagg 25924903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 30686336 - 30686254
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  30686336 tgtgtttgttttaagtttatcaaatttatttctaggaataacattccttggaatataaagatgaaaattttattgcaaggtat 30686254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 44819981 - 44820059
Alignment:
Q  170 gtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||  |||||||||||||||    
T  44819981 gtgtttgtttcaagtttaccaaatttatttttaggaataacattccttaaaatataaagatgagaattttattccaagg 44820059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 48313842 - 48313927
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||| |||||  |||||||||| ||||    
T  48313842 taagggtgtgtttgtttcaagtttatcaaatttatttctaggaataacatttcttggaatataaagatgagaattttattctaagg 48313927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 27419571 - 27419492
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaa 246  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||| |||| |||||| |||||  |||||||||||||    
T  27419571 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacatttcttggaatataaagatgggaattttattccaa 27419492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 48341086 - 48341168
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||| |  |||||||||||||||    
T  48341086 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaga-gggaattttattccaagg 48341168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 37534447 - 37534365
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||| |||||| |||||  ||||||||| ||||||||    
T  37534447 tgtgtttgtttcaagtttatcaaatttatttctagaaataacattccttggaatataaagatgagaattttatttcaaggtat 37534365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 45448665 - 45448742
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||| |||||  ||||||||||    
T  45448665 gggtgtgtttgtttcaagtttaccaaatttattcctatgaataacattccttggaatataaagatgggaattttattc 45448742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 18823890 - 18823970
Alignment:
Q  171 tgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||| |||||  |||||||||| |||||||    
T  18823890 tgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattctaaggtat 18823970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 45045352 - 45045431
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||| |||||||||||  ||||||||| |||||||| |||||| |||||  |||||||||||||||    
T  45045352 tgtgtttgtttcaagtttaccaaatttattcttaggaataatattccttggaatataaagatgggaattttattccaagg 45045431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 16916236 - 16916182
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattcctt 217  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16916236 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattcctt 16916182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 5543485 - 5543401
Alignment:
Q  159 aaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||| ||||| ||||  |||||| ||| |||||  ||||||||||    
T  5543485 aaatttagggtgtgtttgttttaagtttaccaaatttatttctaagaatatcattatttgaaacataaagatgagaattttattc 5543401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 38396714 - 38396632
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||  |||||||||| ||||||||| ||||| ||| |||||| ||||   |||||||||||||||    
T  38396714 agggtgtgtttgtttcaagtttatcaaatttattcctaggaatagcattcattggaatata-agataggaattttattccaagg 38396632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 31598449 - 31598531
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||| |||||| |||||||||||| | ||||||||||| |||| |||||| ||||   ||||||||| ||||||||    
T  31598449 tgtgtttgttttaagtttaccaaatttatttttgggaataacatttcttggaatataaagataggaattttatttcaaggtat 31598531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 38543920 - 38543998
Alignment:
Q  170 gtgtttgtttcaa-gtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    ||||||||||||| |||| | |||||||||  |||||||||||||||||| |||||| |||||  ||||||||||||||    
T  38543920 gtgtttgtttcaaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaag 38543998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 41632711 - 41632630
Alignment:
Q  162 ttaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||||| |||||||||||      |||||||||||||  |||||| |||||  |||||||||||||||    
T  41632711 ttaagggtgtgtttgtttcaagtttaccaaatttatt-----caataacattcctttgaatataaagatgggaattttattccaagg 41632630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 39553910 - 39553987
Alignment:
Q  171 tgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||| ||||||  ||||||||||  ||| |||||||||||||| |||||| |||||  |||||||||||||||    
T  39553910 tgtttgtttgaagtttatcaaatttattcttagtaataacattccttggaatataaagatgggaattttattccaagg 39553987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 31922077 - 31921987
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagat--gtaaattttattccaaggtat 251  Q
    ||||||||||||||||||||||||  |||||||||| | | ||||||||||| ||| |||||| | ||  |  ||||||||||||||||||    
T  31922077 taagggtgtgtttgtttcaagtttatcaaatttattaccatgaataacattctttggaatataaatatgggagaattttattccaaggtat 31921987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 40212626 - 40212669
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaata 208  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  40212626 agggtgtgtttgtttcaagtttaccaaatttattcctaggaata 40212669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 6656819 - 6656733
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataa-cattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||| |||||||||| | |||||||||  ||||||||| ||||||||| |||| | | |||  ||||||||||||||||||    
T  6656819 gggtgtgtttctttcaagtttactaaatttattcttaggaataaacattccttggaatagaaatatgagaattttattccaaggtat 6656733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 45440637 - 45440713
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||||| |||| |||||||||||  ||| ||||||||| |||  |||||  |||||||||||||||||||||    
T  45440637 gtgtgtttgtttca-gtttaccaaatttattcatagtaataacatttcttagaatat--agatgtaaattttattccaag 45440713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 22156520 - 22156441
Alignment:
Q  172 gtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||| |||  ||||||||||| |||||||||||||  ||| |||||| ||||   |||||||||| |||||||    
T  22156520 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtat 22156441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 22212435 - 22212356
Alignment:
Q  172 gtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||| |||  ||||||||||| |||||||||||||  ||| |||||| ||||   |||||||||| |||||||    
T  22212435 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtat 22212356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 25097796 - 25097874
Alignment:
Q  171 tgtttgtttcaagtttgccaaatttatttctaggaataaca-ttccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||| |||||| ||||||||||| |||||||||| | ||  ||| |||||| |||||  |||||||||||||||    
T  25097796 tgtttgttttaagtttaccaaatttattcctaggaataatatttttttggaatataaagatgagaattttattccaagg 25097874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 8419900 - 8419856
Alignment:
Q  203 ggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||||||| |||||| |||||  ||||||||||||||    
T  8419900 ggaataacattccttggaatataaagatgggaattttattccaag 8419856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 8476657 - 8476574
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  8476657 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatggaaattttattccaagg 8476574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 40907986 - 40908071
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||    
T  40907986 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaagg 40908071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 11239476 - 11239386
Alignment:
Q  158 aaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  11239476 aaaactaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 11239386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 10823068 - 10822980
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||| |||||  ||||||||||||||||||    
T  10823068 taagggtgtgtttgtttcaagtttagcaaatttatttctaggaataacattccttacaatataaagatgagaattttattccaaggtat 10822980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 24574289 - 24574372
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| |||||  |||||||||||||||    
T  24574289 agggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgagaattttattccaagg 24574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 26848744 - 26848827
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  26848744 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 26848827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 33218262 - 33218179
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  33218262 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 33218179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 48340108 - 48340023
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||| |||||  |||||||||||||||    
T  48340108 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttattccaagg 48340023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 43719271 - 43719191
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || ||  |||||||||||||||    
T  43719271 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagttgagaattttattccaagg 43719191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 248
Target Start/End: Original strand, 46359673 - 46359757
Alignment:
Q  164 aagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  46359673 aagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 46359757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 6231850 - 6231767
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||| ||||   |||||||||||||||    
T  6231850 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagataggaattttattccaagg 6231767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 20414812 - 20414733
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaa 246  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||    
T  20414812 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaa 20414733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 44952030 - 44952113
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| |||||  |||||||||||||||    
T  44952030 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaagg 44952113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 47115202 - 47115123
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  47115202 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 47115123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 53166073 - 53165987
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||||||  | |||||||||||| |||||||||||||||||||||| |||||   |||||||||||||||||    
T  53166073 agggtgtgtttgtttcaagtttatccaatttatttctaagaataacattccttgaaatataaagatgggtattttattccaaggtat 53165987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 1098923 - 1099004
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| |||||  |||||||||||||||    
T  1098923 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaagg 1099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 6832273 - 6832185
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||| ||| ||||||||||| ||| |||||||||| |||| |||||| |||||  ||||||||||||||||||    
T  6832273 taagggtgtgtttgtttcaaatttaccaaatttattcctaagaataacattacttggaatataaagatgagaattttattccaaggtat 6832185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 43132502 - 43132419
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||| | |||||||||  |||||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  43132502 gtgtgtttgtttcaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggtat 43132419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 28770557 - 28770472
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||| || |||  ||||  ||||||||||||||||||    
T  28770557 gggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaacataatgatgagaattttattccaaggtat 28770472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 26849492 - 26849408
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||| |||||| |||||||||||| ||||||||| ||| |||| |||||| ||||| |||||||||| ||||||||    
T  26849492 ggtgtgtttgttttaagtttaccaaatttatttttaggaataatatttcttggaatataaagatggaaattttatttcaaggtat 26849408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 24783934 - 24784017
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||||||| |||||| |||||  |||||||||| |||||||    
T  24783934 gtgtgtttgtttcaagtttaccaaatttattcataagaataacattccttggaatataaagatgagaattttattctaaggtat 24784017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 31611330 - 31611251
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||| |||||||||||  || ||||||||||||||| |||||| |||||  |||||||||||||||    
T  31611330 tgtgtttgtttcaagtttaccaaatttattcttatgaataacattccttggaatataaagatgggaattttattccaagg 31611251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 38140710 - 38140631
Alignment:
Q  172 gtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||| |||   ||||||||||||||||||||||||||||| |||||| || ||| ||||||||||||||||||    
T  38140710 gtttgtttcaattttataaaatttatttctaggaataacattccttggaatataaaggtgtgaattttattccaaggtat 38140631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 6927817 - 6927899
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||| ||||||  |||||||||| ||||||||||||||||||| |||||| |||||  |||||||||| |||||||    
T  6927817 tgtgtttgttttaagtttatcaaatttattactaggaataacattccttggaatataaagatgagaattttattctaaggtat 6927899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 20297508 - 20297598
Alignment:
Q  158 aaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||| ||||||||||||||||| |||||| |||||||||||  |||||||||||||| ||| |||||| |||||  ||||||||| |||||    
T  20297508 aaaactaagggtgtgtttgttttaagtttaccaaatttattcttaggaataacattctttggaatataaagatgggaattttatttcaagg 20297598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 28124779 - 28124702
Alignment:
Q  171 tgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||| |||||| | |||  |||||||||||||||    
T  28124779 tgtttgtttcaagtttaccaaatttatttttaggattaacattccttggaatataaatatgagaattttattccaagg 28124702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 29512324 - 29512404
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||  |||||| |||||  ||||||||| ||||    
T  29512324 ggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttatttcaag 29512404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 9320797 - 9320719
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattcc 244  Q
    |||||||||||||||||||||   |||||||||  |||||||||||||||||| |||||| |||||  |||||||||||    
T  9320797 gggtgtgtttgtttcaagtttatgaaatttattcataggaataacattccttggaatataaagatgagaattttattcc 9320719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 31436275 - 31436185
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||| |||||||||||||||||||| ||||||||||| || | |||||||||| ||  |||||| ||||   ||||||||||||||||||    
T  31436275 attaaaggtgtgtttgtttcaagtttaccaaatttattcctggaaataacattctttagaatataaagataggaattttattccaaggtat 31436185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 27822994 - 27823042
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattc 214  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  27822994 gggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattc 27823042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 33650357 - 33650277
Alignment:
Q  171 tgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||| |||||||||||| || ||||||||||  ||||||| || |||||  |||||||||| |||||||    
T  33650357 tgtttgtttcaagtttaccaaatttatttttatgaataacattatttgaaatctaaagatgagaattttattctaaggtat 33650277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 40584336 - 40584419
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||| |  |||||||||| ||| |||||||||||||| ||||||| ||||   ||||||||| ||||||||    
T  40584336 gtgtgtttgtttcaagtgtaacaaatttattcctaagaataacattccttcaaatataaagataggaattttatttcaaggtat 40584419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 251
Target Start/End: Original strand, 49216027 - 49216108
Alignment:
Q  170 gtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||| |||||| ||||| |||||  |||||||||  ||||||| |||||| |||||  ||||||||||||||||||    
T  49216027 gtgtttgttttaagttttccaaaattattcttaggaataatgttccttggaatataaagatgggaattttattccaaggtat 49216108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 12228601 - 12228517
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||| |||||||  ||||||||||  | |||||||||||  |||||||||| |||||  |||||||||| |||||||    
T  12228601 ggtgtgtttgttacaagtttatcaaatttattcttgggaataacattatttgaaatataaagatgagaattttattctaaggtat 12228517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 32070994 - 32071078
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||| |||||||| || |||  |||||||||| ||| |||||||||| |||| |||||| |||||  ||||||||||||||||||    
T  32070994 ggtgggtttgttttaaatttatcaaatttattcctatgaataacatttcttggaatataaagatgagaattttattccaaggtat 32071078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 18460582 - 18460661
Alignment:
Q  172 gtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||  |||||||||||||| ||||||||||  | |||||||| |||||  ||||| ||| ||||||||    
T  18460582 gtttgtttcaagtttatcaaatttatttctacgaataacatttttcgaaatataaagatgagaatttgattacaaggtat 18460661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 2566524 - 2566475
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttg 218  Q
    |||||||||||||||||| |||||||||||||| | ||||| ||||||||    
T  2566524 tgtgtttgtttcaagtttaccaaatttatttcttgaaataatattccttg 2566475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 31267694 - 31267610
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||| ||||||  |  |||||||| ||||||||||||| ||| ||||||| |||||| ||||| |||  |||||||    
T  31267694 ggtgtgtttgttttaagtttatcggatttatttttaggaataacatttcttaaaatataaagatgtgaatttcattttaaggtat 31267610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 198
Target Start/End: Original strand, 19532909 - 19532944
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatt 198  Q
    |||||||||||||||||||||||| |||||||||||    
T  19532909 taagggtgtgtttgtttcaagtttaccaaatttatt 19532944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 28693782 - 28693724
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaa 221  Q
    |||||||||||||||||||| ||| | ||||||||| |||| |||||  ||||||||||    
T  28693782 taagggtgtgtttgtttcaaatttactaaatttattcctagaaataattttccttgaaa 28693724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 28429450 - 28429536
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  28429450 agggtgtgtttgtttcaagtttaccaaatttatttctagaaataacattccttgaaatataaagatgtgaattttattccaaagtat 28429536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 6091434 - 6091520
Alignment:
Q  162 ttaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  6091434 ttaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 6091520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 22936263 - 22936178
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  22936263 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 22936178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 8406616 - 8406699
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  8406616 agggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaagg 8406699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 12970879 - 12970796
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  12970879 agggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaagg 12970796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 18411931 - 18412014
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  18411931 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 18412014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 29543364 - 29543281
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  29543364 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 29543281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 556053 - 555972
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  556053 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 555972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 28602276 - 28602361
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| ||||   |||||||||||||||    
T  28602276 taagggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagataggaattttattccaagg 28602361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 11856001 - 11855921
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  11856001 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 11855921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 27481082 - 27481162
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  27481082 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 27481162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 4765909 - 4765826
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||| ||||    
T  4765909 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaagg 4765826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 19065850 - 19065771
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  19065850 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 19065771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 26637370 - 26637284
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||| ||||||||||  ||||||||||| |||||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  26637370 agggtgtgtttatttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggtat 26637284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 248
Target Start/End: Original strand, 32535658 - 32535742
Alignment:
Q  164 aagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| |||||  ||||||| |||||||    
T  32535658 aagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttaatccaagg 32535742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 14207176 - 14207087
Alignment:
Q  159 aaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||| |||||||||||||||||||||| | ||||||||| ||||||||||||||| ||| |||||| |||||  ||||||||| |||||    
T  14207176 aaatttagggtgtgtttgtttcaagtttacaaaatttattcctaggaataacattcattggaatataaagatgagaattttatttcaagg 14207087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 8646735 - 8646656
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||| ||||   |||||||||||||||    
T  8646735 tgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagataggaattttattccaagg 8646656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 27480735 - 27480819
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||| ||| |||||| |||||||||||| ||||||||| ||| ||||||||||| |||||  ||||||||| ||||||||    
T  27480735 ggtgtgtttattttaagtttaccaaatttatttttaggaataatatttcttgaaatataaagatgagaattttatttcaaggtat 27480819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 1664456 - 1664539
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||| ||||||||||| ||  |||||| ||| ||||||||||| |||||  ||||||||| ||||||||    
T  1664456 gtgtgtttgtttcaagtttaccaaatttattcctgagaataatatttcttgaaatataaagatgagaattttatttcaaggtat 1664539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 36703506 - 36703587
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||| ||| |||||||||||  |||||||||||||||||| ||| || |||||  ||||||||| |||||    
T  36703506 ggtgtgtttgtttcaaatttaccaaatttattcataggaataacattccttggaatttaaagatgagaattttatttcaagg 36703587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 6930362 - 6930450
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||| ||||||  ||||||||||  || |||||||||||||||||||||  |||||  |||||||||  |||||||    
T  6930362 taagggtgtgtttgttttaagtttatcaaatttattcatatgaataacattccttgaaatatcaagatgagaattttattttaaggtat 6930450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 16721029 - 16720957
Alignment:
Q  171 tgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    |||||||||||||||| | ||||||||| ||||||||||||||| ||| |||||| | |||| ||||||||||    
T  16721029 tgtttgtttcaagtttactaaatttattcctaggaataacattcattggaatataaaaatgtgaattttattc 16720957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 31583404 - 31583326
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    ||||||||||| |||||| | ||||||||||||| ||||||||||| |||||| ||| ||||| |||| ||||| ||||    
T  31583404 tgtgtttgttttaagtttactaaatttatttctacgaataacattctttgaaacataaagatggaaatattatttcaag 31583326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 43347243 - 43347157
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||||| | |||||||||  |||||||||||||  ||| |||||| |||||  || ||||||| |||||||    
T  43347243 agggtgtgtttgtttcaagttttcgaaatttattcttaggaataacatttattggaatataaagatgagaagtttattctaaggtat 43347157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 20962272 - 20962356
Alignment:
Q  156 ttaaaatta-agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaatttt 239  Q
    ||||||||| ||| ||||||||||| ||||||  ||||||||||  |||||||||||||||||| || ||| ||||| |||||||    
T  20962272 ttaaaattataggatgtgtttgttttaagtttatcaaatttattcataggaataacattccttggaacataaagatggaaatttt 20962356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 42012530 - 42012447
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||  ||| |||| | |||||  |||||| ||| |||||||    
T  42012530 gtgtgtttgtttcaagtttactaaatttatttttaggaataacattttttggaataaaaagatgggaattttgttctaaggtat 42012447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 17251534 - 17251621
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||| ||| ||||||||||| |||  ||||||||| |||| ||||||  |||   |||||| |||||||||||    
T  17251534 taagggtgtgtttgtttcaaatttaccaaatttattccta-caataacatttcttggaatataaggataggaatttttttccaaggtat 17251621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 35603124 - 35603045
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    |||||||||||||| ||||||| | ||||||| |||| |||||||||||||  ||| |||||| ||||  |||||||||||    
T  35603124 taagggtgtgtttggttcaagtgtaccaaatt-atttttaggaataacattttttggaatataaagatagaaattttattc 35603045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 36978478 - 36978396
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||   |||||||||| |||||||||||||| ||  |||||| | |||  |||||||||  |||||||    
T  36978478 tgtgtttgtttcaagtttattaaatttatttataggaataacattctttagaatataaatatgagaattttattttaaggtat 36978396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 40276587 - 40276534
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaa 220  Q
    |||||||||||||||||||| | |||||||||  | | ||||||||||||||||    
T  40276587 ggtgtgtttgtttcaagtttactaaatttattcttggtaataacattccttgaa 40276534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 43722985 - 43723071
Alignment:
Q  160 aattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaa 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||    
T  43722985 aattaagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaa 43723071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 25932165 - 25932250
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||    
T  25932165 taagggtgtgtttgtttcaagtttcccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaagg 25932250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 47670086 - 47670171
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  47670086 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 47670171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 55968351 - 55968266
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  55968351 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 55968266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 13230338 - 13230255
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  13230338 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 13230255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 18405587 - 18405504
Alignment:
Q  160 aattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| ||||| |||||||||||    
T  18405587 aattaagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatggaaattttattc 18405504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 23686513 - 23686596
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| |||||  |||||||||||||||    
T  23686513 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgaaatataaagatgggaattttattccaagg 23686596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 27555149 - 27555236
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  27555149 attaagggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 27555236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 39835656 - 39835573
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||| |||||  |||||||||||||||    
T  39835656 agggtgtgtttgtttcaagtttaccaaatttatttctatgaataacattccttggaatataaagatgggaattttattccaagg 39835573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 45748144 - 45748061
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  45748144 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 45748061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 41859398 - 41859312
Alignment:
Q  162 ttaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  ||||||||| |||||    
T  41859398 ttaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatttcaagg 41859312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 40435628 - 40435709
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| |||||  |||||||||||||||    
T  40435628 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaagg 40435709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 41744568 - 41744487
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| |||||  |||||||||||||||    
T  41744568 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattcattggaatataaagatgagaattttattccaagg 41744487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 45595992 - 45596077
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| |||||  |||||||||||||||    
T  45595992 taagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaagg 45596077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 48519233 - 48519157
Alignment:
Q  172 gtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||| |||||||||||||||    
T  48519233 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgtgaattttattccaagg 48519157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 39730642 - 39730559
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  39730642 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 39730559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 48873747 - 48873830
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  ||| |||||||||||    
T  48873747 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaagg 48873830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 48879051 - 48879134
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  ||| |||||||||||    
T  48879051 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaagg 48879134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 31938217 - 31938132
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||||  ||||||||||  |||||||||||||||||| ||| || ||||| |||||||||||||||||||    
T  31938217 gggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttggaatttaaagatgaaaattttattccaaggtat 31938132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 18405127 - 18405195
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatg 231  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  18405127 taagggtgtgtttgttttaagtttgccaaatttattcttaggaataacattccttgaaatataaagatg 18405195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 8321971 - 8322054
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| ||| |||||| |||||  ||||||||| |||||    
T  8321971 agggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattctttggaatataaagatgagaattttattacaagg 8322054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 50673245 - 50673170
Alignment:
Q  173 tttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||    
T  50673245 tttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagatgagaattttattccaagg 50673170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 27763246 - 27763165
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| ||||   |||||||||||||||    
T  27763246 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagataggaattttattccaagg 27763165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 243
Target Start/End: Complemental strand, 36860104 - 36860027
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || ||| | ||| |||||||||||    
T  36860104 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaacataaaaatggaaattttattc 36860027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 42773672 - 42773757
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||| ||||||||||||||||| ||||||||||| |||| |||||||||||||| | |||| |||||  |||||||||||||||    
T  42773672 taagggcgtgtttgtttcaagtttaccaaatttattcctagaaataacattccttggagtataaagatgggaattttattccaagg 42773757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 6280275 - 6280187
Alignment:
Q  160 aattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||| |||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| | ||   |||||||||||||||    
T  6280275 aatttagggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaaaataggaattttattccaagg 6280187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 35999412 - 35999495
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||| |||||||||||||||| |||||||||||  || ||||||||||||||| |||||| |||||  |||||||||||||||    
T  35999412 agggtttgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaagatgggaattttattccaagg 35999495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 38413902 - 38413988
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| |||||| |||||  ||||| ||||||||||||    
T  38413902 agggcgtgtttgtttcaagtttaccaaatttaattttagaaataacattccttggaatataaagatgagaatttaattccaaggtat 38413988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 51968505 - 51968591
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||   |  || |||||  ||||||||||||||||||    
T  51968505 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttcgtacgtaaagatgagaattttattccaaggtat 51968591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 7258691 - 7258776
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||||  ||||||||||   ||||||||||||||||| |||||| | |||  ||||||||||||||||||    
T  7258691 gggtgtgtttgtttcaagtttatcaaatttattctcaggaataacattccttggaatataaatatgggaattttattccaaggtat 7258776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 18931482 - 18931562
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||| ||||||  ||||||||||  |||||||||||||||||| |||||| ||||  ||||||||||||||||    
T  18931482 gtgtgtttgttttaagtttatcaaatttattcttaggaataacattccttggaatataaagatagaaattttattccaagg 18931562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 935850 - 935933
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaa 246  Q
    |||||||||||||||||||||||| |||||||||||  || |||||||||| |||| |||||| ||||   |||||||||||||    
T  935850 taagggtgtgtttgtttcaagtttaccaaatttattcttaagaataacatttcttggaatataaagataggaattttattccaa 935933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 34238295 - 34238220
Alignment:
Q  173 tttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||  ||||||||||  |||||||||||||||||| |||||| |||||  |||||||||||||||    
T  34238295 tttgtttcaagtttatcaaatttattcataggaataacattccttggaatataaagatgagaattttattccaagg 34238220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 30790275 - 30790359
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||| |||| |||||| |||||  || |||||||||| ||||    
T  30790275 gggtgtgtttgtttcaagtttagcaaatttatttctaggagtaacatt-cttggaatataaagatgagaaatttattccaaagtat 30790359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 25916362 - 25916302
Alignment:
Q  165 agggtgtgtttgtttc-aagtttgccaaatttatttctaggaataacattccttgaaatat 224  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||    
T  25916362 agggtgtgtttgtttctaagtttaccaaatttattcctaggaataacattccttggaatat 25916302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 10401126 - 10401047
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||| |||||| |||||||||||||| | |||||||||| ||||| |||| | |||  ||||||||||||||    
T  10401126 gtgtgtttgttttaagtttaccaaatttatttctggaaataacattctttgaagtataaaaatgagaattttattccaag 10401047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 32953249 - 32953332
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||| ||||||||||||||||  | ||||||||||||| ||||| |||| ||| |||||| |||||  |||||||||||||||    
T  32953249 agggtatgtttgtttcaagtttatctaatttatttctagaaataatattcattggaatataaagatgggaattttattccaagg 32953332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 27942465 - 27942511
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacatt 213  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  27942465 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacatt 27942511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 12276260 - 12276182
Alignment:
Q  164 aagggtgtg-tttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttatt 242  Q
    ||||||||| |||||||||||||| | |||||||||| |||||||||||||  ||| |||||| |||||| |||||||||    
T  12276260 aagggtgtgatttgtttcaagtttactaaatttatttataggaataacattttttg-aatataaagatgtgaattttatt 12276182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 47426567 - 47426521
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacat 212  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  47426567 gggtgtgattgtttcaagtttaccaaatttatttttaggaataacat 47426521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 38394634 - 38394719
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| ||| |||  || ||| | |||  ||||||||| ||||||||    
T  38394634 gggtgtgtttgtttcaagtttaccaaatttatttctaagactaatatttcttagaacataaatatgagaattttatttcaaggtat 38394719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 32713384 - 32713434
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttga 219  Q
    ||||||||||| ||||||| ||||||||||||||  |||||| ||||||||    
T  32713384 tgtgtttgttttaagtttgtcaaatttatttctaaaaataacgttccttga 32713434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 37296473 - 37296518
Alignment:
Q  203 ggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||| |||||| | |||| |||||||||||||||    
T  37296473 ggaataacattccttggaatataaatatgtgaattttattccaagg 37296518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 52413959 - 52414035
Alignment:
Q  171 tgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||| ||||| ||| |||||||||||  ||| |||||||  ||||| |||||| |||||| ||||||||| ||||    
T  52413959 tgtttgcttcaaatttaccaaatttattcttagaaataacaacccttggaatataaagatgtgaattttatttcaag 52414035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 52630494 - 52630579
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  52630494 taagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaagg 52630579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 1597694 - 1597608
Alignment:
Q  162 ttaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||  |||||||||||||||    
T  1597694 ttaaaggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatgggaattttattccaagg 1597608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 5806625 - 5806542
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  5806625 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 5806542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 6911208 - 6911291
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  6911208 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 6911291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 47031582 - 47031665
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  47031582 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 47031665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 51445424 - 51445345
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  51445424 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatatatagatgagaattttattccaagg 51445345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 9115561 - 9115643
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  9115561 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaagg 9115643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 25789487 - 25789569
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  25789487 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaagg 25789569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 29091395 - 29091481
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||| |||||  ||||||||||||||||||    
T  29091395 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttaaaatataaagatgggaattttattccaaggtat 29091481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 20260434 - 20260353
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  ||||||||||||||    
T  20260434 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag 20260353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 8331735 - 8331818
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaa 246  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||    
T  8331735 taagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaa 8331818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 36361506 - 36361589
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| | |||  |||||||||||||||    
T  36361506 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaaatgggaattttattccaagg 36361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 46666431 - 46666514
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||| ||||    
T  46666431 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaagg 46666514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 14788439 - 14788529
Alignment:
Q  158 aaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| |||||| |||||||||||  |||||||||||||||||| |||||| |||||  ||||||||| |||||    
T  14788439 aaaattaagggtgtgtttgttttaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatttcaagg 14788529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 25473977 - 25474059
Alignment:
Q  164 aagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaa 246  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||    
T  25473977 aagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaa 25474059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 38965027 - 38964945
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  38965027 gggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 38964945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 39930181 - 39930263
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||| |||||  |||||||||||||||    
T  39930181 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgggaattttattccaagg 39930263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 12190528 - 12190443
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||||  |||||||||| ||| ||||||||||||||| |||||| |||||  |||||||||||||||    
T  12190528 taagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaatataaagatgggaattttattccaagg 12190443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 32202660 - 32202580
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||| |||||  ||||||||||||||    
T  32202660 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaag 32202580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 13932218 - 13932135
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||| ||||| ||| |||||| ||||||||    
T  13932218 gtgtgtttgtttcaagtttatcaaatttatttcaaggaataacattcattgaaatataaagatggaaactttatttcaaggtat 13932135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 32824644 - 32824727
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||| ||| | ||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  32824644 agggtgtgtttgtttcaaatttacgaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 32824727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 50191113 - 50191036
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttatt 242  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||| |||||  |||||||||    
T  50191113 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttatt 50191036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 2430223 - 2430303
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||| | ||||||||| ||||||||||| ||||||| |||||| |||||  |||||||||||||||    
T  2430223 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttattccaagg 2430303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 9832216 - 9832136
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||| | |||||| |||||  |||||||||||||||    
T  9832216 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattcctcggaatataaagatgggaattttattccaagg 9832136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 48916368 - 48916285
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||  ||||||||||  |||||||||||||||||  |||||| |||||  ||||||||||||||||||    
T  48916368 gtgtgtttgtttcaagtttatcaaatttattcttaggaataacattccttagaatataaagatgagaattttattccaaggtat 48916285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 52699799 - 52699728
Alignment:
Q  180 caagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  52699799 caagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggtat 52699728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 1228225 - 1228147
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaa 246  Q
    |||||||||||| |||||| ||||||||||||||| ||||||| ||||||| |||||| |||||  |||||||||||||    
T  1228225 gtgtgtttgttttaagtttaccaaatttatttctatgaataaccttccttggaatataaagatgagaattttattccaa 1228147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 2632570 - 2632656
Alignment:
Q  159 aaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattcca 245  Q
    ||||| ||||||| |||||||||||||| | ||||||||||||||||||||||||||||  |||||| | |||  ||||||||||||    
T  2632570 aaatttagggtgtatttgtttcaagtttactaaatttatttctaggaataacattccttagaatataaatatgggaattttattcca 2632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 5518852 - 5518766
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||| ||||||||| |||||| |||||||||||  | |||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  5518852 agggtctgtttgtttgaagtttaccaaatttattcattggaataacattccttggaatataaagatgggaattttattccaaggtat 5518766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 37436966 - 37436884
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggt 249  Q
    |||||||||||||||||||| |||||||||||  || ||||||||||||||| |||||| | ||| |||||||||| ||||||    
T  37436966 ggtgtgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaatatggaaattttatttcaaggt 37436884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 46960347 - 46960433
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||||||||||||| |||  |||||||||| ||||||||||||||| ||| |||||| |||||  || |||||||||||    
T  46960347 attaagggtgtgtttgtttcaaatttatcaaatttattcctaggaataacattctttggaatataaagatgagaaatttattccaag 46960433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 13653581 - 13653661
Alignment:
Q  172 gtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatg-taaattttattccaaggtat 251  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  || ||||||| ||||||||    
T  13653581 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtat 13653661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 39329347 - 39329403
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaata 223  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  39329347 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaata 39329403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 52186344 - 52186265
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaa 246  Q
    ||||| ||||||| |||||| ||||||||||||  ||||||||||||||||| |||||| |||||  |||||||||||||    
T  52186344 ggtgtatttgttttaagtttaccaaatttattttaaggaataacattccttggaatataaagatgagaattttattccaa 52186265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 35187181 - 35187257
Alignment:
Q  168 gtgtgtttgtttcaa-gtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    ||||||||||||||| |||| |||||||||||  ||||||||| ||| ||||||||||| ||||| |||||||||||    
T  35187181 gtgtgtttgtttcaaagtttaccaaatttattcttaggaataatatttcttgaaatataaagatggaaattttattc 35187257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 4683718 - 4683639
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||| |||||||||||||  |||||||||||||| ||||||||||  ||| |||||| |||||  |||||||||||||||    
T  4683718 tgtgattgtttcaagtttatcaaatttatttctaagaataacattttttggaatataaagatgggaattttattccaagg 4683639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 251
Target Start/End: Complemental strand, 17475659 - 17475572
Alignment:
Q  164 aagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||| |||||||||||  |||||||||| ||| |||||||||||  || || ||| | ||| |||||||||||||||||||    
T  17475659 aagggtgtgttcgtttcaagtttatcaaatttattcctaagaataacattctatggaaaataaaaatggaaattttattccaaggtat 17475572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 49627295 - 49627374
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttatt 242  Q
    ||||| |||||||||||||| ||| |||||||||||| || |||||||||| |||| |||||| |||||  |||||||||    
T  49627295 taaggatgtgtttgtttcaaatttaccaaatttatttttaagaataacatttcttggaatataaagatgggaattttatt 49627374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 24116683 - 24116597
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||| ||||||  ||||||||||  || ||||||||||||||  |||||| |||||  ||||||||| ||||||||    
T  24116683 agggtgtgtttgttttaagtttaacaaatttattcttaagaataacattccttagaatataaagatgagaattttatttcaaggtat 24116597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 45771815 - 45771901
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||||| ||||||||||| | | ||||||| || |||| || ||| || ||  ||||||||||||||||||    
T  45771815 agggtgtgtttgtttcaagtttaccaaatttattcccatgaataacctttcttggaacataaaggtgagaattttattccaaggtat 45771901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 3939216 - 3939301
Alignment:
Q  157 taaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttatt 242  Q
    |||||||| |||||||||||||| ||||||  ||||| ||||| |||||||||||||| ||| |||||| | | || |||||||||    
T  3939216 taaaattatgggtgtgtttgttttaagtttatcaaatatatttttaggaataacattctttggaatataaaaaagtgaattttatt 3939301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 37726805 - 37726858
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttg 218  Q
    |||||||||||||||||||||  | ||||||||| |||||||||||||||||||    
T  37726805 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 37726858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 37261540 - 37261620
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    ||||| ||||||||||||||||||  ||||||||||| || || |||||||| ||| |||||| | |||| ||||||||||    
T  37261540 taaggatgtgtttgtttcaagtttatcaaatttatttttatgattaacattcattggaatataaatatgtgaattttattc 37261620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 31807093 - 31807010
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||| |||||||||   |||||||||||||| |||||| ||| |||| || ||| ||||| ||||||||||| |||||||    
T  31807093 gtgtgtttatttcaagttgatcaaatttatttctaagaataatatttcttggaacataaagatgaaaattttattctaaggtat 31807010  T

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Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 9011511 - 9011437
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaatttt 239  Q
    ||||||||||||||| ||||||  ||||||||||| ||||||||| |||||| | || ||| ||||| |||||||    
T  9011511 agggtgtgtttgttttaagtttatcaaatttatttttaggaataatattcctcggaacataaagatgaaaatttt 9011437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 38519405 - 38519323
Alignment:
Q  169 tgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||| ||| |||||||||||  |||||||||||||  ||| || ||| | ||| |||||||||||||| ||||    
T  38519405 tgtgtttgtttcaaatttaccaaatttattcgtaggaataacattttttggaacataaaaatgaaaattttattccaatgtat 38519323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 45813719 - 45813657
Alignment:
Q  189 caaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||  |||||||||||||| |||||||||| |||||| |||||||||  |||||||    
T  45813719 caaatttattcttaggaataacattcattgaaatataaagatgtgaattttattttaaggtat 45813657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 49824067 - 49824022
Alignment:
Q  170 gtgtttgtttcaagtttgccaaatttatttctaggaataacattcc 215  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||    
T  49824067 gtgtttgtttcaagtttatcaaatttattcctaggaataacattcc 49824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 6890201 - 6890171
Alignment:
Q  156 ttaaaattaagggtgtgtttgtttcaagttt 186  Q
    |||||||||||||||||||||||||||||||    
T  6890201 ttaaaattaagggtgtgtttgtttcaagttt 6890171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 6892047 - 6892017
Alignment:
Q  156 ttaaaattaagggtgtgtttgtttcaagttt 186  Q
    |||||||||||||||||||||||||||||||    
T  6892047 ttaaaattaagggtgtgtttgtttcaagttt 6892017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 6978518 - 6978552
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttat 197  Q
    |||||||||||||||||||||||| ||||||||||    
T  6978518 taagggtgtgtttgtttcaagtttaccaaatttat 6978552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 47677368 - 47677449
Alignment:
Q  166 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||| ||| ||||||   |||||||||  ||||||||| ||| |||| |||||| |||||  ||||||||||||||    
T  47677368 gggtgtgtttatttaaagtttatgaaatttattcttaggaataaaatttcttggaatataaagatgagaattttattccaag 47677449  T

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Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 8029025 - 8029107
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 247  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  8029025 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaag 8029107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 6706103 - 6706015
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||  |||||||||| |||||||    
T  6706103 taagggtatgtttgtttcaagtttaccaattttatttctaggaataacattccttgaaatataaagatgagaattttattctaaggtat 6706015  T

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Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 14170740 - 14170820
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  14170740 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaagg 14170820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 10246465 - 10246382
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  10246465 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 10246382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 18897640 - 18897726
Alignment:
Q  162 ttaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  18897640 ttaagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 18897726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 1316741 - 1316824
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||| |||||  |||||||||||||||    
T  1316741 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattccaagg 1316824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 2657422 - 2657505
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||    
T  2657422 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagg 2657505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 16968649 - 16968730
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||| |||||  |||||||||||||||    
T  16968649 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaagg 16968730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 7053927 - 7053844
Alignment:
Q  165 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||| | |||  |||||||||||||||    
T  7053927 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaagg 7053844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 9762387 - 9762303
Alignment:
Q  167 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    |||||||||||||||||||| |||| ||||||  |||||||||||||||||| | |||| | |||| |||||||||| |||||||    
T  9762387 ggtgtgtttgtttcaagtttaccaagtttattattaggaataacattccttggattataaatatgtgaattttattcaaaggtat 9762303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 11570136 - 11570073
Alignment:
Q  162 ttaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatata 225  Q
    |||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  11570136 ttaatggtgtctttgtttcaagtttaccaaatttattcctaggaataacattccttggaatata 11570073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 12328062 - 12328142
Alignment:
Q  162 ttaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    |||||||| ||| |||||||| ||| |||||||||||||||| |||||||||| ||| |||||| |||||| ||||| ||||    
T  12328062 ttaagggtctgtctgtttcaaatttaccaaatttatttctagtaataacattctttg-aatataaagatgtgaatttcattc 12328142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 21008322 - 21008245
Alignment:
Q  171 tgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    ||||||||||||||||   |||||||||| || |||||||||| |||| |||||| |||||  |||||||||||||||    
T  21008322 tgtttgtttcaagtttattaaatttatttttatgaataacatttcttggaatataaagatgagaattttattccaagg 21008245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 14781955 - 14781873
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||  ||| ||||||||||| || |||||||||||| ||| || ||| |||||  ||||||||||||||||||    
T  14781955 gtgtgtttgtttcat-tttaccaaatttattcctgggaataacattcattggaacataaagatgagaattttattccaaggtat 14781873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 8314609 - 8314694
Alignment:
Q  158 aaaattaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattc 243  Q
    |||| |||||||  |||||||| ||||||  |||||||||| |||| | ||||||| |||| |||||| | |||||||||||||||    
T  8314609 aaaactaagggtacgtttgttttaagtttatcaaatttattcctagaattaacattacttgcaatatacacatgtaaattttattc 8314694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 7344819 - 7344760
Alignment:
Q  189 caaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||| ||||||||||||||||||| |||||| | |||  |||||||||| ||||    
T  7344819 caaatttattcctaggaataacattccttggaatataaatatgagaattttattctaagg 7344760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 201644 - 201731
Alignment:
Q  161 attaagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||| ||||    
T  201644 attaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattctaagg 201731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 143342 - 143422
Alignment:
Q  172 gtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatg-taaattttattccaaggtat 251  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||  || ||||||| ||||||||    
T  143342 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtat 143422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 3916 - 3828
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||||||   ||||||||||| ||| ||||||||||||||| |||||| ||||   ||||||||||||||||||    
T  3916 taagggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaaggtat 3828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 4186 - 4274
Alignment:
Q  163 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtat 251  Q
    ||||||||||||||||||||||   ||||||||||| ||| ||||||||||||||| |||||| ||||   ||||||||||||||||||    
T  4186 taagggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaaggtat 4274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 29298 - 29218
Alignment:
Q  168 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaagg 248  Q
    |||||||| ||| ||||||  |||||||||| ||| ||||||||||  ||| |||||| ||||   |||||||||||||||    
T  29298 gtgtgtttattttaagtttatcaaatttattcctatgaataacattttttggaatataaagataggaattttattccaagg 29218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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