View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6533_high_73 (Length: 239)
Name: NF6533_high_73
Description: NF6533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6533_high_73 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 39118861 - 39118647
Alignment:
| Q |
13 |
aatataatttagttgataaaagagacattttatgtgttgaggcatatgtttgaaaccacaattctttcattttagagatgctttagaaaaataaagtgag |
112 |
Q |
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| T |
39118861 |
aatacaatttagttgataaaagagacattttatgtgttgaggcatatgtttgaaaccacaattctttcattttagagatgctttagaaaaataaagtgag |
39118762 |
T |
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| Q |
113 |
gacacatggaaaaacaaaacgactagtgcatttgcatggagtgtcctgctgacttcacattttttacttaatttctttcacttaaattttttaactagta |
212 |
Q |
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| T |
39118761 |
gacacgtggaaaaacaaaacgactagtgcatttgcatggagtgtcctgctaacttcacattttttacttaatttctttcacttaaattttttaattagta |
39118662 |
T |
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| Q |
213 |
tcctaggactgaccg |
227 |
Q |
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| T |
39118661 |
tcctaggactgaccg |
39118647 |
T |
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