View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6533_low_28 (Length: 387)

Name: NF6533_low_28
Description: NF6533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6533_low_28
NF6533_low_28
[»] chr2 (67 HSPs)
chr2 (1-173)||(33920996-33921168)
chr2 (1-161)||(11539639-11539799)
chr2 (1-161)||(38008336-38008495)
chr2 (1-161)||(20127738-20127898)
chr2 (1-161)||(6949453-6949613)
chr2 (1-161)||(4356141-4356300)
chr2 (3-161)||(43160397-43160555)
chr2 (1-161)||(4809264-4809423)
chr2 (1-160)||(13315496-13315658)
chr2 (1-161)||(16952937-16953098)
chr2 (1-161)||(17060908-17061069)
chr2 (1-161)||(62959-63118)
chr2 (249-387)||(9542629-9542766)
chr2 (1-159)||(16175734-16175892)
chr2 (1-167)||(42192236-42192401)
chr2 (248-387)||(42782579-42782717)
chr2 (71-161)||(5560053-5560143)
chr2 (1-160)||(15551059-15551218)
chr2 (3-161)||(38007952-38008110)
chr2 (252-387)||(19488182-19488315)
chr2 (248-387)||(10874397-10874535)
chr2 (1-161)||(24140064-24140218)
chr2 (248-387)||(28609858-28609996)
chr2 (1-161)||(42192627-42192787)
chr2 (1-161)||(11540023-11540182)
chr2 (1-161)||(20128122-20128281)
chr2 (268-387)||(18090630-18090748)
chr2 (249-387)||(4289027-4289164)
chr2 (1-161)||(4355757-4355916)
chr2 (1-160)||(15550676-15550835)
chr2 (1-161)||(44219646-44219805)
chr2 (83-163)||(649803-649883)
chr2 (3-161)||(13399807-13399963)
chr2 (1-161)||(43216094-43216253)
chr2 (1-161)||(649529-649687)
chr2 (1-161)||(16953319-16953478)
chr2 (269-371)||(19484636-19484738)
chr2 (1-160)||(43160012-43160171)
chr2 (249-386)||(17838380-17838516)
chr2 (1-160)||(33920615-33920773)
chr2 (292-387)||(6931811-6931906)
chr2 (70-161)||(44220098-44220189)
chr2 (71-172)||(6949898-6949999)
chr2 (282-386)||(32675776-32675879)
chr2 (1-160)||(63343-63507)
chr2 (250-361)||(9916707-9916817)
chr2 (1-160)||(9330179-9330338)
chr2 (1-160)||(4808882-4809040)
chr2 (83-161)||(25336066-25336144)
chr2 (71-161)||(32418600-32418690)
chr2 (1-131)||(13399454-13399583)
chr2 (1-161)||(32418161-32418318)
chr2 (101-160)||(9329915-9329974)
chr2 (70-161)||(31797230-31797321)
chr2 (87-161)||(14942316-14942390)
chr2 (73-161)||(28143485-28143573)
chr2 (73-160)||(20495196-20495283)
chr2 (338-387)||(1501355-1501404)
chr2 (1-62)||(5560935-5560996)
chr2 (102-160)||(9329833-9329892)
chr2 (83-153)||(2190542-2190612)
chr2 (88-160)||(3824179-3824251)
chr2 (1-61)||(22445741-22445801)
chr2 (73-123)||(5035903-5035953)
chr2 (88-160)||(8425358-8425430)
chr2 (129-161)||(17023602-17023634)
chr2 (269-301)||(45003790-45003822)
[»] chr8 (60 HSPs)
chr8 (1-160)||(18428146-18428305)
chr8 (1-160)||(9797111-9797270)
chr8 (3-158)||(18049595-18049750)
chr8 (1-161)||(34799081-34799241)
chr8 (1-163)||(28254425-28254587)
chr8 (269-387)||(25345899-25346018)
chr8 (248-387)||(24055745-24055884)
chr8 (1-161)||(15256213-15256375)
chr8 (31-161)||(41260273-41260402)
chr8 (1-161)||(599883-600042)
chr8 (1-161)||(16578481-16578640)
chr8 (249-387)||(41158549-41158686)
chr8 (71-168)||(2208709-2208806)
chr8 (270-387)||(42244356-42244472)
chr8 (70-161)||(5730819-5730910)
chr8 (1-161)||(28254811-28254970)
chr8 (1-161)||(42035774-42035933)
chr8 (248-386)||(8762919-8763056)
chr8 (249-387)||(18375557-18375694)
chr8 (249-387)||(36778385-36778522)
chr8 (250-387)||(40586443-40586579)
chr8 (250-386)||(1945094-1945229)
chr8 (1-166)||(9796723-9796887)
chr8 (272-387)||(44380735-44380849)
chr8 (269-387)||(9474028-9474145)
chr8 (22-161)||(15255855-15255993)
chr8 (1-161)||(35427197-35427356)
chr8 (248-387)||(41978764-41978902)
chr8 (248-386)||(8160418-8160555)
chr8 (249-387)||(7391223-7391364)
chr8 (248-387)||(25361420-25361558)
chr8 (1-161)||(599534-599693)
chr8 (248-386)||(25833996-25834133)
chr8 (1-161)||(34799468-34799627)
chr8 (71-160)||(35694332-35694421)
chr8 (1-163)||(5731197-5731358)
chr8 (1-138)||(42036156-42036293)
chr8 (1-161)||(6115495-6115655)
chr8 (1-173)||(7911001-7911172)
chr8 (300-387)||(25618549-25618636)
chr8 (1-174)||(41260646-41260818)
chr8 (272-386)||(32847102-32847216)
chr8 (3-160)||(18049978-18050134)
chr8 (273-387)||(41531793-41531906)
chr8 (14-161)||(16578110-16578256)
chr8 (272-387)||(4464376-4464491)
chr8 (1-161)||(35693870-35694031)
chr8 (70-161)||(7910618-7910709)
chr8 (112-160)||(35426845-35426893)
chr8 (87-160)||(28877359-28877432)
chr8 (1-134)||(26252838-26252970)
chr8 (73-136)||(10047092-10047155)
chr8 (1-50)||(35426925-35426974)
chr8 (88-160)||(18805167-18805238)
chr8 (247-305)||(2680233-2680291)
chr8 (1-59)||(35694255-35694313)
chr8 (248-305)||(41907996-41908053)
chr8 (269-301)||(2680364-2680396)
chr8 (249-305)||(2961008-2961064)
chr8 (73-161)||(9930112-9930200)
[»] chr6 (47 HSPs)
chr6 (1-161)||(25472397-25472557)
chr6 (1-161)||(5114470-5114629)
chr6 (247-387)||(35160028-35160167)
chr6 (249-387)||(15043827-15043964)
chr6 (1-160)||(24640570-24640728)
chr6 (247-387)||(33319563-33319703)
chr6 (1-161)||(30251076-30251236)
chr6 (246-387)||(24447700-24447840)
chr6 (3-161)||(5120856-5121013)
chr6 (247-387)||(6966234-6966374)
chr6 (1-161)||(31073527-31073686)
chr6 (245-386)||(4895957-4896097)
chr6 (1-161)||(31573722-31573886)
chr6 (250-387)||(4109961-4110102)
chr6 (269-371)||(9978727-9978828)
chr6 (250-387)||(1222289-1222426)
chr6 (3-160)||(25468852-25469010)
chr6 (1-161)||(29891465-29891628)
chr6 (1-161)||(31574110-31574269)
chr6 (278-387)||(14832957-14833065)
chr6 (312-387)||(9735758-9735833)
chr6 (269-387)||(18320632-18320749)
chr6 (18-161)||(28636294-28636435)
chr6 (84-161)||(31073145-31073222)
chr6 (1-161)||(29891082-29891241)
chr6 (70-167)||(32836449-32836546)
chr6 (83-160)||(35163187-35163264)
chr6 (70-161)||(35163640-35163731)
chr6 (112-166)||(22534219-22534273)
chr6 (91-160)||(31242809-31242878)
chr6 (88-161)||(835396-835469)
chr6 (1-62)||(28636581-28636642)
chr6 (112-161)||(30250723-30250772)
chr6 (90-162)||(18297662-18297734)
chr6 (73-161)||(33095716-33095804)
chr6 (246-305)||(33319035-33319094)
chr6 (252-302)||(22975720-22975770)
chr6 (252-302)||(23812631-23812681)
chr6 (112-174)||(28472626-28472688)
chr6 (112-174)||(29859815-29859877)
chr6 (249-302)||(11272751-11272804)
chr6 (83-160)||(32836010-32836087)
chr6 (246-302)||(4425897-4425953)
chr6 (141-173)||(11277105-11277137)
chr6 (1-45)||(30250808-30250852)
chr6 (250-302)||(33979174-33979226)
chr6 (242-302)||(35041986-35042046)
[»] chr4 (97 HSPs)
chr4 (1-161)||(21034237-21034397)
chr4 (1-161)||(56077709-56077868)
chr4 (1-161)||(26974285-26974445)
chr4 (1-166)||(28465466-28465630)
chr4 (1-166)||(34789379-34789543)
chr4 (247-387)||(51347972-51348111)
chr4 (1-163)||(54440954-54441115)
chr4 (250-387)||(12680630-12680771)
chr4 (1-161)||(12593026-12593185)
chr4 (1-161)||(14440213-14440372)
chr4 (1-163)||(34789767-34789929)
chr4 (1-160)||(45838932-45839092)
chr4 (250-387)||(8532132-8532265)
chr4 (246-386)||(9887267-9887406)
chr4 (1-161)||(19529078-19529238)
chr4 (1-161)||(21034621-21034781)
chr4 (1-161)||(55677342-55677502)
chr4 (1-160)||(6616675-6616834)
chr4 (1-163)||(54440571-54440730)
chr4 (249-387)||(2118095-2118233)
chr4 (1-160)||(41114160-41114320)
chr4 (249-387)||(5759247-5759384)
chr4 (1-161)||(46736657-46736816)
chr4 (250-387)||(3759185-3759321)
chr4 (249-386)||(8989107-8989243)
chr4 (248-361)||(35707656-35707769)
chr4 (3-160)||(28166007-28166163)
chr4 (1-161)||(12593408-12593567)
chr4 (248-387)||(17741568-17741706)
chr4 (1-161)||(19528871-19529031)
chr4 (1-161)||(34807118-34807278)
chr4 (269-387)||(24549328-24549445)
chr4 (249-387)||(30527587-30527724)
chr4 (249-386)||(8964740-8964876)
chr4 (1-160)||(14439831-14439989)
chr4 (249-386)||(16653101-16653237)
chr4 (72-161)||(24851318-24851407)
chr4 (250-387)||(39713496-39713632)
chr4 (1-163)||(28465081-28465242)
chr4 (269-386)||(43023933-43024052)
chr4 (250-361)||(574177-574288)
chr4 (292-386)||(24944173-24944267)
chr4 (1-161)||(33689831-33689989)
chr4 (70-160)||(33777635-33777725)
chr4 (1-161)||(36168716-36168875)
chr4 (248-386)||(37352007-37352144)
chr4 (248-386)||(37356906-37357043)
chr4 (1-161)||(46737040-46737199)
chr4 (273-387)||(52802839-52802952)
chr4 (1-163)||(24851850-24852012)
chr4 (270-387)||(36741820-36741936)
chr4 (75-163)||(1397595-1397683)
chr4 (247-387)||(20590909-20591048)
chr4 (246-386)||(39404588-39404727)
chr4 (248-386)||(29713731-29713867)
chr4 (312-386)||(50043243-50043317)
chr4 (1-160)||(34807524-34807682)
chr4 (72-161)||(41608870-41608959)
chr4 (248-387)||(46106327-46106467)
chr4 (22-167)||(33778018-33778162)
chr4 (4-161)||(45838549-45838705)
chr4 (70-160)||(35643558-35643648)
chr4 (1-160)||(41608377-41608536)
chr4 (272-361)||(53991300-53991388)
chr4 (280-387)||(13172854-13172960)
chr4 (1-160)||(16214880-16215038)
chr4 (70-160)||(36168332-36168422)
chr4 (1-160)||(229164-229322)
chr4 (279-387)||(47555456-47555562)
chr4 (73-160)||(229615-229702)
chr4 (2-149)||(35193322-35193467)
chr4 (70-138)||(17504412-17504480)
chr4 (90-165)||(44219373-44219448)
chr4 (88-161)||(23986522-23986595)
chr4 (70-160)||(26974698-26974788)
chr4 (337-387)||(50118154-50118204)
chr4 (71-160)||(6617116-6617205)
chr4 (75-160)||(10795769-10795854)
chr4 (1-62)||(24851565-24851626)
chr4 (1-62)||(35643667-35643728)
chr4 (97-162)||(35644042-35644107)
chr4 (73-161)||(18965142-18965230)
chr4 (249-305)||(23992319-23992375)
chr4 (83-166)||(30597985-30598068)
chr4 (83-173)||(40160556-40160646)
chr4 (88-161)||(12930806-12930879)
chr4 (88-161)||(24335763-24335836)
chr4 (88-161)||(24336234-24336307)
chr4 (88-161)||(51309976-51310049)
chr4 (70-161)||(40160096-40160187)
chr4 (89-164)||(51641302-51641377)
chr4 (83-161)||(35193768-35193846)
chr4 (112-161)||(17503976-17504025)
chr4 (269-306)||(36678750-36678787)
chr4 (269-301)||(5482915-5482947)
chr4 (249-305)||(15650485-15650541)
chr4 (249-293)||(19109061-19109105)
[»] chr3 (89 HSPs)
chr3 (1-160)||(51473240-51473399)
chr3 (1-161)||(41998231-41998391)
chr3 (1-161)||(47431698-47431858)
chr3 (1-160)||(49951549-49951707)
chr3 (249-387)||(26100777-26100915)
chr3 (1-161)||(38535311-38535470)
chr3 (1-172)||(51828925-51829095)
chr3 (1-161)||(51828342-51828502)
chr3 (1-161)||(43678297-43678456)
chr3 (1-160)||(44676857-44677015)
chr3 (1-161)||(2051297-2051460)
chr3 (1-159)||(55389609-55389766)
chr3 (1-161)||(46013807-46013967)
chr3 (272-387)||(48519678-48519792)
chr3 (1-161)||(51828541-51828701)
chr3 (1-161)||(50662797-50662956)
chr3 (249-387)||(55290396-55290533)
chr3 (22-161)||(49720767-49720905)
chr3 (1-163)||(32730774-32730935)
chr3 (70-161)||(14654201-14654292)
chr3 (1-161)||(16701174-16701336)
chr3 (1-164)||(30513721-30513883)
chr3 (1-173)||(49951931-49952102)
chr3 (1-160)||(40839037-40839195)
chr3 (247-387)||(8396670-8396810)
chr3 (1-171)||(40275479-40275647)
chr3 (22-159)||(329850-329986)
chr3 (248-387)||(19893178-19893315)
chr3 (247-371)||(26776431-26776557)
chr3 (249-387)||(18688579-18688716)
chr3 (249-387)||(4137399-4137539)
chr3 (249-386)||(35860909-35861044)
chr3 (250-387)||(52843090-52843226)
chr3 (1-160)||(22370599-22370758)
chr3 (247-361)||(22477836-22477950)
chr3 (1-161)||(51827959-51828118)
chr3 (1-161)||(52237202-52237361)
chr3 (1-161)||(52375716-52375875)
chr3 (1-161)||(55389982-55390141)
chr3 (3-161)||(330223-330380)
chr3 (1-167)||(52375323-52375488)
chr3 (1-161)||(25534892-25535052)
chr3 (269-387)||(19360754-19360871)
chr3 (1-157)||(34104644-34104798)
chr3 (1-160)||(40838655-40838813)
chr3 (1-161)||(40275095-40275256)
chr3 (275-387)||(53802268-53802381)
chr3 (241-387)||(22522173-22522321)
chr3 (1-164)||(52236815-52236977)
chr3 (269-361)||(11951010-11951101)
chr3 (1-161)||(14654576-14654733)
chr3 (1-161)||(46013424-46013583)
chr3 (1-161)||(49720373-49720532)
chr3 (1-168)||(44676467-44676633)
chr3 (1-157)||(34105033-34105190)
chr3 (272-387)||(29528774-29528888)
chr3 (272-387)||(39094456-39094570)
chr3 (70-160)||(16689361-16689451)
chr3 (1-161)||(38535680-38535839)
chr3 (1-161)||(51472857-51473016)
chr3 (282-371)||(28979640-28979728)
chr3 (1-160)||(32730392-32730550)
chr3 (1-161)||(2044273-2044432)
chr3 (292-387)||(40817219-40817314)
chr3 (73-163)||(36701552-36701642)
chr3 (83-161)||(41998694-41998772)
chr3 (1-161)||(43678669-43678828)
chr3 (78-150)||(39010482-39010554)
chr3 (70-167)||(43222386-43222483)
chr3 (73-161)||(36701108-36701196)
chr3 (70-160)||(27199705-27199795)
chr3 (1-161)||(39010077-39010235)
chr3 (72-161)||(33412609-33412698)
chr3 (70-175)||(49407784-49407889)
chr3 (1-161)||(43222774-43222934)
chr3 (88-161)||(49408252-49408325)
chr3 (113-161)||(27200187-27200235)
chr3 (70-166)||(55192115-55192211)
chr3 (70-161)||(37075688-37075779)
chr3 (70-161)||(50900980-50901071)
chr3 (83-161)||(37076140-37076218)
chr3 (277-363)||(42614373-42614457)
chr3 (254-302)||(17228576-17228624)
chr3 (83-161)||(50900534-50900612)
chr3 (83-160)||(8873694-8873770)
chr3 (247-292)||(19353794-19353839)
chr3 (248-305)||(41053790-41053847)
chr3 (73-161)||(12141147-12141235)
chr3 (249-305)||(52462214-52462270)
[»] chr7 (74 HSPs)
chr7 (1-161)||(9181534-9181693)
chr7 (1-161)||(48247976-48248136)
chr7 (1-160)||(25637583-25637741)
chr7 (252-387)||(9151324-9151458)
chr7 (1-161)||(15712367-15712526)
chr7 (249-387)||(39647981-39648118)
chr7 (1-161)||(786784-786944)
chr7 (248-387)||(39278143-39278281)
chr7 (13-161)||(7732884-7733031)
chr7 (249-387)||(31896813-31896950)
chr7 (1-160)||(5745642-5745800)
chr7 (70-161)||(16917715-16917806)
chr7 (248-387)||(21669230-21669368)
chr7 (1-160)||(14311672-14311830)
chr7 (1-161)||(39388651-39388812)
chr7 (248-387)||(691193-691332)
chr7 (70-161)||(11971336-11971427)
chr7 (1-161)||(7732490-7732649)
chr7 (1-161)||(16081301-16081460)
chr7 (5-172)||(28687584-28687750)
chr7 (1-160)||(26026703-26026861)
chr7 (250-387)||(44806483-44806619)
chr7 (1-162)||(27245589-27245749)
chr7 (1-161)||(16081684-16081843)
chr7 (269-387)||(48527431-48527548)
chr7 (3-161)||(25637199-25637357)
chr7 (1-167)||(27245199-27245365)
chr7 (279-387)||(35155518-35155625)
chr7 (4-157)||(35161189-35161342)
chr7 (1-160)||(26026320-26026479)
chr7 (1-161)||(26048332-26048490)
chr7 (249-387)||(27732952-27733090)
chr7 (250-387)||(17172799-17172935)
chr7 (1-168)||(24929688-24929859)
chr7 (269-371)||(7854985-7855087)
chr7 (1-161)||(9181794-9181956)
chr7 (70-160)||(26047960-26048050)
chr7 (249-386)||(24682277-24682413)
chr7 (249-382)||(29469128-29469260)
chr7 (71-163)||(5334273-5334365)
chr7 (70-161)||(5333882-5333973)
chr7 (312-387)||(11835021-11835096)
chr7 (312-387)||(21598014-21598089)
chr7 (249-371)||(49144032-49144155)
chr7 (317-387)||(34873725-34873795)
chr7 (1-160)||(28687884-28688041)
chr7 (299-387)||(33636924-33637012)
chr7 (272-361)||(3795643-3795731)
chr7 (1-160)||(11973787-11973945)
chr7 (1-161)||(5746024-5746184)
chr7 (73-161)||(34595228-34595316)
chr7 (1-161)||(48247589-48247752)
chr7 (73-160)||(787242-787329)
chr7 (70-161)||(2758151-2758242)
chr7 (84-156)||(35160660-35160734)
chr7 (2-161)||(9394117-9394273)
chr7 (319-387)||(4850353-4850421)
chr7 (1-172)||(14311306-14311477)
chr7 (73-161)||(39136688-39136776)
chr7 (83-161)||(39136999-39137077)
chr7 (98-160)||(40669689-40669751)
chr7 (83-163)||(9393736-9393816)
chr7 (73-161)||(49064036-49064124)
chr7 (116-163)||(34594583-34594630)
chr7 (73-161)||(4477704-4477792)
chr7 (73-161)||(49064176-49064264)
chr7 (247-302)||(2067846-2067901)
chr7 (73-161)||(45815346-45815431)
chr7 (1-50)||(26048060-26048109)
chr7 (83-160)||(35578902-35578979)
chr7 (112-160)||(5184431-5184479)
chr7 (89-161)||(5445132-5445204)
chr7 (89-161)||(5454176-5454248)
chr7 (2-42)||(32427310-32427350)
[»] chr1 (81 HSPs)
chr1 (1-161)||(37505069-37505229)
chr1 (1-163)||(34555765-34555928)
chr1 (1-160)||(21938566-21938724)
chr1 (1-161)||(9992156-9992316)
chr1 (1-161)||(10278935-10279091)
chr1 (1-165)||(44582442-44582607)
chr1 (248-387)||(4893873-4894011)
chr1 (249-387)||(38896719-38896857)
chr1 (249-386)||(24289200-24289337)
chr1 (249-386)||(28573066-28573202)
chr1 (247-387)||(19320418-19320557)
chr1 (1-161)||(30786773-30786933)
chr1 (3-160)||(50305169-50305328)
chr1 (1-161)||(44954611-44954770)
chr1 (1-163)||(10278548-10278710)
chr1 (1-160)||(17641749-17641912)
chr1 (249-386)||(33074231-33074367)
chr1 (247-387)||(29184475-29184614)
chr1 (70-162)||(50304440-50304532)
chr1 (70-161)||(30787251-30787342)
chr1 (1-160)||(37421163-37421323)
chr1 (70-160)||(37421397-37421488)
chr1 (248-382)||(1375892-1376025)
chr1 (70-160)||(29439375-29439465)
chr1 (249-387)||(47137763-47137901)
chr1 (1-164)||(2867910-2868072)
chr1 (250-387)||(33363477-33363613)
chr1 (248-361)||(42682522-42682635)
chr1 (1-160)||(44954229-44954387)
chr1 (3-161)||(9992542-9992699)
chr1 (1-163)||(44582057-44582218)
chr1 (299-387)||(50563377-50563465)
chr1 (247-382)||(22194465-22194599)
chr1 (1-161)||(52335895-52336054)
chr1 (1-161)||(1837507-1837666)
chr1 (1-161)||(16299067-16299225)
chr1 (1-158)||(4080026-4080182)
chr1 (1-167)||(37505453-37505617)
chr1 (273-384)||(1828346-1828456)
chr1 (246-361)||(10763519-10763633)
chr1 (1-161)||(29438932-29439092)
chr1 (272-387)||(49587021-49587135)
chr1 (1-161)||(2868093-2868252)
chr1 (249-361)||(29840689-29840800)
chr1 (1-161)||(34555381-34555542)
chr1 (319-387)||(51964532-51964600)
chr1 (300-387)||(5428220-5428306)
chr1 (1-161)||(443936-444095)
chr1 (1-161)||(8229639-8229801)
chr1 (1-168)||(23340178-23340344)
chr1 (1-160)||(8230026-8230184)
chr1 (31-161)||(16298684-16298813)
chr1 (272-387)||(16302047-16302166)
chr1 (1-125)||(17641403-17641526)
chr1 (70-160)||(39485068-39485158)
chr1 (70-160)||(45048158-45048248)
chr1 (269-387)||(46623396-46623513)
chr1 (73-162)||(50926231-50926320)
chr1 (1-160)||(6224700-6224860)
chr1 (86-161)||(23526660-23526735)
chr1 (73-167)||(44291297-44291391)
chr1 (1-161)||(1744330-1744488)
chr1 (73-161)||(23526986-23527074)
chr1 (73-161)||(50926697-50926785)
chr1 (71-161)||(17088593-17088683)
chr1 (83-161)||(29021331-29021409)
chr1 (83-160)||(45048601-45048678)
chr1 (73-161)||(44802627-44802715)
chr1 (88-159)||(25274760-25274831)
chr1 (89-160)||(50419393-50419464)
chr1 (83-161)||(17088148-17088226)
chr1 (247-305)||(29693374-29693432)
chr1 (244-302)||(52037385-52037443)
chr1 (1-58)||(30787157-30787214)
chr1 (90-157)||(39843497-39843564)
chr1 (83-137)||(44291777-44291831)
chr1 (88-161)||(36228795-36228868)
chr1 (88-161)||(50419731-50419804)
chr1 (83-135)||(9833618-9833670)
chr1 (245-305)||(28631797-28631857)
chr1 (112-172)||(33144413-33144473)
[»] chr5 (54 HSPs)
chr5 (1-161)||(28290029-28290188)
chr5 (1-161)||(15029694-15029853)
chr5 (1-167)||(19291352-19291518)
chr5 (3-161)||(8419008-8419164)
chr5 (22-161)||(18149735-18149873)
chr5 (269-387)||(30181316-30181433)
chr5 (248-386)||(752054-752191)
chr5 (249-387)||(36884780-36884917)
chr5 (250-387)||(3086433-3086570)
chr5 (249-386)||(43136273-43136410)
chr5 (1-161)||(4967154-4967315)
chr5 (1-177)||(38901027-38901200)
chr5 (249-387)||(34719363-34719500)
chr5 (269-387)||(41693047-41693164)
chr5 (250-387)||(25695539-25695675)
chr5 (1-161)||(15115480-15115636)
chr5 (272-387)||(17636708-17636822)
chr5 (6-159)||(38900648-38900800)
chr5 (82-160)||(14340401-14340479)
chr5 (250-387)||(34725259-34725397)
chr5 (299-387)||(42975438-42975526)
chr5 (1-161)||(28289686-28289845)
chr5 (1-161)||(18150108-18150268)
chr5 (73-160)||(21370689-21370776)
chr5 (1-161)||(21371081-21371240)
chr5 (1-163)||(39083359-39083521)
chr5 (1-125)||(5161620-5161744)
chr5 (4-160)||(4966819-4966973)
chr5 (299-387)||(2182760-2182848)
chr5 (70-161)||(32697679-32697770)
chr5 (83-161)||(10721788-10721866)
chr5 (71-160)||(14340864-14340953)
chr5 (73-161)||(22651767-22651855)
chr5 (279-387)||(33704785-33704892)
chr5 (70-161)||(16752584-16752675)
chr5 (73-160)||(20266371-20266458)
chr5 (83-161)||(41834525-41834603)
chr5 (22-161)||(5161974-5162113)
chr5 (113-163)||(16753066-16753116)
chr5 (249-302)||(2366839-2366892)
chr5 (324-361)||(12588368-12588405)
chr5 (88-161)||(17260691-17260764)
chr5 (249-305)||(9809820-9809876)
chr5 (1-162)||(22651346-22651506)
chr5 (247-302)||(1685045-1685100)
chr5 (250-305)||(12702061-12702116)
chr5 (86-161)||(27307063-27307138)
chr5 (70-161)||(27307513-27307604)
chr5 (248-302)||(13596908-13596962)
chr5 (87-161)||(28495301-28495375)
chr5 (81-138)||(13557017-13557074)
chr5 (88-161)||(28494846-28494919)
chr5 (73-138)||(32305843-32305908)
chr5 (249-305)||(7863528-7863584)
[»] scaffold0097 (2 HSPs)
scaffold0097 (4-161)||(46655-46812)
scaffold0097 (1-161)||(46268-46428)
[»] scaffold0759 (1 HSPs)
scaffold0759 (272-387)||(3446-3561)
[»] scaffold0712 (2 HSPs)
scaffold0712 (3-161)||(6394-6551)
scaffold0712 (1-160)||(6776-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (3-161)||(6412-6569)
scaffold0709 (1-160)||(6794-6957)
[»] scaffold0381 (1 HSPs)
scaffold0381 (246-386)||(11138-11277)
[»] scaffold0069 (1 HSPs)
scaffold0069 (247-387)||(14553-14692)
[»] scaffold0484 (1 HSPs)
scaffold0484 (248-387)||(8174-8312)
[»] scaffold0051 (1 HSPs)
scaffold0051 (248-387)||(55464-55603)
[»] scaffold0009 (2 HSPs)
scaffold0009 (265-387)||(139480-139601)
scaffold0009 (312-387)||(233129-233204)
[»] scaffold0057 (1 HSPs)
scaffold0057 (249-387)||(17400-17537)
[»] scaffold0032 (1 HSPs)
scaffold0032 (287-387)||(2881-2981)
[»] scaffold0115 (1 HSPs)
scaffold0115 (299-387)||(14917-15005)
[»] scaffold0230 (1 HSPs)
scaffold0230 (269-387)||(26046-26163)
[»] scaffold0385 (1 HSPs)
scaffold0385 (272-361)||(4207-4295)
[»] scaffold0007 (2 HSPs)
scaffold0007 (73-161)||(205823-205911)
scaffold0007 (73-161)||(210793-210881)
[»] scaffold1432 (1 HSPs)
scaffold1432 (70-161)||(518-609)
[»] scaffold0079 (1 HSPs)
scaffold0079 (331-371)||(8778-8818)
[»] scaffold0001 (1 HSPs)
scaffold0001 (251-306)||(12940-12995)
[»] scaffold0249 (1 HSPs)
scaffold0249 (248-305)||(24917-24974)
[»] scaffold0118 (1 HSPs)
scaffold0118 (247-296)||(43724-43773)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-62)||(78417-78478)
[»] scaffold0021 (1 HSPs)
scaffold0021 (84-161)||(159348-159425)


Alignment Details
Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 33920996 - 33921168
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||||| |||| |||||||||||       ||| |||||||||||||||||||||||||||    
T  33920996 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaaacatttagtttaaagacgattttgttcgattt 33921095  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaat 173  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  33921096 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaaataaaat 33921168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11539799 - 11539639
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  11539799 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 11539700  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11539699 aaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 11539639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 38008336 - 38008495
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||| |||||| ||||| |||||| ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  38008336 actaaaactatcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 38008434  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38008435 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 38008495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 20127898 - 20127738
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||||||||| ||| ||  |||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  20127898 actaaaattgtcatttttgtgcgtttctggggttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 20127799  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20127798 aaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaag 20127738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6949613 - 6949453
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||| |||| |||||||||||       ||||||||| || ||||||||||||||||||    
T  6949613 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagttaaaggacgattttgttcgattt 6949514  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  6949513 aaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaag 6949453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 4356141 - 4356300
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||||| |||||||||       |||||||||||| ||||||||||||||||||    
T  4356141 actaaaactgtcatttctgtgcgtttctggagttggaaatagggaaatagaattaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 4356239  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  4356240 aaaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaag 4356300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 43160397 - 43160555
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    |||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| |||||||| |||||||||||    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgatttagttcgatttaa 43160496  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  43160497 aaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaag 43160555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 4809264 - 4809423
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||| ||||||| ||||    
T  4809264 actaaaactgtcatttttgtgcttttttgtagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgactttgttcaattt 4809362  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4809363 aaaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaag 4809423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 13315658 - 13315496
Alignment:
Q  1 actaaaactgtcatttttgtgcattta-tgaagttggaaatagggatatagaactaaaactgcnnnnnnn--catatagtttaaagacgattttgttcga 97  Q
    |||||||||||||||| |||||||||  || ||||||||||||||| |||| |||||||||||         |||||||||||| |||||||||||||||    
T  13315658 actaaaactgtcatttctgtgcattttctggagttggaaatagggagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcga 13315559  T
Q  98 tttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  13315558 tttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaa 13315496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 16953098 - 16952937
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||||| |||  |||||||| ||        |||||||||||| |||||||||||||||||    
T  16953098 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatt 16952999  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  16952998 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaag 16952937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 17061069 - 17060908
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||||| |||  |||||||| ||        |||||||||||| |||||||||||||||||    
T  17061069 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatt 17060970  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  17060969 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaag 17060908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 63118 - 62959
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  63118 actaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 63020  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
     |||||| || |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  63019 taaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaag 62959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 9542629 - 9542766
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| ||||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  9542629 aactagttacaaacccgtgcttcgcacgggttgaataacatattttttaaaa-atttagctctgaagaagaaatcttataaattacggaaaattgttgtc 9542727  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||| ||||||||||| |||  |||||||||||||||    
T  9542728 ctttatcaatgtgaaaattaaaactgcgtaaaccaaaat 9542766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 16175734 - 16175892
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  16175734 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 16175833  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 159  Q
    |||| || || ||||| |||||||||||||| ||||||  |||||||||||||||||||    
T  16175834 aaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaatta 16175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 42192401 - 42192236
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || |||| |||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  42192401 actaaaactgtcatttatgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 42192303  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaa 167  Q
    |||| || || |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  42192302 aaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccaaaa 42192236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 42782717 - 42782579
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| ||| |||||||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| ||||||||||||    
T  42782717 aaactagttacaaacccgtgcttcacacgggttgaataacgtatttttttaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgt 42782619  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  42782618 cctttataaatgtgaaaatcaaagttgcgtaaaccaaaat 42782579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 5560143 - 5560053
Alignment:
Q  71 atatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5560143 atatagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 5560053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 15551059 - 15551218
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||| | |||| ||||| ||| || ||||||||||||||| |||| |||||||||||       ||||||  |||| ||||||||||||||||||    
T  15551059 actaaaactattatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatataacttaaggacgattttgttcgattt 15551158  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  15551159 aaaaaatatatgaccatttttgtgagttggtcaaaatggtagggccaaaagtgtaattaa 15551218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 38008110 - 38007952
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    |||||||||||||| ||||| ||| || ||||||||||||||| |||  |||||||||||       |||||||||||  ||||||||||||||||||||    
T  38008110 taaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaa 38008011  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    || || || ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  38008010 aagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 38007952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 252 - 387
Target Start/End: Complemental strand, 19488315 - 19488182
Alignment:
Q  252 tagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctt 351  Q
    |||||| ||| | |||||||||||||||||||||| |||||||||||||  ||| | |  |||| |||||||||||||||||| ||||||||||||||||    
T  19488315 tagttacaaacccgtgtttcgcacgggttgaataacgtattttttaaaa--ttttgttttgaaggagaaatcttataaattacggaaaattgttgtcctt 19488218  T
Q  352 tataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||| ||| |||||||||||    
T  19488217 tataaatgtgaaaatcaaagctgcataaaccaaaat 19488182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 248 - 387
Target Start/End: Original strand, 10874397 - 10874535
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||  | ||| |||||||| |||||||||  |||||||| |||| ||||| |  |||| |||||||||||||||||||||||||||||||    
T  10874397 aaactagttacaatcccgtgcttcgcacgagttgaataacatatttttttaaaa-tttagtttcgaaggagaaatcttataaattacagaaaattgttgt 10874495  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  10874496 cctttataaatgtgaaaatcaaagttgcgtaaaccaaaat 10874535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 24140064 - 24140218
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| ||||| ||| || ||||||||||||||||||||||||||||||||        ||||||||||  |||||||||||| |||||    
T  24140064 actaaaaatgtcatttctgtgcgtttctggagttggaaatagggatatagaactaaaactgcaa------atatagtttatggacgattttgtttgattt 24140157  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||| || ||||||||||||||||||||||| |||  |||| ||||||||||||||||    
T  24140158 aaaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaag 24140218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 28609996 - 28609858
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| || ||||||||||||||| |||||||||  ||| ||||| || |||| ||||||||||||||||||||||||||| |||    
T  28609996 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttttttaaa-tttagttccgaaggagaaatcttataaattacagaaaattgatgt 28609898  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  28609897 cctttataaatgtgaaaatcaaagctgcttaaaccaaaat 28609858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 42192627 - 42192787
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||  |||  |||||||||||       ||| |||||||  ||||||||||||||||||    
T  42192627 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaaacatctagtttagggacgattttgttcgattt 42192726  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42192727 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 42192787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 11540023 - 11540182
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || |||||||||||||||||||  |||||||||||       |||||||||||  ||||||||||||||||||    
T  11540023 actaaaactgtcatttctgtgcgtttctggagttggaaatagggatatatgactaaaactgcaaaaaa-catatagtttatggacgattttgttcgattt 11540121  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || |||||||||||||||||||||||||||  | |||||||||| ||||||||    
T  11540122 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaag 11540182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 20128122 - 20128281
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| |||| ||||||| |||       |||||||||||| |||||||||||| |||||    
T  20128122 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgtttgattt 20128220  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||||| ||||||  |||||||||||||||||||||    
T  20128221 aaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaag 20128281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 268 - 387
Target Start/End: Original strand, 18090630 - 18090748
Alignment:
Q  268 tttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatc 367  Q
    ||||||||||||||||||| |||||||| ||||| ||||| || |||| |||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  18090630 tttcgcacgggttgaataacgtatttttcaaaaa-tttagttccgaaggagaaatcttataaattacggaaaactattgtcctttataaatgtgaaaatc 18090728  T
Q  368 aaaggtgcgtaaaccaaaat 387  Q
    |||| |||| ||||||||||    
T  18090729 aaagctgcgcaaaccaaaat 18090748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 4289027 - 4289164
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||||||||||||| ||||| |  |||| |||||||||||||||||  |||||||||||||    
T  4289027 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttagtttcgaaggagaaatcttataaattatggaaaattgttgtc 4289125  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||| |||||||||||||||  ||||||||| |||||    
T  4289126 ctttatcaatgtgaaaatcaaaactgcgtaaactaaaat 4289164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 4355916 - 4355757
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  4355916 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 4355818  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||| ||||||||||  |||||||||||||||||||||    
T  4355817 aaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaag 4355757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 15550835 - 15550676
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  15550835 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 15550736  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || || ||||| |||||||||||||||| ||||  |||| |||||||||||||||    
T  15550735 aaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaa 15550676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 44219805 - 44219646
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||| ||||| |||| |||||||||||       |||||| ||||| ||| ||||||||||||||    
T  44219805 actaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaa-catataatttaaggacaattttgttcgattt 44219707  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||| || || |||||| |||||||| ||||||||| |||||||||||||||||||||    
T  44219706 aaaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaag 44219646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 649803 - 649883
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  649803 gacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaagtc 649883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 13399807 - 13399963
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    |||||||||||||| | ||| |||||| ||||||||||||||| |||  |||||||||||        ||||||||||| ||| ||||||||||||||||    
T  13399807 taaaactgtcatttctatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaat-atatagtttaaggacaattttgttcgatttaa 13399905  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    || | ||| |||||||||||||||||||||||||||||||||| |||| || |||||||    
T  13399906 aagaaata-gaccattttcgtgagttggtcaaaatggtaggactaaaattgcaattaag 13399963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 43216094 - 43216253
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| ||||||||| || |||||||||||| || |||| |||||||||||        ||||||||||  ||||||||||||||||||    
T  43216094 actaaaattgtcatttctgtgcatttctggagttggaaatagagagataggactaaaactgcaaaaaat-atatagtttagggacgattttgttcgattt 43216192  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| ||||||||||||||||||| |  ||||| |||||||||||||||    
T  43216193 aaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaag 43216253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 649687 - 649529
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||||       |||||||||||  ||||||||||||||||||    
T  649687 actaaaac-gtcatttatgtgcgtttctggagttggaaatagggagacagaactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 649590  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||| |||||||||| |||  |||||||||||||||||||||    
T  649589 aaaagaggtaggaccaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaag 649529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16953319 - 16953478
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||| ||||  |||  |||||||||||||    
T  16953319 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaa-catatactttagggacatttttgttcgattt 16953417  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||| ||||||||||||||||  |||||||||||||||||||||    
T  16953418 aaaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaag 16953478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 371
Target Start/End: Original strand, 19484636 - 19484738
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    ||||||||||||||||||  ||||||||  ||||||||| |  |||| |||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  19484636 ttcgcacgggttgaataacatattttttttaaaatttagttttgaaggagaaatcttataaattatggaaaattgttgtcctttataaatgtgaaaatca 19484735  T
Q  369 aag 371  Q
    |||    
T  19484736 aag 19484738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 43160171 - 43160012
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||| |||||||||||         |||||||||  ||||||||||||||||||    
T  43160171 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaaatgtatagtttagggacgattttgttcgattt 43160072  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || || ||||| |||||||||||| ||||||||  |||||||||| |||||||||    
T  43160071 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 43160012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 386
Target Start/End: Complemental strand, 17838516 - 17838380
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| || |||| |||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| ||||||||||  |    
T  17838516 aactagttataaacccgtgctttgcacaggttgaataacgtatttttttaaaa-tttagttatgaaggagaaatcttataaattacggaaaattgttacc 17838418  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  17838417 ctttataaatgtgaaaatcaaagttgcgtaaacaaaaa 17838380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 33920773 - 33920615
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| ||| || ||||| ||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  33920773 actaaaactgtcatttctatgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaat-catatagtttagggacgattttgttcgattt 33920675  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || || || || |||||||||||||||||||||  |||||||||| |||||||||    
T  33920674 aaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 33920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 6931906 - 6931811
Alignment:
Q  292 tttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||| ||| |||||||||  ||| |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6931906 ttttttaaatatttagctctcaaggagaattcttatagattacggaaaattgttgtcctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 6931811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 44220098 - 44220189
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  |||||||||||| |||||||||||| || |||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  44220098 catatagtttagggacgattttgtttgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaag 44220189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 6949898 - 6949999
Alignment:
Q  71 atatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataa 170  Q
    ||||||||||  ||||||||||||| |||||||| |  || ||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||||||    
T  6949898 atatagtttagggacgattttgttctatttaaaagatgtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaaataa 6949997  T
Q  171 aa 172  Q
    ||    
T  6949998 aa 6949999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 32675776 - 32675879
Alignment:
Q  282 aataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaac 381  Q
    ||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||| |||||||||    
T  32675776 aataacgtatttttttaaaa-tttagttttgaaggagaaatcttataaattacggaaaattgttgtcctctataagtgtgaaaatcaaagttgcgtaaac 32675874  T
Q  382 caaaa 386  Q
    |||||    
T  32675875 caaaa 32675879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 63343 - 63507
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-----catatagtttaaagacgattttgttc 95  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||| | |||| |||||||||||            |||||||||||  ||||||||||||     
T  63343 actaaaactgtcatttatgtgcgtttctagagttggaaataggaagataggactaaaactgcaaaaaaaaaaaacatatagtttagggacgattttgttt 63442  T
Q  96 gatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||| ||||||||||||||||||||||||||||||||   |||||||||| | |||||||    
T  63443 gatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaa 63507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 250 - 361
Target Start/End: Original strand, 9916707 - 9916817
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| ||||||| |||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| ||||||||||||||    
T  9916707 actagttacaaacccgtgcttcgcacaggttgaataacgtatttttttaaaa-tttagttatgaaggagaaatcttataaattacggaaaattgttgtcc 9916805  T
Q  350 tttataaatgtg 361  Q
    ||||||||||||    
T  9916806 tttataaatgtg 9916817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 9330179 - 9330338
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| | ||  ||| |  ||||| ||||||| | |||| |||||||||||       ||||||||||   ||||||||||||||||||    
T  9330179 actaaaactgtcatttctatgtgtttctatagttgaaaataggtagataggactaaaactgcaaaaaaacatatagtttggggacgattttgttcgattt 9330278  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || || ||| | |||||||||||||||||||||  ||||||||||||||||||||    
T  9330279 aaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9330338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 4809040 - 4808882
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||| | |||| ||||||||| |       |||||||||||  ||||||||||||||||||    
T  4809040 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactacaaaaaa-catatagtttatggacgattttgttcgattt 4808942  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || || || || |||||||||||||||||||||  || || |||| |||||||||    
T  4808941 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaagaactaaaaatgtaattaa 4808882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 25336066 - 25336144
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||| |  || ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  25336066 gacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 25336144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 32418600 - 32418690
Alignment:
Q  71 atatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||| |||||||||||||||||||||| || ||  | || |||||||| |||||||||||| ||||||||||||| ||||||||    
T  32418600 atatagtttaaggacgattttgttcgatttaaaagaggtagaatcaatttcgtgaattggtcaaaatgataggaccaaaagtataattaag 32418690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13399583 - 13399454
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||  ||||||||||||| ||||    
T  13399583 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggacgattttgttccattt 13399485  T
Q  101 aaaaaagataagaccattttcgtgagttggt 131  Q
    |||| || || ||||| |||||||| |||||    
T  13399484 aaaagaggtatgaccaatttcgtgaattggt 13399454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 32418318 - 32418161
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| ||||| ||| || ||||||||||| ||| |||  |||||||||||        ||||||||||  |||||||||||||||||     
T  32418318 actaaaaatgtcatttctgtgcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaat-atatagtttagggacgattttgttcgatt- 32418221  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
     ||| || || ||||| |||||||||||||||||||||  ||||||| |||||||||||||    
T  32418220 -aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaag 32418161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 9329974 - 9329915
Alignment:
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  9329974 aaaaaagataggaccatttttgtgagttggtcaaaattgtaggaccaaaagtgtaattaa 9329915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 31797230 - 31797321
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  |||| ||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  31797230 catatagtttagggacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaag 31797321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 14942316 - 14942390
Alignment:
Q  87 attttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||| ||| ||| ||||||||||||||||| |||||||||||  | |||||||||||||||||||    
T  14942316 attttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaag 14942390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 28143485 - 28143573
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||||||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  ||||||||||||| |||||||    
T  28143485 atagtttagggacgattttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaag 28143573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 20495283 - 20495196
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||  |||||||||||| ||||||||| ||  | || ||||||||||||||||||||||||  || |||||||||| ||||||    
T  20495283 atagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagtgaaattaa 20495196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 1501355 - 1501404
Alignment:
Q  338 aaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  1501355 aaattattgtcctttataaatgtgaaaatcaaagctgcgtaaactaaaat 1501404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5560935 - 5560996
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgc 62  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||    
T  5560935 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc 5560996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 9329892 - 9329833
Alignment:
Q  102 aaaaagataagaccattttcgtgagttgg-tcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||  |||||||||||||||| | |||||||| |||||||||||||||||||||    
T  9329892 aaaaagatataaccattttcgtgagttagatcaaaatgataggaccaaaagtgtaattaa 9329833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 2190542 - 2190612
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtg 153  Q
    |||||||||||||||||| ||||||  | ||||| ||||||||| |||||||||||  | |||||||||||    
T  2190542 gacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgcgatgaccaaaagtg 2190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 3824179 - 3824251
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||| |  | ||||| |||||||||||||| ||||||  | |||||||||| |||||||    
T  3824179 ttttgttcgatttaaaaagggcatgaccaatttcgtgagttggttaaaatgcgatgaccaaaagtataattaa 3824251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22445801 - 22445741
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactg 61  Q
    |||||||||||||||| ||||  ||| |||||||| ||||||||| |||| ||||||||||    
T  22445801 actaaaactgtcatttatgtgtgtttctgaagttgaaaatagggagatagtactaaaactg 22445741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 5035953 - 5035903
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgt 123  Q
    ||||||||  |||| ||||||||||||||||||||| | ||||||||||||    
T  5035953 atagtttagggacggttttgttcgatttaaaaaagacaggaccattttcgt 5035903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 8425430 - 8425358
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||  ||| |||||| |||||||| |||||||||| || |||||    ||||||||||||||||||||    
T  8425430 ttttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 17023634 - 17023602
Alignment:
Q  129 ggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||||| ||||||||    
T  17023634 ggtcaaaatggtaggaccaaaagtataattaag 17023602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 45003790 - 45003822
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaa 301  Q
    ||||||||||||||||||||||||||| |||||    
T  45003790 ttcgcacgggttgaataatgtatttttcaaaaa 45003822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 2e-53; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 18428146 - 18428305
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| |||| | |||||||||       |||||||||||| ||||||||||||||||||    
T  18428146 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggagtaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 18428245  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18428246 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 18428305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 9797111 - 9797270
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||||||||||| | ||||||||||||||||       |||||||||||| ||||||||| || |||||    
T  9797111 actaaaactgtcatttctgtgcgtttatggagttggaaataggtagatagaactaaaactgcaaaaaaacatatagtttaaggacgattttatttgattt 9797210  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9797211 aaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9797270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 18049750 - 18049595
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    |||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||||    
T  18049750 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaa 18049651  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 158  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  18049650 aaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 18049595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 34799241 - 34799081
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| ||||| |||||| ||||||||||||||| |||| |||||||||||       |||||||||||| ||||| ||||||||||||    
T  34799241 actaaaattgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgactttgttcgattt 34799142  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  34799141 aaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaag 34799081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 28254587 - 28254425
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| | ||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||| ||||    
T  28254587 actaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcaattt 28254488  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28254487 aaaatagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaagtc 28254425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 269 - 387
Target Start/End: Complemental strand, 25346018 - 25345899
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaa-tttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatc 367  Q
    ||||||||| |||||||| ||||||||||||||| |||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25346018 ttcgcacggattgaataacgtattttttaaaaaaatttagctccgaaggagaaatcttataaattacggaaaattgttgtcctttataaatgtgaaaatc 25345919  T
Q  368 aaaggtgcgtaaaccaaaat 387  Q
    |||| |||||||||||||||    
T  25345918 aaagttgcgtaaaccaaaat 25345899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 24055884 - 24055745
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| ||||||| |||||||||| ||||||||| |||||||||| |  |||| |||||||||||||||||| ||||||||||||    
T  24055884 aaactagttacaaacccgtgcttcgcacaggttgaataacgtatttttttaaaaatttagtttcgaaggagaaatcttataaattacggaaaattgttgt 24055785  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    | |||||||||||||||||||||| |||||||||||||||    
T  24055784 cttttataaatgtgaaaatcaaagttgcgtaaaccaaaat 24055745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 15256213 - 15256375
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn--catatagtttaaagacgattttgttcgat 98  Q
    ||||||| |||||||| ||||| ||| || ||||||||||||||| |||  |||| ||||||         |||||||||||| ||||||||||||||||    
T  15256213 actaaaattgtcatttctgtgcgtttctggagttggaaatagggagatatgactagaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 15256312  T
Q  99 ttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15256313 ttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaag 15256375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 41260402 - 41260273
Alignment:
Q  31 agttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttgg 130  Q
    ||||||||||||||| |||  |||||||||||       |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  41260402 agttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttgg 41260304  T
Q  131 tcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||||||||||||    
T  41260303 tcaaaatggtaggaccaaaagtgtaattaag 41260273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 599883 - 600042
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| ||| || | |||||||||| || |||  |||||||||||       |||||||||||| ||||||||||||| ||||    
T  599883 actaaaactgtcatttctatgcgtttctggaattggaaatagagagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttccattt 599981  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  599982 aaaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgtaattaag 600042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16578481 - 16578640
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |   |||||||||||||| |||| |||||||||||       |||||||||||| || |||||||||||||||    
T  16578481 actaaaactgtcatttctgtgcgtttctagtgttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaatgatgattttgttcgattt 16578579  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
     |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16578580 gaaaaagatataaccattttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaag 16578640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 249 - 387
Target Start/End: Complemental strand, 41158686 - 41158549
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||||||||||||| |||| ||  |||| ||||||||||||||||||  |||||| |||||    
T  41158686 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttaactttgaaggagaaatcttataaattacgaaaaattattgtc 41158588  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  41158587 ctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 41158549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 2208806 - 2208709
Alignment:
Q  71 atatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaat 168  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  2208806 atatagtttaaggacgattttgttcgatttaaaaaagataggacaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagtctaaat 2208709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 42244356 - 42244472
Alignment:
Q  270 tcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaa 369  Q
    ||||||||||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42244356 tcgcacgggttgaataacgtatttttttaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgtcctttataaatgtgaaaatcaa 42244454  T
Q  370 aggtgcgtaaaccaaaat 387  Q
    || |||||||||||||||    
T  42244455 agttgcgtaaaccaaaat 42244472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 5730910 - 5730819
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5730910 catatagtttaaggacgattttgtttgatttaaaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 5730819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 28254811 - 28254970
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||        ||||||||||  ||||||||||||||||||    
T  28254811 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaatt-atatagtttagggacgattttgttcgattt 28254909  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  28254910 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 28254970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 42035933 - 42035774
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| |||| ||||||| |||        ||||||||||  ||||||||||||||||||    
T  42035933 actaaaactgtcatttttgtgcgtttatggagttagaaatagggagataggactaaaattgcaaaatat-atatagtttatggacgattttgttcgattt 42035835  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || ||  ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42035834 aaaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 42035774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 248 - 386
Target Start/End: Complemental strand, 8763056 - 8762919
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| || ||||||||||||||| |||||||||  ||| ||||| |  |||| |||||||||||||||||||||||||||||||    
T  8763056 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttttttaaa-tttagttttgaaggagaaatcttataaattacagaaaattgttgt 8762958  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    | |||||||||||||||||||||| ||||||||||||||    
T  8762957 catttataaatgtgaaaatcaaagctgcgtaaaccaaaa 8762919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 18375557 - 18375694
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||||||||||||| ||||| |  |||| |||||||||||||||||| |||||||||||||    
T  18375557 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgtc 18375655  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
     ||||| |||||||||||||||  |||||||||||||||    
T  18375656 atttatcaatgtgaaaatcaaaactgcgtaaaccaaaat 18375694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 249 - 387
Target Start/End: Complemental strand, 36778522 - 36778385
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| ||||||||||||     
T  36778522 aactagttacaaacccgtgcttcgcacgggttgaataacgtatttttttaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgtt 36778424  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  36778423 ctttataaatgtgaaaattaaagctgcgtaaaccaaaat 36778385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 250 - 387
Target Start/End: Original strand, 40586443 - 40586579
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| |||||||||||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| |||||||||| ||     
T  40586443 actagttacaaacccgtgcttcgcacgggttgaataacgtatttttttaaaa-tttagttttgaaggagaaatcttataaattacggaaaattgttatca 40586541  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||| |||||||||||||||    
T  40586542 tttataaatgtgaaaatcaaagctgcgtaaaccaaaat 40586579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 250 - 386
Target Start/End: Complemental strand, 1945229 - 1945094
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| || ||||||||||||||| |||||||||  ||| ||||| |  |||| ||||||||||||||||||||||||||||||||     
T  1945229 actagttacaaacccgtgctttgcacgggttgaataacgtattttttttaaa-tttagttttgaaggagaaatcttataaattacagaaaattgttgtca 1945131  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    |||||||||||||||||||||| ||||||||||||||    
T  1945130 tttataaatgtgaaaatcaaagctgcgtaaaccaaaa 1945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 9796887 - 9796723
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||| |||  |||||||||||       |||||||||||  || |||||||||||||||    
T  9796887 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaa-catatagtttatggatgattttgttcgattt 9796789  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaa 166  Q
    |||| || || ||||| ||| |||||||||||||||||  ||||||||||||||||||||| ||||    
T  9796788 aaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaa 9796723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 44380735 - 44380849
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaag 371  Q
    |||| |||| ||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  44380735 gcacaggttaaataacgtattttttaaaa-atttagctccgaaggagaaatcttataaattacgaaaaattattgtcctttataaatgtgaaaatcaaag 44380833  T
Q  372 gtgcgtaaaccaaaat 387  Q
     |||||||||||||||    
T  44380834 ctgcgtaaaccaaaat 44380849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 269 - 387
Target Start/End: Complemental strand, 9474145 - 9474028
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    |||||||||||||||||| |||||||||  ||| ||||| |  |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9474145 ttcgcacgggttgaataacgtattttttttaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgtcctttataaatgtgaaaatca 9474047  T
Q  369 aaggtgcgtaaaccaaaat 387  Q
    ||| ||||||| |||||||    
T  9474046 aagctgcgtaatccaaaat 9474028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 15255993 - 15255855
Alignment:
Q  22 catttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataagaccattttc 121  Q
    |||||||| ||||||||||||||| |||| |||||||||||       |||||||||||  |||||||||||||||||||||| || || ||||| ||||    
T  15255993 catttatggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttc 15255895  T
Q  122 gtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  15255894 gtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 15255855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 35427197 - 35427356
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||| || | |||||||||||        ||||| ||||  |||||||||||||| |||    
T  35427197 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaat-atataatttagggacgattttgttcggttt 35427295  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || ||  ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  35427296 aaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 35427356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 41978902 - 41978764
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| |||   ||| |||||||||||||||||| ||||||||| |||| ||||||||  ||| ||| |||||||||||||| |||||||| |||    
T  41978902 aaactagttagaaactcgtgcttcgcacgggttgaataacgtatttttttaaaa-tttagctccaaaggagagatcttataaattacggaaaattgatgt 41978804  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    | |||| ||||||||||||||||| |||||||||||||||    
T  41978803 cttttagaaatgtgaaaatcaaagctgcgtaaaccaaaat 41978764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 386
Target Start/End: Original strand, 8160418 - 8160555
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| || ||||||||||||||| |||||||||   || ||||  |  |||| |||||||||||||||||||||||||||||||    
T  8160418 aaactagttacaaacccgtgctttgcacgggttgaataacgtatttttttttaa-tttaattttgaaggagaaatcttataaattacagaaaattgttgt 8160516  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    | |||||||||||||||||||||| ||||||||||||||    
T  8160517 catttataaatgtgaaaatcaaagctgcgtaaaccaaaa 8160555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 249 - 387
Target Start/End: Complemental strand, 7391364 - 7391223
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaa---aaaatttagctcagaagaagaaatcttataaattacagaaaattgtt 345  Q
    ||||||||| ||| | ||| |||||||||||||||||| || ||||||     ||||||||| |  |||| |||||||||||||||||  ||||||| ||    
T  7391364 aactagttacaaacccgtgcttcgcacgggttgaataacgtttttttttttttaaaatttagtttcgaaggagaaatcttataaattatggaaaattatt 7391265  T
Q  346 gtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  7391264 gtcctttataaatgtgaaaatcaaagttgcgtaaaccaaaat 7391223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 25361558 - 25361420
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| ||| |||||| |||||||  |||||||| |||| ||||| |  |||  |||||| ||||||||||| ||||||||||||    
T  25361558 aaactagttacaaacccgtgcttcacacgggatgaataacatatttttttaaaa-tttagtttcgaaagagaaattttataaattacggaaaattgttgt 25361460  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  25361459 cctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 25361420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 599693 - 599534
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||  |||||||||||       |||||| ||||  || |||||||||||||||    
T  599693 actaaaactgtcatttgtgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaa-catataatttagggatgattttgttcgattt 599595  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||||||||||||  |||||||||| ||||||||||    
T  599594 aaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaag 599534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 386
Target Start/End: Original strand, 25833996 - 25834133
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| || |||||| |||||||| |||||||||  ||| ||||| |  |||  |||||||||||||||||||||||||||||||    
T  25833996 aaactagttacaaacccgtgctttgcacggattgaataacgtattttttttaaa-tttagttttgaatgagaaatcttataaattacagaaaattgttgt 25834094  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    | |||||||||||||||||||||| |||||||| |||||    
T  25834095 catttataaatgtgaaaatcaaagctgcgtaaatcaaaa 25834133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 34799468 - 34799627
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||| |||||| ||||| |||||| ||||||||||||| | |||| |||||||||||       |||||||||||  ||| ||||||||||||||    
T  34799468 actaaaactatcatttatgtgcgtttatggagttggaaataggaagataggactaaaactgcaaaaaa-catatagtttagggacaattttgttcgattt 34799566  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||| | ||||||||||||  |||||||||||||||||||||    
T  34799567 aaaagaggtaggaccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaag 34799627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 35694332 - 35694421
Alignment:
Q  71 atatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||| ||||||||||||||||||||||||  || ||||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  35694332 atatagtttaaggacgattttgttcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaa 35694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 5731197 - 5731358
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| ||||||||||||||||       |||||||||||  ||||||||||||||||||    
T  5731197 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatagaactaaaactgcaaaaaa-catatagtttatggacgattttgttcgattt 5731295  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    | ||||| ||  |||| |||| ||||||||||||||||  | ||| |||||| ||||||||||    
T  5731296 ataaaaggtagaaccaatttcctgagttggtcaaaatgcaatgacaaaaagtataattaagtc 5731358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 42036156 - 42036293
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||||||| || ||||||||||| |   |||  |||||||||||       |||||||||||  ||||||||||||||||||    
T  42036156 actaaaactgtcatttttgtgcatttctggagttggaaatatgagaatacgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 42036255  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatg 138  Q
    |||| || ||||| ||||||||| ||||||||||||||    
T  42036256 aaaagaggtaagatcattttcgtaagttggtcaaaatg 42036293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6115495 - 6115655
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |  ||||| ||||| ||| |||||||||||||| |       |||||||||||  ||||||||||||||||||    
T  6115495 actaaaactgtcatttctgtgcgtttcttgagttgaaaataaggagatagaactaaaactacaaaaaaacatatagtttagggacgattttgttcgattt 6115594  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| ||||| ||||||||||||||   |||||||||||| ||||||||    
T  6115595 aaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaag 6115655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 7911001 - 7911172
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||| |||||| |  |||  |||||||||||        ||||||||||  ||||||||||||||||||    
T  7911001 actaaaactgtcatttctgtgcgtttatggagttgaaaatagagggatatgactaaaactgcaaaaaat-atatagtttagggacgattttgttcgattt 7911099  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaat 173  Q
    |||| || ||  ||||||||||||||||||||||||||  ||||  ||||||||||||||| ||| |||||||    
T  7911100 aaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaagccaagataaaat 7911172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 300 - 387
Target Start/End: Original strand, 25618549 - 25618636
Alignment:
Q  300 aaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||| |||||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  25618549 aaatgtagctccgaaggagaaattttataaattacggaaaattgttgtcctttataaatgtgaaaatcaaagctgggtaaaccaaaat 25618636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 41260646 - 41260818
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  41260646 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 41260744  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaata 174  Q
    |||| || || || || |||||||||||| ||||||||  | |||||||||| |||||||| | ||||| ||||    
T  41260745 aaaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgaccaaaagtataattaagcctaaatataata 41260818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 386
Target Start/End: Complemental strand, 32847216 - 32847102
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaag 371  Q
    ||||||||||||||| |||||||||   |||||||  |  |||| ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  32847216 gcacgggttgaataacgtatttttttttaaatttaattttgaaggagaaatcttataaattataaaaaattgttgtcatttataaatgtgaaaatcaaag 32847117  T
Q  372 gtgcgtaaaccaaaa 386  Q
     |||||||| |||||    
T  32847116 ctgcgtaaagcaaaa 32847102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 18049978 - 18050134
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    ||||||||| |||| ||||| ||| || ||||| ||||||||| |||| | |||||| ||       |||||||||||  ||||||||||||||||||||    
T  18049978 taaaactgttatttctgtgcgtttctggagttgaaaatagggagataggattaaaacagcaaaaaa-catatagtttagggacgattttgttcgatttaa 18050076  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    || || || ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  18050077 aagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 18050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 41531793 - 41531906
Alignment:
Q  273 cacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaagg 372  Q
    |||||||||||||| ||||||| |||||| |||| ||  |||  |||||||||||||||||| |||| |||||||| ||||||||||  ||||||||||     
T  41531793 cacgggttgaataacgtattttataaaaa-tttaacttcgaaagagaaatcttataaattacggaaagttgttgtcatttataaatggaaaaatcaaagt 41531891  T
Q  373 tgcgtaaaccaaaat 387  Q
    ||||| |||||||||    
T  41531892 tgcgttaaccaaaat 41531906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 16578256 - 16578110
Alignment:
Q  14 tttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataaga 113  Q
    ||||| ||| ||| || ||||||||||||||| |||| || ||||||||       |||||| ||||  |||||||||||||||||||||| || || ||    
T  16578256 tttttttgcgtttctggagttggaaatagggagataggaccaaaactgcaaaaaa-catataatttagggacgattttgttcgatttaaaagaggtagga 16578158  T
Q  114 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||| |||||||||||||||||||||  || ||||||| ||||||||||    
T  16578157 ccaatttcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaag 16578110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 4464376 - 4464491
Alignment:
Q  272 gcacgggttgaataatgtattttttaaa-aaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaa 370  Q
    ||||||||||||||| |||||||||    |||||||| |  ||||  |||||||||||||| ||  |||||| |||||||||||||||||||||||||||    
T  4464376 gcacgggttgaataacgtattttttttttaaatttagtttcgaaggtgaaatcttataaat-acgaaaaattattgtcctttataaatgtgaaaatcaaa 4464474  T
Q  371 ggtgcgtaaaccaaaat 387  Q
    | |||||||||||||||    
T  4464475 gctgcgtaaaccaaaat 4464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 35694031 - 35693870
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnnc-atatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| ||||||||||          ||||||||||  ||||||||| |||||||    
T  35694031 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgaaaaaaatatatatagtttatggacgattttattcgatt 35693932  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| || ||  | ||||||||| | ||||||||||||  |||| ||||||||||||||||    
T  35693931 taaaagaggtagaatcattttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaag 35693870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 7910709 - 7910618
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| ||||  |||||||||||||||||||||| || ||  ||||||||||||||||| ||||||||  |||||||||| ||||||||||    
T  7910709 catataatttagggacgattttgttcgatttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaag 7910618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 35426893 - 35426845
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35426893 gaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 35426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 28877359 - 28877432
Alignment:
Q  87 attttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||| |||| ||| || ||  ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  28877359 attttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 26252970 - 26252838
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||| ||||||||| || || ||| || ||||||||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  26252970 actaaatctgtcatttctgagcgtttctggagttggaaatagggagataggactaaaactgc-acaaaacatatagtttagggacgattttgttcgattt 26252872  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaa 134  Q
    |||| ||||   |||| |||||||| || |||||    
T  26252871 aaaagagatgttaccaatttcgtgaattagtcaa 26252838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 10047092 - 10047155
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaa 136  Q
    |||||||| |||| |||||||||||||||||| | | ||||| |||||||||||||| ||||||    
T  10047092 atagtttagagaccattttgttcgatttaaaagaaacaagactattttcgtgagttgatcaaaa 10047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35426974 - 35426925
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatag 50  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||| ||||    
T  35426974 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatag 35426925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 18805238 - 18805167
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||| |||  | |||||||||||||| | |||||||||   |||||||||||||||||||    
T  18805238 ttttgttcgatttaaaagagaaga-accattttcgtgagcttgtcaaaatgcagggaccaaaagtgtaattaa 18805167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 305
Target Start/End: Original strand, 2680233 - 2680291
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    ||||||||||| ||| | ||| |||||||||||||||| | ||||||||| ||||||||    
T  2680233 aaaactagttacaaacccgtgcttcgcacgggttgaattacgtatttttttaaaaattt 2680291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35694255 - 35694313
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaac 59  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||  ||||||||    
T  35694255 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataagactaaaac 35694313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 41908053 - 41907996
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    |||||||||| ||| | ||| ||||||||||||||||||| ||| || ||||||||||    
T  41908053 aaactagttacaaacccgtgcttcgcacgggttgaataatatatcttataaaaaattt 41907996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 2680364 - 2680396
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaa 301  Q
    ||||||||||||||||||||||||||| |||||    
T  2680364 ttcgcacgggttgaataatgtatttttcaaaaa 2680396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 2961008 - 2961064
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||| || ||||||||||    
T  2961008 aactagttacaaacccgtgcttcgcacgggttgaataacgtatcttgtaaaaaattt 2961064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 9930112 - 9930200
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| || ||| ||||||||| |||| |||| |  | ||||| |||||||||| || ||||||   |||||||||||||||||||||    
T  9930112 atagttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaag 9930200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 9e-52; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 25472397 - 25472557
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || || |||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  25472397 actaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 25472496  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25472497 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaag 25472557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 5114629 - 5114470
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||  ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  5114629 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 5114531  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  5114530 aaaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaag 5114470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 247 - 387
Target Start/End: Complemental strand, 35160167 - 35160028
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||| ||||| |  ||||||||||||||||||||||| ||||||  |||    
T  35160167 aaaactagttacaaatccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttagtttcgaagaagaaatcttataaattacggaaaatgattg 35160069  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    || |||||||||||||||||||||| |||||||||||||||    
T  35160068 tcatttataaatgtgaaaatcaaagctgcgtaaaccaaaat 35160028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 15043827 - 15043964
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| ||||||||| |||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||  |||||||||||     
T  15043827 aactagttacaaacccgtgcttcgcacggattgaataacgtattttttaaaa-atttagctccgaaggagaaatcttataaattacgaaaaattgttgtt 15043925  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  15043926 ctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 15043964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 24640570 - 24640728
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||| ||||||||||| ||||| |||  | ||||||||||||||| |||  |||||||||||       |||||||||||| ||||||||||||||||||    
T  24640570 actagaactgtcatttctgtgcgttttcggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 24640668  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||    
T  24640669 aaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtataattaa 24640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 247 - 387
Target Start/End: Original strand, 33319563 - 33319703
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||||| ||||| ||| |||||||| |||||||||  ||||||||||||||||||  |  ||||||||||||||||||||||| ||||||| |||    
T  33319563 aaaactagttacaaatccgtgcttcgcacgagttgaataacatattttttaaaaaatttaatttcgaagaagaaatcttataaattacggaaaattattg 33319662  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    || ||||||||||||||||| |||| |||||||| ||||||    
T  33319663 tcatttataaatgtgaaaattaaagttgcgtaaatcaaaat 33319703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 30251076 - 30251236
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||| ||||||||| ||||| ||| || ||||||||||||||| |||  ||||||||| |       || ||||||||| ||||||||||||||||||    
T  30251076 actaaatctgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactacaaaaatacaaatagtttaaggacgattttgttcgattt 30251175  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||| ||||| |||||||||||||||| |||||| ||||||||||||||||    
T  30251176 aaaaaagatatgacaatttttgtgagttggtcaaaatagtaggatcaaaagtgtaattaag 30251236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 246 - 387
Target Start/End: Complemental strand, 24447840 - 24447700
Alignment:
Q  246 taaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgtt 345  Q
    |||||||||||| ||| | ||| |||||||||||||||||| |||||||||||||| ||||  || |||| |||||||||||||||||| ||||||||||    
T  24447840 taaaactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttaattccgaaggagaaatcttataaattacggaaaattgtt 24447742  T
Q  346 gtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||| | |||||||||||||  ||||||||| |||||    
T  24447741 gtcctttatcattgtgaaaatcaaaactgcgtaaactaaaat 24447700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 5120856 - 5121013
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    |||||||||||||| ||||| |||||| ||||||||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||||    
T  5120856 taaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaa 5120954  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    || || || ||  | |||||||||||||||||||||  |||||||||||||||||||||    
T  5120955 aagaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 5121013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 247 - 387
Target Start/End: Original strand, 6966234 - 6966374
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||||| ||| | ||| |||||||||||||||||| ||||| ||||||||||||| ||| ||||||    | |||||||||||  ||||||||||    
T  6966234 aaaactagttacaaacccgtgcttcgcacgggttgaataacgtattatttaaaaaatttaactccgaagaattttttttataaattacgaaaaattgttg 6966333  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    | ||||||||||||||||||||||| |||||||||||||||    
T  6966334 ttctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 6966374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 31073527 - 31073686
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||  ||| ||||||||||||||    
T  31073527 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcacaaaa-catatagtttagggacaattttgttcgattt 31073625  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| ||||||||| |||||||||||  |||||||||||||||||||||    
T  31073626 aaaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaag 31073686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 245 - 386
Target Start/End: Original strand, 4895957 - 4896097
Alignment:
Q  245 ataaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgt 344  Q
    ||||||||||||| |||   ||| || ||||| ||||||||| ||||||||| |||| ||||| || |||| |||||||||||||||||| |||||||||    
T  4895957 ataaaactagttacaaacacgtgctttgcacgagttgaataacgtatttttttaaaa-tttagttctgaaggagaaatcttataaattacggaaaattgt 4896055  T
Q  345 tgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    |  |||||||||||||||||||||||| ||||||||||||||    
T  4896056 taccctttataaatgtgaaaatcaaagttgcgtaaaccaaaa 4896097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 31573886 - 31573722
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn---catatagtttaaagacgattttgttcga 97  Q
    |||||||||||||||| | ||| ||| || ||||||||||||||| |||| |||||||||||          ||||||||||||  ||||||||||||||    
T  31573886 actaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcga 31573787  T
Q  98 tttaaaaaaga-taagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||| | || ||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  31573786 tttaaaaaaaaataggactattttcgtgagttggtcaaaatggtaggaccaaaagtataattaag 31573722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 250 - 387
Target Start/End: Complemental strand, 4110102 - 4109961
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttt----taaaaaatttagctcagaagaagaaatcttataaattacagaaaattgtt 345  Q
    |||||||| ||| | ||| |||||||||||||||||| ||||||||    |    |||||||||  |||| |||||||||||||||||||||||||||||    
T  4110102 actagttacaaacccgtgcttcgcacgggttgaataacgtatttttattttttttaatttagcttcgaaggagaaatcttataaattacagaaaattgtt 4110003  T
Q  346 gtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  4110002 gtcctttataaatgtgaaaatcaaagctgtgtaaaccaaaat 4109961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 371
Target Start/End: Original strand, 9978727 - 9978828
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    ||||||||||||||||||  ||||||||||||| ||||| |  |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9978727 ttcgcacgggttgaataacatattttttaaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgtcctttataaatgtgaaaatca 9978825  T
Q  369 aag 371  Q
    |||    
T  9978826 aag 9978828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 387
Target Start/End: Complemental strand, 1222426 - 1222289
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| |||||| || |||||||| ||||||||| |||||||||| || |||  |||||||||||||||||  ||||||||||||||    
T  1222426 actagttacaaacccgtgcttcgcatggattgaataacgtatttttttaaaaatttagttccgaatgagaaatcttataaattatggaaaattgttgtcc 1222327  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||| |||||||||||||||  ||||||||| |||||    
T  1222326 tttatcaatgtgaaaatcaaaactgcgtaaactaaaat 1222289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 25469010 - 25468852
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgattta 101  Q
    |||||||||||||| ||||| ||| || | ||  ||||||||| |||| |||||||||||        |||||||||||  |||||||||||||||||||    
T  25469010 taaaactgtcatttctgtgcgtttctggaatttaaaatagggagataggactaaaactgcaagaaaaacatatagtttagggacgattttgttcgattta 25468911  T
Q  102 aaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||| ||||| ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  25468910 aaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaa 25468852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 29891465 - 29891628
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||| |||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||| ||||    
T  29891465 actaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcaattt 29891563  T
Q  101 aaa-aaagataa---gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||| ||| | ||   ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  29891564 aaataaataaaaaaggaccattttcacgagttggtcaaaatggtaggaccaaaagtgtaattaag 29891628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 31574110 - 31574269
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| ||||| ||| || ||||| ||||||||| |||  |||||||||||       |||||||||||  ||||||||||||||||||    
T  31574110 actaaaattgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 31574208  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||| | |||||||||||||||||||||  |||||||||||||||||||||    
T  31574209 aaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 31574269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 278 - 387
Target Start/End: Complemental strand, 14833065 - 14832957
Alignment:
Q  278 gttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgt 377  Q
    |||||||||||||||||||  ||| ||||||||  ||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||    
T  14833065 gttgaataatgtattttttttaaa-tttagctcttaaggaaaaatcttataaattacggaaaattgttgtcttttataaatgtgaaaatcaaagctacgt 14832967  T
Q  378 aaaccaaaat 387  Q
    |||| |||||    
T  14832966 aaactaaaat 14832957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 312 - 387
Target Start/End: Original strand, 9735758 - 9735833
Alignment:
Q  312 gaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||||||||    
T  9735758 gaaggagaaatcttataaattacggaaaattgttgtcttttataaatgtgaaaatgaaagctgcgtaaaccaaaat 9735833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 387
Target Start/End: Complemental strand, 18320749 - 18320632
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    ||||||||| || ||||| |||||||||||||| ||||| || |||  |||||||||||||||||  ||||||||||||| ||||| |||||||||||||    
T  18320749 ttcgcacggattaaataacgtattttttaaaaa-tttagttccgaatgagaaatcttataaattatggaaaattgttgtcttttatcaatgtgaaaatca 18320651  T
Q  369 aaggtgcgtaaaccaaaat 387  Q
    ||  ||||||||| |||||    
T  18320650 aaactgcgtaaactaaaat 18320632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 28636435 - 28636294
Alignment:
Q  18 tgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataagaccat 117  Q
    |||||||||||| ||||||||||||||| |||  |||||||||||       |||||||||||   ||||||||||||||||||||| |  ||||||||     
T  28636435 tgtgcatttatggagttggaaatagggagatatgactaaaactgcaaaaa--catatagtttaggaacgattttgttcgatttaaaagaagtaagaccaa 28636338  T
Q  118 tttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||||||||   | |||||||| ||||||||||    
T  28636337 tttcgtgagttggtcaaaatacaatgaccaaaaatgtaattaag 28636294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 31073222 - 31073145
Alignment:
Q  84 acgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||||||||||   |||||||||||||||||||||    
T  31073222 acgattttgttcgatttaaaaaagataggaccattttcatgtgttggtcaaaattaaaggaccaaaagtgtaattaag 31073145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 29891241 - 29891082
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||||| ||||| ||        |||||||||||  |||| ||||||||| |||    
T  29891241 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaattaaaattg-taaaaaacatatagtttagggacgcttttgttcggttt 29891143  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || || || |||||| |||| |||||||||  |||| ||||||||||||||||    
T  29891142 aaaagaggtatgatcaatttcgtaagttagtcaaaatgtaaggaacaaaagtgtaattaag 29891082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 32836449 - 32836546
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaa 167  Q
    |||| |||||||  ||| ||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  ||||| ||||||||||||||| |||||    
T  32836449 catacagtttaagaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaaaagtgtaattaagccaaaa 32836546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 35163264 - 35163187
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| ||||||||||||| ||| ||| ||||||||||| ||||| |||||||||||  ||||| ||||||||||||||    
T  35163264 gacggttttgttcgatttgaaagagacaagaccatttttgtgagctggtcaaaatgcgaggactaaaagtgtaattaa 35163187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 35163640 - 35163731
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  |||||||||||| ||||| ||| ||  |  |||||||||||||| |||||||||||   ||||||||||||||||||||    
T  35163640 catatagtttagggacgattttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaag 35163731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 22534219 - 22534273
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaa 166  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||| ||||    
T  22534219 gaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagccaaa 22534273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 31242878 - 31242809
Alignment:
Q  91 tgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||||||||  | || ||||||||||||||||||||||||  |||  |||||||||||||||    
T  31242878 tgttcgatttaaaaaaggcaggatcattttcgtgagttggtcaaaatgcgagggtcaaaagtgtaattaa 31242809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 835469 - 835396
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||| ||  ||||||||||||||||| || | ||||||  ||||||||||||| |||||||    
T  835469 ttttgttcgatttgaaagaggcaagaccattttcgtgagctgctaaaaatgtgaggaccaaaagtgcaattaag 835396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28636581 - 28636642
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgc 62  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||  |||||||||||    
T  28636581 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactgc 28636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 30250772 - 30250723
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| |||||||||||||||||||||  |||||||||| ||||||||||    
T  30250772 gaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaag 30250723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 18297662 - 18297734
Alignment:
Q  90 ttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagt 162  Q
    |||||| |||||||||||| | ||||| |||||||||||||| |||||   | ||| ||||||||||||||||    
T  18297662 ttgttcaatttaaaaaagagatgaccaatttcgtgagttggttaaaattcgaagactaaaagtgtaattaagt 18297734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 33095804 - 33095716
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||| ||||||||||||| ||| || | |||||||||||| ||| || | ||||||  ||||||||||||| |||||||    
T  33095804 atagtttagggacggttttgttcgatttgaaagaggtgagaccattttcgcgagctgataaaaatgcgaggaccaaaagtgcaattaag 33095716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 305
Target Start/End: Complemental strand, 33319094 - 33319035
Alignment:
Q  246 taaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    |||||||||||| ||| | ||| |||||||||||||||||| |||| || ||||||||||    
T  33319094 taaaactagttacaaacccgtgcttcgcacgggttgaataacgtatcttgtaaaaaattt 33319035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 22975720 - 22975770
Alignment:
Q  252 tagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    |||||| ||||||||| |||||||||||||||||| |||| || |||||||    
T  22975720 tagttacaaatctgtgcttcgcacgggttgaataacgtatcttgtaaaaaa 22975770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 23812681 - 23812631
Alignment:
Q  252 tagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    |||||| ||||||||| |||||||||||||||||| |||| || |||||||    
T  23812681 tagttacaaatctgtgcttcgcacgggttgaataacgtatcttgtaaaaaa 23812631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 28472688 - 28472626
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaata 174  Q
    ||||| ||||||||||||| |||||    ||||||||||||||||||||| | ||||||||||    
T  28472688 gaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaaataaaata 28472626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 29859877 - 29859815
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaata 174  Q
    ||||| ||||||||||||| |||||    ||||||||||||||||||||| | ||||||||||    
T  29859877 gaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaaataaaata 29859815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 302
Target Start/End: Complemental strand, 11272804 - 11272751
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    ||||||||| ||||| ||| |||||||| |||||||||||||| || |||||||    
T  11272804 aactagttacaaatccgtgcttcgcacgagttgaataatgtatcttgtaaaaaa 11272751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 32836087 - 32836010
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| ||||||||||||| ||| ||  | |||| |||| ||||| |||||||||||  |||| |||||||||||||||    
T  32836087 gacggttttgttcgatttgaaagaggcaggaccgtttttgtgagctggtcaaaatgcaaggatcaaaagtgtaattaa 32836010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 4425953 - 4425897
Alignment:
Q  246 taaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    |||||||||||| ||| | |||||||||||||||||| ||| |||| || |||||||    
T  4425953 taaaactagttacaaacccgtgtttcgcacgggttgactaacgtatcttgtaaaaaa 4425897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 11277105 - 11277137
Alignment:
Q  141 aggaccaaaagtgtaattaagtcaaaataaaat 173  Q
    ||||||||||||||||||||| |||||||||||    
T  11277105 aggaccaaaagtgtaattaagccaaaataaaat 11277137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30250852 - 30250808
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaataggga 45  Q
    |||||||||||||||| ||||| ||| || |||||||||||||||    
T  30250852 actaaaactgtcatttctgtgcgtttctgtagttggaaataggga 30250808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 33979226 - 33979174
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    |||||||| ||| | |||||||||||||||| ||||| ||||||| |||||||    
T  33979226 actagttacaaacccgtgtttcgcacgggtttaataacgtattttgtaaaaaa 33979174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 35042046 - 35041986
Alignment:
Q  242 ataataaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    |||||| ||||||||| ||| | |||||||||||||||| ||||| ||||||  |||||||    
T  35042046 ataatataactagttacaaacccgtgtttcgcacgggttcaataacgtatttgataaaaaa 35041986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 9e-52; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 21034397 - 21034237
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||| |||  ||||||||||        |||||||||||| ||||||||||||||||||    
T  21034397 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgattt 21034298  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21034297 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 21034237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 56077709 - 56077868
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||| ||| |  ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  56077709 actaaaactgtcatttttgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 56077807  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  56077808 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaag 56077868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 26974445 - 26974285
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| ||||||||||        |||||||||||| ||||||||||||||||||    
T  26974445 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgattt 26974346  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  26974345 aaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaag 26974285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 28465466 - 28465630
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||||  |||| ||||| |||||| ||||||||||||||| |||| ||||||| |||       |||||||||||| ||||||||||||||||||    
T  28465466 actaaaactgctatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 28465564  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaa 166  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28465565 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaaa 28465630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 34789543 - 34789379
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| ||||| ||| || |||| |||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  34789543 actaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 34789445  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaa 166  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34789444 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaaa 34789379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 247 - 387
Target Start/End: Complemental strand, 51348111 - 51347972
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||| |||| | ||| |  |||| ||||||||||||||||||||||||||||||    
T  51348111 aaaactagttacaaacccgtgtttcgcacgggttgaataatgtatttttttaaaa-tatagtttcgaaggagaaatcttataaattacagaaaattgttg 51348013  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  51348012 tcctttataaatgtgaaaatcaaagctgcgcaaaccaaaat 51347972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 54440954 - 54441115
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||   |||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  54440954 actaaaactgtcattgacgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 54441052  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  54441053 aaaaaagataggaccattttcgtgagctgatcaaaatggtaggaccaaaagtgtaattaagtc 54441115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 250 - 387
Target Start/End: Original strand, 12680630 - 12680771
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtatttttt----aaaaaatttagctcagaagaagaaatcttataaattacagaaaattgtt 345  Q
    |||||||| ||| | ||| |||||||||||||||||| |||||||||    |||||||||||| |||||| |||||||||||||||||| ||||||| ||    
T  12680630 actagttacaaacccgtgcttcgcacgggttgaataacgtatttttttttaaaaaaatttagcccagaaggagaaatcttataaattacggaaaattatt 12680729  T
Q  346 gtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  12680730 gtcctttataaatgtgaaaatcaaagttgcgtaaaccaaaat 12680771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 12593185 - 12593026
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||| | ||||| |||       |||||||||||| ||||||||||||||||||    
T  12593185 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 12593087  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12593086 aaaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaag 12593026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 14440213 - 14440372
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||||| |||  |||||||||||       |||||||||||| || |||||||||||||||    
T  14440213 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaa-catatagtttaaggatgattttgttcgattt 14440311  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  14440312 aaaaaagataggaccattttcgtaagttggtcaaaatggtaggaccaaaagtataattaag 14440372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 34789767 - 34789929
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||  ||| ||||||||||||||    
T  34789767 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacaattttgttcgattt 34789866  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||| || || ||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  34789867 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagtc 34789929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 45838932 - 45839092
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn--catatagtttaaagacgattttgttcgat 98  Q
    |||||||||||||||| ||||| ||| || ||||||||||||| | |||| |||||||||||         |||||||||||| ||||||||||||||||    
T  45838932 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 45839031  T
Q  99 ttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  45839032 ttaaaaaagataggacca-tttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 45839092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 250 - 387
Target Start/End: Complemental strand, 8532265 - 8532132
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||||| ||| |||||||||||||||||| ||||||     ||||||||||||||||| |||||| ||||||||||| ||||||| ||||||    
T  8532265 actagttacaaatccgtgcttcgcacgggttgaataacgtatttc----aaaatttagctcagaaggagaaattttataaattacggaaaattattgtcc 8532170  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||| |||||||||||||||    
T  8532169 tttataaatgtgaaaatcaaagctgcgtaaaccaaaat 8532132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 246 - 386
Target Start/End: Original strand, 9887267 - 9887406
Alignment:
Q  246 taaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgtt 345  Q
    |||||||||||| ||| | ||| || ||||||||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||||||||||||||    
T  9887267 taaaactagttacaaacccgtgctttgcacgggttgaataacgtatttttttaaaa-tttagttttgaaggagaaatcttataaattacagaaaattgtt 9887365  T
Q  346 gtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    ||| |||||||||||||||||||||| ||||||||||||||    
T  9887366 gtcatttataaatgtgaaaatcaaagctgcgtaaaccaaaa 9887406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 19529078 - 19529238
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| | |||||||||||| ||| ||||||||||||||||       |||||||||||||||||||||||||| ||||    
T  19529078 actaaaactgtcatttctgtgcgttttttaagttggaaatatggagatagaactaaaactgcaaaaaaacatatagtttaaagacgattttgttcaattt 19529177  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| |||||  | ||||||  | |||||||||||||||||||| ||||||||||||||||    
T  19529178 aaaagagatagaatcatttttataagttggtcaaaatggtaggagcaaaagtgtaattaag 19529238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 21034621 - 21034781
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||  ||| || ||||||||||||||| ||||||||||||||||        |||||||| |  ||||||||||||||||||    
T  21034621 actaaaactgtcatttttgtgtgtttctggagttggaaatagggagatagaactaaaactgcaaaaaaaaatatagttcagggacgattttgttcgattt 21034720  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| ||||| ||||| |||||||||||||||||||||  |||||||||| ||||||||||    
T  21034721 aaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaag 21034781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 55677342 - 55677502
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||| |||| ||||||| ||        ||||||||||| |||||||||||||||||||    
T  55677342 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaattgtaaaaaaacatatagtttagagacgattttgttcgattt 55677441  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| ||||||||||||||||||||   |||||||||||||||||||||    
T  55677442 aaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaag 55677502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 6616834 - 6616675
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || |||||||||||| ||  ||| ||||| || ||       |||||||||||| ||||||||||||||||||    
T  6616834 actaaaactgtcatttatgtgcgtttctggagttggaaatagagaggtaggactaacacagcaaaaaaacatatagtttaaggacgattttgttcgattt 6616735  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  6616734 aaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaa 6616675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 54440730 - 54440571
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||| |||| |||||||||||        | ||||||||  ||||||||||||||||||    
T  54440730 actaaaactgtcatttctgtgcatttctgaagttgaaaatagggagataggactaaaactgcaaaaa---acatagtttagggacgattttgttcgattt 54440634  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||| || || ||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  54440633 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagtc 54440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 249 - 387
Target Start/End: Complemental strand, 2118233 - 2118095
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtatttttta-aaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||||||||  |||||||||| || ||| ||||||| |||||||| || ||||||||||||    
T  2118233 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttttttaaaaatttagttccgaaaaagaaatattataaat-acggaaaattgttgt 2118135  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  2118134 cctttataaatgtgaaaatcaaagttgcgtaaaccaaaat 2118095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 41114320 - 41114160
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgatt 99  Q
    ||||||| |||||||| ||||| ||| |  ||||||||||||||| |||  |||||||||||        |||||||||||| |||| ||||||||||||    
T  41114320 actaaaattgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgtttttgttcgatt 41114221  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  41114220 taaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagtgtcattaa 41114160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 249 - 387
Target Start/End: Complemental strand, 5759384 - 5759247
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| ||||| ||||||||||||| ||| |||| | ||| ||||||||||||  |||||||||||     
T  5759384 aactagttacaaacccgtgcttcgcacgggttgaataacgtattatttaaaaaatttaactccgaaggaaaaa-cttataaattacgaaaaattgttgtt 5759286  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5759285 ctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 5759247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 46736816 - 46736657
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||| | |||| ||||       |||||||||||| ||| ||||||||||||||    
T  46736816 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaatctgcaaaaaa-catatagtttaaggacaattttgttcgattt 46736718  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  46736717 aaaaaaaataagaccattttcgtgagttggtcaaaatagtagaaccaaaagtataattaag 46736657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 250 - 387
Target Start/End: Complemental strand, 3759321 - 3759185
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| |||||||||||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||  |||||||||||||     
T  3759321 actagttacaaacccgtgcttcgcacgggttgaataacgtatttttttaaaa-tttagtttcgaaggagaaatcttataaattatggaaaattgttgtca 3759223  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||| |||||||||||||||    
T  3759222 tttataaatgtgaaaatcaaagctgcgtaaaccaaaat 3759185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 249 - 386
Target Start/End: Complemental strand, 8989243 - 8989107
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | |||||| |||||||||||||||  ||||||||  ||| ||||| |  |||| ||||||||||||||||||||||||||||||||    
T  8989243 aactagttacaaacccgtgttttgcacgggttgaataacatattttttttaaa-tttagttttgaaggagaaatcttataaattacagaaaattgttgtc 8989145  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
     |||||||||||||||||||||| ||||||||||||||    
T  8989144 atttataaatgtgaaaatcaaagctgcgtaaaccaaaa 8989107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 248 - 361
Target Start/End: Original strand, 35707656 - 35707769
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| |||||||||||||||||| ||||||||| |||||||||| || |||| |||||||||||||||||| ||||||||||||    
T  35707656 aaactagttacaaacccgtgcttcgcacgggttgaataacgtatttttttaaaaatttagttctgaaggagaaatcttataaattacggaaaattgttgt 35707755  T
Q  348 cctttataaatgtg 361  Q
    ||||||||||||||    
T  35707756 cctttataaatgtg 35707769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 28166163 - 28166007
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    ||||||| |||||| ||||| ||| || ||||| ||||||||| |||| |||||||||||        ||||||||||| ||| ||||||||||||||||    
T  28166163 taaaactatcatttctgtgcgtttttgtagttgaaaatagggagataggactaaaactgcaaaaaaa-atatagtttaaggacaattttgttcgatttaa 28166065  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||    
T  28166064 aaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaa 28166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 12593408 - 12593567
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||  ||||| ||| || ||||| ||||||||| |||| |||||||||||        |||||||||| |||||||||||||||||||    
T  12593408 actaaaactgtcattcctgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaat-atatagtttacagacgattttgttcgattt 12593506  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  12593507 aaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 12593567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 17741706 - 17741568
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | |||||||||| | ||||||||| |||| |||| |||| ||||| |  |||| |||||||||||||||||| ||||||||||||    
T  17741706 aaactagttacaaacccgtgtttcgcatgagttgaataacgtatctttttaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgt 17741608  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  17741607 cctttataaatgtgaaaatcaaagctgtgtaaaccaaaat 17741568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 19529031 - 19528871
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||  | ||||||||||||||| |||| |||||||||||       |||||||||||  ||||||||| ||||||||    
T  19529031 actaaaactgtcatttctgtgcgtttccggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacgattttattcgattt 19528932  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||| ||||||||||||  |||||||||||||||||||||    
T  19528931 aaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaag 19528871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 34807278 - 34807118
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||| ||| |||| |||||||||||       |||||| ||||  ||||||||||||||||||    
T  34807278 actaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaacatatactttagggacgattttgttcgattt 34807179  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||| ||||||||  |||||||||||||||||||||    
T  34807178 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaag 34807118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 269 - 387
Target Start/End: Complemental strand, 24549445 - 24549328
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    |||||||||||||||||| ||||||||| |||| ||||| |  |||| |||||| ||||||||||| ||||||||||||||||||||||||||||||| |    
T  24549445 ttcgcacgggttgaataacgtatttttttaaaa-tttagtttcgaaggagaaatgttataaattacggaaaattgttgtcctttataaatgtgaaaatga 24549347  T
Q  369 aaggtgcgtaaaccaaaat 387  Q
    ||| |||||||||||||||    
T  24549346 aagctgcgtaaaccaaaat 24549328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 30527587 - 30527724
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||| ||||||||||||| |||||||||  ||| ||||| |  |||| |||||||||||||||||| |||||||||||||    
T  30527587 aactagttacaaacccgtgcttcgtacgggttgaataacgtattttttttaaa-tttagttttgaaggagaaatcttataaattacggaaaattgttgtc 30527685  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  30527686 ctttataaatatgaaaatcaaagctgcgtaaaccaaaat 30527724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 249 - 386
Target Start/End: Complemental strand, 8964876 - 8964740
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| || ||||||||||||||| |||||||||  ||| ||||| |  |||  ||||||||||||||||||||||||||||||||    
T  8964876 aactagttacaaacccgtgctttgcacgggttgaataacgtattttttttaaa-tttagttttgaatgagaaatcttataaattacagaaaattgttgtc 8964778  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
     |||||||||||||||||||||| ||||||||||||||    
T  8964777 atttataaatgtgaaaatcaaagctgcgtaaaccaaaa 8964740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 14439989 - 14439831
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||  ||||||||||||  ||||    
T  14439989 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgtttaattt 14439891  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||| || ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  14439890 aaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 249 - 386
Target Start/End: Complemental strand, 16653237 - 16653101
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| || ||||||||||||||| |||||||||  ||| ||||| |  |||| ||||||||||||||||||||||||||||||||    
T  16653237 aactagttacaaacccgtgctttgcacgggttgaataacgtattttttttaaa-tttagttttgaaggagaaatcttataaattacagaaaattgttgtc 16653139  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
     |||||||||||||||||||||| ||||||||| ||||    
T  16653138 atttataaatgtgaaaatcaaagctgcgtaaactaaaa 16653101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 24851407 - 24851318
Alignment:
Q  72 tatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24851407 tatagtttaaggacgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaag 24851318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 250 - 387
Target Start/End: Original strand, 39713496 - 39713632
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| |||||||||||||||||| |||||||||||||| ||||  || |||| |||||||||||||||||  |||||||||||||     
T  39713496 actagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttaattccgaaggagaaatcttataaattatggaaaattgttgtct 39713594  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||| |||||||||||||||  |||||||||||||||    
T  39713595 tttatcaatgtgaaaatcaaaactgcgtaaaccaaaat 39713632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 28465242 - 28465081
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||  |||||||||||       |||||||||||| ||||||||||||||||||    
T  28465242 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 28465144  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||| || || || || |||||| ||||||||||||||| ||||| |||||||||||||||||    
T  28465143 aaaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaagtc 28465081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 269 - 386
Target Start/End: Complemental strand, 43024052 - 43023933
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaa--aaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaat 366  Q
    ||||||||||||||||||||||||||||     |||||||| ||  ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  43024052 ttcgcacgggttgaataatgtatttttttttttaaatttagttctaaaggagaaatcttataaattacggaaaattattgtcctttataaatgtgaaaat 43023953  T
Q  367 caaaggtgcgtaaaccaaaa 386  Q
    ||||| ||||||||||||||    
T  43023952 caaagttgcgtaaaccaaaa 43023933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 250 - 361
Target Start/End: Original strand, 574177 - 574288
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| |||||||||||||||||| |||||||||  ||||||||| || |||| |||||||||||||||||| ||||||||||||||    
T  574177 actagttacaaacccgtgcttcgcacgggttgaataacgtattttttttaaaatttagttctgaaggagaaatcttataaattacggaaaattgttgtcc 574276  T
Q  350 tttataaatgtg 361  Q
    ||||||||||||    
T  574277 tttataaatgtg 574288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 24944173 - 24944267
Alignment:
Q  292 tttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    ||||| |||||||||| |  |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24944173 ttttttaaaaatttagttatgaaggagaaatcttataaattacggaaaattgttgtcctttataaatgtgaaaatcaaagctgcgtaaaccaaaa 24944267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 33689989 - 33689831
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||| |||||||||| ||||| ||| || ||||| ||||||||| |||  |||||||||||       |||||||||||| ||||||||||||||||||    
T  33689989 actaacactgtcatttatgtgcgtttctggagttgtaaatagggagatatgactaaaactgcaaaaa--catatagtttaaggacgattttgttcgattt 33689892  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| ||| |||||||||||||||||  |||||||||||||||||||||    
T  33689891 aaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 33689831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 33777725 - 33777635
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||| |||||||||||||||||| ||||| ||| || |||||||||||||||||||||||||||||| |||||||||||||||    
T  33777725 catatagtttaaggacgattttgttcgattttaaaaaaatatgatcattttcgtgagttggtcaaaatggtaggaacaaaagtgtaattaa 33777635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 36168716 - 36168875
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||||| |||| |||||||||||| ||||| ||||||||| |||| |||||||| ||       |||||| |||||  |  ||||||||| ||||    
T  36168716 actaaaactgtgatttatgtgcatttatggagttgaaaatagggagataggactaaaaccgcaaaaaa-catataatttaagaataattttgttctattt 36168814  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| ||| || |||||||||||||||||||||||||||||||||| ||||||||||||    
T  36168815 aaaaaaaataggatcattttcgtgagttggtcaaaatggtaggaccaagagtgtaattaag 36168875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 386
Target Start/End: Complemental strand, 37352144 - 37352007
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| || |||| |||||||||| |||||||||  ||| ||||| |  |||  |||||||||||||||||||||||||||||||    
T  37352144 aaactagttacaaacccgtgctttgcacaggttgaataacgtattttttttaaa-tttagttttgaatgagaaatcttataaattacagaaaattgttgt 37352046  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    | |||||||||||||||||||||| ||||||||||||||    
T  37352045 catttataaatgtgaaaatcaaagctgcgtaaaccaaaa 37352007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 386
Target Start/End: Complemental strand, 37357043 - 37356906
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| || |||| |||||||||| |||||||||  ||| ||||| |  |||  |||||||||||||||||||||||||||||||    
T  37357043 aaactagttacaaacccgtgctttgcacaggttgaataacgtattttttttaaa-tttagttttgaatgagaaatcttataaattacagaaaattgttgt 37356945  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    | |||||||||||||||||||||| ||||||||||||||    
T  37356944 catttataaatgtgaaaatcaaagctgcgtaaaccaaaa 37356906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 46737040 - 46737199
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||| ||||| | |||  |||||||||||       |||||||||||  ||||||||||||||||||    
T  46737040 actaaaactgtcatttctgtgcgtttctggagttggagataggaagatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 46737138  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  46737139 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 46737199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 52802952 - 52802839
Alignment:
Q  273 cacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaagg 372  Q
    |||||||||||||| |||||||||||||| ||||| || |||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||||      
T  52802952 cacgggttgaataacgtattttttaaaaa-tttagttccgaaggagaaatcttataaattacggaaaattgttgtcctttatcattgtgaaaatcaaaac 52802854  T
Q  373 tgcgtaaaccaaaat 387  Q
    ||||||||| |||||    
T  52802853 tgcgtaaactaaaat 52802839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24851850 - 24852012
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||| |||||| ||||| ||| || ||||||||||||  | |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  24851850 actaaaactttcatttctgtgcgtttctggagttggaaatagaaagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 24851949  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||| || || || || |||||||||||||||||||||  |||||||||||| ||||||||||    
T  24851950 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaagtc 24852012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 270 - 387
Target Start/End: Original strand, 36741820 - 36741936
Alignment:
Q  270 tcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaa 369  Q
    ||||||||||||||| | ||||||||| |||| ||||| |  |||| ||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  36741820 tcgcacgggttgaattacgtatttttttaaaa-tttagtttcgaaggagaaatcttataaattacgaaaaattattgtcctttataaatgtgaaaatcaa 36741918  T
Q  370 aggtgcgtaaaccaaaat 387  Q
    || |||||||||||||||    
T  36741919 agctgcgtaaaccaaaat 36741936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 1397683 - 1397595
Alignment:
Q  75 agtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| ||| ||||||||||||||||||    
T  1397683 agtttaaggacgattttgttcgatttaaaaaagataggaccatttttatgagttggtcaaaatggttggatcaaaagtgtaattaagtc 1397595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 387
Target Start/End: Complemental strand, 20591048 - 20590909
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||| ||| ||| | ||| |||||| |||||||||||  |||||||| |||| ||||| |  |||| |||||||||||||||||| |||||||||||    
T  20591048 aaaactacttacaaacccgtgcttcgcatgggttgaataacatatttttttaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttg 20590950  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||| |||||||||||| ||| |||||||||||    
T  20590949 tcctttataaatatgaaaatcaaagctgcataaaccaaaat 20590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 386
Target Start/End: Original strand, 39404588 - 39404727
Alignment:
Q  246 taaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgtt 345  Q
    |||||||||||| ||| | ||| ||||||||||||||||||  |||||||| |||| ||||| |   |||  ||||||||||||||||| ||||||||||    
T  39404588 taaaactagttacaaacccgtgcttcgcacgggttgaataacatatttttttaaaa-tttagtttcaaaggcgaaatcttataaattacggaaaattgtt 39404686  T
Q  346 gtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    ||| |||||||||||||||||||||| ||||||||| ||||    
T  39404687 gtcatttataaatgtgaaaatcaaagctgcgtaaactaaaa 39404727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 386
Target Start/End: Complemental strand, 29713867 - 29713731
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| || ||||||||||||||| ||||||||| |||| ||||| || |||| |||||||||||||||||  ||||||||||      
T  29713867 aaactagttacaaacccgtgctttgcacgggttgaataacgtatttttttaaaa-tttagttctgaaggagaaatcttataaattatggaaaattgttac 29713769  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  29713768 cctttataaatgtgaaaatcaaa-gttcgtaaaccaaaa 29713731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 312 - 386
Target Start/End: Complemental strand, 50043317 - 50043243
Alignment:
Q  312 gaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  50043317 gaaggagaaatcttataaattacagaaaattgttgtcatttataaatgtgaaaatcaaagctgcgtaaaccaaaa 50043243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 34807524 - 34807682
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| |||||| ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||| ||    
T  34807524 actaaaactgtcatttctatgcgtttatggagttggaaatagggagataggactaaaactgccaaaaa-catatagtttaaggacgattttgttcgaatt 34807622  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||  |  |||||||||||||| |||||||  || |||||||| | |||||||    
T  34807623 aaaaaagatagaataattttcgtgagttgatcaaaataataagaccaaaaatataattaa 34807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 41608870 - 41608959
Alignment:
Q  72 tatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||  ||||||||||| ||||||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41608870 tatagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 41608959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 46106467 - 46106327
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaa---aatttagctcagaagaagaaatcttataaattacagaaaattgt 344  Q
    |||||||||||||  | ||| |||||||||||||||||| |||||||||       |||||||||| |||  |||||||||||||||||| |||||||||    
T  46106467 aaactagttaaaa--ccgtgcttcgcacgggttgaataacgtatttttttttttttaatttagctccgaacgagaaatcttataaattacggaaaattgt 46106370  T
Q  345 tgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||| |||||||||||||||||||| | |||||||||||||||    
T  46106369 tgtcatttataaatgtgaaaatcaaggctgcgtaaaccaaaat 46106327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 33778018 - 33778162
Alignment:
Q  22 catttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataagaccattttc 121  Q
    |||||||| ||||||||||||||| ||||||||||||||||       |||||| ||||   ||||||||||| ||||||||| || ||  | |||||||    
T  33778018 catttatggagttggaaatagggagatagaactaaaactgcaaaaaa-catataatttaggaacgattttgtttgatttaaaagaggtagaatcattttc 33778116  T
Q  122 gtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaa 167  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||    
T  33778117 gtgagttagtcaaaatggtagaacgaaaagtgtaattaagtcaaaa 33778162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 45838705 - 45838549
Alignment:
Q  4 aaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaa 103  Q
    |||||| |||||| ||||| ||| |||||| ||||||||||| |||| |||||||||||       |||||||||||  |||||||||||||||||||||    
T  45838705 aaaactatcatttctgtgcgtttttgaagtaggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaa 45838607  T
Q  104 aaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    | || || ||||| || |||||||||||||||||   |||||||||||||||| ||||    
T  45838606 agaggtaggaccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaaataag 45838549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 35643648 - 35643558
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||| ||||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||| |||||| ||||| |||||    
T  35643648 catatagtttaaggacgattttattcaattttaaaaagataggaccattttcgtgagttggtcaaaatggtaagaccaatagtgtgattaa 35643558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 41608536 - 41608377
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn--catatagtttaaagacgattttgttcgat 98  Q
    |||||||||||||||| ||||| ||| |||||||||||||| ||| |||| |||||||||||         ||||||||||   ||||||||||||||||    
T  41608536 actaaaactgtcatttctgtgcgtttttgaagttggaaatatggagataggactaaaactgcaaaaaaaaacatatagtttg--gacgattttgttcgat 41608439  T
Q  99 ttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||| || || ||||| |||| ||||||| ||||||||  ||||||||||||||||||||    
T  41608438 ttaaaagaggtatgaccaatttcatgagttgatcaaaatgcaaggaccaaaagtgtaattaa 41608377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 53991300 - 53991388
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtg 361  Q
    ||||||||||||||| ||||||||| |||| ||||| || |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  53991300 gcacgggttgaataacgtatttttttaaaa-tttagttctgaaggagaaatcttataaattacggaaaattgttgtcctttataaatgtg 53991388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 13172960 - 13172854
Alignment:
Q  280 tgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaa 379  Q
    ||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| ||||||||||||| ||||||||| |||||||||||  |||||||    
T  13172960 tgaataacgtatttttttaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgtcatttataaatttgaaaatcaaaattgcgtaa 13172862  T
Q  380 accaaaat 387  Q
    ||||||||    
T  13172861 accaaaat 13172854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 16214880 - 16215038
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||| |||||| ||||  ||| || ||||| ||||||| | |||||| |||||||||        ||||||||||| ||||||||| ||| ||||    
T  16214880 actaaaactatcatttatgtgtgtttctggagttgaaaataggaagatagaattaaaactgcaaaaaat-atatagtttaaggacgattttattcaattt 16214978  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| || ||||||||| ||||| |||||||| ||||||||||||| |||||||    
T  16214979 aaaaaagatatgatcattttcgtaagttgatcaaaatgataggaccaaaagtataattaa 16215038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 36168422 - 36168332
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||| ||||| |||||||||||||||||||||| || |||||||| ||||||| |||||||||||||  |||| |||||||||||||||    
T  36168422 catataatttaaggacgattttgttcgatttaaaagaggtaagaccaatttcgtgggttggtcaaaatgcaaggagcaaaagtgtaattaa 36168332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 229322 - 229164
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncat-atagtttaaagacgattttgttcgatt 99  Q
    ||||||||||||| |||||||| |||||| ||||| ||||| ||   |||||||||||||||       ||| ||||||||| ||||||||||||| |||    
T  229322 actaaaactgtcacttttgtgcgtttatggagttgaaaataagggagtagaactaaaactgcaaaaa--catgatagtttaaggacgattttgttcaatt 229225  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    | ||| ||  ||||||||||||| ||| ||||||||||   ||||||||||||||||||||    
T  229224 tgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaa 229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 47555456 - 47555562
Alignment:
Q  279 ttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgta 378  Q
    |||||||| ||||||||| |||| ||||| |  |||  |||||||||||||||||||||||||| | ||| |||||||||||||||||||||  ||||||    
T  47555456 ttgaataacgtatttttttaaaa-tttagtttcgaatgagaaatcttataaattacagaaaattat-gtcatttataaatgtgaaaatcaaaactgcgta 47555553  T
Q  379 aaccaaaat 387  Q
    |||||||||    
T  47555554 aaccaaaat 47555562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 229615 - 229702
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||| |||||||||||| ||||| ||| ||  ||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  229615 atagtttaaggacgattttgtttgatttgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 35193467 - 35193322
Alignment:
Q  2 ctaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattta 101  Q
    ||||||||||||||| | ||| ||| |||||||| ||||||| | |||| |||||||||||       |||||||||||  ||||||||||||||||||     
T  35193467 ctaaaactgtcatttctctgcgtttctgaagttgaaaatagg-agataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttg 35193370  T
Q  102 aaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaa 149  Q
    ||| || || ||||||||||||||| || ||||||||  |||||||||    
T  35193369 aaagaggtaggaccattttcgtgagctgatcaaaatgcgaggaccaaa 35193322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 17504412 - 17504480
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatg 138  Q
    |||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||    
T  17504412 catatagtttaaggacggttttgttcgatttaaaagagataggaccattttcgtgagctgttcaaaatg 17504480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 44219448 - 44219373
Alignment:
Q  90 ttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaa 165  Q
    |||||| |||||||||||| | ||||| |||||||||||||| |||||   |||||||||||||||||||||||||    
T  44219448 ttgttcaatttaaaaaagagaggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaagtcaa 44219373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 23986595 - 23986522
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||| ||| | ||||||||||||||| |||||||||||  ||||||||||||| |||||||    
T  23986595 ttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgaaattaag 23986522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 26974698 - 26974788
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||  ||| |||||||||||||||||| || || ||||| |||||||| ||  ||||||||  |||||||||| |||||||||    
T  26974698 catatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattcaaaatgcaaggaccaaaaatgtaattaa 26974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 337 - 387
Target Start/End: Original strand, 50118154 - 50118204
Alignment:
Q  337 aaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  50118154 aaaattgttgtcctttataaatgtgaaaatgaaagctgcgtaaactaaaat 50118204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 6617116 - 6617205
Alignment:
Q  71 atatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||  ||||||||| |||||||||||| || || ||||| ||||||||||| |||||||||  || | ||||| |||||||||    
T  6617116 atatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtcaaaatgcaagtagcaaaaatgtaattaa 6617205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 10795769 - 10795854
Alignment:
Q  75 agtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||| ||||||||||||||||||| ||| ||| | ||||| ||||||||| || ||||||||   ||| |||||||||||||||    
T  10795769 agtttagagacgattttgttcgatttgaaagagagaggaccaatttcgtgagctgttcaaaatgcggggatcaaaagtgtaattaa 10795854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24851626 - 24851565
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgc 62  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| |||  |||||||||||    
T  24851626 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataagactaaaactgc 24851565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35643728 - 35643667
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgc 62  Q
    |||||||||||||||| ||||| |||||| ||||| ||||||||| |||| |||||||||||    
T  35643728 actaaaactgtcatttctgtgcgtttatggagttgtaaatagggagataggactaaaactgc 35643667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 35644042 - 35644107
Alignment:
Q  97 atttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagt 162  Q
    |||||||| || || ||||  |||||||||||||||||||||  ||||||||||||||||||||||    
T  35644042 atttaaaagaggtatgacctatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagt 35644107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 18965230 - 18965142
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||| |||||||||||||||||| ||| ||  |||||| |||||||||||  || ||||||  |||| ||||| ||||||||||    
T  18965230 atagtttaaggacgattttgttcgatttgaaagaggcaagaccgttttcgtgagtaagttaaaatgtgaggatcaaaaatgtaattaag 18965142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 23992319 - 23992375
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  23992319 aactagttacaaacctgtgtttcgcacgggttgaataacgtatcgtttaaaaaattt 23992375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 30597985 - 30598068
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaa 166  Q
    |||||||||||||||||||||| ||| |  |||| || ||||||||||||||||    ||||||||||||||||| ||| ||||    
T  30597985 gacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaaacacgaggaccaaaagtgtaatcaagccaaa 30598068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 40160556 - 40160646
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaat 173  Q
    |||| |||||||| |||| ||| ||  | ||| |||||||||||||||||||||||  |||||||||| |||||||||  ||||| |||||    
T  40160556 gacggttttgttcaatttgaaagaggcatgactattttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaaccaaaacaaaat 40160646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 12930879 - 12930806
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||||||| ||  ||| |||||||||||||| ||||||   |||||||||||| |||||||    
T  12930879 ttttgttcgatttgaaaaagacaatgccaatttcgtgagttggttaaaatgtgcggaccaaaagtgcaattaag 12930806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 24335836 - 24335763
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  |||| | ||||||||||||||    
T  24335836 ttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggatcgaaagtgtaattaag 24335763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 24336234 - 24336307
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||| ||  | ||||||||||||||| | |||||||||  |||| ||||||||||||||||    
T  24336234 ttttgttcgatttgaaagaggcaggaccattttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaattaag 24336307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 51309976 - 51310049
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||| ||  | ||||||||||||||| |||| ||||||  ||||||||||||| |||||||    
T  51309976 ttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggaccaaaagtgcaattaag 51310049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 40160187 - 40160096
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  |||| ||||||||||||||||| ||  | ||| ||||||||||| |||| ||||||   ||| ||||| ||||||||||    
T  40160187 catatagtttagggacggttttgttcgatttaaaagaggcatgactattttcgtgagctggttaaaatgcggggatcaaaaatgtaattaag 40160096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 51641302 - 51641377
Alignment:
Q  89 tttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtca 164  Q
    |||||| ||||||||||||  | || || ||||||||||| ||| |||||  ||||| ||||||||||||||||||    
T  51641302 tttgtttgatttaaaaaaggcaggatcaatttcgtgagtttgtctaaatgcaaggactaaaagtgtaattaagtca 51641377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 35193768 - 35193846
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| ||||||| ||||| ||| ||  | ||||||||||||||| |  ||||||||  |||||||||||||||||||||    
T  35193768 gacggttttgttagatttgaaagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaag 35193846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 17504025 - 17503976
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||| |||||||||||  |||||||| ||| ||||||||    
T  17504025 gaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaag 17503976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 36678750 - 36678787
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaattta 306  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  36678750 ttcgcacgggttgaattatgtatttttttaaaaattta 36678787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 301
Target Start/End: Complemental strand, 5482947 - 5482915
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaa 301  Q
    ||||||||||||||||||||||||||| |||||    
T  5482947 ttcgcacgggttgaataatgtatttttcaaaaa 5482915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 15650485 - 15650541
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||| || ||||||||||    
T  15650485 aactagttacaaacccgtgcttcgcacgggttgaataacgtatcttgtaaaaaattt 15650541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 19109061 - 19109105
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattt 293  Q
    ||||||||| ||||| |||||||||||||||| ||||| ||||||    
T  19109061 aactagttacaaatccgtgtttcgcacgggttcaataacgtattt 19109105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 51473240 - 51473399
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  51473240 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 51473339  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51473340 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 51473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41998391 - 41998231
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||| | |||||| ||||||||||||||| |||  |||||||||||       |||||||||||| ||||||||||||||||||    
T  41998391 actaaaactgtcatttctgttcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 41998292  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41998291 aaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaag 41998231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 47431858 - 47431698
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || |||| |||||||||| |||| |||||||||||       |||||||||||||||||||||||||||||||    
T  47431858 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgattt 47431759  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47431758 aaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 47431698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 49951707 - 49951549
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||||| |||| ||||| |||||| ||||||||||||||| |||| ||||||| |||       |||||||||||| ||||||||||||||||||    
T  49951707 actaaaactgttatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 49951609  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49951608 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 26100777 - 26100915
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||| |  |||| |||||||||||||||||| |||||||||||||    
T  26100777 aactagttacaaacccgtgcttcgcacgggttgaataatgtattttttaaaaaatttagtttcgaaggagaaatcttataaattacggaaaattgttgtc 26100876  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  26100877 ctttataaatgtgaaaatcaaagttgcgtaaatcaaaat 26100915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 38535470 - 38535311
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| ||| |||||||       |||||||||||| ||||||||||||||||||    
T  38535470 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactgaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 38535372  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38535371 aaaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaag 38535311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 51828925 - 51829095
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| |||| |||||||||||       |||||||||||| |||||||||||| || ||    
T  51828925 actaaaactgtcatttatgtgcgtttatgaagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgtttgaatt 51829023  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaa 172  Q
    |||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||||||||| |||| |||||    
T  51829024 aaaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaagccaaattaaaa 51829095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 51828342 - 51828502
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||| ||||||||||||||    
T  51828342 actaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacaattttgttcgattt 51828441  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  51828442 aaaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaag 51828502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 43678456 - 43678297
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| |||||  || || ||||||||||||||| |||  |||||||||||       |||||||||||| ||||||||||||||||||    
T  43678456 actaaaactgtcatttatgtgcgcttctggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 43678358  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43678357 aaaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 43678297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 44676857 - 44677015
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| |||||| || |||| ||||||| |||       |||||||||||| ||||||||||||||||||    
T  44676857 actaaaactgtcatttatgtgcgtttctggagttgaaaatagagagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgattt 44676955  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44676956 aaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2051460 - 2051297
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn---catatagtttaaagacgattttgttcga 97  Q
    |||||||||||||||||||||| ||| || |||| |||||||||| |||| | |||||||||          ||||||||||||  ||||||||||||||    
T  2051460 actaaaactgtcatttttgtgcgtttctggagttagaaatagggaaataggaataaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcga 2051361  T
Q  98 tttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2051360 tttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 2051297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 55389766 - 55389609
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  55389766 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 55389668  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 159  Q
    ||||||| || ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  55389667 aaaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaatta 55389609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 46013807 - 46013967
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  46013807 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 46013906  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||  |||||||| | ||||||||||||||| ||| ||||||||||||||||||    
T  46013907 aaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaag 46013967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 48519678 - 48519792
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaag 371  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48519678 gcacgggttgaataacgtattttttaaaa-atttagctccgaaggagaaatcttataaattacggaaaattgttgtcctttataaatgtgaaaatcaaag 48519776  T
Q  372 gtgcgtaaaccaaaat 387  Q
     |||||||||||||||    
T  48519777 ttgcgtaaaccaaaat 48519792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 51828701 - 51828541
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  51828701 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttacggacgattttgttcgattt 51828602  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || |||||||| |||||| | ||||||||||||  |||||||||||||||||||||    
T  51828601 aaaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaag 51828541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 50662797 - 50662956
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| |||||||||  ||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  50662797 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagctaggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 50662895  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  50662896 aaaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaag 50662956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 55290396 - 55290533
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| ||||| |||| ||||||||||||| ||||||||||||| ||||||||| ||||  ||||||||||||||||| |||||||||||||    
T  55290396 aactagttacaaacctgtgcttcgtacgggttgaataacgtattttttaaaa-atttagctccgaaggggaaatcttataaattacggaaaattgttgtc 55290494  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||| |||  |||||||||||||||    
T  55290495 ctttataaatgtgaaaataaaatctgcgtaaaccaaaat 55290533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 49720767 - 49720905
Alignment:
Q  22 catttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataagaccattttc 121  Q
    ||||| || ||||||||||||||| |||  |||||||||||       |||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  49720767 catttctggagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttc 49720865  T
Q  122 gtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  49720866 gtgagttggtcaaaatagtaggaccaaaagtgtaattaag 49720905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 32730774 - 32730935
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || |||| |||||||||| |||| | |||||||||       |||||||||||| ||||||||||||| ||||    
T  32730774 actaaaactgtcatttctgtgcgtttctggagtttgaaatagggagataggattaaaactgcaaaaaa-catatagtttaaggacgattttgttcaattt 32730872  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  32730873 aaaaaagataggaccattttcttgagttggttaaaatggtatgaccaaaagtgtaattaagtc 32730935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 14654292 - 14654201
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  14654292 catatagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaag 14654201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16701174 - 16701336
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn--catatagtttaaagacgattttgttcgat 98  Q
    ||||||||||| ||||   ||| |||||| ||||||||||||||| |||  |||||||||||         |||||||||||| |||||||||||||||     
T  16701174 actaaaactgtaatttcgatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgaa 16701273  T
Q  99 ttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16701274 ttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaag 16701336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 30513883 - 30513721
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| ||||||| |||||| ||| |||  |||||||||||       |||||||||||| ||||||||| ||||||||    
T  30513883 actaaaactgtcatttctgtgcgtttctgaagttcgaaatatggagatatgactaaaactgcagaaaaacatatagtttaa-gacgattttattcgattt 30513785  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtca 164  Q
    |||||||||| ||||||||||||||||| |||||||||  |||||||||| |||||||||||||    
T  30513784 aaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaagtca 30513721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 49951931 - 49952102
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||  |||||||||||       ||| |||||||| ||||||||||||||||||    
T  49951931 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catgtagtttaatgacgattttgttcgattt 49952029  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaat 173  Q
    |||| || |||||||| |||||||||||||||||||||  |||||||||| |||||||||| |||||||||||    
T  49952030 aaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagccaaaataaaat 49952102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 40839037 - 40839195
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || |||| |||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  40839037 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 40839135  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || |||||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  40839136 aaaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaa 40839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 247 - 387
Target Start/End: Complemental strand, 8396810 - 8396670
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||||| ||| | ||| |||||||||||||||||| |||||||||||||||||||| || |||| |||||||||||||||||   ||||||| ||    
T  8396810 aaaactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaaatttagttctgaaggagaaatcttataaattatgaaaaattggtg 8396711  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    | ||||||||| |||||||| |||| |||||||||||||||    
T  8396710 ttctttataaacgtgaaaattaaagctgcgtaaaccaaaat 8396670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 40275479 - 40275647
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||| ||| || ||||||||||||||  |||  |||||||||||       ||||||||||| |||||||||||||||||||    
T  40275479 actaaaactgtcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtttagagacgattttgttcgattt 40275577  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaa 171  Q
    |||| || || |||||||| ||||||||||||||||||  ||||||||||||||||||||| |||| ||||    
T  40275578 aaaagaggtaggaccattt-cgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccaaattaaa 40275647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 329986 - 329850
Alignment:
Q  22 catttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataagaccattttc 121  Q
    |||||||| ||||||||| ||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  329986 catttatggagttggaaacagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagttaggaccattttc 329888  T
Q  122 gtgagttggtcaaaatggtaggaccaaaagtgtaatta 159  Q
    |||||||||||||||||| || ||||||||||||||||    
T  329887 gtgagttggtcaaaatggaagaaccaaaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 248 - 387
Target Start/End: Original strand, 19893178 - 19893315
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| |||  |||||||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||| ||||||||||||    
T  19893178 aaactagttacaaacccgtgcttcatacgggttgaataat-tattttttaaaa-atttagctccgaaggagaaatcttataaattacggaaaattgttgt 19893275  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||| || || ||||||||||||    
T  19893276 cctttataaatgtgaaaatcatagttgtgtaaaccaaaat 19893315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 247 - 371
Target Start/End: Original strand, 26776431 - 26776557
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtatttttt--aaaaaatttagctcagaagaagaaatcttataaattacagaaaattgt 344  Q
    ||||||||||| ||| | ||| ||||||||||||||||||  ||||||||  |||||||||| ||| |||| |||||||||||||||||| |||||||||    
T  26776431 aaaactagttacaaacccgtgcttcgcacgggttgaataacatatttttttaaaaaaatttaactccgaaggagaaatcttataaattacggaaaattgt 26776530  T
Q  345 tgtcctttataaatgtgaaaatcaaag 371  Q
    |||||||||||||||||||||||||||    
T  26776531 tgtcctttataaatgtgaaaatcaaag 26776557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 249 - 387
Target Start/End: Complemental strand, 18688716 - 18688579
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| ||||| ||||||||||||| ||| |||| | ||| ||||||||||||  |||||||||||     
T  18688716 aactagttacaaacccgtgcttcgcacgggttgaataacgtattatttaaaaaatttaactccgaaggaaaaa-cttataaattacgaaaaattgttgtt 18688618  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  18688617 ctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 18688579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 4137399 - 4137539
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaa--aaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||||||||     ||||||||||  |||| |||||||||||||||||| |||||||||||    
T  4137399 aactagttacaaacccgtgcttcgcacgggttgaataacgtatttttttttttaaatttagcttcgaaggagaaatcttataaattacggaaaattgttg 4137498  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  4137499 tcctttataaatgtgaaaatcaaatctgcgtaaaccaaaat 4137539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 249 - 386
Target Start/End: Complemental strand, 35861044 - 35860909
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| |||||||||||||    
T  35861044 aactagttacaaacccgtgcttcgcacgggttgaataacgtatttttttaaaa-tttagttatgaaggagaaatcttataaattacggaaaattgttgtc 35860946  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  35860945 ctttataaatgtg-aaatcaaagctgcgtaaaccaaaa 35860909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 250 - 387
Target Start/End: Complemental strand, 52843226 - 52843090
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| |||||||| |||||||||||||||||||||||| ||||| |  |||| ||||||||||||||||||  |||||||| ||||    
T  52843226 actagttacaaacccgtgcttcgcacgagttgaataatgtattttttaaaaa-tttagtttcgaaggagaaatcttataaattacgaaaaattgtcgtcc 52843128  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  52843127 tttataaatatgaaaatcaaagctgcgtaaaccaaaat 52843090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 22370758 - 22370599
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||||| |||| ||||| ||| || ||||||| ||| ||| |||| |||||||||||       |||||||||||  |||||||||||| | |||    
T  22370758 actaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggttt 22370659  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||| || |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  22370658 aaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 361
Target Start/End: Complemental strand, 22477950 - 22477836
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||||| ||| | ||| |||||||||||||||||| |||||||||  ||||||||| || |||| |||||||||||||||||| |||||||||||    
T  22477950 aaaactagttacaaacccgtgcttcgcacgggttgaataacgtattttttttaaaatttagttctgaaggagaaatcttataaattacggaaaattgttg 22477851  T
Q  347 tcctttataaatgtg 361  Q
    |||||||||||||||    
T  22477850 tcctttataaatgtg 22477836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 51828118 - 51827959
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||| ||||||| |||       |||||||||||  ||||||||||||||||||    
T  51828118 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaaatgcaaaaaa-catatagtttagggacgattttgttcgattt 51828020  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  51828019 aaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 51827959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 52237202 - 52237361
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||  | |||| |||||||||| |||| |||||||||||       |||||| ||||  ||||||||||||||||||    
T  52237202 actaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaa-catataatttagggacgattttgttcgattt 52237300  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  52237301 aaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 52237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 52375716 - 52375875
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||  |||  |||||||||||       |||||||||||  ||||||||||||| ||||    
T  52375716 actaaaactgtcatttctgtgcgtttctggagttggaaataggggaatatgactaaaactgcaaaaaa-catatagtttatggacgattttgttcaattt 52375814  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  52375815 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 52375875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 55389982 - 55390141
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||  ||| ||||||||| |       |||||||||||  |||||||||||| |||||    
T  55389982 actaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaactacaaaaaa-catatagtttagtgacgattttgtttgattt 55390080  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||| || |||||||||||||| ||||| ||||||  |||||||||||||||||||||    
T  55390081 aaaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaag 55390141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 330223 - 330380
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    |||||||||||||| ||||| ||| |  ||||||||||||||| |||  |||||||||||       |||||||||||  |||||||||||| |||||||    
T  330223 taaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaa-catatagtttagggacgattttgtttgatttaa 330321  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| || |||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  330322 aaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaag 330380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 52375488 - 52375323
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| ||| || |||| |||||||||| ||||||||||||||||       |||||||||||  ||||||||||||| ||||    
T  52375488 actaaaactgtcatttctatgcgtttctggagttagaaatagggagatagaactaaaactgcaaaaaa-catatagtttagggacgattttgttcaattt 52375390  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaa 167  Q
    |||| || || |||||||||||||| ||||| ||||||  ||||||||||||||||||||| |||||    
T  52375389 aaaagaggtatgaccattttcgtgaattggttaaaatgtgaggaccaaaagtgtaattaagccaaaa 52375323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 25535052 - 25534892
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaag-acgattttgttcgatt 99  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| |||| |||||||||||       |||||| ||||  | ||||||||||||||||    
T  25535052 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catataatttaggggacgattttgttcgatt 25534954  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| || || |||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  25534953 taaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaag 25534892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 19360754 - 19360871
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    |||||| | ||||||||| ||||||||| |||| ||||| |  |||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  19360754 ttcgcatgagttgaataacgtatttttttaaaa-tttagtttcgaagaagaaatcttataaattacaaaaaattgttgtcatttataaatgtggaaatca 19360852  T
Q  369 aaggtgcgtaaaccaaaat 387  Q
    ||| |||||||||||||||    
T  19360853 aagctgcgtaaaccaaaat 19360871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 34104798 - 34104644
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||||||||| ||| || || |||||||||| | |||  |||||||||||       |||||||||||| ||||||||||||| ||||    
T  34104798 actaaaaatgtcatttttgtgcgtttctggagctggaaatagg-agatatgactaaaactgcaaaaaa-catatagtttaatgacgattttgttcaattt 34104701  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 157  Q
    ||||||||||  |||||||||||||||||||||||||||||| || |||||||||||    
T  34104700 aaaaaagatagaaccattttcgtgagttggtcaaaatggtagaacaaaaagtgtaat 34104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 40838813 - 40838655
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||  |||  |||||||||||       |||||||||||  |||||||||||| |||||    
T  40838813 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtttatggacgattttgtttgattt 40838715  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || || |||||||||||||||||||||||||||  |||| |||||||||||||||    
T  40838714 aaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaa 40838655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 40275256 - 40275095
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||| ||| || |||| |||||| ||| |||| |||||||||||        |||| ||||||  ||| |||||||||||||    
T  40275256 actaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttagggacaattttgttcgatt 40275157  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| || || |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  40275156 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 40275095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 387
Target Start/End: Complemental strand, 53802381 - 53802268
Alignment:
Q  275 cgggttgaataatgtatttttt--aaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaagg 372  Q
    |||||||||||| |||||||||  ||||||||||| ||  || ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||     
T  53802381 cgggttgaataacgtatttttttaaaaaaatttagttccaaaaaagaaatattataaat-acggaaaattgttgtcctttataaatgtgaaaatcaaagt 53802283  T
Q  373 tgcgtaaaccaaaat 387  Q
    |||||||||||||||    
T  53802282 tgcgtaaaccaaaat 53802268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 387
Target Start/End: Complemental strand, 22522321 - 22522173
Alignment:
Q  241 tataataaaactagttaaaaatctgtgtttcgcacgggttgaataa--tgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaa 338  Q
    |||| ||| |||||||| ||| | ||| ||||||||||||||||||  | ||| ||||    ||||||  || |||| ||||||||||||||||||||||    
T  22522321 tatattaatactagttacaaacccgtgcttcgcacgggttgaataacatatatattttttttaatttaattccgaaggagaaatcttataaattacagaa 22522222  T
Q  339 aattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  22522221 aattgttgtcctttataaatgtgaaaatcaatgttgcttaaaccaaaat 22522173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 52236977 - 52236815
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||  |||  |||||||||||       |||||||||||  ||||||||||||||||||    
T  52236977 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggggatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 52236879  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtca 164  Q
    |||| || || |||||||||||||| ||| ||||||||  ||||| ||||||||||||||||||    
T  52236878 aaaagaggtatgaccattttcgtgaattgttcaaaatgcgaggactaaaagtgtaattaagtca 52236815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 269 - 361
Target Start/End: Original strand, 11951010 - 11951101
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtg 361  Q
    |||||||||||||||||| ||||||||| |||| ||||| || |||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  11951010 ttcgcacgggttgaataacgtatttttttaaaa-tttagttctgaaggagaaatcttataaattacagaaaattattgtcctttataaatgtg 11951101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 14654576 - 14654733
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||| ||| |||| |||||||||||        | ||||||||  ||||||||||||||||||    
T  14654576 actaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaa---acatagtttacggacgattttgttcgattt 14654672  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || ||   ||| |||||||||||||||||||||  |||||||||||||||||||||    
T  14654673 aaaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 14654733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 46013583 - 46013424
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||| ||||||| ||||| ||| || ||||| ||||||||| |||  |||||||||||       |||||| ||||  ||||||||||||||||||    
T  46013583 actaaaaccgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatactttagggacgattttgttcgattt 46013485  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||||||||||||  |||| ||||||||||||||||    
T  46013484 aaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaag 46013424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 49720532 - 49720373
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || |||| |||||| ||| |||| |||||||||||       | |||| ||||  ||||||||||||||||||    
T  49720532 actaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaa-cgtatactttagggacgattttgttcgattt 49720434  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||||||||||||  |||| ||||||||||||||||    
T  49720433 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaag 49720373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 44676633 - 44676467
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||||| |||| |||||| ||||       |||||||||||  |||| |||||||||||||    
T  44676633 actaaaactgtcatttctgtgcgtttcttgagttggaaatagggagataggactaaagctgcaaaaaa-catatagtttagggacggttttgttcgattt 44676535  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaat 168  Q
    |||| || || || || |||| |||||| |||||||||  ||||||||||||||||||||| ||||||    
T  44676534 aaaagaggtatgatcaatttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagccaaaat 44676467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 34105033 - 34105190
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||| ||| |||||||||||||| ||| || | |||||||||||        |||||||||||  |||||||||||||||||    
T  34105033 actaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 34105132  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 157  Q
    ||||| ||  | |||||  ||||| ||||||||||||||  |||||||||||||||||    
T  34105133 taaaagagggaggaccaacttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 29528774 - 29528888
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaag 371  Q
    ||||| ||||||| | ||||||||| |||| ||||| |  |||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  29528774 gcacgagttgaattacgtatttttttaaaa-tttagtttcgaaggagaaatcttataaaatatggaaaattgttgtcctttataaatgtgaaaatcaaag 29528872  T
Q  372 gtgcgtaaaccaaaat 387  Q
     |||||||| ||||||    
T  29528873 ctgcgtaaatcaaaat 29528888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 39094570 - 39094456
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaag 371  Q
    |||||| |||||||| ||||||||| |||| ||||  |  |||  |||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  39094570 gcacggattgaataacgtatttttttaaaa-tttaattttgaaagagaaatcttataaattacggaaaattattgtcctttataaatgtaaaaatcaaag 39094472  T
Q  372 gtgcgtaaaccaaaat 387  Q
     |||||||||||||||    
T  39094471 ttgcgtaaaccaaaat 39094456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 16689451 - 16689361
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||| ||||  |||||||||||||||||||||| || || ||||| ||||||||||||||||||||| ||||||||||| |||||||||    
T  16689451 catatattttatggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgctaggaccaaaactgtaattaa 16689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 38535680 - 38535839
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||||| |||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||  ||||||||| ||||||||    
T  38535680 actaaaactgtaatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttattcgattt 38535778  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| ||||  ||| | |||||| ||||||||||||||   ||||||||||| ||||||||    
T  38535779 aaaagagatcggactaatttcgtaagttggtcaaaatgcacggaccaaaagtataattaag 38535839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 51473016 - 51472857
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||| |||| |||||||||||       |||||| ||||  ||| |||||||| |||||    
T  51473016 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgc-aaaaaacatatactttagggacaattttgtttgattt 51472918  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||  | |||| ||||||||||||||||  |||||||||||| ||||||||    
T  51472917 aaaagaggtaggaaaaatttcatgagttggtcaaaatgcaaggaccaaaagtataattaag 51472857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 282 - 371
Target Start/End: Original strand, 28979640 - 28979728
Alignment:
Q  282 aataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaag 371  Q
    ||||| |||||||||||||| ||||| |  |||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  28979640 aataacgtattttttaaaaa-tttagtttcgaaggagaaatcttataaattaaggaaaattgttgtcctttataaatgtgaaaatcaaag 28979728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 32730550 - 32730392
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||||| |||  | |||||||||       |||||||||||  ||||||||||||| ||||    
T  32730550 actaaaactgtcatttatgtgcgtttctagagttggaaatagggagatacgattaaaactgcaaaaaa-catatagtttagggacgattttgttcaattt 32730452  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || || ||||| ||||  |||||||||||||||  ||||||||||||||||||||    
T  32730451 aaaagaggtaggaccaatttcaagagttggtcaaaatgcaaggaccaaaagtgtaattaa 32730392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2044432 - 2044273
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||||| |||| ||||| ||| |  ||||||||||||||| |||  ||||||||| |       |||||| ||||  ||||||||||||||||||    
T  2044432 actaaaactgttatttatgtgcgtttcttgagttggaaatagggagatatgactaaaact-ccaaaaaacatataatttatggacgattttgttcgattt 2044334  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || |||||||||| ||||||||||||||||  || |||||||||| |||||||    
T  2044333 aaaagaggtatgaccattttcatgagttggtcaaaatgcgagaaccaaaagtgaaattaag 2044273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 387
Target Start/End: Original strand, 40817219 - 40817314
Alignment:
Q  292 tttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||| ||||||||||||| |||   ||||||||| |||||||  |||||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  40817219 ttttttaaaaatttagctctgaaagggaaatcttacaaattacgaaaaattattgttctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 40817314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 36701552 - 36701642
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    ||||||||  || ||||||||||||||| ||| ||| | ||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  36701552 atagtttagggatgattttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagtc 36701642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 41998694 - 41998772
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||| || || ||||| |||||| ||||||||||||||  |||||||||||||||||||||    
T  41998694 gacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaag 41998772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 43678669 - 43678828
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||| | |||  ||| |||||||       |||||||||||  ||||||||||||||||||    
T  43678669 actaaaactgtcatttatgtgcgtttctagagttggaaataggaagatatgactgaaactgcaaaaaa-catatagtttatggacgattttgttcgattt 43678767  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || |  |||||  ||||||||||| ||||||||  |||||||||||||||||||||    
T  43678768 aaaagaggttggaccaagttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaag 43678828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 39010482 - 39010554
Alignment:
Q  78 ttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaa 150  Q
    |||| |||||||||||||||||||||||||||| || |||||||||||| |||||||||||| |||| |||||    
T  39010482 ttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagctggtcaaaatggcaggatcaaaa 39010554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 43222483 - 43222386
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaa 167  Q
    |||||||||||  |||||||||||||||||||||| ||| |  || |||||||||||||||||||||||  | ||||||||  ||||||||| |||||    
T  43222483 catatagtttagggacgattttgttcgatttaaaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaacgtaattaagccaaaa 43222386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 36701196 - 36701108
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||||||||||||||||| ||| ||  | || ||||||||||||||| ||||||||  |||||||||||||||||||||    
T  36701196 atagtttatggacgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaag 36701108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 27199795 - 27199705
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||  |||| ||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  |||||||||| |||||||||    
T  27199795 catatagtttagtgacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaa 27199705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 39010235 - 39010077
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||| |||||| ||||| |||||| ||||| ||||||||| ||   |||||||||||       |||| |||||||  || ||||||||||||||    
T  39010235 actaaaactatcatttatgtgc-tttatggagttgaaaatagggagatgtgactaaaactgcaaaaaa-catacagtttaagaacaattttgttcgattt 39010138  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || || || ||| |||||||||||||||||  |||||||||| ||||||||||    
T  39010137 aaaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaag 39010077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 33412609 - 33412698
Alignment:
Q  72 tatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||  |||||||||||||||||  ||| ||| |  |||||||||||||| || ||||||||  |||||||||||||||||||||    
T  33412609 tatagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaag 33412698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 49407889 - 49407784
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaata 169  Q
    |||| ||||||  |||| |||||||| |||| ||| ||  | ||||||||||||||| |||||||||||  ||||||||||||||||||||| | |||||    
T  49407889 cataaagtttagggacggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcctaaata 49407790  T
Q  170 aaatag 175  Q
    | ||||    
T  49407789 atatag 49407784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 43222774 - 43222934
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaa-tagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||||||||| ||| || ||||| ||| |||||   | | |||||||||||       |||| ||||||  |||||||||||||||||    
T  43222774 actaaaactgtcatttttgtgcgtttctggagttgaaaaataggggg-tgggactaaaactgcaaaaaaacataaagtttagggacgattttgttcgatt 43222872  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| ||  | ||||||||||||| | | |||||||||  |||||||||||||| ||||||    
T  43222873 taaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaagtgtgattaag 43222934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 49408252 - 49408325
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||| ||| |  |||||||||||||| |||||||||||  || ||||||||||||||||||    
T  49408252 ttttgttcgatttgaaagagacacaaccattttcgtgagatggtcaaaatgcgagtaccaaaagtgtaattaag 49408325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 27200187 - 27200235
Alignment:
Q  113 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||    
T  27200187 accattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaag 27200235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 55192211 - 55192115
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaa 166  Q
    |||||||||||  |||| ||||||| ||||| ||| ||   |||||||||||||||| |||||||||||   |||| ||||||||||||||| ||||    
T  55192211 catatagtttatggacggttttgtttgatttgaaagaggcgagaccattttcgtgagctggtcaaaatgcggggactaaaagtgtaattaagccaaa 55192115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 37075779 - 37075688
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  ||||  |||||| ||||| ||| ||  | |||||||||||||||||||||||||||    |||||||||||||||||||    
T  37075779 catatagtttagggacgggtttgtttgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaag 37075688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 50900980 - 50901071
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  |||| |||||||||||||  || ||  | | ||||||| ||||| |||||||||||  |||||||||||||||||||||    
T  50900980 catatagtttagggacggttttgttcgatttgtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 50901071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 37076140 - 37076218
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||| ||| ||    ||||||||||||||| || ||||||||  |||||||||| ||||||||||    
T  37076140 gacgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaag 37076218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 363
Target Start/End: Original strand, 42614373 - 42614457
Alignment:
Q  277 ggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaa 363  Q
    ||||||||||||||||||| ||||| ||| |||  |||| |||||| ||  ||||||||| |||||||||||||| |||||||||||    
T  42614373 ggttgaataatgtatttttcaaaaa-tttggctgtgaagcagaaatgttc-aaattacagtaaattgttgtccttcataaatgtgaa 42614457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 17228624 - 17228576
Alignment:
Q  254 gttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    |||| ||||| |||||||||||||||||||||| ||||||| |||||||    
T  17228624 gttacaaatccgtgtttcgcacgggttgaataacgtattttataaaaaa 17228576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 50900612 - 50900534
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| ||||||||||||| ||| || || ||||||||||||||| || |||||||   | |||||||||| ||||||||    
T  50900612 gacggttttgttcgatttgaaagagttaggaccattttcgtgagctgatcaaaatttgaagaccaaaagtttaattaag 50900534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 8873770 - 8873694
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| ||||||||||||||||| ||| | |||||||||||| |  || ||||||||  |||||||||| |||||||||    
T  8873770 gacggttttgttcgatttaaaagagacatgaccattttcgtaaactgatcaaaatgcgaggaccaaaa-tgtaattaa 8873694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 19353839 - 19353794
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtatt 292  Q
    ||||||||||| ||||||||| |||||||||||| ||||| |||||    
T  19353839 aaaactagttacaaatctgtgcttcgcacgggttcaataacgtatt 19353794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 41053847 - 41053790
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    |||||||||| ||| | ||| |||||||||||||||| |  |||||||||||||||||    
T  41053847 aaactagttacaaacccgtgcttcgcacgggttgaattacatattttttaaaaaattt 41053790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 12141147 - 12141235
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||| ||| | ||||||||||||| ||| || || |||||||| |||||  || | ||||||  |||| ||||||||||||||||    
T  12141147 atagtttagagatggttttgttcgatttgaaagaggtaggaccatttacgtgatctgataaaaatgcgaggaacaaaagtgtaattaag 12141235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 52462214 - 52462270
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    ||||||||| ||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  52462214 aactagttacaaatccgtgcttcgcacgggttcaataacgtatttgataaaaaattt 52462270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 9181693 - 9181534
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||        ||||||||||| ||||||||||||||||||    
T  9181693 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaa-atatagtttaaggacgattttgttcgattt 9181595  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9181594 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 9181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 48247976 - 48248136
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| || | |||||||||||       |||||||||||| ||||||||||||||||||    
T  48247976 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 48248075  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  48248076 aaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 48248136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 25637583 - 25637741
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||  ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  25637583 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 25637681  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637682 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 252 - 387
Target Start/End: Complemental strand, 9151458 - 9151324
Alignment:
Q  252 tagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctt 351  Q
    |||||| ||| | ||| |||||||||||||||||| |||||||||||||| |||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  9151458 tagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttagctccgaaggagaaatcttataaattacggaaaattgttgtcctt 9151360  T
Q  352 tataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||| |||||||||||||||    
T  9151359 tataaatgtgaaaatcaaagctgcgtaaaccaaaat 9151324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 15712526 - 15712367
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||||| |||| ||||||||| |        ||||||||||| ||||||||||||||||||    
T  15712526 actaaaactgtcatttatgtgcgtttctagagttggaaatagggagataggactaaaactacaaaaaat-atatagtttaaggacgattttgttcgattt 15712428  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15712427 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 15712367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 39647981 - 39648118
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  39647981 aactagttacaaacccgtgcttcgcacgggttgaataacgtatttt-taaaaaatttaactccgaagaagaaatcttataaattacggaaaattgttgtc 39648079  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  39648080 ctttatcaatgtgaaaatcaaagctgcgtaaaccaaaat 39648118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 786944 - 786784
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||||||| || ||||| |||||| ||||||||||||||| |||| |||||||||||       |||||||||||| ||  ||||||||||||||    
T  786944 actaaaactgtcacttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggaaaattttgttcgattt 786845  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||| || |||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  786844 aaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaag 786784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 39278281 - 39278143
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||||||||||||||||||  |||||||||||    
T  39278281 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttagctccgaaggagaaatcttataaattacgaaaaattgttgt 39278183  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
     ||||||||||||||||||||||| |||||||||||||||    
T  39278182 tctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 39278143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 7732884 - 7733031
Alignment:
Q  13 atttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataag 112  Q
    |||| |||||||||||| ||||| ||||||||| |||| ||||||| |||       |||||||||||| |||||||||||||||||||||||||||| |    
T  7732884 atttctgtgcatttatggagttgaaaatagggagataggactaaaattgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagatagg 7732982  T
Q  113 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||    
T  7732983 atcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 7733031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 31896813 - 31896950
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||||||||||||| ||||| || |||| |||||||||||||||||| |||||||||||||    
T  31896813 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttagttccgaaggagaaatcttataaattacggaaaattgttgtc 31896911  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||| |||||||||||||||  |||||||||||||||    
T  31896912 ctttatcaatgtgaaaatcaaaactgcgtaaaccaaaat 31896950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 5745800 - 5745642
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||| ||||||||||| |||  |||||||||||       ||||||||||||  | |||||||||||||||    
T  5745800 actaaaactgtcatttatgtgcgtttctggagtaggaaatagggagataagactaaaactgcaaaaaa-catatagtttaagaaagattttgttcgattt 5745702  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5745701 aaaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 5745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 16917806 - 16917715
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16917806 catatagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 16917715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 248 - 387
Target Start/End: Original strand, 21669230 - 21669368
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| |||||||||||||||||| ||||||||||||| |||||||||  ||| ||||||||||||||||||  |||||||||||    
T  21669230 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaa-atttagctccaaaggagaaatcttataaattacgaaaaattgttgt 21669328  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
     ||||||||||||||||||||||| ||| |||||||||||    
T  21669329 tctttataaatgtgaaaatcaaagctgcataaaccaaaat 21669368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 14311672 - 14311830
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| ||||| ||| |  ||||||||||||||| |||  |||||||||||       |||||||||||||||||||||||||||||||    
T  14311672 actaaaattgtcatttctgtgcgtttctagagttggaaatagggagataagactaaaactgcaaaaaa-catatagtttaaagacgattttgttcgattt 14311770  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| ||||||||| |||||||||||||| ||||| ||| ||||||||||||||    
T  14311771 aaaaaagataggaccatttttgtgagttggtcaaattggtacgacaaaaagtgtaattaa 14311830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 39388651 - 39388812
Alignment:
Q  1 actaaaactgtcattttt-gtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||||| |||| ||| || ||||| ||||||||| |||| |||||||||||       ||||||||||| ||||||||||||||||||    
T  39388651 actaaaactgtcattttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaaaacatatagtttagagacgattttgttcgatt 39388750  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| || || ||| | |||||||||||||||||||||  |||||||||||||||||||||    
T  39388751 taaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 39388812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 691332 - 691193
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| |||||||||||||||||| ||||||||| |||||||||| || |||| ||||||||||||||||| | ||||||| |||    
T  691332 aaactagttacaaacccgtgcttcgcacgggttgaataacgtatttttttaaaaatttagttctgaaggagaaatcttataaattataaaaaattggtgt 691233  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
     ||||||||| |||||||| |||| |||||||||||||||    
T  691232 tctttataaacgtgaaaattaaagctgcgtaaaccaaaat 691193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 11971427 - 11971336
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  11971427 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaag 11971336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 7732649 - 7732490
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||| ||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  7732649 actaaaactgtcatttatgtgcgtttatggagttgaaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 7732551  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||| ||||||||  |||||||||| ||||||||||    
T  7732550 aaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaag 7732490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 16081460 - 16081301
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||  ||| || ||||||||||||| | |||| |||||||||||       || ||||||||| ||||||||||||||||||    
T  16081460 actaaaactgtcatttctgtgtgtttttggagttggaaataggtagataggactaaaactgcaaaaaa-caaatagtttaaggacgattttgttcgattt 16081362  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| |||||||| | ||||||||||||||| | |||||||||||||||||||||    
T  16081361 aaaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaag 16081301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 28687750 - 28687584
Alignment:
Q  5 aaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaa 104  Q
    |||||||||||| ||||| ||| || ||||||||||||| | |||| |||| ||||||        ||||||||||| ||||||||||||||||||| ||    
T  28687750 aaactgtcatttatgtgcgtttctggagttggaaataggaagataggactagaactgcaaaaaaa-atatagtttaaggacgattttgttcgatttataa 28687652  T
Q  105 aagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaa 172  Q
    ||||||  |||||||||||||||||||||||||| || ||||||||||||||||||| ||||| ||||    
T  28687651 aagatagaaccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaagccaaaaaaaaa 28687584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 26026703 - 26026861
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| ||| || ||||||||||||||| ||| ||||||||||||       |||||||||||| || | |||||||||||||    
T  26026703 actaaaactgtcatttctatgcgtttttggagttggaaatagggagataaaactaaaactgcaaaaaa-catatagtttaaggatggttttgttcgattt 26026801  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    | |||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||    
T  26026802 ataaaagataggaccattttcgtgaatttgtcaaaatagtaggaccaaaagtgtaattaa 26026861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 250 - 387
Target Start/End: Complemental strand, 44806619 - 44806483
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||||| ||| ||||||| |||||||| | ||||||||| |||| ||||| |  |||  |||||||||||||||||| ||||||||||||||    
T  44806619 actagttacaaatccgtgcttcgcactggttgaattacgtatttttttaaaa-tttagtttcgaatgagaaatcttataaattacggaaaattgttgtcc 44806521  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||| |||||||||||||||    
T  44806520 tttataaatgtgaaaatcaaagctgcgtaaaccaaaat 44806483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 27245589 - 27245749
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||| | |||| ||||| ||| || ||||||||||||||| |||  ||||||| |||       |||||| ||||| ||||||||||||||||||    
T  27245589 actaaaactatgatttctgtgcgtttctggagttggaaatagggagatatgactaaaattgcaaaata-catataatttaaggacgattttgttcgattt 27245687  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagt 162  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  27245688 aaaaaagataggaccattttcgtgagttgatcaaaatggtaagaccaaaagtataattaagt 27245749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16081684 - 16081843
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||  || |||||||||||||||    
T  16081684 actaaaactgtcatttttgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggatgattttgttcgattt 16081782  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || || || |||||||||||||||||||||  ||||||||| |||||||||||    
T  16081783 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaag 16081843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 48527431 - 48527548
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    |||||||||||||||||| |||||||||||||  |||||||  |||| ||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  48527431 ttcgcacgggttgaataacgtattttttaaaat-tttagctatgaaggagaaatcttataaattacgaaaaattgttgtcctttatcaatgtgaaaatca 48527529  T
Q  369 aaggtgcgtaaaccaaaat 387  Q
    ||  |||||||||||||||    
T  48527530 aaactgcgtaaaccaaaat 48527548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 25637357 - 25637199
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    |||||||||||||| ||||| ||| || ||||||||||||||| |||| ||||||||| |       |||||||||||  ||||||||||||||||||||    
T  25637357 taaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactacaaaaaaacatatagtttagggacgattttgttcgatttaa 25637258  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    || || || ||||| |||| |||||||||||| |||  |||||||||||||||||||||    
T  25637257 aagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaag 25637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 27245365 - 27245199
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||| |||||| ||||| ||| || ||||||||||| ||| |||| |||||||||||       ||||| ||||   ||||||||||||||||||    
T  27245365 actaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaacatatggtttggggacgattttgttcgattt 27245266  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaa 167  Q
    |||| || || ||||| |||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  27245265 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaaa 27245199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 35155518 - 35155625
Alignment:
Q  279 ttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgta 378  Q
    |||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  35155518 ttgaataacgtatttttttaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgtcctttataaatgtgaaaatcaaagctgcgta 35155616  T
Q  379 aaccaaaat 387  Q
    |||||||||    
T  35155617 aaccaaaat 35155625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 35161189 - 35161342
Alignment:
Q  4 aaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaa 103  Q
    |||||| |||||| ||||| |||||| ||||||||||||||| |||  |||||||||||       |||||||||||  |||||||||||||||||||||    
T  35161189 aaaactatcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaa 35161288  T
Q  104 aaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 157  Q
    | || || ||||| || ||||||||||||||||||  |||||||||||||||||    
T  35161289 agaggtaggaccaattccgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 26026479 - 26026320
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||  |||||||||||       |||||||||||  ||||||||||||||||||    
T  26026479 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataagactaaaactgcaaaaaaacatatagtttatggacgattttgttcgattt 26026380  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || || ||||| ||||||||| ||||||||||   ||||||||||||||||||||    
T  26026379 aaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 26048332 - 26048490
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||||||| || ||||||||||||||| |||  |||||||||||       |||||||||||| ||| |||||||| |||||    
T  26048332 actaaaactgtcatttatgtgcatttttggagttggaaatagggagatatgactaaaactgcaaaaa--catatagtttaaggacaattttgtttgattt 26048429  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| ||||||||||||||||||| |  |||| ||||||||||||||||    
T  26048430 aaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaag 26048490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 27732952 - 27733090
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| ||||||| |||||||||| ||||||||| ||||||||||||  | |   ||||| ||||||||||| |||||||||||||    
T  27732952 aactagttacaaacccgtgcttcgcactggttgaataacgtatttttttaaaaatttagcttcggatgggaaattttataaattacggaaaattgttgtc 27733051  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
     ||||||||||||||||| |||| |||||||||||||||    
T  27733052 ttttataaatgtgaaaataaaagttgcgtaaaccaaaat 27733090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 387
Target Start/End: Complemental strand, 17172935 - 17172799
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| ||||||||| |||||||| |||||||||||||| ||||| || |||  |||||||||||||||||  ||||||||||||||    
T  17172935 actagttacaaacccgtgcttcgcacggattgaataacgtattttttaaaaa-tttagttccgaatgagaaatcttataaattatggaaaattgttgtcc 17172837  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||| |||||||||||||||  ||||||||| |||||    
T  17172836 tttatcaatgtgaaaatcaaaactgcgtaaactaaaat 17172799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 24929688 - 24929859
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatata----gtttaaagacgattttgttcg 96  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||        |||||    |||||  |||||||||||| |    
T  24929688 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaaaatatatatagtttagggacgattttgtttg 24929787  T
Q  97 atttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaat 168  Q
    |||||||| || |||||||| |||||||||||||||||||||  |||||||||| |||||||||| ||||||    
T  24929788 atttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagccaaaat 24929859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 371
Target Start/End: Original strand, 7854985 - 7855087
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    |||||||||||||||||| |||||||||  ||||||||| |  |||| ||||||||||||||||||  |||||||||||||||||||||||||||||| |    
T  7854985 ttcgcacgggttgaataacgtattttttttaaaatttagtttcgaaggagaaatcttataaattacgaaaaattgttgtcctttataaatgtgaaaatta 7855084  T
Q  369 aag 371  Q
    |||    
T  7855085 aag 7855087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 9181794 - 9181956
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn--catatagtttaaagacgattttgttcgat 98  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| |||| ||||||||||          |||||||||||  ||||||||||||||||    
T  9181794 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaaaaacatatagtttagggacgattttgttcgat 9181893  T
Q  99 ttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| || || || || |||||||| ||||||||||||  |||| ||||||||||||||||    
T  9181894 ttaaaagaggtatgatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaag 9181956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 26048050 - 26047960
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  26048050 catatagtttaaggacaattttattcgatttaaaaaagatatgaccattttcgtgagttggtcgaaatggtagaatcaaaagtgtaattaa 26047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 386
Target Start/End: Original strand, 24682277 - 24682413
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| || ||||||||||||||| |||||||||  ||| ||||| |  |||| |||||| |||||||||||||||||||||||||    
T  24682277 aactagttacaaacccgtgctttgcacgggttgaataacgtattttttttaaa-tttagttttgaaggagaaattttataaattacagaaaattgttgtc 24682375  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
     |||||||||||||||||||||  ||||||| ||||||    
T  24682376 atttataaatgtgaaaatcaaaactgcgtaagccaaaa 24682413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 382
Target Start/End: Complemental strand, 29469260 - 29469128
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| || ||||||||||||||| ||||||||| |||| ||||| || |||| |||||||||||||||||| ||||||||||  |    
T  29469260 aactagttataaacccgtgctttgcacgggttgaataacgtatttttttaaaa-tttagttctgaagtagaaatcttataaattacggaaaattgttacc 29469162  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaacc 382  Q
    |||||||||| |||||||||||| || |||||||    
T  29469161 ctttataaatatgaaaatcaaagttgtgtaaacc 29469128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 5334273 - 5334365
Alignment:
Q  71 atatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    ||||||||||  |||||||||||||||||||||| || || ||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  5334273 atatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagtc 5334365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 5333973 - 5333882
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  |||||||||||||||||||||| || || |||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  5333973 catatagtttagggacgattttgttcgatttaaaagaggtacgaccattttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaag 5333882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 312 - 387
Target Start/End: Original strand, 11835021 - 11835096
Alignment:
Q  312 gaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  11835021 gaaggagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaatgttgcttaaaccaaaat 11835096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 312 - 387
Target Start/End: Original strand, 21598014 - 21598089
Alignment:
Q  312 gaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  21598014 gaaggagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaatgttgcttaaaccaaaat 21598089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 249 - 371
Target Start/End: Original strand, 49144032 - 49144155
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaa-aaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    ||||||||| ||||| ||| || ||||| |||||||||||||||||||    |||||||| || |||| ||||||||| |||||||| ||||||||||||    
T  49144032 aactagttacaaatccgtgctttgcacgagttgaataatgtattttttttttaaatttagttctgaaggagaaatcttttaaattacggaaaattgttgt 49144131  T
Q  348 cctttataaatgtgaaaatcaaag 371  Q
    ||||||||||||||| ||||||||    
T  49144132 cctttataaatgtgataatcaaag 49144155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 317 - 387
Target Start/End: Complemental strand, 34873795 - 34873725
Alignment:
Q  317 agaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  34873795 agaaatcttataaattacggaaaattgttgtcctttataaatatgaaaatcaaagctgcgtaaaccaaaat 34873725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 28687884 - 28688041
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||| | |||| ||||||| |||       |||||||||||  ||||||||||||||||||    
T  28687884 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaagtgcaaaaaa-catatagtttagggacgattttgttcgattt 28687982  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || || || || |||||||||||||||||||||  |||||||||| |||||||||    
T  28687983 aaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaa-tgtaattaa 28688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 33636924 - 33637012
Alignment:
Q  299 aaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||| ||| |||| | | |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  33636924 aaaatttaactccgaaggaaagatcttataaattacggaaaattgttgtcctttataaatgtgaaaattaaagttgcgtaaaccaaaat 33637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 3795731 - 3795643
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtg 361  Q
    ||||||||||||||| ||||||||| |||| ||||| || |||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  3795731 gcacgggttgaataacgtatttttttaaaa-tttagttctgaaggagaaatcttataaattacgaaaaattgttgtcctttataaatgtg 3795643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 11973787 - 11973945
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |||||||||||||||| | ||||||||||||||||       ||| || ||||  ||||||||||||| ||||    
T  11973787 actaaaactgtcatttctgtgcgtttctgaagttggaaataggaagatagaactaaaactgc-aaaaaccatttaatttagggacgattttgttcaattt 11973885  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || ||  |||| ||||||  |||||||||||||  |||||||||| |||||||||    
T  11973886 aaaagaggtagaaccaatttcgtacgttggtcaaaatgcaaggaccaaaaatgtaattaa 11973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 5746024 - 5746184
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||| |||  ||||||| |||        |||||||||||  |||| ||||||||||||    
T  5746024 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagataagactaaaattgcaaaaaaaacatatagtttatggacggttttgttcgatt 5746123  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| ||  | || || ||||||||||| |||||||||  |||||||||||||||||||||    
T  5746124 taaaagaggca-gatcaatttcgtgagttagtcaaaatgcaaggaccaaaagtgtaattaag 5746184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 34595228 - 34595316
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||||||||||||||||||||| |   | |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34595228 atagtttagggacgattttgttcgatttaaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 34595316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 48247752 - 48247589
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnnca---tatagtttaaagacgattttgttcga 97  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||  |||||||||||        |   |||| ||||  |||||||||||| ||    
T  48247752 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaaaaatatatactttagggacgattttgtttga 48247653  T
Q  98 tttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||| || || ||||| |||||||||||| ||||||||  |||||||||||||||||||||    
T  48247652 tttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaag 48247589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 787242 - 787329
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||  |||||||||||||||||||||| || || ||||||||||||||||||||||||||   || |||||||||||||||||    
T  787242 atagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaa 787329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 2758151 - 2758242
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  |||||||||||||||||||||| || ||  |||||||||||||||||  |||||||  |||||||||||||||||||||    
T  2758151 catatagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaag 2758242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 35160734 - 35160660
Alignment:
Q  84 acgattttgttcgatttaaaaaaga--taagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 156  Q
    ||||||| ||||||||||||||| |  || |||||||||||||||||||||||||||||||||||||||||||||    
T  35160734 acgatttagttcgatttaaaaaaaaaatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 35160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 9394117 - 9394273
Alignment:
Q  2 ctaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattta 101  Q
    ||||||||||||||| | ||  ||| |||||||||||||||| | |||| |||||||||||        ||||||||||  |||| |||||||||||||     
T  9394117 ctaaaactgtcatttctttgtgtttttgaagttggaaatagg-agataggactaaaactgcaaaaaat-atatagtttagggacggttttgttcgatttg 9394214  T
Q  102 aaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| || ||||||||| ||||| |||||||||||  | |||||||||||||||||||    
T  9394215 aaaaaggtaggaccatttttgtgagctggtcaaaatgcga-gaccaaaagtgtaattaag 9394273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 4850421 - 4850353
Alignment:
Q  319 aaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||  ||||||||||||  ||||||||| |||||||||||| |||||||||||||||    
T  4850421 aaatcttataaattatggaaaattgttgttttttataaatatgaaaatcaaagctgcgtaaaccaaaat 4850353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 14311477 - 14311306
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||  |||||| ||||||||||||||| |||| | ||||||||        |||||||||||  ||||||||| ||| ||||    
T  14311477 actaaaactgtcatttatgtgtgtttatggagttggaaatagggagataggattaaaactgtaaaaaaacatatagtttagggacgattttattcaattt 14311378  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaa 172  Q
    |||| || ||  |||| |||  ||||||||| ||||||  || ||||||| | |||||||||| ||| ||||    
T  14311377 aaaagaggtataaccaattttatgagttggttaaaatgcaagtaccaaaaatataattaagtctaaagaaaa 14311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 39136776 - 39136688
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||||||||||||||||| ||| ||  |  |||||||||||||| |||||||||||  |||| ||||||||||||||||    
T  39136776 atagtttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaag 39136688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 39136999 - 39137077
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||||||| ||  | |||||||||||||||  |||||||||   |||| ||||||||||||||||    
T  39136999 gacgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaag 39137077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 40669689 - 40669751
Alignment:
Q  98 tttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||  || || ||||||||||||||||||||||||| |||| |||||||||||||||    
T  40669689 tttaaaaaaagtatgatcattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 40669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 9393816 - 9393736
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||| ||||||||||||| ||| ||  ||||| ||||||||||| || ||||||||  |||| ||||||||||||||||||    
T  9393816 gacggttttgttcgatttgaaagaggcaagacaattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaagtc 9393736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 49064124 - 49064036
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  || |||||||||| |||| ||| ||  || |||||||||||||| ||||||||||   |||||||||||||||||||||    
T  49064124 atagtttatggaagattttgttctatttgaaagaggcaataccattttcgtgagctggtcaaaatacgaggaccaaaagtgtaattaag 49064036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 34594630 - 34594583
Alignment:
Q  116 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    ||||||||||||| |||||||||  |||||||||||||||||||||||    
T  34594630 attttcgtgagttagtcaaaatgcgaggaccaaaagtgtaattaagtc 34594583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 4477792 - 4477704
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  ||||||||| ||| |||||||| ||    |||||||||||||| ||||||||||||  |||| ||| ||||||||||||    
T  4477792 atagtttagggacgattttattcaatttaaaagaggcgggaccattttcgtgaattggtcaaaatgtaaggatcaatagtgtaattaag 4477704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 49064176 - 49064264
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||||||||||||||||| ||| ||  | ||||||||||||||  ||| |||||||  |||| ||||||| ||||||||    
T  49064176 atagtttattgacgattttgttcgatttgaaagagtcatgaccattttcgtgaactggccaaaatgtgaggatcaaaagtataattaag 49064264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 2067846 - 2067901
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    ||||||||||| ||||| ||| ||||||||| ||||||||||||| || |||||||    
T  2067846 aaaactagttacaaatccgtgcttcgcacggattgaataatgtatcttataaaaaa 2067901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 45815431 - 45815346
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||| ||||||||||||| ||| ||  | ||||||||||   || |||||||||||  |||||||||||||||||||||    
T  45815431 atagtttagggacggttttgttcgatttgaaagaggcatgaccattttc---agctggtcaaaatgcaaggaccaaaagtgtaattaag 45815346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26048109 - 26048060
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatag 50  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| ||||    
T  26048109 actaaaactgtcatttctgtgcgtttctggagttggaaatagggacatag 26048060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 35578979 - 35578902
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| ||||||||||||| |||  |  | ||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  35578979 gacggttttgttcgatttgaaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaagtgtaattaa 35578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 5184479 - 5184431
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||| ||||||||||||||||||||   |||||||||| |||||||||    
T  5184479 gaccaatttcgtgagttggtcaaaatccaaggaccaaaaatgtaattaa 5184431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 5445204 - 5445132
Alignment:
Q  89 tttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||| |||| ||||||  ||||||| ||| |||||||||||||||||  | ||||||| ||| |||||||    
T  5445204 tttgttcaatttgaaaaaggcaagaccagttttgtgagttggtcaaaatgcgatgaccaaaggtgcaattaag 5445132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 5454248 - 5454176
Alignment:
Q  89 tttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||| |||| ||||||  ||||||| ||| |||||||||||||||||  | ||||||| ||| |||||||    
T  5454248 tttgttcaatttgaaaaaggcaagaccagttttgtgagttggtcaaaatgcgatgaccaaaggtgcaattaag 5454176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 32427350 - 32427310
Alignment:
Q  2 ctaaaactgtcatttttgtgcatttatgaagttggaaatag 42  Q
    |||||||||||| |||| |||||||||||||||| ||||||    
T  32427350 ctaaaactgtcacttttttgcatttatgaagttgaaaatag 32427310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 37505229 - 37505069
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||| ||||| || ||||| ||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  37505229 actaaaactgtcatttctgttcatttttggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 37505130  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37505129 aaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 37505069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 34555765 - 34555928
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||  |||||||||||        |||||||||||| |||||||||||||||||    
T  34555765 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgattttgttcgatt 34555864  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34555865 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaagtc 34555928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 21938724 - 21938566
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  21938724 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttatggacgattttgttcgattt 21938626  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21938625 aaaaaagataagatcattttcgtgagttgatcaaaatggtaagaccaaaagtgtaattaa 21938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 9992316 - 9992156
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||  ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||| ||||||||||||||    
T  9992316 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggaccattttgttcgattt 9992218  T
Q  101 aaaaaagataagaccattttcgtgagttggtc-aaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  9992217 aaaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaag 9992156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 10278935 - 10279091
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||  ||| || ||||||| ||| ||| |||| ||||||||||        |||||||||||| ||||||||||||||||||    
T  10278935 actaaaactgtcatttctgtgtgtttctggagttggatatatggagataggactaaaactg----aaaacatatagtttaaggacgattttgttcgattt 10279030  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  10279031 aaaaaagataggaccattttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaag 10279091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 44582442 - 44582607
Alignment:
Q  1 actaaaactgtcatttttgtgcatttat-gaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||| ||| | | || || ||||||||| | |  |||||||||||       ||||||||||||||||||||||||||||||    
T  44582442 actaaaactgtcatttctgtgcgttttttggagctgaaaatagggagacaagactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgatt 44582541  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaa 165  Q
    | |||| |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  44582542 tgaaaatgatatgaccattttcgtgagttgatcaaaatggtagaaccaaaagtgtaattaagtcaa 44582607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 4894011 - 4893873
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| |||||||||||||||||| |||||||||||||| ||||| || |||| |||||||||||||||||| ||||||||||||    
T  4894011 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttagttccgaaggagaaatcttataaattacggaaaattgttgt 4893913  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||| | |||||||||||||  ||||||||| |||||    
T  4893912 cctttatcattgtgaaaatcaaaactgcgtaaactaaaat 4893873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 249 - 387
Target Start/End: Complemental strand, 38896857 - 38896719
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaag-aagaaatcttataaattacagaaaattgttgt 347  Q
    ||||||||| ||| | ||| |||||||||||||||||| ||||||||| |||| ||||| |  |||| || |||||||||||||||||||||||||||||    
T  38896857 aactagttacaaacccgtgcttcgcacgggttgaataacgtatttttttaaaa-tttagtttcgaaggaaaaaatcttataaattacagaaaattgttgt 38896759  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    | |||||||||||||||||||||| |||||||||||||||    
T  38896758 catttataaatgtgaaaatcaaagctgcgtaaaccaaaat 38896719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 249 - 386
Target Start/End: Original strand, 24289200 - 24289337
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| || ||||||||||||||| |||||||||   |||||||| |  |||  ||||||||||||||||||||||||||||||||    
T  24289200 aactagttacaaacccgtgctttgcacgggttgaataacgtatttttttttaaatttagttttgaatgagaaatcttataaattacagaaaattgttgtc 24289299  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
     |||||||||||||||||||||| ||||||||||||||    
T  24289300 atttataaatgtgaaaatcaaagctgcgtaaaccaaaa 24289337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 249 - 386
Target Start/End: Complemental strand, 28573202 - 28573066
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| || ||||||||||||||| |||||||||  ||| ||||| |  |||| ||||||||||||||||||||||||||||||||    
T  28573202 aactagttacaaacccgtgctttgcacgggttgaataacgtattttttttaaa-tttagttttgaaggagaaatcttataaattacagaaaattgttgtc 28573104  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
     |||||||||||||||||||||| ||||||||||||||    
T  28573103 atttataaatgtgaaaatcaaagctgcgtaaaccaaaa 28573066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 247 - 387
Target Start/End: Original strand, 19320418 - 19320557
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||||| ||| | ||| || ||||||||||||||| ||||||||| |||| ||||| |  |||  |||||||||||||||||| |||||||||||    
T  19320418 aaaactagttacaaacccgtgctttgcacgggttgaataacgtatttttttaaaa-tttagtttcgaatgagaaatcttataaattacggaaaattgttg 19320516  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  19320517 tcctttttaaatgtgaaaatcaaagttgcgtaaaccaaaat 19320557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30786933 - 30786773
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||| ||||||| ||||| |||||| ||||||||||||||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  30786933 actaaaaccgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 30786835  T
Q  101 aaaaaagataagacca-ttttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| ||||||||||||||||||||||  || ||||||||||||||||||    
T  30786834 aaaagaggtaggaccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaag 30786773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 50305169 - 50305328
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatat--agtttaaagacgattttgttcgattt 100  Q
    |||||||||||||| ||||  |||||| ||||| ||||||||| |||  |||||||||||        ||||  ||||||| ||||||||||||||||||    
T  50305169 taaaactgtcatttatgtgtgtttatggagttgaaaatagggagatatgactaaaactgcaaaaaaaaatatatagtttaaggacgattttgttcgattt 50305268  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  50305269 aaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaattaa 50305328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 44954611 - 44954770
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||  || ||||||||| |||||    
T  44954611 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttatggatgattttgtttgattt 44954709  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||| || || ||||||| ||||||||||||||||  |||||||||||||||||||||    
T  44954710 aaaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaag 44954770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 10278710 - 10278548
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| ||||| ||| || ||||| |||| |||| |||| |||||||||||       |||||||||||  ||||||||||||||||||    
T  10278710 actaaaattgtcatttatgtgcgtttctggagttgcaaatggggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 10278611  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||| || || || || |||||||||||||||||||||  |||||||||||||||||||||||    
T  10278610 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagtc 10278548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 17641749 - 17641912
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncata----tagtttaaagacgattttgttcg 96  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||        |||    |||||||  ||||||||||||||    
T  17641749 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaataaaaatagtttagggacgattttgttcg 17641848  T
Q  97 atttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||| || || |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  17641849 atttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 249 - 386
Target Start/End: Original strand, 33074231 - 33074367
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| || ||||||||||||||| ||||||||| |||| ||||| || |||| |||||||||||||||||  ||||||||||  |    
T  33074231 aactagttacaaacccgtgctttgcacgggttgaataacgtatttttttaaaa-tttagttctgaaggagaaatcttataaattatggaaaattgttacc 33074329  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  33074330 ctttataaatgtgaaaatcaaagttgcgtaaaccaaaa 33074367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 247 - 387
Target Start/End: Original strand, 29184475 - 29184614
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||||| ||| | ||| ||||||||| |||||||| |||||||||||||| ||||| || |||  |||||||||||||||||  |||||||||||    
T  29184475 aaaactagttacaaacccgtgcttcgcacggattgaataacgtattttttaaaaa-tttagttccgaatgagaaatcttataaattatggaaaattgttg 29184573  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||| |||||||||||||||  ||||||||| |||||    
T  29184574 tcctttatcaatgtgaaaatcaaaactgcgtaaactaaaat 29184614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 50304532 - 50304440
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagt 162  Q
    ||||||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  50304532 catatagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagt 50304440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 30787251 - 30787342
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  30787251 catatagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaag 30787342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 37421323 - 37421163
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||  |||||||||||        |||||||||||  |||||||||||||||||    
T  37421323 actaaaactgtcatttctgtgcgtttttggagttggaaatagggaaatatgactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 37421224  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||| || |||||||| |||||||| ||||||||||||  | ||||||||||||||||||    
T  37421223 taaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaa 37421163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 37421397 - 37421488
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaa-gataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  37421397 catatagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaattaa 37421488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 382
Target Start/End: Complemental strand, 1376025 - 1375892
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| || ||||||||||||||| ||||||||| |||| ||||| || |||| |||||||||||||||||| ||||||||||      
T  1376025 aaactagttacaaacccgtgctttgcacgggttgaataacgtatttttttaaaa-tttagttctgaaggagaaatcttataaattacggaaaattgttac 1375927  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaacc 382  Q
    ||||||||||| |||||||||||| ||||||||||    
T  1375926 cctttataaatatgaaaatcaaagttgcgtaaacc 1375892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 29439375 - 29439465
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||| ||||||    
T  29439375 catatagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttgatcaaaatggtgggaccaaaagtgcaattaa 29439465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 249 - 387
Target Start/End: Complemental strand, 47137901 - 47137763
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||  |||| |||||||| |||  |||| |||||| ||||||||||| ||||| |||||||    
T  47137901 aactagttacaaacccgtgcttcgcacgggttgaataacgtaactttttaaaaatttcgcttcgaaggagaaatattataaattacggaaaaatgttgtc 47137802  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||| |||||||||| ||| |||||||||||    
T  47137801 ctttataaatgtaaaaatcaaagctgcataaaccaaaat 47137763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2868072 - 2867910
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || |||| || ||||||| |||  |||||||||||       |||||||||||| ||| ||||||||||||||    
T  2868072 actaaaactgtcatttatgtgcgtttttggagttagagatagggaaatatgactaaaactgcaaaaaa-catatagtttaacgacaattttgttcgattt 2867974  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtca 164  Q
    |||| ||||| || ||||||||||||||||||||||||  | |||||||| |||||||||||||    
T  2867973 aaaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaagtca 2867910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 387
Target Start/End: Complemental strand, 33363613 - 33363477
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| ||||||||| |||||||| |||||||||||||| ||||| || |||  |||||||||||||||||  ||||||||||||||    
T  33363613 actagttacaaacccgtgcttcgcacggattgaataacgtattttttaaaaa-tttagttccgaatgagaaatcttataaattatggaaaattgttgtcc 33363515  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||| |||||||||||||||  ||||||||| |||||    
T  33363514 tttatcaatgtgaaaatcaaaattgcgtaaactaaaat 33363477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 361
Target Start/End: Complemental strand, 42682635 - 42682522
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| |||||||||||||||||| |||||||||  ||||||||| || |||| | |||||||||||||||| ||||||||||||    
T  42682635 aaactagttacaaacccgtgcttcgcacgggttgaataacgtattttttttaaaatttagttctgaaggaaaaatcttataaattacggaaaattgttgt 42682536  T
Q  348 cctttataaatgtg 361  Q
    ||||||||||||||    
T  42682535 cctttataaatgtg 42682522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 44954387 - 44954229
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||| || || |||  |||||||||||       |||||| |||||||||||||||||| |||||    
T  44954387 actaaaactgtcatttctgtgcgtttctggagttggaaacagagagatacgactaaaactgcaaaaaa-catataatttaaagacgattttgttggattt 44954289  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||| || ||||||||||||||||||||||||||||  |||| |||| |||||||||    
T  44954288 aaaaaaggtatgaccattttcgtgagttggtcaaaatgggtggacaaaaaatgtaattaa 44954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 9992542 - 9992699
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    |||||||||||||| |  || ||| || ||||| ||||||||| |||| ||||| |||||       ||||||||||||  |||||||||||||||||||    
T  9992542 taaaactgtcatttctacgcgtttctggagttgaaaatagggagataggactaatactgcaaaaaa-catatagtttaagcacgattttgttcgatttaa 9992640  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||| |||||||||| |||||| |||||||||  |||||||||||||||||||||    
T  9992641 aaaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaag 9992699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 44582218 - 44582057
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| ||||| |||||| ||||||||| |  || |||| |||||||||||       |||||| |||| |||||||||||||||||||    
T  44582218 actaaaattgtcatttatgtgcgtttatggagttggaaacaaagagataggactaaaactgcaaaaaa-catataatttagagacgattttgttcgattt 44582120  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    |||| || || ||||| |||||| ||||||||||||||  |||||||||||||||||||||||    
T  44582119 aaaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaagtc 44582057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 50563465 - 50563377
Alignment:
Q  299 aaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||  |||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  50563465 aaaatttagcttcgaaggagaaatcttataaattatggaaaattgttgtcctttataaatgtgaaaatcaaagttgcgtaaaccaaaat 50563377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 247 - 382
Target Start/End: Original strand, 22194465 - 22194599
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||||| ||| | ||| || ||||||||||||||| ||||||||| |||| ||||  || |||| |||||||||||||||||| ||||||||||     
T  22194465 aaaactagttacaaacccgtgctttgcacgggttgaataacgtatttttttaaaa-tttaattccgaaggagaaatcttataaattacggaaaattgtta 22194563  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaacc 382  Q
     ||||||||||| |||||||||||| ||||||||||    
T  22194564 ccctttataaatatgaaaatcaaagttgcgtaaacc 22194599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 52335895 - 52336054
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||  |||||||||||        ||||||||||  ||||||||||||||||||    
T  52335895 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaa-atatagtttagggacgattttgttcgattt 52335993  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||| |||||||||||||||| ||| |||||||| |||||||||    
T  52335994 aaaagaggtaggaccaatttcatgagttggtcaaaatgatagaaccaaaagagtaattaag 52336054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 1837666 - 1837507
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| |||  |||||||||||       |||||||||||  ||| ||||||||||||||    
T  1837666 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa-catatagtttagggacaattttgttcgattt 1837568  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| ||||| || || |||||||||||| ||||||||  |||||||||||||||||||||    
T  1837567 aaaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaag 1837507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16299067 - 16299225
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||| |||||||| ||||| ||| || ||||||||||| ||| |||| |||||||||||       |||||||||||| ||||||||||||| |||     
T  16299067 actaaaattgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcaatta 16299165  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| ||| ||||||||||| |||||| ||||||||||||||| |||||| ||||||||    
T  16299166 aaaaaa-ataggaccattttcgcgagttgatcaaaatggtaggacaaaaagtataattaag 16299225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 4080182 - 4080026
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||| ||| |  ||||||||||||||| |||  ||||||||||        |||||||||||  ||||||||||||||||||    
T  4080182 actaaaactgtcatttttgtgcgtttctagagttggaaatagggagatatgactaaaactg-taaaaaacatatagtttagggacgattttgttcgattt 4080084  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 158  Q
    |||| || || || || ||||||||||||||||| |||  ||||||||||||||||||    
T  4080083 aaaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaatt 4080026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 37505453 - 37505617
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||||||||| ||| || ||||| ||||||||| |||| |||||||||||       |||||||||||  |||||||||||| | |||    
T  37505453 actaaaactgtcatttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaa--catatagtttatggacgattttgtttgtttt 37505550  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaa 167  Q
    |||| ||||| || || ||||||||||||||||||||   |||||||||| | |||||||| |||||    
T  37505551 aaaagagatatgatcaatttcgtgagttggtcaaaataaaaggaccaaaaatataattaagccaaaa 37505617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 384
Target Start/End: Complemental strand, 1828456 - 1828346
Alignment:
Q  273 cacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaagg 372  Q
    |||||||||||||| |||||||||  ||| ||||| |  |||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||     
T  1828456 cacgggttgaataacgtattttttttaaa-tttagttgtgaaggagaaatcttataaattacggaaaattgttgtcgtttataaatgtgaaaatcaaagc 1828358  T
Q  373 tgcgtaaaccaa 384  Q
    || |||||||||    
T  1828357 tgtgtaaaccaa 1828346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 361
Target Start/End: Complemental strand, 10763633 - 10763519
Alignment:
Q  246 taaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgtt 345  Q
    |||||||||||| ||| | ||| |||||||||||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| ||||| ||||    
T  10763633 taaaactagttacaaacccgtgcttcgcacgggttgaataacgtatttttttaaaa-tttagttttgaaggagaaatcttataaattacggaaaactgtt 10763535  T
Q  346 gtcctttataaatgtg 361  Q
    ||||||||||||||||    
T  10763534 gtcctttataaatgtg 10763519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 29439092 - 29438932
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||||| |||||||||  ||| |  | ||| |||||| || |||| |||||||||||       ||| |||||||  ||||||||||||||||||    
T  29439092 actaaaactgttatttttgtgtgttttttgaattgaaaatagagagataggactaaaactgcaaaaaaacatttagtttagggacgattttgttcgattt 29438993  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  29438992 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 29438932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 49587135 - 49587021
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaag 371  Q
    ||||||||||||||| |||||||||||||| ||||| |  |||| |||||||||||||||||| ||||||| || |||||||||||||| |||||||||     
T  49587135 gcacgggttgaataacgtattttttaaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattattatcctttataaatgtaaaaatcaaaa 49587037  T
Q  372 gtgcgtaaaccaaaat 387  Q
     || ||||||||||||    
T  49587036 ttgtgtaaaccaaaat 49587021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 2868093 - 2868252
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||||||| || ||||| ||| || ||||||||||||||  |||  |||||||||||       |||||||| ||  ||||||||||||||||||    
T  2868093 actaaaactgtcacttatgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtgtagggacgattttgttcgattt 2868191  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||||||||||| |||||||||||||  |||| ||||||||||||||||    
T  2868192 aaaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaag 2868252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 361
Target Start/End: Original strand, 29840689 - 29840800
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| ||||||||| |||| ||||| |  |||| ||||||||||||||||||  ||||||||||||    
T  29840689 aactagttacaaacccgtgcttcgcacgggttgaataacgtatttttttaaaa-tttagttttgaaggagaaatcttataaattacgaaaaattgttgtc 29840787  T
Q  349 ctttataaatgtg 361  Q
    |||||||||||||    
T  29840788 ctttataaatgtg 29840800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 34555542 - 34555381
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgatt 99  Q
    ||||||||| |||||| ||||| ||| || ||||||||||||||| |||| ||||||||||         |||||||||||  |||||||||||||||||    
T  34555542 actaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaaacatatagtttagggacgattttgttcgatt 34555443  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| || ||  |||| ||||| ||||| |||||||||  |||||||||||||||||||||    
T  34555442 taaaagaggtagcaccaatttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaag 34555381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 51964532 - 51964600
Alignment:
Q  319 aaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  51964532 aaatcttataaattacggaaagttgttgtcctttataaatgtgaaaatcaaaggtgcggaaaccaaaat 51964600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 300 - 387
Target Start/End: Complemental strand, 5428306 - 5428220
Alignment:
Q  300 aaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  5428306 aaatttagctccgaaagagaaatcttataaat-acggaaaattgttgtcttttataaatgtgaaaatcaaagctgcgtaaaccaaaat 5428220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 443936 - 444095
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| || || |||||| | ||||||||||||| |||| |||||||||||       |||||||||||   |||||||||||||||||    
T  443936 actaaaactgtcatttatgcgcgtttatggaattggaaatagggagataggactaaaactgcaaaaaa-catatagtttaggaacgattttgttcgattt 444034  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||| | |||||||||||||||||||||  | || ||||||| ||||||||    
T  444035 aaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaagatcaaaagtataattaag 444095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 8229801 - 8229639
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn--catatagtttaaagacgattttgttcgat 98  Q
    |||||||||||||||| ||||| ||| || |||| |||||||||| |||| |||||||||||         ||||||||||| |||||||||| ||||||    
T  8229801 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaaacatatagtttagagacgattttattcgat 8229702  T
Q  99 ttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||| |  ||  | ||||||||||||||| ||||||||  |||| ||||||||||||||||    
T  8229701 ttaaaagatgtagaatcattttcgtgagttgatcaaaatgtgaggatcaaaagtgtaattaag 8229639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 23340344 - 23340178
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| || || ||| || ||||||||||| ||| |||  |||||||||||        ||||||||||    ||||||||||||||||    
T  23340344 actaaaactgtcatttctgagcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaat-atatagtttatgagcgattttgttcgattt 23340246  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaat 168  Q
    |||| ||||| ||||| |||||||||||||||||||||  | || |||||||||||||||| ||||||    
T  23340245 aaaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaagccaaaat 23340178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 8230026 - 8230184
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||  |||  |||||||||||       |||||||||||  ||||||||||||||||||    
T  8230026 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaa-catatagtttagggacgattttgttcgattt 8230124  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| || ||  ||||||||||||| | ||||||||||  || ||||||| |||||||||    
T  8230125 aaaagaggtataaccattttcgtgaataggtcaaaatgcgagaaccaaaaatgtaattaa 8230184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 16298813 - 16298684
Alignment:
Q  31 agttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttgg 130  Q
    ||||||||||||| | |||| |||||||||||       |||||||||||  |||||||||||||||||||||| || || ||||| |||||||||||||    
T  16298813 agttggaaataggtagataggactaaaactgcaaaaaa-catatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgg 16298715  T
Q  131 tcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  ||| |||||| ||||||||||    
T  16298714 tcaaaatgcaagggccaaaaatgtaattaag 16298684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 387
Target Start/End: Complemental strand, 16302166 - 16302047
Alignment:
Q  272 gcacgggttgaataatgtat----tttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatc 367  Q
    ||||||||||||||| ||||    ||||| | ||||||||||   ||| | ||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  16302166 gcacgggttgaataacgtatatttttttttataaatttagcttcaaaggataaatcttataaattacgtaaaattgttgtcttttataaatgtgaaaatc 16302067  T
Q  368 aaaggtgcgtaaaccaaaat 387  Q
    |||  |||||||||||||||    
T  16302066 aaatctgcgtaaaccaaaat 16302047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17641526 - 17641403
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||||||||||||| |       | ||||||||||  || ||||||||||||||    
T  17641526 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaactaaaactac-aaaaaacgtatagtttaagaacaattttgttcgattt 17641428  T
Q  101 aaaaaagataagaccattttcgtga 125  Q
    ||||||| || ||||||||||||||    
T  17641427 aaaaaaggtatgaccattttcgtga 17641403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 39485158 - 39485068
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||  |||||||||||||||||| ||| || || ||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  39485158 catatagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaa 39485068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 45048248 - 45048158
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||  ||||||||||||| |||||||| || ||  ||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  45048248 catatagtttatggacgattttgttcaatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 46623396 - 46623513
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    |||||||| ||||||||| ||||||||| |||| ||||| |  |||| ||||||||||||||||||  |||||| ||||  ||||||||| ||||||| |    
T  46623396 ttcgcacgagttgaataacgtatttttttaaaa-tttagtttcgaaggagaaatcttataaattacgaaaaattattgtaatttataaatatgaaaataa 46623494  T
Q  369 aaggtgcgtaaaccaaaat 387  Q
    ||  |||||||||||||||    
T  46623495 aaaatgcgtaaaccaaaat 46623513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 50926320 - 50926231
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagt 162  Q
    ||||||||  |||||||||||||||||| ||| || || ||  ||||||||||| |||||||||||| |||||||||| |||||||||||    
T  50926320 atagtttagggacgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaactgtaattaagt 50926231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 6224860 - 6224700
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnnc-atatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||| ||| || |||||||||||| || |||  ||||||||||          ||||| ||||| |||||||||||||||||    
T  6224860 actaaaactgtcatttatgtgcgtttctggagttggaaatagagagataagactaaaactgtaaaaaatatatataatttaaggacgattttgttcgatt 6224761  T
Q  100 taaaaaagataaga-ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||| | |||| |||||||  |||||||||||||||| ||||| ||||| |||||||||    
T  6224760 taaaaaa-acaagaaccatttttatgagttggtcaaaatgataggatcaaaaatgtaattaa 6224700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 23526735 - 23526660
Alignment:
Q  86 gattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||||||| ||  | ||||||||||||||| |||||||||||  |||||||||||||||| ||||    
T  23526735 gattttgttcgatttaaaagaggcaggaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaactaag 23526660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 44291391 - 44291297
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaa 167  Q
    ||||||||  ||||||||||||| |||| ||| ||  |  |||||||||||||| |||||||||||  ||||||||||||| |||||||||||||    
T  44291391 atagtttatggacgattttgttcaatttgaaagaggcataaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaagtcaaaa 44291297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 1744488 - 1744330
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||  |||||||||||        ||||||||||  ||||||||| || || |     
T  1744488 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaatatatagtttagggacgattttatttgact- 1744390  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
     |||||| || || ||||| |||||||| ||||||||   | |||||||||||||||||||    
T  1744389 -aaaaaggtaggatcatttacgtgagtttgtcaaaatacgaagaccaaaagtgtaattaag 1744330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 23526986 - 23527074
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||| ||||| ||||||||||||||||||||  | |||||||||| |||| || ||||||||  |||| ||||||| ||||||||    
T  23526986 atagtttagagacggttttgttcgatttaaaaaaggcatgaccattttcatgagctgatcaaaatgtgaggatcaaaagtataattaag 23527074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 50926697 - 50926785
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||| ||||||||||||| ||| |||   ||||||||||||||| |||||||||||  | |||||||||||||||||||    
T  50926697 atagtttagggacggttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaag 50926785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 17088593 - 17088683
Alignment:
Q  71 atatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||  |||| ||||||| ||||| ||| ||  | ||||||||||||||| || ||||||||  |||||||||||||||||||||    
T  17088593 atatagtttagggacggttttgtttgatttgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaag 17088683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 29021331 - 29021409
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||| ||| ||  | || |||||||||||| |||||||||||  ||||||||||||| |||||||    
T  29021331 gacgattttgttcgatttgaaagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaag 29021409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 45048601 - 45048678
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||| ||||||||||||  ||| || || ||||||||||||||  |||||||||||  ||||||||||||||||||||    
T  45048601 gacggttttgttcgattggaaagaggtatgaccattttcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaa 45048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 44802627 - 44802715
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||||||||||||  ||| ||| ||  | ||||| ||||||||| |||||||||||  |||||||||||||||||||||    
T  44802627 atagtttagggacgattttgttccgtttgaaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaag 44802715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 25274831 - 25274760
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 159  Q
    ||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  ||||||||||||| |||||    
T  25274831 ttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgcaatta 25274760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 50419464 - 50419393
Alignment:
Q  89 tttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||||||| ||||||| | ||||||||| ||||||||||  |||||  ||||||||||||| ||||||    
T  50419464 tttgttcgatttgaaaaagacatgaccatttttgtgagttggtttaaatgcgaggaccaaaagtgcaattaa 50419393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 17088226 - 17088148
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| ||||||||||||| ||| ||  || |||||||||||||| |||||||||||  | |||||| ||||||||||||    
T  17088226 gacggttttgttcgatttgaaagaggcaaaaccattttcgtgagctggtcaaaatgcgatgaccaacagtgtaattaag 17088148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 305
Target Start/End: Complemental strand, 29693432 - 29693374
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    ||||||||||| ||| | ||| |||||||||||||||| | ||||||||||||||||||    
T  29693432 aaaactagttacaaacccgtgcttcgcacgggttgaattacgtattttttaaaaaattt 29693374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 52037385 - 52037443
Alignment:
Q  244 aataaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    |||| ||||||||| ||| | ||| |||||||||||||||| |||||||||||||||||    
T  52037385 aatagaactagttacaaacccgtgcttcgcacgggttgaattatgtattttttaaaaaa 52037443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30787157 - 30787214
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaa 58  Q
    |||||||||||||||| | |||||||||| ||||| ||||||||| |||| |||||||    
T  30787157 actaaaactgtcatttctctgcatttatggagttgaaaatagggaaataggactaaaa 30787214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 39843497 - 39843564
Alignment:
Q  90 ttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 157  Q
    ||||||||||| ||||||  | ||||| ||||||||||||||| |||||  |||||| ||||||||||    
T  39843497 ttgttcgatttgaaaaaggcaggaccaatttcgtgagttggtctaaatgcgaggaccgaaagtgtaat 39843564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 44291777 - 44291831
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaat 137  Q
    ||||||||| |||||||||||| ||| | |||||||||| |||| ||||||||||    
T  44291777 gacgattttattcgatttaaaagagacatgaccattttcatgagctggtcaaaat 44291831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 36228868 - 36228795
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||| |||||||| || |||||||||||| ||||| || | ||||||  |||| |||||||| |||||||    
T  36228868 ttttgttcaatttaaaagaggtaagaccatttttgtgagctgattaaaatgtgaggatcaaaagtgcaattaag 36228795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 50419731 - 50419804
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||| |||| ||||||  | ||||| ||||||||||||||| |||||  | ||||||||||| |||||||    
T  50419731 ttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaag 50419804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 9833618 - 9833670
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaa 135  Q
    |||||||||||||||||| ||| ||  | ||| ||||||||||||||||||||    
T  9833618 gacgattttgttcgatttgaaagaggcatgactattttcgtgagttggtcaaa 9833670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 28631857 - 28631797
Alignment:
Q  245 ataaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    ||||||||||||| ||| | ||| ||||||||||||||||||  ||| || ||||||||||    
T  28631857 ataaaactagttacaaacccgtgcttcgcacgggttgaataacatatcttgtaaaaaattt 28631797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 33144413 - 33144473
Alignment:
Q  112 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaa 172  Q
    ||||| |||||||||| || |||||    ||||||||||||||||||||||||||| ||||    
T  33144413 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagtcaaaaaaaaa 33144473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 28290029 - 28290188
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||| ||||||||||||||||||    
T  28290029 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 28290127  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28290128 aaaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 28290188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 15029694 - 15029853
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || |||| |||||||||| || |||||||||||||       |||||||||||| ||||||||||||||||||    
T  15029694 actaaaactgtcatttatgtgcgtttctggagtttgaaatagggagatcgaactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 15029792  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15029793 aaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaag 15029853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 19291518 - 19291352
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| |||||| ||||||||||| ||| |||  |||||||||||       |||||||||||| ||||||||||||||||||    
T  19291518 actaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 19291419  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaa 167  Q
    |||||||||| ||||||||| |||||||| ||||||| ||||||||||||||||||||||| |||||    
T  19291418 aaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaagccaaaa 19291352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 8419008 - 8419164
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    ||||| |||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||        ||||||||||| ||||||||||||| ||||||    
T  8419008 taaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa--atatagtttaaggacgattttgttcaatttaa 8419105  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8419106 aaaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 8419164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 18149873 - 18149735
Alignment:
Q  22 catttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataagaccattttc 121  Q
    |||||||| ||||||||||||||| |||| |||||||||||       |||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  18149873 catttatggagttggaaatagggaaataggactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttc 18149775  T
Q  122 gtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  18149774 gtgagttggtccaaatggtaggatcaaaagtgtaattaag 18149735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 269 - 387
Target Start/End: Complemental strand, 30181433 - 30181316
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    |||||||||||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  30181433 ttcgcacgggttgaataacgtattttt-aaaaaatttaactccgaagaagaaatcttataaattacggaaaattattgtcctttatcaatgtgaaaatca 30181335  T
Q  369 aaggtgcgtaaaccaaaat 387  Q
    ||  |||||||||||||||    
T  30181334 aaactgcgtaaaccaaaat 30181316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 248 - 386
Target Start/End: Original strand, 752054 - 752191
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| || ||||||||||||||| |||||||||  ||| ||||| |  |||| |||||||||||||||||||||||||||||||    
T  752054 aaactagttacaaacccgtgctttgcacgggttgaataacgtattttttttaaa-tttagttttgaaggagaaatcttataaattacagaaaattgttgt 752152  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    | |||||||||||||||||||||| ||||||||||||||    
T  752153 catttataaatgtgaaaatcaaagctgcgtaaaccaaaa 752191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 36884780 - 36884917
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| ||| |||||||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||| |||||||||||||    
T  36884780 aactagttacaaacccgtgcttcacacgggttgaataacgtatttttttaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgtc 36884878  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  36884879 ctttataaatgtgaaaatcaaagctacgtaaaccaaaat 36884917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 250 - 387
Target Start/End: Original strand, 3086433 - 3086570
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| |||||||||||||||||| |||||||||  ||||||||| |  |||| |||||||||||||||||| |||||||||||| |    
T  3086433 actagttacaaacccgtgcttcgcacgggttgaataacgtattttttttaaaatttagtttcgaaggagaaatcttataaattacggaaaattgttgttc 3086532  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||| |||||||||||| |||||||| ||||||    
T  3086533 tttataaatatgaaaatcaaagctgcgtaaatcaaaat 3086570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 249 - 386
Target Start/End: Original strand, 43136273 - 43136410
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| || ||||||||||||||| |||||||||   |||||||| |  |||  ||||||||||||||||||||||||||||||||    
T  43136273 aactagttacaaacccgtgctttgcacgggttgaataacgtatttttttttaaatttagttttgaatgagaaatcttataaattacagaaaattgttgtc 43136372  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
     |||||||||||||||||||||| ||||||||||||||    
T  43136373 atttataaatgtgaaaatcaaagctgcgtaaaccaaaa 43136410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 4967154 - 4967315
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnn-catatagtttaaagacgattttgttcgatt 99  Q
    ||||||||| |||||| ||||| ||| |  |||| ||||||||||||||| |||||||||||        |||||||||||  |||||||||||||||||    
T  4967154 actaaaactatcatttatgtgcgtttctagagttagaaatagggatataggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 4967253  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||| || |||||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  4967254 taaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 4967315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 38901027 - 38901200
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| ||  |||||||||| ||| ||| ||||||||||||       |||||||||||| ||||||||||||||||||    
T  38901027 actaaaactgtcatttatgtgcgtttctg--gttggaaataaggagatataactaaaactgcaaaaaa-catatagtttaaggacgattttgttcgattt 38901123  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtcaaaataaaatagaa 177  Q
    ||||| | || |||||||||||||  || |||||||||| ||||||||||||||||||||| ||||| ||| |||||    
T  38901124 aaaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaagccaaaaaaaattagaa 38901200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 249 - 387
Target Start/End: Complemental strand, 34719500 - 34719363
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||||||||||||| ||||| |  |||| |||||||||||||||||| |||||||||||||    
T  34719500 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgtc 34719402  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||| | |||||||||||||  ||||||||| |||||    
T  34719401 ctttatcattgtgaaaatcaaaactgcgtaaactaaaat 34719363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 269 - 387
Target Start/End: Complemental strand, 41693164 - 41693047
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    |||||||||||||||||| |||||||||||||| ||||| || |||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||    
T  41693164 ttcgcacgggttgaataacgtattttttaaaaa-tttagttccgaaggagaaatcttataaattacggaaaattgttgtcctttatcattgtgaaaatca 41693066  T
Q  369 aaggtgcgtaaaccaaaat 387  Q
    ||  ||||||||| |||||    
T  41693065 aaactgcgtaaactaaaat 41693047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 250 - 387
Target Start/End: Original strand, 25695539 - 25695675
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcc 349  Q
    |||||||| ||| | ||| |||||||||||||||||| |||||||||||||| ||||| |  |||| |||||||||||||||||| ||||||||||||      
T  25695539 actagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgtta 25695637  T
Q  350 tttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||| |||||||||||||||  |||||||||||||||    
T  25695638 tttatcaatgtgaaaatcaaaactgcgtaaaccaaaat 25695675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 15115480 - 15115636
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| |  ||||||||||||||  |||  |||||||||||        ||||||||||| ||||||||||||||||||    
T  15115480 actaaaactgtcatttatgtgcgttttttgagttggaaatagggcgatatgactaaaactgcaaaa----atatagtttaaggacgattttgttcgattt 15115575  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || |||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  15115576 aaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaag 15115636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 17636708 - 17636822
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaag 371  Q
    ||||||||||||||| ||||||||| |||| | ||| |  |||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17636708 gcacgggttgaataacgtatttttttaaaa-tatagtttcgaatgagaaatcttataaattacagaaaattattgtcctttataaatgtgaaaatcaaag 17636806  T
Q  372 gtgcgtaaaccaaaat 387  Q
     |||||||||||||||    
T  17636807 ctgcgtaaaccaaaat 17636822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 38900800 - 38900648
Alignment:
Q  6 aactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaa 105  Q
    ||||||||||| ||| | |||||| ||||||||||||||| |||| |||||||||||       |||||| ||||  ||||||||||||||||||||||     
T  38900800 aactgtcatttatgtacgtttatggagttggaaatagggagataggactaaaactgcaaaaaa-catataatttagggacgattttgttcgatttaaaag 38900702  T
Q  106 agataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 159  Q
    || || || ||||||||||||||||||||||||  |||||||||||||||||||    
T  38900701 aggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 14340479 - 14340401
Alignment:
Q  82 agacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||    
T  14340479 agacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaa 14340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 250 - 387
Target Start/End: Original strand, 34725259 - 34725397
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtatt-ttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    |||||||| ||| | ||| |||||||||||| |||||  |||| ||||  ||||||||| || |||| ||||||||||||||||||  ||||||||||||    
T  34725259 actagttacaaacccgtgcttcgcacgggttaaataacatattcttttttaaaatttagttccgaaggagaaatcttataaattacgaaaaattgttgtc 34725358  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  34725359 ctttataaatgtgaaaatcaaagctgcgtcaaccaaaat 34725397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 42975438 - 42975526
Alignment:
Q  299 aaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||| |  |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42975438 aaaatttagttttgaaggagaaatcttataaattacaaaaaattgttgtcctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 42975526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 28289845 - 28289686
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| ||||||||||        |||||| ||||  ||||||||||||||||||    
T  28289845 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactg-gaaaaaacatataatttagggacgattttgttcgattt 28289747  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||| | |||||||||||||||||||||  |||| ||||||||||||||||    
T  28289746 aaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaag 28289686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 18150108 - 18150268
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||| ||||||| ||||| ||| || ||||||||||||||| |||| |||||||||||       |||||||||||  || |||||||||||||||    
T  18150108 actaaaacggtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggatgattttgttcgattt 18150207  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| ||||||||||| ||||||||   |||| || |||||||||||||    
T  18150208 aaaagaggtaggaccaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaag 18150268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 21370776 - 21370689
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| ||||||| |||| | |||||||    
T  21370776 atagtttaaagacgattttgttcgatttaaaaaagatataaccattttcgtcagttggtcaaaatagtaggacaaaaaatataattaa 21370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 21371081 - 21371240
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| ||||| ||| || ||||||||||||||| |||| ||||||| |||       |||||||||||  |||||||||||| |||||    
T  21371081 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaa-catatagtttagggacgattttgtttgattt 21371179  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || || ||||| |||  ||||||||||||||||  |||| ||||||||||||||||    
T  21371180 aaaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaag 21371240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 39083521 - 39083359
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnnc-atatagtttaaagacgattttgttcgatt 99  Q
    |||||||||||||||| ||||  ||| || ||||||||||| ||| |||  |||||||||||         |||||||||||  || |||||||||||||    
T  39083521 actaaaactgtcatttctgtgtgtttctggagttggaaatatggagatatgactaaaactgcaaaaaatatatatagtttaagaacaattttgttcgatt 39083422  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  39083421 taaaaaaaataggaccattttcgtgagttggtcaaaatgataggatc-aaagtgtaattaagtc 39083359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 5161744 - 5161620
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    |||||||||||||||| | ||| ||| |||||||||||||||| | |||  |||||||||||       |||||| ||||||||| ||||||||||||||    
T  5161744 actaaaactgtcatttctatgcgtttttgaagttggaaataggaagataagactaaaactgcaaaaaaacatataatttaaagacaattttgttcgattt 5161645  T
Q  101 aaaaaagataagaccattttcgtga 125  Q
    |||||||||| ||| ||||||||||    
T  5161644 aaaaaagatatgacaattttcgtga 5161620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 4966973 - 4966819
Alignment:
Q  4 aaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaa 103  Q
    ||||||||||||| ||||||||| |  ||||||||||||||  |||  |||||||||||       |||||||||||  |||||||||||||||||||||    
T  4966973 aaaactgtcatttctgtgcatttctagagttggaaatagggg-atatgactaaaactgctaaaaa-catatagtttagggacgattttgttcgatttaaa 4966876  T
Q  104 aaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    | ||  |  || |||||||||||||||||||||||  ||||||||||||||||||||    
T  4966875 agaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 2182848 - 2182760
Alignment:
Q  299 aaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||| |||| |||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||| | ||||||| |||||    
T  2182848 aaaatttagctccgaaggagaaatattataaattacggaaaattgttgtcctttataattgtgaaaattaaagttacgtaaactaaaat 2182760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 32697679 - 32697770
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  ||||||| |||||||||||||| || || ||||| |||||||||||||||||||||  | |||||||||||||||||||    
T  32697679 catatagtttagggacgattctgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaag 32697770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 10721866 - 10721788
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||  |||||||||| ||||||||||    
T  10721866 gacgattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaag 10721788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 14340864 - 14340953
Alignment:
Q  71 atatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||||  |||||||||||||||||||||| |  || ||||| |||||||||||||||||||||  || ||||||| |||||||||    
T  14340864 atatagtttatggacgattttgttcgatttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaa 14340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 22651767 - 22651855
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||||||||||||||||| ||||||  |  |||||||||||||| |||||||||||  ||||| |||||||||||||||    
T  22651767 atagtttatggacgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaag 22651855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 33704785 - 33704892
Alignment:
Q  279 ttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgta 378  Q
    |||||||| |||||||||||||| ||||| |  |||  | ||||||||||||||| |||||||| | || |||||||||||| ||| |||||| ||||||    
T  33704785 ttgaataacgtattttttaaaaa-tttagtttcgaatgaaaaatcttataaattatagaaaattatcgttctttataaatgtaaaagtcaaagctgcgta 33704883  T
Q  379 aaccaaaat 387  Q
    |||||||||    
T  33704884 aaccaaaat 33704892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 16752675 - 16752584
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  |||||||||||||||||| ||| |   | || |||||||||||| |||||||||||   ||||||||||||||||||||    
T  16752675 catatagtttatggacgattttgttcgatttgaaagaagcatgatcattttcgtgagctggtcaaaatgcagggaccaaaagtgtaattaag 16752584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 20266371 - 20266458
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    ||||||||  |||||||||||||||||| ||| ||| | |||||||||||| || ||||||||||   ||||||||||||| ||||||    
T  20266371 atagtttagggacgattttgttcgatttgaaagagacatgaccattttcgtaagctggtcaaaatacgaggaccaaaagtgcaattaa 20266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 41834525 - 41834603
Alignment:
Q  83 gacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| ||||||||||| | ||| ||  | ||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  41834525 gacggttttgttcgatctgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 41834603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 5161974 - 5162113
Alignment:
Q  22 catttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaaaaagataagaccattttc 121  Q
    ||||| |||||||| |||| |||| |||| ||||||| |||       |||||| ||||  |||||||||||||||||||||| || || ||| | | ||    
T  5161974 catttctgaagttgtaaattgggagataggactaaaattgcaaaaaaacatataatttagggacgattttgttcgatttaaaagaggtatgactaatctc 5162073  T
Q  122 gtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
     ||||||||||||||||  ||||  |||| ||||||||||    
T  5162074 atgagttggtcaaaatgcaaggataaaaaatgtaattaag 5162113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 16753066 - 16753116
Alignment:
Q  113 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagtc 163  Q
    ||||||||||||||||||||||||||  | |||||||| ||||||||||||    
T  16753066 accattttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaagtc 16753116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 2366839 - 2366892
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    ||||||||| ||| |||||||||||||||||||||||| |||| || |||||||    
T  2366839 aactagttacaaacctgtgtttcgcacgggttgaataacgtatcttgtaaaaaa 2366892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 361
Target Start/End: Original strand, 12588368 - 12588405
Alignment:
Q  324 ttataaattacagaaaattgttgtcctttataaatgtg 361  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  12588368 ttataaattacggaaaattgttgtcctttataaatgtg 12588405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 17260691 - 17260764
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||| || ||  | ||||||||||| ||||||||||||  ||||||||||||| |||||||    
T  17260691 ttttgttcgatttgaaagaggtagaatcattttcgtgaattggtcaaaatgcgaggaccaaaagtgcaattaag 17260764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 9809820 - 9809876
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    ||||||||| ||| | ||| ||||||||||||||||||||||| || ||||||||||    
T  9809820 aactagttacaaacccgtgcttcgcacgggttgaataatgtatcttgtaaaaaattt 9809876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22651506 - 22651346
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncat-atagtttaaagacgattttgttcgatt 99  Q
    |||||||||| ||||||||||| ||| || ||||| ||||| |||  ||| |||||||||||       ||| ||||||||| || | ||||||| ||||    
T  22651506 actaaaactgccatttttgtgcgtttctggagttgaaaataaggaggtaggactaaaactgcaaaaa--catgatagtttaaggatggttttgtttgatt 22651409  T
Q  100 taaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagt 162  Q
    ||||| ||  | |||||||| |||||| ||||||||||   || ||||||| |||||||||||    
T  22651408 taaaagaggcatgaccatttccgtgagctggtcaaaatacgagaaccaaaaatgtaattaagt 22651346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 1685045 - 1685100
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    ||||||||||| ||| | ||| |||||||||||||||| |||||||||| ||||||    
T  1685045 aaaactagttacaaacccgtgcttcgcacgggttgaattatgtatttttaaaaaaa 1685100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 12702061 - 12702116
Alignment:
Q  250 actagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    |||||||| ||| | ||| ||||||||||||||||||||||| || ||||||||||    
T  12702061 actagttacaaacccgtgcttcgcacgggttgaataatgtatcttgtaaaaaattt 12702116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 27307138 - 27307063
Alignment:
Q  86 gattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||| |||| ||| | | | |||||||||| | ||||||||||||||  || ||||||||||||||||||    
T  27307138 gattttgttcaatttgaaagaaacatgaccattttcataagttggtcaaaatgcgagaaccaaaagtgtaattaag 27307063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 27307513 - 27307604
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||  |||| ||||||||||||| ||| ||  |  |||||||||||||  |||||||||||   ||||||||||| ||||||||    
T  27307513 catatagtttatggacggttttgttcgatttgaaagagggagaaccattttcgtgaactggtcaaaatgcggggaccaaaagtctaattaag 27307604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 13596962 - 13596908
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaa 302  Q
    |||||||||| ||| | ||| |||||||||||||||| | |||||||||||||||    
T  13596962 aaactagttacaaacccgtgcttcgcacgggttgaattacgtattttttaaaaaa 13596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 28495301 - 28495375
Alignment:
Q  87 attttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||||||||||||| ||| ||  | ||||||||||||||| ||||||||||     |||||||||||||||||||    
T  28495301 attttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatatggagaccaaaagtgtaattaag 28495375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 13557074 - 13557017
Alignment:
Q  81 aagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatg 138  Q
    |||||||||||||| ||||| ||| ||  | ||||||||||||||| |||||||||||    
T  13557074 aagacgattttgtttgatttgaaagaggcatgaccattttcgtgagctggtcaaaatg 13557017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 28494919 - 28494846
Alignment:
Q  88 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||| ||| ||  |  ||||||||| |||  |||||||||||  |||||||||||||||||||||    
T  28494919 ttttgttcgatttgaaagaggcagaaccattttcctgaactggtcaaaatgtaaggaccaaaagtgtaattaag 28494846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 32305908 - 32305843
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatg 138  Q
    ||||||||  |||||||||||||||||||||| || ||  || ||||||||||| || ||||||||    
T  32305908 atagtttagggacgattttgttcgatttaaaagaggtagaacaattttcgtgagctgatcaaaatg 32305843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 7863528 - 7863584
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||| || ||||||||||    
T  7863528 aactagttacaaacccgtgcttcgcacgggttgaataacgtatcttgtaaaaaattt 7863584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 46655 - 46812
Alignment:
Q  4 aaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaaa 103  Q
    |||| |||||||| ||||| ||| || ||||||||||||||  |||||||||||||| |       ||||||||||||||||||||||||||||||||||    
T  46655 aaaattgtcatttatgtgcgtttttggagttggaaatagggtgatagaactaaaactacaaaaaaacatatagtttaaagacgattttgttcgatttaaa 46754  T
Q  104 aaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46755 atatataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 46812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 46428 - 46268
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgattt 100  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| |||  |||||||||||       |||||||||||  || |||||||||||||||    
T  46428 actaaaactgtcatttttgtgcatttatggaattggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggatgattttgttcgattt 46329  T
Q  101 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    |||| || ||  ||||||||||| ||||||||||||||  ||||||||||||| |||||||    
T  46328 aaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaag 46268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 3446 - 3561
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaag 371  Q
    ||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  3446 gcacgggttgaataacgtattttttaaaaaatttagctccgaaggagaaatcttataaattacgaaaaattgttgttctttataaatgtgaaaatcaaag 3545  T
Q  372 gtgcgtaaaccaaaat 387  Q
     |||||||||||||||    
T  3546 ctgcgtaaaccaaaat 3561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 6551 - 6394
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    |||||||||||||| ||||| ||| |||||||||||||||| | |||| |||||||||||       |||||| ||||| ||||||||||||||||||||    
T  6551 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaa-catataatttaaggacgattttgttcgatttaa 6453  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  ||||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  6452 aaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaag 6394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 6776 - 6939
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatataga----actaaaactgcnnnnnnncatatagtttaaagacgattttgttcg 96  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| ||||     |||||||||||       ||| |||||||   |||||||||||||    
T  6776 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcg 6875  T
Q  97 atttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||| |  |||||||| |||||| | ||||||||||||  ||||||||||| ||||||||    
T  6876 atttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 6569 - 6412
Alignment:
Q  3 taaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgcnnnnnnncatatagtttaaagacgattttgttcgatttaa 102  Q
    |||||||||||||| ||||| ||| |||||||||||||||| | |||| |||||||||||       |||||| ||||| ||||||||||||||||||||    
T  6569 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaa-catataatttaaggacgattttgttcgatttaa 6471  T
Q  103 aaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  ||||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  6470 aaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaag 6412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 6794 - 6957
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatataga----actaaaactgcnnnnnnncatatagtttaaagacgattttgttcg 96  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||||| ||||     |||||||||||       ||| |||||||   |||||||||||||    
T  6794 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcg 6893  T
Q  97 atttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 160  Q
    |||||||| |  |||||||| |||||| | ||||||||||||  ||||||||||| ||||||||    
T  6894 atttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 246 - 386
Target Start/End: Complemental strand, 11277 - 11138
Alignment:
Q  246 taaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgtt 345  Q
    |||||||||||| ||| | ||| || ||||||||||||||| ||||||||| |||| ||||| |  |||| |||||||||||||||||||||||||||||    
T  11277 taaaactagttacaaacccgtgctttgcacgggttgaataacgtatttttttaaaa-tttagttttgaaggagaaatcttataaattacagaaaattgtt 11179  T
Q  346 gtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    ||| |||||||||||||||||||||| ||||||||||||||    
T  11178 gtcatttataaatgtgaaaatcaaagctgcgtaaaccaaaa 11138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 247 - 387
Target Start/End: Complemental strand, 14692 - 14553
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttg 346  Q
    ||||||||||| ||| | ||| |||||||||||||||||| |||||||||||||| ||||| || |||| ||||||||||||||||||  ||||||||||    
T  14692 aaaactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaa-tttagttccgaaggagaaatcttataaattacgaaaaattgttg 14594  T
Q  347 tcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||| |||||||||||||||  |||||||||||||||    
T  14593 tcctttatgaatgtgaaaatcaaaactgcgtaaaccaaaat 14553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 248 - 387
Target Start/End: Original strand, 8174 - 8312
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| ||||||||||||||||||  |||||||| |||| ||||| |  |||| |||||||||||||||||| ||||||||||||    
T  8174 aaactagttacaaacccgtgcttcgcacgggttgaataacatatttttttaaaa-tttagtttcgaaggagaaatcttataaattacggaaaattgttgt 8272  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  8273 cctttataaatgtgaaaatcaaagctgcgtaaaccaaaat 8312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 55603 - 55464
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgt 347  Q
    |||||||||| ||| | ||| |||||||| ||||||||| |||||||||  |||||| ||||| |||| | |||||||||||||||| ||||||||||||    
T  55603 aaactagttacaaacccgtgcttcgcacgagttgaataacgtattttttttaaaattcagctccgaaggaaaaatcttataaattacggaaaattgttgt 55504  T
Q  348 cctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  55503 cctttataaatgtaaaaatcaaagctgcgtaaaccaaaat 55464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 139601 - 139480
Alignment:
Q  265 gtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaa 364  Q
    |||||||||||||||||||| | ||||||||| |||| ||||  |  |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  139601 gtgtttcgcacgggttgaattacgtatttttttaaaa-tttaattttgaaggagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaa 139503  T
Q  365 atcaaaggtgcgtaaaccaaaat 387  Q
    ||||||| |||||||||||||||    
T  139502 atcaaagctgcgtaaaccaaaat 139480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 312 - 387
Target Start/End: Complemental strand, 233204 - 233129
Alignment:
Q  312 gaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  233204 gaagaagacatcttataaattttagaaaattgttgtcctttataaatgtgaaaatcaaagctgcttaaaccaaaat 233129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 17400 - 17537
Alignment:
Q  249 aactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtc 348  Q
    ||||||||| ||| | ||| |||||||||||||||||| |||||||||||||| || |  || |||| |||||| ||||||||||| |||||||||||||    
T  17400 aactagttacaaacccgtgcttcgcacgggttgaataacgtattttttaaaaatttaatttc-gaaggagaaattttataaattacggaaaattgttgtc 17498  T
Q  349 ctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||| ||| |||||||||||  |||||||||||||||    
T  17499 ctttatcaatatgaaaatcaaaactgcgtaaaccaaaat 17537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 387
Target Start/End: Original strand, 2881 - 2981
Alignment:
Q  287 tgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaa 386  Q
    ||||||||||  |||||||||||| |||  | |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  2881 tgtattttttttaaaatttagctctgaaagaaaaatcttataaattacagaaaattgttgtcttttataaatgtgaaaatcaaagctgcgtaaatcaaaa 2980  T
Q  387 t 387  Q
    |    
T  2981 t 2981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 15005 - 14917
Alignment:
Q  299 aaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatcaaaggtgcgtaaaccaaaat 387  Q
    |||||||||||  |||||||||||||||||||||||  |||||| ||  |||||||||||||||||||||||| |||||||||||||||    
T  15005 aaaatttagcttcgaagaagaaatcttataaattacgaaaaattatttacctttataaatgtgaaaatcaaagttgcgtaaaccaaaat 14917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 26046 - 26163
Alignment:
Q  269 ttcgcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtgaaaatca 368  Q
    ||||||||| || ||||| |||||||||||||| ||||| || |||  |||||||||||||||||  ||||||||||||| ||||| |||||||||||||    
T  26046 ttcgcacggattaaataacgtattttttaaaaa-tttagttccgaatgagaaatcttataaattatggaaaattgttgtcttttatcaatgtgaaaatca 26144  T
Q  369 aaggtgcgtaaaccaaaat 387  Q
    ||  ||||||||| |||||    
T  26145 aaactgcgtaaactaaaat 26163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 4207 - 4295
Alignment:
Q  272 gcacgggttgaataatgtattttttaaaaaatttagctcagaagaagaaatcttataaattacagaaaattgttgtcctttataaatgtg 361  Q
    |||||||||| |||| ||||||||| |||| ||||  || |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  4207 gcacgggttgtataacgtatttttttaaaa-tttaattctgaaggagaaatcttataaattacggaaaattgttgtcctttataaatgtg 4295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 205823 - 205911
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||| ||||||||||||| ||| ||  | |||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  205823 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 210793 - 210881
Alignment:
Q  73 atagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||  |||| ||||||||||||| ||| ||  | |||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  210793 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaag 210881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 518 - 609
Alignment:
Q  70 catatagtttaaagacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||| ||||  ||||||||||||| ||| ||  ||||||||||||||||| | |||||||||  |||| ||||||||||||||||    
T  518 catatagtttagagactgttttgttcgatttgaaagaggcaagaccattttcgtgagctcgtcaaaatgcgaggatcaaaagtgtaattaag 609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 371
Target Start/End: Original strand, 8778 - 8818
Alignment:
Q  331 ttacagaaaattgttgtcctttataaatgtgaaaatcaaag 371  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8778 ttacagaaaattgttgtcctttataaatgtgaaaatcaaag 8818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 12995 - 12940
Alignment:
Q  251 ctagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattta 306  Q
    ||||||| ||| ||||| |||||||||||||||| | ||| |||||||||||||||    
T  12995 ctagttacaaacctgtgcttcgcacgggttgaattacgtaatttttaaaaaattta 12940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 24917 - 24974
Alignment:
Q  248 aaactagttaaaaatctgtgtttcgcacgggttgaataatgtattttttaaaaaattt 305  Q
    |||||||||| ||| | ||| |||||||||||||||||| |||| || ||||||||||    
T  24917 aaactagttacaaacccgtgcttcgcacgggttgaataacgtatcttgtaaaaaattt 24974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 43724 - 43773
Alignment:
Q  247 aaaactagttaaaaatctgtgtttcgcacgggttgaataatgtatttttt 296  Q
    |||||||||||||||  |||| |||||||| |||||||| ||||||||||    
T  43724 aaaactagttaaaaacttgtgcttcgcacgagttgaatagtgtatttttt 43773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 78478 - 78417
Alignment:
Q  1 actaaaactgtcatttttgtgcatttatgaagttggaaatagggatatagaactaaaactgc 62  Q
    ||||||| |||||||| | ||||||| || |||||||||||| || |||| |||||||||||    
T  78478 actaaaattgtcatttctatgcatttctggagttggaaatagagagataggactaaaactgc 78417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 159348 - 159425
Alignment:
Q  84 acgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 161  Q
    ||||||||||||||||| ||| ||| | |||||||||||||||  ||| ||||||| ||||  ||| ||| |||||||    
T  159348 acgattttgttcgatttgaaagagacatgaccattttcgtgagccggtaaaaatggaaggattaaatgtgcaattaag 159425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University