View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6533_low_55 (Length: 271)
Name: NF6533_low_55
Description: NF6533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6533_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 21395850 - 21396113
Alignment:
| Q |
1 |
attttatttgccagcttaaccacatgctaatgttctgagatccgaccatttcggtcataataaatttcttgtctttattatttgattttccttatctgaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21395850 |
attttatttgccagcttaaccacatgctaatgttctgagatccgaccatttcggtcataataaatttcttgtctttattatttgattttccttatctgaa |
21395949 |
T |
|
| Q |
101 |
aattgcttttacaagtacaaacatttttatctttatgtgcctaaaatccaatcttcatgacttcaatcacgttattttgttttatgtatacttttttccc |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21395950 |
aattgcttttacaagtacaaacatttttatctttacgtgcctaaaatccaatcttcatgacttcaatcacgttattttgttttatgtatacttttttccc |
21396049 |
T |
|
| Q |
201 |
ttgttattgatagatttagattgttttatgtatagtttgatttaaacttcttccctttcatttc |
264 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
21396050 |
ttgttattgataaatttagattgttttatgtatagtttgatttaaacctcttccctttcatttc |
21396113 |
T |
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