View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6533_low_61 (Length: 254)
Name: NF6533_low_61
Description: NF6533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6533_low_61 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 1234237 - 1234325
Alignment:
| Q |
166 |
catttacaattcatatttgttggaaaattgcacgcacctctttcatgtctatttagacctagacacacattttctataaagtatgtctt |
254 |
Q |
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| T |
1234237 |
catttacaattcatatttgttggaaaattgcacgcacctctttcatgtctacttagacctagacacacattttctataaagtatgtctt |
1234325 |
T |
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