View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6534_high_34 (Length: 222)
Name: NF6534_high_34
Description: NF6534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6534_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 8999165 - 8998971
Alignment:
| Q |
13 |
aatattaattagagggtactattaaacatatatatgttgttaatattccatcaaaaattaaaaatcattattcattttctgnnnnnnntttcttttacaa |
112 |
Q |
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| T |
8999165 |
aatattaattagagggtactattaaacatatatatgttgttaatattccattaaaaattaaaaatcattattcattttttgacaattttttcttttacaa |
8999066 |
T |
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| Q |
113 |
atgtgttattttttgttagnnnnnnnnnctttcacaaatgtgtaatttattgtaaagaggagggagtaaattatgtaaaagaacaacgtgctaga |
207 |
Q |
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| T |
8999065 |
atgtgttattttttggtagtttttttttctttcacaaatgtgtaatttattgtaaagaggagggagtaaattatataaaagaacaacgtggtaga |
8998971 |
T |
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