View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6534_low_33 (Length: 228)

Name: NF6534_low_33
Description: NF6534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6534_low_33
NF6534_low_33
[»] chr5 (39 HSPs)
chr5 (1-228)||(20222874-20223102)
chr5 (133-199)||(23247441-23247507)
chr5 (128-193)||(42861314-42861379)
chr5 (133-205)||(35813082-35813154)
chr5 (128-199)||(5732010-5732081)
chr5 (128-199)||(9812818-9812889)
chr5 (128-199)||(12704960-12705031)
chr5 (128-199)||(20525784-20525855)
chr5 (128-199)||(26077087-26077158)
chr5 (128-199)||(41163549-41163620)
chr5 (128-198)||(6767142-6767212)
chr5 (134-199)||(1898953-1899018)
chr5 (128-197)||(4016347-4016416)
chr5 (145-197)||(14588709-14588761)
chr5 (146-205)||(8513483-8513542)
chr5 (136-199)||(25417273-25417336)
chr5 (128-199)||(28856923-28856994)
chr5 (128-199)||(28857074-28857145)
chr5 (133-199)||(7308454-7308520)
chr5 (128-198)||(12766077-12766147)
chr5 (132-198)||(14152000-14152066)
chr5 (128-198)||(35403603-35403673)
chr5 (128-198)||(37263187-37263257)
chr5 (128-205)||(2485143-2485220)
chr5 (128-185)||(39728333-39728390)
chr5 (128-200)||(3654001-3654073)
chr5 (137-197)||(16755016-16755076)
chr5 (133-197)||(24498934-24498998)
chr5 (128-199)||(1538377-1538448)
chr5 (128-199)||(7866527-7866598)
chr5 (128-199)||(18136370-18136441)
chr5 (128-199)||(19572670-19572741)
chr5 (128-199)||(38297054-38297125)
chr5 (128-199)||(42086273-42086344)
chr5 (129-172)||(42292140-42292183)
chr5 (128-197)||(20682709-20682779)
chr5 (128-174)||(23383594-23383640)
chr5 (128-206)||(30349525-30349603)
chr5 (146-199)||(30995085-30995138)
[»] chr6 (21 HSPs)
chr6 (133-199)||(9147255-9147321)
chr6 (128-199)||(3030708-3030779)
chr6 (128-199)||(9179826-9179897)
chr6 (128-199)||(8612064-8612135)
chr6 (128-200)||(17114986-17115058)
chr6 (128-200)||(21016840-21016912)
chr6 (128-199)||(5253313-5253384)
chr6 (128-199)||(21898597-21898668)
chr6 (128-199)||(24671956-24672027)
chr6 (128-198)||(15643920-15643989)
chr6 (133-198)||(34954710-34954774)
chr6 (137-197)||(13036096-13036156)
chr6 (128-199)||(5759577-5759648)
chr6 (128-199)||(6600714-6600784)
chr6 (128-199)||(14107448-14107519)
chr6 (128-175)||(19230671-19230718)
chr6 (128-198)||(2271392-2271462)
chr6 (128-198)||(6606188-6606258)
chr6 (128-174)||(19089447-19089493)
chr6 (128-197)||(29333230-29333299)
chr6 (137-197)||(26476455-26476515)
[»] chr3 (35 HSPs)
chr3 (128-198)||(46529962-46530032)
chr3 (128-200)||(54261171-54261243)
chr3 (128-206)||(48341965-48342043)
chr3 (129-199)||(10043096-10043166)
chr3 (128-197)||(29127864-29127933)
chr3 (128-199)||(35315901-35315972)
chr3 (128-198)||(10040502-10040572)
chr3 (134-199)||(7613017-7613082)
chr3 (128-197)||(15320131-15320200)
chr3 (137-197)||(30767340-30767400)
chr3 (128-176)||(32873662-32873710)
chr3 (133-185)||(33560810-33560862)
chr3 (128-199)||(26207892-26207963)
chr3 (128-198)||(11687201-11687271)
chr3 (145-199)||(28572302-28572356)
chr3 (128-198)||(35923715-35923785)
chr3 (128-198)||(49543464-49543534)
chr3 (137-198)||(6462366-6462427)
chr3 (128-197)||(45877399-45877468)
chr3 (133-185)||(3136798-3136850)
chr3 (133-185)||(31072828-31072880)
chr3 (128-199)||(29135858-29135929)
chr3 (128-199)||(42412865-42412936)
chr3 (128-199)||(47471777-47471848)
chr3 (128-198)||(25294905-25294975)
chr3 (128-206)||(30045766-30045844)
chr3 (137-199)||(39849026-39849088)
chr3 (148-185)||(928565-928602)
chr3 (128-197)||(7650172-7650241)
chr3 (128-185)||(10855329-10855386)
chr3 (128-173)||(13893871-13893916)
chr3 (133-198)||(30735037-30735102)
chr3 (128-205)||(47749189-47749266)
chr3 (146-199)||(13167534-13167591)
chr3 (128-200)||(55069769-55069841)
[»] chr7 (27 HSPs)
chr7 (128-199)||(22268119-22268190)
chr7 (128-199)||(19914792-19914863)
chr7 (140-199)||(21530708-21530767)
chr7 (128-199)||(22993457-22993528)
chr7 (128-199)||(43925460-43925531)
chr7 (128-199)||(47341824-47341895)
chr7 (128-198)||(3353373-3353443)
chr7 (133-198)||(9685692-9685757)
chr7 (138-206)||(18785627-18785695)
chr7 (128-199)||(13095806-13095877)
chr7 (128-199)||(48804631-48804702)
chr7 (128-206)||(8734769-8734847)
chr7 (128-198)||(34659174-34659244)
chr7 (128-197)||(14650265-14650334)
chr7 (133-197)||(24969416-24969480)
chr7 (128-199)||(34127710-34127781)
chr7 (128-199)||(43862062-43862133)
chr7 (137-199)||(1797417-1797479)
chr7 (145-199)||(10047966-10048020)
chr7 (133-199)||(42032049-42032115)
chr7 (128-198)||(43346870-43346940)
chr7 (133-186)||(23658133-23658185)
chr7 (128-185)||(27028227-27028284)
chr7 (128-185)||(39420786-39420843)
chr7 (133-197)||(5069907-5069971)
chr7 (138-198)||(16802081-16802141)
chr7 (133-185)||(46414628-46414680)
[»] chr4 (30 HSPs)
chr4 (128-199)||(52950032-52950103)
chr4 (133-185)||(5472952-5473004)
chr4 (128-199)||(1940864-1940935)
chr4 (128-199)||(6779161-6779232)
chr4 (128-199)||(24166400-24166471)
chr4 (128-199)||(53599010-53599081)
chr4 (128-185)||(2559257-2559314)
chr4 (133-198)||(13552069-13552134)
chr4 (128-197)||(33647671-33647740)
chr4 (128-184)||(14567201-14567257)
chr4 (140-200)||(15840023-15840083)
chr4 (128-196)||(34667695-34667763)
chr4 (147-199)||(36145305-36145357)
chr4 (128-199)||(1446776-1446847)
chr4 (128-199)||(29895737-29895808)
chr4 (128-199)||(38165977-38166048)
chr4 (128-199)||(47078408-47078479)
chr4 (128-199)||(55920984-55921055)
chr4 (128-185)||(3574550-3574607)
chr4 (137-185)||(6032744-6032792)
chr4 (137-185)||(20421733-20421781)
chr4 (128-199)||(7000474-7000545)
chr4 (128-199)||(13073488-13073559)
chr4 (128-199)||(27531747-27531818)
chr4 (128-199)||(31588634-31588705)
chr4 (128-195)||(41339489-41339556)
chr4 (128-206)||(8888972-8889050)
chr4 (128-198)||(26480040-26480110)
chr4 (137-199)||(29588695-29588757)
chr4 (148-200)||(38168227-38168279)
[»] chr2 (31 HSPs)
chr2 (128-199)||(38005347-38005418)
chr2 (22-75)||(25330077-25330130)
chr2 (145-206)||(25540487-25540548)
chr2 (128-197)||(29422160-29422229)
chr2 (128-199)||(2550813-2550884)
chr2 (128-199)||(8410076-8410147)
chr2 (128-197)||(19976899-19976968)
chr2 (128-185)||(33005697-33005754)
chr2 (128-197)||(34356151-34356220)
chr2 (128-197)||(38962708-38962777)
chr2 (130-199)||(39806975-39807044)
chr2 (128-200)||(7747219-7747291)
chr2 (128-199)||(331446-331517)
chr2 (128-199)||(18902620-18902691)
chr2 (128-199)||(22593080-22593151)
chr2 (133-199)||(21286394-21286460)
chr2 (136-198)||(25549681-25549743)
chr2 (151-197)||(34346379-34346425)
chr2 (145-199)||(41220597-41220651)
chr2 (128-185)||(9360852-9360909)
chr2 (137-197)||(7787010-7787070)
chr2 (128-176)||(21180427-21180475)
chr2 (128-176)||(41032018-41032066)
chr2 (128-175)||(2528455-2528502)
chr2 (128-199)||(11069823-11069894)
chr2 (128-199)||(23500772-23500842)
chr2 (128-198)||(14169700-14169770)
chr2 (128-185)||(2149299-2149356)
chr2 (128-185)||(3643991-3644048)
chr2 (128-185)||(14853471-14853528)
chr2 (133-185)||(6358255-6358307)
[»] chr8 (26 HSPs)
chr8 (128-199)||(6100421-6100492)
chr8 (128-199)||(43027254-43027325)
chr8 (128-200)||(10927555-10927627)
chr8 (133-197)||(33401891-33401955)
chr8 (128-199)||(14666161-14666232)
chr8 (128-199)||(15884645-15884716)
chr8 (128-199)||(34846763-34846833)
chr8 (128-199)||(38922504-38922575)
chr8 (128-206)||(44893361-44893439)
chr8 (128-197)||(3418605-3418674)
chr8 (128-199)||(45521118-45521189)
chr8 (128-198)||(13085473-13085543)
chr8 (128-197)||(2467210-2467279)
chr8 (128-197)||(9395910-9395979)
chr8 (128-205)||(22810029-22810106)
chr8 (128-199)||(1013067-1013138)
chr8 (128-199)||(24837191-24837262)
chr8 (128-199)||(34613868-34613939)
chr8 (140-186)||(7673757-7673803)
chr8 (128-198)||(14846525-14846595)
chr8 (137-199)||(17981399-17981461)
chr8 (128-197)||(6940507-6940576)
chr8 (128-197)||(8141051-8141120)
chr8 (150-199)||(11785887-11785936)
chr8 (137-174)||(35496369-35496406)
chr8 (128-172)||(18091350-18091394)
[»] chr1 (33 HSPs)
chr1 (133-206)||(892381-892454)
chr1 (128-199)||(15238197-15238268)
chr1 (128-199)||(18915813-18915884)
chr1 (148-199)||(34719742-34719793)
chr1 (133-199)||(32822-32888)
chr1 (136-197)||(30927820-30927881)
chr1 (146-198)||(17358563-17358615)
chr1 (139-199)||(26325769-26325829)
chr1 (128-208)||(33418197-33418277)
chr1 (128-199)||(5855468-5855539)
chr1 (128-199)||(8763937-8764008)
chr1 (128-199)||(41663947-41664018)
chr1 (128-199)||(51437415-51437486)
chr1 (128-206)||(12036828-12036906)
chr1 (136-198)||(45361974-45362036)
chr1 (146-199)||(34334386-34334439)
chr1 (128-197)||(48798163-48798232)
chr1 (146-199)||(50503452-50503505)
chr1 (133-185)||(10173076-10173128)
chr1 (133-205)||(47312983-47313055)
chr1 (128-199)||(2981022-2981093)
chr1 (147-198)||(5063935-5063986)
chr1 (140-199)||(9659269-9659328)
chr1 (128-199)||(17642095-17642166)
chr1 (128-199)||(49078060-49078131)
chr1 (133-199)||(1764280-1764346)
chr1 (128-198)||(5503977-5504047)
chr1 (137-199)||(43959912-43959974)
chr1 (128-197)||(10422734-10422803)
chr1 (128-197)||(31152662-31152731)
chr1 (137-205)||(9853362-9853430)
chr1 (133-173)||(32151039-32151079)
chr1 (128-200)||(34877936-34878008)
[»] scaffold0006 (1 HSPs)
scaffold0006 (128-199)||(68465-68536)
[»] scaffold0005 (2 HSPs)
scaffold0005 (128-184)||(250118-250174)
scaffold0005 (147-199)||(271164-271216)
[»] scaffold0384 (1 HSPs)
scaffold0384 (146-197)||(5939-5990)
[»] scaffold0029 (1 HSPs)
scaffold0029 (128-198)||(40992-41062)
[»] scaffold0002 (2 HSPs)
scaffold0002 (128-198)||(518-588)
scaffold0002 (146-199)||(139397-139454)
[»] scaffold0332 (1 HSPs)
scaffold0332 (133-197)||(15284-15348)
[»] scaffold0009 (1 HSPs)
scaffold0009 (151-199)||(9407-9455)
[»] scaffold0016 (1 HSPs)
scaffold0016 (128-174)||(8825-8871)


Alignment Details
Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 20222874 - 20223102
Alignment:
Q  1 tcatcaacatcacattcattgtcactcatgaaatattactgcctcaagtagagtaattcttcactaccatgattataca--ttttttcttttggaatagc 98  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  20222874 tcatcaacataacattcattgtcactcatgaaatattactgcctcaagtagagtaattcttcactaccatgattatacatttttttttttttggaatagc 20222973  T
Q  99 atggtcaagcnnnnnnnnnnnnnnnnnnnccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    ||||||||||                   ||||||| ||||| ||| ||||||||||||||| || ||| |||||| ||||||||||| |||||||||||    
T  20222974 atggtcaagc-aaaacaaaaacaaaaaaaccaaattatttggactgtagtggcaaggagctccttccaaagacgtatctggggaatatcgggttcgattc 20223072  T
Q  199 cttggggggaacattgaccggtgagcatgc 228  Q
    | |||||||||||||| || |||| |||||    
T  20223073 cctggggggaacattggccagtgaacatgc 20223102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 23247507 - 23247441
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||| || |||| |||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  23247507 ttgtttggacttcagtagcaaggagctcattccaaggacgtacctggggaatatcgggttcgattcc 23247441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 42861379 - 42861314
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttc 193  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| || | ||||||||| ||||||    
T  42861379 ccaaattgtttgggctccagtggcaaggagctcattccaaggacatatccggggaatatcgggttc 42861314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 35813154 - 35813082
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg 205  Q
    ||||||||||||| |||||||| |||||||| |||||||||||| | ||||||  ||||||||||||| ||||    
T  35813154 ttgtttgggctgcggtggcaagaagctcattccaaggacgtacccgaggaataccgggttcgattcctagggg 35813082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 5732081 - 5732010
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  5732081 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 5732010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 9812818 - 9812889
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||| || |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  9812818 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 9812889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 12704960 - 12705031
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||| || |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  12704960 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 12705031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 20525784 - 20525855
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| ||||||||| ||| | ||||||||| ||||||||||||    
T  20525784 ccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcc 20525855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 26077087 - 26077158
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||| |||||||||||| ||||||||||  ||||||||| | |||||||||||    
T  26077087 ccaagttgtttgggctccagtggtaaggagctcattccaaggacgtatttggggaatactaggttcgattcc 26077158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 41163620 - 41163549
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||||||||| || |||| ||||||| ||||||||  ||||||||||||    
T  41163620 ccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcc 41163549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 6767212 - 6767142
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||| ||||||||  |||||||||||    
T  6767212 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 6767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 1898953 - 1899018
Alignment:
Q  134 tgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||| |||||||||||||||| || |||||| ||||| ||||||||  ||||||||||||    
T  1898953 tgtttgggctacagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcc 1899018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 4016416 - 4016347
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| |||| |||||| |||||||||| |||||||| |||||||||||||| | ||||| ||||||||||    
T  4016416 ccaagttgtatgggctccagtggcaagaagctcattccaaggacgtacctgagaaatatcgggttcgatt 4016347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 14588761 - 14588709
Alignment:
Q  145 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||||||||||||||  ||||||||||||| ||||||||||| ||||||||||    
T  14588761 cagtggcaaggagcttctttcaaggacgtatctggggaatatcgggttcgatt 14588709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 8513483 - 8513542
Alignment:
Q  146 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg 205  Q
    ||||||||||||||| || |||||||||||| ||||||||  ||||||||||||| ||||    
T  8513483 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcctagggg 8513542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 25417336 - 25417273
Alignment:
Q  136 tttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||| |||||||||||||||| || |||||||||||  ||||||||  ||||||||||||    
T  25417336 tttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcc 25417273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 28856923 - 28856994
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||| ||| ||||||||  ||||||||||||    
T  28856923 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcc 28856994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 28857074 - 28857145
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||| ||| ||||||||  ||||||||||||    
T  28857074 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcc 28857145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 7308520 - 7308454
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||||| |  |||||||||||||||||| ||||||||||  || ||||||| ||||||||||||    
T  7308520 ttgtttgggttctagtggcaaggagctcattccaaggacgtatttgaggaatatcgggttcgattcc 7308454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 12766077 - 12766147
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| |||||||| ||  ||||||||||||||| || |||||||||||| ||||||||  |||||||||||    
T  12766077 ccaagttgtttggactcgagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 12766147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 14152000 - 14152066
Alignment:
Q  132 attgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    ||||||| |||| |||||||||||||||| || ||| || ||||||||||||||  |||||||||||    
T  14152000 attgtttcggctccagtggcaaggagctccttccaatgatgtacctggggaataccgggttcgattc 14152066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 35403673 - 35403603
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||  ||| ||||  |||||||||||    
T  35403673 ccaacttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattc 35403603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 37263187 - 37263257
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||| ||||||| ||||||||||||| || ||  ||||||||||| ||||||||| |||||||||||    
T  37263187 ccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattc 37263257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 2485143 - 2485220
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg 205  Q
    |||| |||||||| || || |||||||||||||||| ||||||||||    ||||||| |||||||||||||| ||||    
T  2485143 ccaagttgtttggactccaatggcaaggagctcattccaaggacgtattcagggaatactgggttcgattcctagggg 2485220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 39728333 - 39728390
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||| ||||||||||| |||||||||||||||| || |||| ||||||| ||||||||    
T  39728333 ccaagttgtttgggctccagtggcaaggagctctttccaagaacgtacccggggaata 39728390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 3654073 - 3654001
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 200  Q
    |||| ||||||||||| ||||| ||| |||||| || |||||||||||| || |||||  |||||||||||||    
T  3654073 ccaagttgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggttcgattcct 3654001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 16755016 - 16755076
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||||| |||||||||||||||| || ||| |||||| | |||||||| |||||||||||    
T  16755016 ttgggcttcagtggcaaggagctctttccaaagacgtatccggggaatactgggttcgatt 16755076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 24498934 - 24498998
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||||||||||  ||| ||||||||||| || |||||||||| |||| |||||| ||||||||||    
T  24498934 ttgtttgggctctagtagcaaggagctccttccaaggacgtatctggagaatatcgggttcgatt 24498998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 1538377 - 1538448
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||||||||| || | ||||||||   ||||||||  ||||||||||||    
T  1538377 ccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcc 1538448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 7866527 - 7866598
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| |||| || |||||||||||||||| || |||||||||||| | ||||||  ||||||||||||    
T  7866527 ccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcc 7866598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 18136441 - 18136370
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||||||||| || ||| |||||| | || |||||  ||||||||||||    
T  18136441 ccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcc 18136370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 19572670 - 19572741
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||| ||||||    
T  19572670 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcc 19572741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 38297125 - 38297054
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||||||||| |||||||||||||||| ||  ||||| |||| || ||||||  |||||| |||||    
T  38297125 ccaaattgtttgggctccagtggcaaggagctccttctaaggatgtacttgaggaataccgggttcaattcc 38297054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 42086273 - 42086344
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| | |||||||||||||| || |||||||||||| | ||||||  ||||||||||||    
T  42086273 ccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcc 42086344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 42292183 - 42292140
Alignment:
Q  129 caaattgtttgggctgcagtggcaaggagctcatttcaaggacg 172  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||    
T  42292183 caaattgtttgggctccagtggcaaggagctcattccaaagacg 42292140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 20682779 - 20682709
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttc-aaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||| ||||||| ||||| ||||||||||  ||| ||||||||||| ||||||||||||||| ||||    
T  20682779 ccaagttgcttgggctccagtgacaaggagctccattctaaggacgtacccggggaatattgggttagatt 20682709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 23383594 - 23383640
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgta 174  Q
    |||| ||||||||||| |||||||||||||||| || ||||||||||    
T  23383594 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 23383640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 30349525 - 30349603
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 206  Q
    |||| ||||||||||| ||||||||||||| || || |||||||||| | ||||||||  ||||| |||| || |||||    
T  30349525 ccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctaggggg 30349603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 30995085 - 30995138
Alignment:
Q  146 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||||||||||| || ||||||||||| |||||||||   |||||||||||    
T  30995085 agtggcaaggagctccttccaaggacgtacatggggaataccaggttcgattcc 30995138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 9147255 - 9147321
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||||||| |||||| |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  9147255 ttgtttgggctccagtgggaaggagctcattccaaggacgtacctggggaatatcgggttcgattcc 9147321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 3030779 - 3030708
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  3030779 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtatttcgggaatatcgggttcgattcc 3030708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 9179897 - 9179826
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||  |||||||  ||||||||||||    
T  9179897 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgattcc 9179826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 8612135 - 8612064
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||| || |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  8612135 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 8612064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 17115058 - 17114986
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 200  Q
    |||||||| ||||||| |||||||||| ||||| || ||||||||||| ||| ||||||||  ||||||||||    
T  17115058 ccaaattgcttgggctccagtggcaagaagctccttccaaggacgtacatggagaatattgaattcgattcct 17114986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 21016912 - 21016840
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 200  Q
    |||| ||| ||||||| |||||||||||||||| || || ||||||||| ||||||||  |||||||||||||    
T  21016912 ccaagttgcttgggctccagtggcaaggagctccttccagggacgtacccggggaataccgggttcgattcct 21016840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 5253384 - 5253313
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| || ||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  5253384 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 5253313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 21898597 - 21898668
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||    
T  21898597 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc 21898668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 24672027 - 24671956
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| ||||||||||||| |||| |||||  |||||| |||||    
T  24672027 ccaagttgcttgggctccagtggcaaggagctcctttcaaggacgtatctggagaataccgggttctattcc 24671956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 15643989 - 15643920
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||| || |||||||  |||||||||||    
T  15643989 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatct-gggaataacgggttcgattc 15643920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 34954774 - 34954710
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    ||||||||||| || ||||||||||||| || |||||||||||||||||||||   ||||||||||    
T  34954774 ttgtttgggctcca-tggcaaggagctccttccaaggacgtacctggggaataccaggttcgattc 34954710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 13036156 - 13036096
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||||| |||||||||||||||| || ||||||||||   ||||||||| ||||||||||    
T  13036156 ttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgatt 13036096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 5759577 - 5759648
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||| ||| || |||||||||||| | ||||||| ||||| ||||||    
T  5759577 ccaagttgcttgggctccagtggcaaggaactccttccaaggacgtacccgaggaatatcgggtttgattcc 5759648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 6600784 - 6600714
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||| || ||||||||| ||||||||||||| |||||||| || ||||| | |||||||||||    
T  6600784 ccaagttgtttggacttcagtggcaaagagctcatttcaatgacgtacccggagaatact-ggttcgattcc 6600714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 14107519 - 14107448
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||||||||| || ||| ||||||   ||||||||  ||||||||||||    
T  14107519 ccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcc 14107448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 19230718 - 19230671
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtac 175  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||    
T  19230718 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtac 19230671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 2271462 - 2271392
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||| ||||||| |||||||||||||||| || ||||||||||   ||||||||  |||||||||||    
T  2271462 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattc 2271392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 6606258 - 6606188
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||| ||||||  |||||||||||||||| || |||||||||| | ||||||||  |||||||||||    
T  6606258 ccaagttgcttgggccacagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 6606188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 19089447 - 19089493
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgta 174  Q
    |||| ||| ||||||| |||| |||||||||||||||||||||||||    
T  19089447 ccaagttgcttgggctccagtcgcaaggagctcatttcaaggacgta 19089493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 29333299 - 29333230
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| |||||||||||  |||||||| |||||| || ||||||||||||  |||||||  ||||||||||    
T  29333299 ccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgatt 29333230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 26476515 - 26476455
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||||| |||| || |||||||| || ||||||||||||||| |||||| |||| |||||    
T  26476515 ttgggcttcagttgcgaggagctccttccaaggacgtacctggagaatatcgggtacgatt 26476455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 46530032 - 46529962
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  46530032 ccaagttgtttgggctccagtggcaaggagctcctttcaaggacgtacctggggaataccgggttcgattc 46529962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 54261171 - 54261243
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 200  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||||||||||||  |||||||||||||    
T  54261171 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcct 54261243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 48341965 - 48342043
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 206  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||||||||||||  |||||| |||||| |||||    
T  48341965 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttctattcctaggggg 48342043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 10043096 - 10043166
Alignment:
Q  129 caaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||||||||||| || |||||| |||||| ||||||||||||| | ||||||||| ||||||||||||    
T  10043096 caaattgtttgggctccactggcaatgagctcctttcaaggacgtatccggggaatatcgggttcgattcc 10043166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 29127864 - 29127933
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||||||||||| ||||||||||||| || || |||||||||| ||||||||||| ||||||||||    
T  29127864 ccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatt 29127933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 35315901 - 35315972
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| ||||||||| |||||| || |||||||||||| || |||||| ||||||||||||    
T  35315901 ccaagttgtttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcc 35315972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 10040502 - 10040572
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||| ||||||| |||||||||||||||| ||  ||||||||||| ||||||||| |||||||||||    
T  10040502 ccaagttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattc 10040572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 7613082 - 7613017
Alignment:
Q  134 tgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||| || |||||||||||||||| || ||||||||||| |||||||||  ||||||||||||    
T  7613082 tgtttggacttcagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcc 7613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 15320131 - 15320200
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| |||||||| || |||||||||||||||| || |||||||||||| ||||||||  ||||||||||    
T  15320131 ccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 15320200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 30767400 - 30767340
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||||| ||||||||||||| || || |||||| ||||||||||||||| ||||||||||    
T  30767400 ttgggctccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgatt 30767340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 32873710 - 32873662
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacc 176  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  32873710 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacc 32873662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 33560810 - 33560862
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    ||||||||||| |||||||||||||||| || |||||| ||||||||||||||    
T  33560810 ttgtttgggcttcagtggcaaggagctccttccaaggatgtacctggggaata 33560862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 26207963 - 26207892
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||| ||||| ||||||||  ||||||||||||    
T  26207963 ccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcc 26207892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 11687271 - 11687201
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||||||||||| |||||||||| ||||| || ||||||||||||||| |||||  ||||| |||||    
T  11687271 ccaagttgtttgggctccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgattc 11687201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 28572356 - 28572302
Alignment:
Q  145 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||||||||| ||||||| ||| ||| |||||||| |||||||||||||    
T  28572356 cagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcc 28572302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 35923785 - 35923715
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| |||||||||||  |||||||| ||||||||| ||||||||||||||| |||||   ||||||||||    
T  35923785 ccaagttgtttgggctctagtggcaatgagctcattccaaggacgtacctggagaataccaggttcgattc 35923715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 49543464 - 49543534
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||| |  |||||||| |||||||||||    
T  49543464 ccaatttgtttgggctttagtggcaaggagctccttccaaggacgtatcccgggaatatcgggttcgattc 49543534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 6462366 - 6462427
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||||||  ||||||||||||||| || |||||||||| ||||||||||  |||||||||||    
T  6462366 ttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattc 6462427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 45877399 - 45877468
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||||||||||| |||||||||||||| | || |||||||||| | ||||||||  ||||||||||    
T  45877399 ccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatt 45877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 3136850 - 3136798
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    ||||||||||| | |||||||| ||||| ||||||||||||||| ||||||||    
T  3136850 ttgtttgggctcccgtggcaagaagctcctttcaaggacgtacccggggaata 3136798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 31072828 - 31072880
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    ||||||||||| || ||||||||||||| ||||||||||||||| || |||||    
T  31072828 ttgtttgggctccaatggcaaggagctcctttcaaggacgtacccggagaata 31072880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 29135858 - 29135929
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||| ||||||| |||||||||||||||  || |||||||||| | ||||||||  || |||||||||    
T  29135858 ccaaattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcc 29135929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 42412936 - 42412865
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| || ||||||||||||| || |||||||||| | ||||||||  ||||||||||||    
T  42412936 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc 42412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 47471777 - 47471848
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| |||||||  |||||||| |||||| || ||||||||||||| |||||||  ||||||||||||    
T  47471777 ccaagttgcttgggctctagtggcaaagagctccttccaaggacgtacctagggaataccgggttcgattcc 47471848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 25294905 - 25294975
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||| |||||    
T  25294905 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattc 25294975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 30045766 - 30045844
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 206  Q
    |||| ||| |||||||  |||||||| |||||| ||| ||| |||||| |||||||||  ||||||||||||| |||||    
T  30045766 ccaagttgcttgggctcaagtggcaatgagctccttttaagaacgtacatggggaataccgggttcgattcctaggggg 30045844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 39849026 - 39849088
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||| |||||||||||||||| || |||||||||||   |||||| | ||||||||||||    
T  39849026 ttgggctccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattcc 39849088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 928565 - 928602
Alignment:
Q  148 tggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  928565 tggcaaggagctcattccaaggacgtacctagggaata 928602  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 7650172 - 7650241
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||||||||| | ||||||||||||| || ||||||||| |||| | |||||||  ||||||||||    
T  7650172 ccaagttgtttgggttccagtggcaaggagttcctttcaaggatgtacttagggaataccgggttcgatt 7650241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 10855329 - 10855386
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||| ||||||||||| |||||||||||||||| || |||||| |||| |||| ||||    
T  10855329 ccaagttgtttgggctccagtggcaaggagctccttccaaggatgtacttgggaaata 10855386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 13893871 - 13893916
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgt 173  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||    
T  13893871 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgt 13893916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 30735102 - 30735037
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||||||||||  |||||||||||||||||| |||||||| ||  ||||||||  | |||||||||    
T  30735102 ttgtttgggctctagtggcaaggagctcattccaaggacgcactcggggaataccgagttcgattc 30735037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 47749266 - 47749189
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg 205  Q
    |||||||||||||||| |||||| || |||||  || |||||||||| |  |||||||  ||||||||||||| ||||    
T  47749266 ccaaattgtttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattcctagggg 47749189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 13167591 - 13167534
Alignment:
Q  146 agtggcaaggagctcatttcaaggacgtac----ctggggaatattgggttcgattcc 199  Q
    ||||||||||||||| || |||||||||||    ||||||||||| ||||||||||||    
T  13167591 agtggcaaggagctccttccaaggacgtacgtatctggggaatatcgggttcgattcc 13167534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 55069841 - 55069769
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 200  Q
    |||| ||||||||||| ||||| ||| |||||| |||||||||||||    ||||||| |||||| |||||||    
T  55069841 ccaagttgtttgggctccagtgacaatgagctcttttcaaggacgtattcagggaatactgggtttgattcct 55069769  T

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Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 22268190 - 22268119
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||    
T  22268190 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcc 22268119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 19914863 - 19914792
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||||  |||||| |||||||||||||    
T  19914863 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctaaggaatactgggttcgattcc 19914792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 21530708 - 21530767
Alignment:
Q  140 ggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||||||||||| || ||||||||||||||||||||| |||||| ||||||    
T  21530708 ggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcc 21530767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 22993528 - 22993457
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| |||| || |||||||||||||||| || |||||||||||| ||||||||| ||||||||||||    
T  22993528 ccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattcc 22993457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 43925460 - 43925531
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  43925460 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 43925531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 47341824 - 47341895
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||||| ||||||||  | ||||||||||    
T  47341824 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcc 47341895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 3353373 - 3353443
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||||||| |||| ||||||||||||||||||||||  ||||||||| || |||||||| ||| |||||||    
T  3353373 ccaaattgcttggcctgcagtggcaaggagctcattataaggacgtatctagggaatatcgggatcgattc 3353443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 9685692 - 9685757
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    ||||||||||| |||||||||||||||| || |||| ||||| | ||||||||| |||||||||||    
T  9685692 ttgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattc 9685757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 18785627 - 18785695
Alignment:
Q  138 tgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 206  Q
    |||||| |||||||||| ||||| || |||||||||||| ||||||||  ||||||||||||| |||||    
T  18785627 tgggctccagtggcaagaagctccttccaaggacgtacccggggaataccgggttcgattcctaggggg 18785695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 13095806 - 13095877
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| | |||||||||||||| ||||||||||||||| ||||||||  |||||| |||||    
T  13095806 ccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcc 13095877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 48804631 - 48804702
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||    
T  48804631 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc 48804702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 8734847 - 8734769
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 206  Q
    |||| ||||||||||  |||||||||||||||| || ||||||| || || ||||||||  ||||||||| ||||||||    
T  8734847 ccaagttgtttgggcgtcagtggcaaggagctccttccaaggacatatctcgggaatatcaggttcgatttcttggggg 8734769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 34659174 - 34659244
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||||||||||| |||||||||||||||| || || ||| ||||| ||||||||  |||||||||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattc 34659244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 14650265 - 14650334
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| |||||||| ||  ||||||||||||||| || |||||||||||| || |||||| ||||||||||    
T  14650265 ccaagttgtttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatt 14650334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 24969480 - 24969416
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||||||||| |||||||||||||||  ||||||||||||| ||||  ||||  ||||||||||    
T  24969480 ttgtttgggctccagtggcaaggagcttttttcaaggacgtatctggaaaataccgggttcgatt 24969416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 34127781 - 34127710
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| || ||||||||| ||| || |||||||||||| ||||||||  ||||||||||||    
T  34127781 ccaagttgcttgggctccaatggcaaggaactccttccaaggacgtacccggggaataccgggttcgattcc 34127710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 43862133 - 43862062
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||||||  || |||||||||||| || ||| |||||| ||||||||||  ||||||||||||    
T  43862133 ccaagttgtttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattcc 43862062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 1797417 - 1797479
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||| |||||||||||||||| || |||||||||| | | ||||||  ||||||||||||    
T  1797417 ttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcc 1797479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 10048020 - 10047966
Alignment:
Q  145 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||    
T  10048020 cagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc 10047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 42032049 - 42032115
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||||||| |||| ||||| ||||| || |||||||||||| ||||||||   |||||||||||    
T  42032049 ttgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcc 42032115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 43346940 - 43346870
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| |||||||| || |||||||||||||||| || ||| |||||| ||||||||||  |||||| ||||    
T  43346940 ccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattc 43346870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 23658133 - 23658185
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatat 186  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||  ||||||||    
T  23658133 ttgtttgggctccagtggcaaggagctc-cttcaaggacgtacccagggaatat 23658185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 27028227 - 27028284
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||| |||||||| || | ||||||||||||||||| |||| ||||||||||| ||||    
T  27028227 ccaagttgtttggactccggtggcaaggagctcattccaagaacgtacctgggaaata 27028284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 39420786 - 39420843
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||| ||| |||||||  ||||||||||||||| ||||||||| ||||| ||||||||    
T  39420786 ccaagttgcttgggctctagtggcaaggagctcctttcaaggaggtacccggggaata 39420843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 5069971 - 5069907
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||||||||| |||||||||||||||  ||  ||||||||||| ||| ||||  ||||||||||    
T  5069971 ttgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatt 5069907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 16802081 - 16802141
Alignment:
Q  138 tgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||||| ||||||||| |||||| || |||||||||||| ||||||||  || ||||||||    
T  16802081 tgggctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattc 16802141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 46414628 - 46414680
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    ||||||||||| | |||||||||||||| ||| ||||||||||| | ||||||    
T  46414628 ttgtttgggctcccgtggcaaggagctccttttaaggacgtacccgtggaata 46414680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 52950032 - 52950103
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  52950032 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgattcc 52950103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 5473004 - 5472952
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  5473004 ttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaata 5472952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 1940935 - 1940864
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||||| ||| ||||| ||||||||||||    
T  1940935 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcc 1940864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 6779161 - 6779232
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||||||||  || ||||||||||||||| |||||  ||||||||||||    
T  6779161 ccaagttgtttgggctccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgattcc 6779232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 24166400 - 24166471
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||  |||||||| |||||||||||||    
T  24166400 ccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcc 24166471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 53599010 - 53599081
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| || ||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  53599010 ccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 53599081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 2559257 - 2559314
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||| ||||||||||| ||||||||| |||||| || |||||||||||||||||||||    
T  2559257 ccaagttgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaata 2559314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 13552069 - 13552134
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    ||||||||||| |||||||||||||||| || |||| ||||| | ||||||||| |||||||||||    
T  13552069 ttgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattc 13552134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 33647671 - 33647740
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||| |||||||  ||||||||||||||| ||||||||||||| ||||||||||  ||||||||||    
T  33647671 ccaagttgcttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatt 33647740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 14567201 - 14567257
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaat 184  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  14567201 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 14567257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 15840083 - 15840023
Alignment:
Q  140 ggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 200  Q
    |||| |||||||||||||||| || ||||||||||| |||||||||  |||||||||||||    
T  15840083 ggctccagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcct 15840023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 34667763 - 34667695
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgat 196  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||||| ||||||||  |||||||||    
T  34667763 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgat 34667695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 36145357 - 36145305
Alignment:
Q  147 gtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||||||||||||| |||||||||||| ||||||||  ||||||||||||    
T  36145357 gtggcaaggagctcattccaaggacgtacccggggaataccgggttcgattcc 36145305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 1446776 - 1446847
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||    
T  1446776 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc 1446847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 29895737 - 29895808
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||    
T  29895737 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc 29895808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 38165977 - 38166048
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| || ||||||||||||| || |||||||||| | |||||||| |||||| ||||||    
T  38165977 ccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcc 38166048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 47078408 - 47078479
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||| | |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  47078408 ccaagttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 47078479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 55920984 - 55921055
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||| ||| ||||||||  ||||||||||||    
T  55920984 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcc 55921055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 3574607 - 3574550
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||| ||| ||||||| |||||||||||||||| || ||||||||||||| |||||||    
T  3574607 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaata 3574550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 6032792 - 6032744
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    ||||||| |||||||||||||||| || |||||||||||| ||||||||    
T  6032792 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaata 6032744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 20421733 - 20421781
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    ||||||| |||||||||||||||| |||||| |||||| ||||||||||    
T  20421733 ttgggcttcagtggcaaggagctcctttcaaagacgtatctggggaata 20421781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 7000474 - 7000545
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||| ||||| || |||||||||||  ||||||||  | ||||||||||    
T  7000474 ccaagttgtttgggctacagtggcaagaagctccttccaaggacgtactcggggaataccgagttcgattcc 7000545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 13073488 - 13073559
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||||||  |||||||| |||||| || ||||||||||||||| |||||  | ||||||||||    
T  13073488 ccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattcc 13073559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 27531818 - 27531747
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| |||| || |||||||||||||||| || ||||||||||||  |||||||  ||||||||||||    
T  27531818 ccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccagggaataccgggttcgattcc 27531747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 31588634 - 31588705
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| ||||| |||||||||| ||  |||||||||   ||||||||||||||| ||||||    
T  31588634 ccaagttgtttgggcttcagtgtcaaggagctcgttctaaggacgtattcggggaatattgggtttgattcc 31588705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 41339556 - 41339489
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcga 195  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||||| || |||||  ||||||||    
T  41339556 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggagaataccgggttcga 41339489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 8888972 - 8889050
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 206  Q
    |||| |||||||||||  || |||||||||||| ||  ||||||||| | ||||||||  ||||||||||||| |||||    
T  8888972 ccaagttgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcctaggggg 8889050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 26480110 - 26480040
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||||||||||| || ||||||||||||| || |||| |||||| |||||||||  | |||||||||    
T  26480110 ccaagttgtttgggctccactggcaaggagctccttccaagtacgtacatggggaataccgagttcgattc 26480040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 29588695 - 29588757
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||| ||||||||||||||||||| ||| ||||| || ||| ||||  ||||||||||||    
T  29588695 ttgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcc 29588757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 38168227 - 38168279
Alignment:
Q  148 tggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 200  Q
    ||||||||||||| || |||||||||||| ||||||||   ||||||||||||    
T  38168227 tggcaaggagctccttccaaggacgtacccggggaataccaggttcgattcct 38168279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 38005347 - 38005418
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||| |||||||| |||||||||||||    
T  38005347 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcc 38005418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 25330077 - 25330130
Alignment:
Q  22 tcactcatgaaatattactgcctcaagtagagtaattcttcactaccatgatta 75  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  25330077 tcactcacgaaatattactgtctcaagtagagtaattcttcactaccatgatta 25330130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 25540548 - 25540487
Alignment:
Q  145 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 206  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| |||||    
T  25540548 cagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctaggggg 25540487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 29422160 - 29422229
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  29422160 ccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatt 29422229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 2550813 - 2550884
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||| ||||||||||||    
T  2550813 ccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcc 2550884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 8410076 - 8410147
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||| || |||||| ||||||||||||    
T  8410076 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcc 8410147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 19976968 - 19976899
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||||||||||||||| |||||||||| ||||| || |||||||||| | ||||||||  ||||||||||    
T  19976968 ccaaattgtttgggctccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgatt 19976899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 33005697 - 33005754
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||||||| ||||||| ||||||||||||||||||||| |||||||||| | ||||||    
T  33005697 ccaaattgcttgggctccagtggcaaggagctcatttctaggacgtacccgtggaata 33005754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 34356151 - 34356220
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||||||||||| |||||||||||||||  || |||||||||| ||||||||||  ||||||||||    
T  34356151 ccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatt 34356220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 38962708 - 38962777
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| |||||||| || |||||| ||||||||||||||||||||||| | ||||||||  ||||||||||    
T  38962708 ccaagttgtttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgatt 38962777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 39807044 - 39806975
Alignment:
Q  130 aaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||||||| ||||||||||  |||| || |||||||||||| ||||||||  ||||||||||||    
T  39807044 aaattgtttgggctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcc 39806975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 7747219 - 7747291
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 200  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  |||||||||||||    
T  7747219 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcct 7747291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 331446 - 331517
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| ||||||||| |||||| || |||||||||||| ||||||||  ||||||||||||    
T  331446 ccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcc 331517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 18902691 - 18902620
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||  ||||||||  ||||||||||||    
T  18902691 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcc 18902620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 22593080 - 22593151
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||| ||| |||||||||||||||| || |||||||||||| |||||||| || ||||||||||    
T  22593080 ccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcc 22593151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 21286394 - 21286460
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||| ||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||||    
T  21286394 ttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcc 21286460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 25549681 - 25549743
Alignment:
Q  136 tttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||||||| |||||||||||||||| || |||| |||||  ||||||||| ||||||||||||    
T  25549681 tttgggctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattc 25549743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 34346425 - 34346379
Alignment:
Q  151 caaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  34346425 caaggagctcattccaaggacgtacctggggaatactgggtttgatt 34346379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 41220597 - 41220651
Alignment:
Q  145 cagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  41220597 cagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 41220651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 9360909 - 9360852
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||||||| ||||||| ||| |||||||| |||||| |||||||||||| ||||||||    
T  9360909 ccaaattgcttgggcttcaggggcaaggatctcattccaaggacgtacccggggaata 9360852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 7787010 - 7787070
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||||| |||||||||||| ||| |||| |||||||||| ||||||||  ||||||||||    
T  7787010 ttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatt 7787070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 21180475 - 21180427
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacc 176  Q
    |||| ||||||||||| |||||||||||||||| || ||||||||||||    
T  21180475 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacc 21180427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 41032066 - 41032018
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacc 176  Q
    |||||||| ||||||| |||||||||||||||| || ||||||||||||    
T  41032066 ccaaattgcttgggctccagtggcaaggagctccttccaaggacgtacc 41032018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 2528502 - 2528455
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtac 175  Q
    |||||||||||||||| ||||||||| |||||| || |||||||||||    
T  2528502 ccaaattgtttgggctccagtggcaatgagctccttccaaggacgtac 2528455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 11069823 - 11069894
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||| |||| || |||| ||||||||||| |||||||||||| ||||||||   |||||||||||    
T  11069823 ccaagttgttttggctccaatggctaggagctcattccaaggacgtacccggggaataccaggttcgattcc 11069894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 23500842 - 23500772
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| | |||||||||||||| || ||| |||||| | ||||||||| ||||||||||||    
T  23500842 ccaagttgtttgggctccggtggcaaggagctccttccaaagacgtatc-ggggaatatcgggttcgattcc 23500772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 14169770 - 14169700
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||||||||||| ||||| ||||||| || || ||||||||||   ||||||||| |||||||||||    
T  14169770 ccaagttgtttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgattc 14169700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 2149356 - 2149299
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||| ||||||||||| |||||||||||| ||  ||||||||| ||| ||||||||||    
T  2149356 ccaagttgtttgggctccagtggcaaggaacttctttcaaggatgtatctggggaata 2149299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 3644048 - 3643991
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||| ||| ||||||| |||||| |||||||||||| |||||||||| | ||||||||    
T  3644048 ccaagttgcttgggctccagtggaaaggagctcattccaaggacgtatccggggaata 3643991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 14853528 - 14853471
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    |||| ||||||||||| |||||||||||| ||| ||||||||| ||| | ||||||||    
T  14853528 ccaagttgtttgggctccagtggcaaggaactcctttcaaggatgtatccggggaata 14853471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 6358307 - 6358255
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    ||||||||||| |||||||||| ||||||||  ||||||||| | ||||||||    
T  6358307 ttgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaata 6358255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 6100421 - 6100492
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||||| | ||||||||  ||||||||||||    
T  6100421 ccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcc 6100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 43027254 - 43027325
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| ||||||||| |||||||||||||| |||||  ||||||||| |||||||||||||    
T  43027254 ccaagttgtttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggttcgattcc 43027325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 10927555 - 10927627
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 200  Q
    |||| ||| ||||||| |||||||||||||||  ||||||||||||||| ||||||||  |||||||||||||    
T  10927555 ccaagttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattcct 10927627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 33401955 - 33401891
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||||||||| |||||||||||||||| ||||||||||||||  ||||||||  ||||||||||    
T  33401955 ttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgatt 33401891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 14666232 - 14666161
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||| | ||||||||  ||||||||||||    
T  14666232 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcc 14666161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 15884716 - 15884645
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||| ||||||||| || |||||||||||||||||||||  ||||||||||||    
T  15884716 ccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcc 15884645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 34846763 - 34846833
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||  |||||||  ||||||||||||    
T  34846763 ccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacc-cgggaataccgggttcgattcc 34846833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 38922575 - 38922504
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||||| ||||||||  ||||||||||||    
T  38922575 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcc 38922504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 44893439 - 44893361
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 206  Q
    |||| ||||||||||| |||||||||||||||| || |||||||||||| ||||||||  |||||| ||| || |||||    
T  44893439 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctaggggg 44893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 3418674 - 3418605
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| |||||||| || | |||||||||||||| || |||||||||| ||||||||||| ||||||||||    
T  3418674 ccaagttgtttggactcccgtggcaaggagctccttccaaggacgtatctggggaatatcgggttcgatt 3418605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 45521118 - 45521189
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| ||||||||||||| ||||| |||||| ||||| ||||||||  ||||||||||||    
T  45521118 ccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcc 45521189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 13085473 - 13085543
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||||||||||| ||||||| |||||||| || |||||||||| | ||||||||  |||||||||||    
T  13085473 ccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattc 13085543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 2467279 - 2467210
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||| ||||||| |||||||||||||||| || |||||||||| | ||||||||  ||||||||||    
T  2467279 ccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 2467210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 9395979 - 9395910
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||| |||| || ||||||||| |||||||||||||||| ||| ||||||||||| || |||||||    
T  9395979 ccaagttgcttggactccagtggcaatgagctcatttcaaggatgtatctggggaatatcggattcgatt 9395910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 22810029 - 22810106
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg 205  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||| | || ||| || |||||||||||| |||||    
T  22810029 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtatccggagaacatcgggttcgattccctgggg 22810106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 1013138 - 1013067
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||  || |||||||||| | ||||||||  ||||||||||||    
T  1013138 ccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcc 1013067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 24837191 - 24837262
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| || |||| ||||||| ||||||||  | ||||||||||    
T  24837191 ccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcc 24837262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 34613939 - 34613868
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||||||||| ||||||||| |||||| || |||   |||| | ||||||||| ||||||||||||    
T  34613939 ccaaattgtttgggctccagtggcaatgagctccttccaaaaccgtatccggggaatatcgggttcgattcc 34613868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 7673803 - 7673757
Alignment:
Q  140 ggctgcagtggcaaggagctcatttcaaggacgtacctggggaatat 186  Q
    |||| |||||||||||||||| || |||||||||| |||||||||||    
T  7673803 ggctccagtggcaaggagctccttccaaggacgtatctggggaatat 7673757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 14846525 - 14846595
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||||||||||| || ||||||| ||||| ||  ||||||||||| ||||||||  |||||||||||    
T  14846525 ccaagttgtttgggctccactggcaagaagctccttctaaggacgtacccggggaataccgggttcgattc 14846595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 17981399 - 17981461
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||| |||||||||||||||| || |||||| ||||| ||| ||||  ||||||||||||    
T  17981399 ttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcc 17981461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 6940507 - 6940576
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||||||||||| |||||| |||||||||||| |||||| ||| | ||  ||||| ||||||||||    
T  6940507 ccaagttgtttgggctccagtggtaaggagctcattccaaggaggtatccggaaaatatcgggttcgatt 6940576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 8141051 - 8141120
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||||||||||| |||||||||||||||  || ||||||||||   ||||||||  ||||||||||    
T  8141051 ccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatt 8141120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 11785887 - 11785936
Alignment:
Q  150 gcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||||||| |||||||||||| ||||||||  || |||||||||    
T  11785887 gcaaggagctcattccaaggacgtacccggggaataccggattcgattcc 11785936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 35496406 - 35496369
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgta 174  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  35496406 ttgggctccggtggcaaggagctcatttcaaggacgta 35496369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 18091350 - 18091394
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacg 172  Q
    |||| ||||||||||| ||||||||||||||| ||| ||||||||    
T  18091350 ccaagttgtttgggctccagtggcaaggagcttattccaaggacg 18091394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 892454 - 892381
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 206  Q
    ||||||||||| |||||||||||||||| |||||||||||||   ||||||||  ||||||||||||| |||||    
T  892454 ttgtttgggcttcagtggcaaggagctcctttcaaggacgtattcggggaataccgggttcgattcctaggggg 892381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 15238268 - 15238197
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| || ||||||||||||| || ||||||||||||| |||||||| ||||||||||||    
T  15238268 ccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacctagggaatatcgggttcgattcc 15238197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 18915813 - 18915884
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||||||||  || |||||||||||| ||||||||  ||||||||||||    
T  18915813 ccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcc 18915884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 34719742 - 34719793
Alignment:
Q  148 tggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  34719742 tggcaaggagctccttccaaggacgtacctggggaatactgggttcgattcc 34719793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 32822 - 32888
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||||||| ||||||||| |||||| || |||||||||||| ||||||||| |||| |||||||    
T  32822 ttgtttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgattcc 32888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 30927881 - 30927820
Alignment:
Q  136 tttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||| || |||||||||||||||| || |||||||||||||||| ||||| ||||||||||    
T  30927881 tttggactccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatt 30927820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 17358615 - 17358563
Alignment:
Q  146 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||||||||||||||||||||||||||||  |||||||||  |||||||||||    
T  17358615 agtggcaaggagctcatttcaaggacgtatttggggaataccgggttcgattc 17358563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 26325769 - 26325829
Alignment:
Q  139 gggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||| |||||||||||||||| ||||||||||||| | | ||||||| ||||||||||||    
T  26325769 gggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcc 26325829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 33418277 - 33418197
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggggga 208  Q
    |||| ||||||||||| |||||||||||||||| || ||| |||||||| || |||||  || |||||||||| |||||||    
T  33418277 ccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctagggggga 33418197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 5855468 - 5855539
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||||||||| || ||||||||||   ||||||||  ||||||||||||    
T  5855468 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcc 5855539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 8763937 - 8764008
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| | |||||||||||||| || |||||||||||| ||||||||| ||||||| ||||    
T  8763937 ccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcc 8764008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 41664018 - 41663947
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| |||||||||||||||| ||  ||||||||| | ||||||||  ||||||||||||    
T  41664018 ccaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcc 41663947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 51437415 - 51437486
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| ||||| ||| |||||| ||||||||||||| | | ||||||| ||||||||||||    
T  51437415 ccaagttgtttgggcttcagtgacaatgagctcctttcaaggacgtatccgaggaatatcgggttcgattcc 51437486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 12036906 - 12036828
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttggggg 206  Q
    |||| ||||||||||| | |||||||| ||||| || ||||||||||||| | ||||| |||||| ||||||| |||||    
T  12036906 ccaagttgtttgggctccggtggcaagaagctccttccaaggacgtacctagagaatactgggtttgattcctaggggg 12036828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 45362036 - 45361974
Alignment:
Q  136 tttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||||||| |||||||||||||||| || ||||||||||||  |||||||  |||||||||||    
T  45362036 tttgggcttcagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattc 45361974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 34334439 - 34334386
Alignment:
Q  146 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||||||||||| |||||||||| | ||||||||  ||||||||||||    
T  34334439 agtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcc 34334386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 48798232 - 48798163
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||||| ||||| |||||||||||||||| || ||| |||||| | ||||||||| ||||||||||    
T  48798232 ccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatt 48798163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 50503505 - 50503452
Alignment:
Q  146 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||| |||||||| ||||||||||||| | ||||||||| ||||||||||||    
T  50503505 agtggcgaggagctcctttcaaggacgtatccggggaatatcgggttcgattcc 50503452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 10173128 - 10173076
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaata 185  Q
    ||||||||||| ||||||||||| |||| || |||||||||| ||||||||||    
T  10173128 ttgtttgggctccagtggcaaggtgctccttccaaggacgtatctggggaata 10173076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 47313055 - 47312983
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg 205  Q
    ||||||||||| ||||||||| ||| || || |||||||||| ||||||||||  ||||| ||||||| ||||    
T  47313055 ttgtttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtttgattcctagggg 47312983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 2981093 - 2981022
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| |||||||  ||||||||||||||| || || ||||||| | |||||||| |||||||||||||    
T  2981093 ccaagttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcc 2981022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 5063986 - 5063935
Alignment:
Q  147 gtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||||||| ||||| || |||||||||| |||||||||||||| ||||||||    
T  5063986 gtggcaagaagctccttccaaggacgtatctggggaatattggattcgattc 5063935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 9659328 - 9659269
Alignment:
Q  140 ggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||||||||||||||  ||||||||||  ||||||||  ||||||||||||    
T  9659328 ggctccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcc 9659269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 17642166 - 17642095
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||||||||||| ||||| |||||||||| || || |||||||||  || |||| |||||||||||||    
T  17642166 ccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcc 17642095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 49078060 - 49078131
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| ||| ||||||| |||||||||||||||| ||  ||||||||| | ||||||||  ||||||||||||    
T  49078060 ccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcc 49078131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 1764346 - 1764280
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||||||| | |||||||||||||| || |||||||||||| ||| ||||  || |||||||||    
T  1764346 ttgtttgggcttctgtggcaaggagctccttccaaggacgtacccgggaaataccggattcgattcc 1764280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 5503977 - 5504047
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||||||||| | |||||||||||||||| || | || ||||| |||||||||||  ||||||||||    
T  5503977 ccaagttgtttgggttccagtggcaaggagctccttccgagaacgtatctggggaatatcaggttcgattc 5504047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 43959974 - 43959912
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    ||||||| ||||||||||| |||| || ||| |||||||| ||||||||| |||||| |||||    
T  43959974 ttgggctccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcc 43959912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 10422734 - 10422803
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| ||||||||||| |||||||||||||||| || ||| ||||||   ||||||||  ||||||||||    
T  10422734 ccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatt 10422803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 31152662 - 31152731
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||| |||||||||||  ||||||||||||||| || |||||| |||||  |||||||  ||||||||||    
T  31152662 ccaagttgtttgggctctagtggcaaggagctctttccaaggatgtacccagggaataccgggttcgatt 31152731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 9853430 - 9853362
Alignment:
Q  137 ttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattccttgggg 205  Q
    ||||||| |||||||||||||||| || |||||| ||||| ||  ||||  ||||||||||||| ||||    
T  9853430 ttgggctccagtggcaaggagctccttccaaggatgtacccggaaaataccgggttcgattcctagggg 9853362  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 32151079 - 32151039
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgt 173  Q
    ||||||||||| |||||||||||||||| || |||||||||    
T  32151079 ttgtttgggctccagtggcaaggagctccttccaaggacgt 32151039  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 34877936 - 34878008
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcct 200  Q
    |||| ||||||||||| |||||||||||||| | || ||||||||||   ||||||||   ||||||||||||    
T  34877936 ccaagttgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattcct 34878008  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 68465 - 68536
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||| |||||||||||  ||||||||||||||| || |||||||||||| ||| ||||| ||||||||||||    
T  68465 ccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcc 68536  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 250174 - 250118
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaat 184  Q
    |||| ||| ||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  250174 ccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 250118  T

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Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 271216 - 271164
Alignment:
Q  147 gtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||||||| || |||||||||||| || |||||| ||||||||||||    
T  271216 gtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcc 271164  T

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Target: scaffold0384 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 5939 - 5990
Alignment:
Q  146 agtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    ||||||||||||||| |||||||| |||||| |||||||| |||||||||||    
T  5939 agtggcaaggagctcctttcaagggcgtacccggggaatactgggttcgatt 5990  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 40992 - 41062
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||||||||||| |||||||||||||||| || || ||||||||   |||||||| |||||||||||    
T  40992 ccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattc 41062  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 518 - 588
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgattc 198  Q
    |||| ||| |||||||  ||||||||||||||| || |||||||||||| ||||||||  |||||||||||    
T  518 ccaagttgcttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 588  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 139397 - 139454
Alignment:
Q  146 agtggcaaggagctcatttcaaggacgtac----ctggggaatattgggttcgattcc 199  Q
    ||||||||||||||| || |||||||||||    ||||||||||| ||||||||||||    
T  139397 agtggcaaggagctccttccaaggacgtacgtatctggggaatatcgggttcgattcc 139454  T

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Target: scaffold0332 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 15284 - 15348
Alignment:
Q  133 ttgtttgggctgcagtggcaaggagctcatttcaaggacgtacctggggaatattgggttcgatt 197  Q
    |||||||||||  ||||||||||||||| || |||||| ||||| ||||||||  ||||||||||    
T  15284 ttgtttgggctctagtggcaaggagctccttacaaggaagtacccggggaataccgggttcgatt 15348  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 9407 - 9455
Alignment:
Q  151 caaggagctcatttcaaggacgtacctggggaatattgggttcgattcc 199  Q
    |||||||||| |||||||||||||| |||||||||  ||||||||||||    
T  9407 caaggagctcctttcaaggacgtacttggggaataccgggttcgattcc 9455  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 8871 - 8825
Alignment:
Q  128 ccaaattgtttgggctgcagtggcaaggagctcatttcaaggacgta 174  Q
    |||| ||||||||||| |||||||||||||||| || ||||||||||    
T  8871 ccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 8825  T

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