View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6537_high_10 (Length: 358)
Name: NF6537_high_10
Description: NF6537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6537_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 16353337 - 16353673
Alignment:
| Q |
1 |
acgtatggaggacgaagcacgtgtagagggcggttatggagacctctattggatactatcagagagaagtcattcaatagaagtaatgaatccgatttga |
100 |
Q |
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| T |
16353337 |
acgtatggaggacgaagcacgtgtagagggcggttatggagacctctattggatactatcagagagaagtcattcaatagaagtaatgaatccgatttga |
16353436 |
T |
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| Q |
101 |
aagaatttctttgaagtttgcacaatcttgtggactaaggtaatacaagagagaaagaaggcatgttaggttgtttgatgaatctattgatcgaaaggga |
200 |
Q |
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| T |
16353437 |
aagaatttctttgaagtttgcacaatcttgtggactaaggtaatacaagagagaaagaaggcatgttaggttgtttgatgaatctattgatcgaaaggga |
16353536 |
T |
|
| Q |
201 |
gaaaagttgagacatttgcttttgaatatttcttgtgtttgatttttctgtgaatgctcctaaaggtatgatgtaaatgtttatgatcttgatatttcag |
300 |
Q |
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| T |
16353537 |
gaaaagttgagacatttgcttttgaatatttcttgtgtttgatttttctgtgaatgctcctaaaggtatgatgtaaatgtttatgatcttgatatttcag |
16353636 |
T |
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| Q |
301 |
tttgtagatttcatggtaagtcttataagaattggat |
337 |
Q |
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| T |
16353637 |
tttgtagatttcatggtaagtcttataagaattggat |
16353673 |
T |
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