View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6537_low_5 (Length: 493)
Name: NF6537_low_5
Description: NF6537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6537_low_5 |
 | |
|
| [»] scaffold0627 (2 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 462; Significance: 0; HSPs: 22)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 9 - 474
Target Start/End: Complemental strand, 8529277 - 8528812
Alignment:
| Q |
9 |
agcaaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcataatgttttttgttgtag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8529277 |
agcaaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcgtttccttctcctccacatgtgtttggaaatcataatgttttttgttgtag |
8529178 |
T |
|
| Q |
109 |
gcctattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattgga |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8529177 |
gcctattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattgga |
8529078 |
T |
|
| Q |
209 |
gaatcatggactaagatttacaacatcgatacttcgttcaatcctttggatcgtgttccacggggttatggtttaagctggccgataaaacactttgaag |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8529077 |
gaatcatggactaagatttacaacatcgatacttcgttcaatcctttggatcgtgttccacggggttatggtttaagctggccgataaaacactttgaag |
8528978 |
T |
|
| Q |
309 |
aaggtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatgggagtcggat |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8528977 |
aaggtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatgggagtcggat |
8528878 |
T |
|
| Q |
409 |
aaattattttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaaggagt |
474 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8528877 |
aaattattttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaaggagt |
8528812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 10 - 471
Target Start/End: Complemental strand, 8535840 - 8535370
Alignment:
| Q |
10 |
gcaaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcataatg------ttttttgt |
103 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||| | || |||||||||||||||||||||| ||||||||||||||||| || || || |
|
|
| T |
8535840 |
gcaaaggtcaatattgattttctgctttgaaagtgagacgctgaagtcatttccttctcctccacagatgtttggaaatcataataatggatttcttagt |
8535741 |
T |
|
| Q |
104 |
tgtaggcctattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggca |
203 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
8535740 |
aatagacatattagcatgggagaattaaagggatttctttacatttgtgattcgacctttttatctgatgtttcaatgtgggttatgaatgaatatggca |
8535641 |
T |
|
| Q |
204 |
ttggagaatcatggactaagatttacaacatcgatacttcgttcaatcctttgga---tcgtgttccacggggttatggtttaagctggccgataaaaca |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| ||||||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
8535640 |
ttggagaatcatggactaagatttacaacattgatacttcattcaatccttcggaaagtcgtgttccacggagatatggtttaagctggccaataaaaca |
8535541 |
T |
|
| Q |
301 |
ctttgaagaaggtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatggg |
400 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| |||||||| |||||||| ||| |||||||||||||| | ||| |
|
|
| T |
8535540 |
ctttgaagaaggtgctgccatattgttatatcattcctgcaattgttttatctactatgaacctgagaaatatggattcgaagtttttcgaatttacggg |
8535441 |
T |
|
| Q |
401 |
agtcggataaattattttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaagg |
471 |
Q |
| |
|
||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8535440 |
agtagttcaaatttttttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaagg |
8535370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 9 - 473
Target Start/End: Original strand, 9074492 - 9074959
Alignment:
| Q |
9 |
agcaaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcataatgtttt--ttgttgt |
106 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||| | |||||| |
|
|
| T |
9074492 |
agcaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtgtttggaaaccataatagtggaattgttga |
9074591 |
T |
|
| Q |
107 |
aggcctat-tagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcatt |
205 |
Q |
| |
|
| | || |||||||||||||||||||||||| ||||||||||| ||| ||| ||||| |||||||| |||||||||||||||||||||| ||| |
|
|
| T |
9074592 |
taacagacatatcatgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgtttcagtgtgggttatgaatgaatatggtatt |
9074691 |
T |
|
| Q |
206 |
ggagaatcatggactaagatttacaacatcgatacttcgttcaatcctttgga---tcgtgttccacggggttatggtttaagctggccgataaaacact |
302 |
Q |
| |
|
| ||||||||||||||| |||||||||| ||||||||||||||||||| || || | || || |||||| |||||| |||||||||||||||| |
|
|
| T |
9074692 |
gaagaatcatggactaaagtttacaacattgatacttcgttcaatccttcgggctgtcttattacatggggttcaggttta---tggccgataaaacact |
9074788 |
T |
|
| Q |
303 |
ttgaagaaggtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatgggag |
402 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| || ||||||||||| || ||| |||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
9074789 |
ttgaagaaggtgctgccatattgttatatcattgctacaattgttttatcttctatgaacctgagaaatatggattcaaagtttttcgaattcatgggag |
9074888 |
T |
|
| Q |
403 |
tcggataaattattttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaaggag |
473 |
Q |
| |
|
|| ||| | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9074889 |
tcattcaaagttttttgaagtaatcccacatattccaagtctaatttcattgaaggatgtcttgaaaggag |
9074959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 9 - 471
Target Start/End: Original strand, 1600066 - 1600517
Alignment:
| Q |
9 |
agcaaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcataatgtttt---ttgttg |
105 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||| | |
|
|
| T |
1600066 |
agcaaatgtcaatattggttttctgttttgaaagtgagaggttgcagtcatttccttctcctccacatgagtttggaaatcataataatggaacttgtgg |
1600165 |
T |
|
| Q |
106 |
ta---ggcctattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggc |
202 |
Q |
| |
|
|| | | | |||||||||||||||||||||||||||| ||||||||||| | |||||| ||||| ||||| |||||||||||||||| ||||||||| |
|
|
| T |
1600166 |
taacagccatgttagcatgggagaattaaagggatttctttacatttgtga--ctacctttttatctgatgttccaatgtgggttatgaaggaatatggc |
1600263 |
T |
|
| Q |
203 |
attggagaatcatggactaagatttacaacatcgatacttcgttcaatcctttggatcgtgttccacggggttatggtttaagctggccgataaaacact |
302 |
Q |
| |
|
|||| |||||||||||||||| ||||||| ||||||||| |||||||||| || || || ||| |||||| ||||||||| |||||| |
|
|
| T |
1600264 |
attgaagaatcatggactaaggtttacaagtacgatacttcattcaatcctt---------tttcatggtgttcgggttta---tggccgatacaacact |
1600351 |
T |
|
| Q |
303 |
ttgaagaaggtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatgggag |
402 |
Q |
| |
|
|||||||||||||||||||||||| |||| || | ||||||||| | ||| || ||||||| |||||| | | ||||| |||| |||||||||||| |
|
|
| T |
1600352 |
ttgaagaaggtgctgccatattgttatatgat---tacaattgtttaatctattatgaacctgcgaaatatcgatgcaaagcttttgaaattcatgggag |
1600448 |
T |
|
| Q |
403 |
tcggataaattattttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaagg |
471 |
Q |
| |
|
||| | ||| ||||||| ||||||| || ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1600449 |
tcgttcagattgttttgaaataatcccgcatattccaagtctaatttcattgaaggatgtcttgaaagg |
1600517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 171 - 396
Target Start/End: Complemental strand, 8637039 - 8636811
Alignment:
| Q |
171 |
atgtttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacatcgatacttcgttcaatcctttgg---atcgtgttcc |
267 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| |||||||| | || | | |
|
|
| T |
8637039 |
atgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaacatcgatactttggtcagtcctttgggcagacctgattc |
8636940 |
T |
|
| Q |
268 |
acggggttatggtttaagctggccgataaaacactttgaagaaggtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaa |
367 |
Q |
| |
|
| | |||||||| || | |||||| |||||||||||||||| || ||||||||||||| ||||||||||| ||||||| ||| |||||| ||||| || |
|
|
| T |
8636939 |
gcagcgttatggtatatgatggccggtaaaacactttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatgaacccgag |
8636840 |
T |
|
| Q |
368 |
aaatatgggttcaaagtttttcgaattca |
396 |
Q |
| |
|
||| ||| |||||||||||| ||||||| |
|
|
| T |
8636839 |
aaacttggtttcaaagtttttagaattca |
8636811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 473
Target Start/End: Complemental strand, 8644546 - 8644079
Alignment:
| Q |
12 |
aaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatca---taatgttttttgttgtag |
108 |
Q |
| |
|
||||||| |||||| |||||| ||||||| |||||||||||| |||||||||||||||||| |||||| |||||| ||||| ||| || ||| |
|
|
| T |
8644546 |
aaaggtctatattgtgtttctgttttgaaagtgagaggttgcaatcatttccttctcctcca---gtgtttcaaaatcaaaataatggatttcgtcgtaa |
8644450 |
T |
|
| Q |
109 |
---gcctattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatc-taatgtttcaatgtgggttatgaatgaatatggcat |
204 |
Q |
| |
|
|| |||| ||||||||||||||| |||||| || |||||||| ||| | | || | || | ||||| |||||||||||||||||||||||| ||| |
|
|
| T |
8644449 |
cgagcgtattcgcatgggagaattaaggggattactttacatttgcgatac-atattcttttcgtgatgttgcaatgtgggttatgaatgaatatgacat |
8644351 |
T |
|
| Q |
205 |
tggagaatcatggactaagatttacaacatcgatacttcgttcaatcctttgg---atcgtgttccacggggttatggtttaagctggccgataaaacac |
301 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||| | ||| |||||||| | || | | | | ||||||||||| | |||||| ||||| || |
|
|
| T |
8644350 |
tggagaatcatggactaaggtttacaacattgatactttgatcagtcctttgggcagacctgattcgcagcgttatggtttatgttggccggtaaaaaac |
8644251 |
T |
|
| Q |
302 |
tttgaagaaggtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatggga |
401 |
Q |
| |
|
|||||||| || ||||||||||||| ||||||||||| ||||||| ||| |||||| ||||| | ||| ||| |||||||||||||||||||| || | |
|
|
| T |
8644250 |
tttgaagagggggctgccatattgttatatcattcctgcaattgtcttatctactatgaacccaagaaacatgctttcaaagtttttcgaattcacggca |
8644151 |
T |
|
| Q |
402 |
-gtcggataaattattttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaaggag |
473 |
Q |
| |
|
|| |||| | ||||| |||| ||||| ||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
8644150 |
tttcttccgaatt-tgttgaaataattccacatgttccaagtctaatctcattgaaggatgttgtgaaaggag |
8644079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 171 - 473
Target Start/End: Complemental strand, 8677986 - 8677672
Alignment:
| Q |
171 |
atgtttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacatcgatactt-----cgt----tcaatcctttggatcg |
261 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||| | ||| ||| |||||||| | |
|
|
| T |
8677986 |
atgttgcaatgtgggatatgaatgaatatggcattggagaatcatggactaaggtttacaacattgatattgtggtccgtcctgtcagtcctttgggcag |
8677887 |
T |
|
| Q |
262 |
---tgttccacggggttatggtttaagctggccgataaaacactttgaagaaggtgctgccatattgtcatatcattcctccaattgttttacctactac |
358 |
Q |
| |
|
|| | | ||| |||||||||| | |||||| |||||||||||||||| |||||||||||||||| ||||||||||| ||||||| ||| |||||| |
|
|
| T |
8677886 |
acctgattcgcggcattatggtttatgttggccggtaaaacactttgaagagggtgctgccatattgttatatcattcctgcaattgtcttatctactat |
8677787 |
T |
|
| Q |
359 |
gaacctgaaaaatatgggttcaaagtttttcgaattcatggga-gtcggataaattattttgaagtaatcccacacattccaagtctaatttcattgaag |
457 |
Q |
| |
|
||||| || ||| |||| |||||||||||||||||||| || | || |||| | ||||| |||| ||||| ||||||||||||| ||||||||| |
|
|
| T |
8677786 |
gaacccgagaaacatggtttcaaagtttttcgaattcacggcacttcttccgaatt-tgttgaaataattccacatgttccaagtctaatctcattgaag |
8677688 |
T |
|
| Q |
458 |
gatgttttgaaaggag |
473 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
8677687 |
gatgttgtgaaaggag |
8677672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 8641720 - 8641475
Alignment:
| Q |
9 |
agcaaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcataat---------gtttt |
99 |
Q |
| |
|
|||||||||||||||| |||||| || |||| |||||| ||| ||| ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
8641720 |
agcaaaggtcaatattatgtttctgtttggaaagtgagagattgaagttatttccttctcctccacatgtgtttggaaatcataataataatggaattca |
8641621 |
T |
|
| Q |
100 |
ttgttgtaggcctattagcatgggagaattaaagggatttctatacatttgtgatc------cgacctttatatctaatgtttcaatgtgggttatgaat |
193 |
Q |
| |
|
| || |||| ||||||||||||||| ||||||||||||| ||||||||||||| |||||||| | | | |||| || |||||||||||||| |
|
|
| T |
8641620 |
tggtaacaggcttattagcatgggagagttaaagggatttccttacatttgtgatcgtgactcgacctttttctttgatgtcacagtgtgggttatgaat |
8641521 |
T |
|
| Q |
194 |
gaatatggcattggagaatcatggactaagatttacaacatcgata |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
8641520 |
gaatatggcattggagaatcatggactaaggcttacaacattgata |
8641475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 35 - 244
Target Start/End: Original strand, 2856682 - 2856897
Alignment:
| Q |
35 |
tttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcat---aatgttttttgttgtag---gcctattagcatgggagaat |
128 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||| ||||||||| |
|
|
| T |
2856682 |
tttgaaagtgagaggttgcagtcgtttccttctcctccacatgtgtttggaaatcatgataatggatttccccatagcatgcctattagattgggagaat |
2856781 |
T |
|
| Q |
129 |
taaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagattta |
228 |
Q |
| |
|
| ||||||||||| ||||||||| || | | | | |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2856782 |
tgaagggatttctttacatttgtcatagatcgtctctcgagaatgttacaatgtgggttatgaatgaatatggcattggagaatcatggactattgttta |
2856881 |
T |
|
| Q |
229 |
caacatcgatacttcg |
244 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
2856882 |
caacattgatacttcg |
2856897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 35 - 244
Target Start/End: Original strand, 2874292 - 2874507
Alignment:
| Q |
35 |
tttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcat---aatgttttttgttgtag---gcctattagcatgggagaat |
128 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||| ||||||||| |
|
|
| T |
2874292 |
tttgaaagtgagaggttgcagtcgtttccttctcctccacatgtgtttggaaatcatgataatggatttccccatagcatgcctattagattgggagaat |
2874391 |
T |
|
| Q |
129 |
taaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagattta |
228 |
Q |
| |
|
| ||||||||||| ||||||||| || | | | | |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2874392 |
tgaagggatttctttacatttgtcatagatcgtctctcgagaatgttacaatgtgggttatgaatgaatatggcattggagaatcatggactattgttta |
2874491 |
T |
|
| Q |
229 |
caacatcgatacttcg |
244 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
2874492 |
caacattgatacttcg |
2874507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 35 - 244
Target Start/End: Original strand, 2844855 - 2845070
Alignment:
| Q |
35 |
tttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcat---aatgttttttgttgtag---gcctattagcatgggagaat |
128 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||| ||||||||| |
|
|
| T |
2844855 |
tttgaaagtgagaggttgcagtcgtttccttctcctccacatgtgtttggaaatcatgataatggatttccccttagcatgcctattagattgggagaat |
2844954 |
T |
|
| Q |
129 |
taaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagattta |
228 |
Q |
| |
|
| ||||||||||| ||||||||| || | | | | |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2844955 |
tgaagggatttctttacatttgtcatatatcgtctcttgagaatgttacaatgtgggttatgaatgaatatggcattggagaatcatggactattgttta |
2845054 |
T |
|
| Q |
229 |
caacatcgatacttcg |
244 |
Q |
| |
|
|| ||| ||||||||| |
|
|
| T |
2845055 |
cagcattgatacttcg |
2845070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 2904938 - 2905003
Alignment:
| Q |
177 |
caatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacatcgatactt |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2904938 |
caatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacattgatactt |
2905003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 473
Target Start/End: Original strand, 8547984 - 8548330
Alignment:
| Q |
112 |
tattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattggagaa |
211 |
Q |
| |
|
||||||| |||||||||||||||||| ||| ||||||||||| || || | | ||| ||||| |||||||||||||||| |||||||| ||| |
|
|
| T |
8547984 |
tattagcttgggagaattaaagggatgtctttacatttgtgactggaactatctctcttatgttacaatgtgggttatgaacgaatatgg------agag |
8548077 |
T |
|
| Q |
212 |
tcatggactaagatttacaacatcgatacttcgttcaatcctttggatcgtgttccacggggttatggtttaagctggccgataaaacactttgaagaag |
311 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| | |||||||| ||| ||| || ||| ||| | | |||| |||||||||||||||| | |
|
|
| T |
8548078 |
tcatggactaagatttaccacattgatactttgaccaatccttc---------tccgcggcgtcatgctttgtgtttgccggtaaaacactttgaagagg |
8548168 |
T |
|
| Q |
312 |
gtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatgggagtcggataaa |
411 |
Q |
| |
|
|||||||| |||||| ||||||||| | |||||||||| ||||| | || || |||||||| |||||| ||||||||||||||| | | | |
|
|
| T |
8548169 |
gtgctgccgtattgttatatcattcattggattgttttacttactataaccccgataaatatggagtcaaagattttcgaattcatggctcttcttcaca |
8548268 |
T |
|
| Q |
412 |
ttattttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaaggag |
473 |
Q |
| |
|
| ||||||||||| | ||| |||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
8548269 |
atcatttgaagtaattcaacatattccaagtctaatctcattgaaggatgtcatgaaaggag |
8548330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 2904774 - 2904848
Alignment:
| Q |
11 |
caaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttgga |
85 |
Q |
| |
|
|||| |||||||||| |||| | ||||||| ||||||| |||| ||||||||||||||||||||| |||||||| |
|
|
| T |
2904774 |
caaaagtcaatattgtgtttcagttttgaaagtgagaggatgcaatcatttccttctcctccacatatgtttgga |
2904848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 8637201 - 8637140
Alignment:
| Q |
12 |
aaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcatttccttctcctcca |
73 |
Q |
| |
|
||||||| |||||| |||||| || ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
8637201 |
aaaggtctatattgtgtttctgtttagaaaatgagaggttgcaatcatttccttctcctcca |
8637140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 472
Target Start/End: Complemental strand, 8641297 - 8641242
Alignment:
| Q |
417 |
ttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaagga |
472 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
8641297 |
ttgaagtaattccacatattccaagtctaatctcattgaaggatgtcgtgaaagga |
8641242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 8641435 - 8641357
Alignment:
| Q |
270 |
ggggttatggtttaagctggccgataaaacactttgaagaaggtgctgccatattgtcatatcattcctccaattgttt |
348 |
Q |
| |
|
||||||||||| || | |||||| ||| |||||||||||| |||||||| ||| || ||||||||||| ||||||||| |
|
|
| T |
8641435 |
ggggttatggtgtatgttggccggtaatacactttgaagatggtgctgcgttatggttatatcattcctgcaattgttt |
8641357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 401
Target Start/End: Original strand, 2856974 - 2857018
Alignment:
| Q |
357 |
acgaacctgaaaaatatgggttcaaagtttttcgaattcatggga |
401 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||| |||| |
|
|
| T |
2856974 |
acgaacctgagaaacatgggttcaaagtttttcgaattcaaggga |
2857018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 401
Target Start/End: Original strand, 2874584 - 2874628
Alignment:
| Q |
357 |
acgaacctgaaaaatatgggttcaaagtttttcgaattcatggga |
401 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||| |||| |
|
|
| T |
2874584 |
acgaacctgagaaacatgggttcaaagtttttcgaattcaaggga |
2874628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 459
Target Start/End: Complemental strand, 9003393 - 9003351
Alignment:
| Q |
417 |
ttgaagtaatcccacacattccaagtctaatttcattgaagga |
459 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| ||||||||||| |
|
|
| T |
9003393 |
ttgaagtaattccacatattccaagtctaatctcattgaagga |
9003351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 357 - 401
Target Start/End: Original strand, 2845147 - 2845191
Alignment:
| Q |
357 |
acgaacctgaaaaatatgggttcaaagtttttcgaattcatggga |
401 |
Q |
| |
|
|||||||||| ||| ||| ||||||||||||||||||||| |||| |
|
|
| T |
2845147 |
acgaacctgagaaacatgagttcaaagtttttcgaattcaaggga |
2845191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 473
Target Start/End: Complemental strand, 8636790 - 8636734
Alignment:
| Q |
417 |
ttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaaggag |
473 |
Q |
| |
|
||||| |||| ||||| ||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
8636790 |
ttgaaataattccacatgttccaagtctaatctcattgaaggatgtcgtgaaaggag |
8636734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 442; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 9 - 474
Target Start/End: Complemental strand, 9443438 - 9442973
Alignment:
| Q |
9 |
agcaaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcataatgttttttgttgtag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
9443438 |
agcaaaggtcaatattggttttctgctttgaaagtgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcataatgtttattgtagtag |
9443339 |
T |
|
| Q |
109 |
gcctattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattgga |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9443338 |
gcctattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattgga |
9443239 |
T |
|
| Q |
209 |
gaatcatggactaagatttacaacatcgatacttcgttcaatcctttggatcgtgttccacggggttatggtttaagctggccgataaaacactttgaag |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9443238 |
gaatcatggactaagatttacaacatcgatacttcgttcaatcctttggatcgtgttccacggggttatggtttaagctggccgataaaacactttgaag |
9443139 |
T |
|
| Q |
309 |
aaggtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatgggagtcggat |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9443138 |
aaggtgctgccatattgtcatatcattccttcaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatgggagtcggaa |
9443039 |
T |
|
| Q |
409 |
aaattattttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaaggagt |
474 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9443038 |
aaattattttgaagtaatccaacacattccaagtctaatttcattgaaggatgttttgaaaggagt |
9442973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 160; Significance: 5e-85; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 9 - 473
Target Start/End: Original strand, 48361618 - 48362093
Alignment:
| Q |
9 |
agcaaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcataatg------ttttttg |
102 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| || || | |
|
|
| T |
48361618 |
agcaaaggtcaatattgtttttctgttttgaaagtgagagggtgcagtcatttccttctcctccacatgtgtttggaaatcataataatggaattcttgg |
48361717 |
T |
|
| Q |
103 |
ttgtaggcctattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggc |
202 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
48361718 |
taacaggcatattagcatgggagaattaaagggatttctttacatttgtgactcgacctttgcatctgatgtttcaatgtgggttatgaatgaatatggt |
48361817 |
T |
|
| Q |
203 |
attggagaatcatggactaagatttacaacatcgatacttcgttcaatcctttg---gatcgtgttccacggggttatggtttaagctggccgataaaac |
299 |
Q |
| |
|
|||| |||||||| ||||||| ||||||||||| ||||| |||||||||||| | | || | | || || | |||| ||||||||||||| |
|
|
| T |
48361818 |
attgaagaatcatagactaaggtttacaacatcaatactgcgttcaatccttcgagcagttttgcttcttggcattcagcttta---tggccgataaaac |
48361914 |
T |
|
| Q |
300 |
actttgaagaaggtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatgg |
399 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| | | |||| | ||| || |||||||| |||||| | | ||||| ||||| ||||| || |
|
|
| T |
48361915 |
actttgaagaaggtgctgccatattgttatatcattcctacgaccgtttaatctattatgaacctgagaaatatagatgcaaagcttttcatattcacgg |
48362014 |
T |
|
| Q |
400 |
gagtcggataaattattttgaagtaatcccacacattccaagtc-----taatttcattgaaggatgttttgaaaggag |
473 |
Q |
| |
|
|||||| | || |||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
48362015 |
gagtcgttcaggttcttttgaagtaatcccacatattccaagtctaatttaatttcattgaaggatgtcttgaaaggag |
48362093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 43 - 473
Target Start/End: Complemental strand, 35780119 - 35779704
Alignment:
| Q |
43 |
tgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcataatgttttttgttgtaggcctattagcatgggagaattaaagggatttcta |
142 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| |||| || | |||| |||||||||||||||||||||||||||||| |
|
|
| T |
35780119 |
tgagaggttgcagccatttccttctcctccacatgtgtttggaattcatgataat---------aggcgtattagcatgggagaattaaagggatttctt |
35780029 |
T |
|
| Q |
143 |
tacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacatcgatactt |
242 |
Q |
| |
|
||||||||||| || ||| | | ||||| ||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||| || |||| |
|
|
| T |
35780028 |
tacatttgtgacttgaatttttttgttgatgttacaatgtgggttatgaatgagcatggcattgaagaatcgtggactaaggtttacaacattgagactt |
35779929 |
T |
|
| Q |
243 |
cgttcaatcctttgg---atcgtgttccacggggttatggtttaagctggccgataaaacactttgaagaaggtgctgccatattgtcatatcattcctc |
339 |
Q |
| |
|
|| ||||| || | | ||| | || ||| | ||||||||||| | |||||| |||||| |||||| ||||||||||| ||||||||| | |
|
|
| T |
35779928 |
cggtcaattctctaggctatcctatttcaccgcgttatggtttatgttggccggtaaaaccctttga---------tgccatattgttatatcattcatg |
35779838 |
T |
|
| Q |
340 |
caattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaattcatgggagtcggataaattattttgaagtaatcccacacattcca |
439 |
Q |
| |
|
||||||||||| ||||| |||||||| |||||||| | ||||||||||||||||| ||||| ||| ||| | | |||||||||| ||||| |||||| |
|
|
| T |
35779837 |
caattgttttatctactttgaacctgagaaatatggatacaaagtttttcgaattcgtgggactcgttcaaaatctgttgaagtaattccacatattcca |
35779738 |
T |
|
| Q |
440 |
agtctaatttcattgaaggatgttttgaaaggag |
473 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||||| |
|
|
| T |
35779737 |
agtctaatatcattgaaggatgttgtaaaaggag |
35779704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 78; Significance: 4e-36; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 26324198 - 26324287
Alignment:
| Q |
165 |
tatctaatgtttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacatcgatacttcgttcaatcctt |
254 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26324198 |
tatctgatgtttcaatgtgggttatgaatgaatatggcactggagaatcatggactaagatttacaacatcgatgcttcgttcaatcctt |
26324287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 287 - 473
Target Start/End: Complemental strand, 5130860 - 5130673
Alignment:
| Q |
287 |
tggccgataaaacactttgaagaaggtgctgccatattgtcatatcattcctccaattgtttt-acctactacgaacctgaaaaatatgggttcaaagtt |
385 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||| ||||||||||| ||| |||||| | ||| | ||||| || |||||| | | ||||||| |
|
|
| T |
5130860 |
tggccggtaaaacactttgaagagggtgctgccatattgctatatcattcctgcaactgttttgtcttaccatgaaccggagaaatatagatacaaagtt |
5130761 |
T |
|
| Q |
386 |
tttcgaattcatgggagtcggataaattattttgaagtaatcccacacattccaagtctaatttcattgaaggatgttttgaaaggag |
473 |
Q |
| |
|
|||||||||||||||| | | ||| | |||||||||| ||||| ||| |||||||||||||| | |||||| || ||||||||| |
|
|
| T |
5130760 |
tttcgaattcatgggacttgttcaaaaaagattgaagtaattccacatatttcaagtctaatttcactaaaggatattgtgaaaggag |
5130673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 5131081 - 5130959
Alignment:
| Q |
35 |
tttgaaaatgagaggttgcagtcatttccttctcctccacatgtgtttggaaatcataatgttttttgttgta---ggcctattagcatgggagaattaa |
131 |
Q |
| |
|
||||||| |||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||| ||||| | | | || ||| ||||||||||||||| |
|
|
| T |
5131081 |
tttgaaagtgagagattgcaatcattcccttctcctccacacgtgtttgaaaatcataatgatttttatggcaccgagcatatcggcatgggagaattaa |
5130982 |
T |
|
| Q |
132 |
agggatttctatacatttgtgat |
154 |
Q |
| |
|
|||||||||| ||||||| |||| |
|
|
| T |
5130981 |
agggatttctttacatttctgat |
5130959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 16716577 - 16716447
Alignment:
| Q |
112 |
tattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattggagaa |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| | | ||| | ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16716577 |
tattagcatgggagaattaaagggatttctatacatttctgactcaaacttcttcgaatatgttacaatgtgggttatgaatgaatatggcattggagaa |
16716478 |
T |
|
| Q |
212 |
tcatggactaagatttacaacatcgatactt |
242 |
Q |
| |
|
|||||||||||| ||||| |||| ||||||| |
|
|
| T |
16716477 |
tcatggactaaggtttaccacattgatactt |
16716447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 16716405 - 16716299
Alignment:
| Q |
294 |
taaaacactttgaagaaggtgctgccatattgtcatatcattcctccaattgttttacctactacgaacctgaaaaatatgggttcaaagtttttcgaat |
393 |
Q |
| |
|
|||||||||||||||| ||||||| | |||||| ||||||||| |||||||||| ||||| || ||| | |||||||| |||| ||||||||| |
|
|
| T |
16716405 |
taaaacactttgaagagggtgctggcgtattgttatatcattcaaatgattgttttacttactatgagcctaataaatatggtgtcaagcgttttcgaat |
16716306 |
T |
|
| Q |
394 |
tcatggg |
400 |
Q |
| |
|
||||||| |
|
|
| T |
16716305 |
tcatggg |
16716299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 4878 - 4735
Alignment:
| Q |
112 |
tattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgtttcaatgtgggttatgaatgaatatggcattggagaa |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| | | || || ||||| ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4878 |
tattagcatgggagaattaaagggatttctttacatttgtgactcaaactccttaaaatatgttacaatgtgggttatgaatgaatatggcattggtgaa |
4779 |
T |
|
| Q |
212 |
tcatggactaagatttacaacatcgatacttcgttcaatccttt |
255 |
Q |
| |
|
|||||||||||| ||||| |||| |||||| || ||||||||| |
|
|
| T |
4778 |
tcatggactaaggtttaccacattaatactttgtacaatccttt |
4735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 4587 - 4539
Alignment:
| Q |
413 |
tattttgaagtaatcccacacattccaagtctaatttcattgaaggatg |
461 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
4587 |
tattttgaagtaattccacatattccaagtctaatctcattgaaggatg |
4539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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