View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6540_high_10 (Length: 452)

Name: NF6540_high_10
Description: NF6540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6540_high_10
NF6540_high_10
[»] chr1 (23 HSPs)
chr1 (236-436)||(14792511-14792709)
chr1 (236-423)||(18121509-18121694)
chr1 (236-436)||(44892355-44892553)
chr1 (244-435)||(38887037-38887225)
chr1 (236-397)||(41225441-41225600)
chr1 (236-397)||(41226694-41226853)
chr1 (302-395)||(21243746-21243838)
chr1 (278-436)||(24719459-24719615)
chr1 (369-436)||(16058255-16058329)
chr1 (284-387)||(39061275-39061375)
chr1 (277-388)||(21188030-21188138)
chr1 (372-436)||(51324544-51324608)
chr1 (236-278)||(21243841-21243883)
chr1 (369-423)||(24723312-24723366)
chr1 (272-388)||(11808187-11808288)
chr1 (236-302)||(8306510-8306577)
chr1 (236-279)||(17901905-17901948)
chr1 (292-335)||(40390112-40390155)
chr1 (371-436)||(21168972-21169038)
chr1 (235-279)||(6834074-6834118)
chr1 (236-279)||(21239146-21239189)
chr1 (83-159)||(16025342-16025420)
chr1 (278-341)||(12710814-12710877)
[»] scaffold0401 (1 HSPs)
scaffold0401 (236-435)||(8727-8924)
[»] chr6 (20 HSPs)
chr6 (236-436)||(22557154-22557351)
chr6 (236-435)||(7217193-7217389)
chr6 (236-436)||(23431388-23431593)
chr6 (236-436)||(18455021-18455219)
chr6 (236-397)||(25921907-25922066)
chr6 (236-436)||(32259751-32259948)
chr6 (236-385)||(31734613-31734760)
chr6 (236-341)||(23657994-23658099)
chr6 (286-388)||(1818909-1819008)
chr6 (369-436)||(21683023-21683090)
chr6 (307-388)||(25601326-25601406)
chr6 (352-436)||(28948597-28948679)
chr6 (320-394)||(31166230-31166302)
chr6 (277-388)||(18459253-18459362)
chr6 (236-279)||(29045170-29045213)
chr6 (371-436)||(19167800-19167866)
chr6 (349-393)||(13285767-13285809)
chr6 (286-355)||(18982371-18982439)
chr6 (369-436)||(18982609-18982677)
chr6 (277-341)||(24506157-24506220)
[»] chr4 (25 HSPs)
chr4 (236-436)||(19565866-19566064)
chr4 (236-432)||(46741105-46741299)
chr4 (236-423)||(12623222-12623407)
chr4 (236-436)||(33243235-33243440)
chr4 (236-395)||(40230212-40230369)
chr4 (236-388)||(44023599-44023749)
chr4 (236-341)||(33186808-33186913)
chr4 (236-330)||(12424345-12424439)
chr4 (321-436)||(26921457-26921570)
chr4 (286-436)||(2424335-2424483)
chr4 (236-388)||(18462929-18463079)
chr4 (83-179)||(355687-355784)
chr4 (286-436)||(26446163-26446311)
chr4 (286-388)||(14477588-14477687)
chr4 (286-388)||(13165089-13165188)
chr4 (321-369)||(45314096-45314144)
chr4 (236-302)||(16296777-16296844)
chr4 (10-55)||(355557-355602)
chr4 (286-436)||(14631091-14631238)
chr4 (341-408)||(26014295-26014360)
chr4 (308-397)||(9638987-9639075)
chr4 (369-436)||(16296975-16297041)
chr4 (292-335)||(20150787-20150830)
chr4 (404-436)||(15115293-15115325)
chr4 (404-436)||(37019741-37019773)
[»] scaffold0439 (1 HSPs)
scaffold0439 (236-436)||(4327-4525)
[»] scaffold0039 (1 HSPs)
scaffold0039 (236-436)||(9876-10074)
[»] chr5 (15 HSPs)
chr5 (236-436)||(14025755-14025953)
chr5 (236-435)||(8833155-8833352)
chr5 (236-436)||(26749938-26750135)
chr5 (236-397)||(8503875-8504034)
chr5 (236-385)||(26762308-26762455)
chr5 (283-436)||(1626868-1627017)
chr5 (374-436)||(660830-660892)
chr5 (286-388)||(21504096-21504195)
chr5 (394-436)||(20197606-20197648)
chr5 (369-432)||(21299989-21300059)
chr5 (46-137)||(23374572-23374666)
chr5 (292-335)||(24068191-24068234)
chr5 (368-397)||(19921680-19921709)
chr5 (369-397)||(21398631-21398659)
chr5 (325-388)||(21404080-21404141)
[»] chr3 (28 HSPs)
chr3 (236-435)||(53646001-53646205)
chr3 (236-368)||(54330321-54330453)
chr3 (236-336)||(14152446-14152546)
chr3 (236-335)||(5215552-5215651)
chr3 (293-436)||(15566706-15566855)
chr3 (277-388)||(21845648-21845756)
chr3 (286-388)||(48631288-48631387)
chr3 (45-179)||(511652-511789)
chr3 (236-304)||(15566418-15566486)
chr3 (372-427)||(24548911-24548966)
chr3 (332-397)||(50350803-50350866)
chr3 (277-388)||(3160623-3160731)
chr3 (375-422)||(24547243-24547290)
chr3 (398-436)||(6820237-6820275)
chr3 (372-436)||(6159445-6159516)
chr3 (352-436)||(11563747-11563828)
chr3 (369-436)||(17518814-17518888)
chr3 (369-436)||(17533676-17533750)
chr3 (369-436)||(6156747-6156813)
chr3 (369-436)||(35960877-35960943)
chr3 (369-436)||(40808033-40808099)
chr3 (369-436)||(44274455-44274521)
chr3 (236-279)||(45803440-45803483)
chr3 (10-55)||(511825-511870)
chr3 (97-137)||(10289882-10289923)
chr3 (369-397)||(14641535-14641563)
chr3 (404-436)||(33565158-33565190)
chr3 (369-397)||(49900767-49900795)
[»] scaffold0385 (1 HSPs)
scaffold0385 (236-436)||(251-449)
[»] chr8 (25 HSPs)
chr8 (236-436)||(17978364-17978562)
chr8 (236-436)||(22474662-22474860)
chr8 (236-397)||(12037151-12037310)
chr8 (236-397)||(21579193-21579352)
chr8 (236-397)||(29762855-29763014)
chr8 (236-385)||(41680132-41680279)
chr8 (236-397)||(22208174-22208334)
chr8 (257-435)||(36405085-36405257)
chr8 (236-397)||(22258293-22258453)
chr8 (286-436)||(4380565-4380713)
chr8 (372-436)||(36732360-36732424)
chr8 (369-436)||(5761570-5761637)
chr8 (369-436)||(21514728-21514795)
chr8 (369-436)||(22317859-22317926)
chr8 (292-388)||(20879435-20879528)
chr8 (369-436)||(22532080-22532147)
chr8 (369-436)||(22536765-22536832)
chr8 (369-408)||(20022016-20022055)
chr8 (338-388)||(20517032-20517080)
chr8 (292-335)||(22966772-22966815)
chr8 (369-436)||(42265457-42265524)
chr8 (369-436)||(20397457-20397525)
chr8 (292-330)||(21697512-21697550)
chr8 (404-436)||(38989707-38989739)
chr8 (404-436)||(39020804-39020836)
[»] scaffold0630 (1 HSPs)
scaffold0630 (236-436)||(8969-9166)
[»] scaffold0011 (1 HSPs)
scaffold0011 (236-432)||(33360-33554)
[»] chr7 (22 HSPs)
chr7 (236-436)||(14317978-14318175)
chr7 (236-397)||(14160843-14161002)
chr7 (236-368)||(9743093-9743225)
chr7 (236-385)||(15119306-15119453)
chr7 (236-397)||(43276731-43276890)
chr7 (286-436)||(4690611-4690759)
chr7 (286-436)||(43745612-43745760)
chr7 (239-330)||(8513806-8513898)
chr7 (372-434)||(48212677-48212739)
chr7 (308-388)||(42565829-42565907)
chr7 (345-435)||(8135187-8135275)
chr7 (274-388)||(33060383-33060494)
chr7 (283-330)||(8488147-8488194)
chr7 (369-436)||(20214184-20214250)
chr7 (369-435)||(24269895-24269962)
chr7 (369-436)||(47095489-47095555)
chr7 (369-415)||(15095606-15095652)
chr7 (371-436)||(13132285-13132349)
chr7 (369-397)||(58400-58428)
chr7 (369-397)||(12127150-12127178)
chr7 (404-436)||(14180347-14180379)
chr7 (369-397)||(19195648-19195676)
[»] scaffold0048 (1 HSPs)
scaffold0048 (236-436)||(56882-57077)
[»] scaffold0020 (1 HSPs)
scaffold0020 (236-385)||(174127-174274)
[»] chr2 (23 HSPs)
chr2 (236-436)||(23968571-23968769)
chr2 (236-397)||(14179715-14179874)
chr2 (236-397)||(14183453-14183612)
chr2 (236-380)||(24717925-24718067)
chr2 (303-388)||(19647206-19647289)
chr2 (352-436)||(19201148-19201230)
chr2 (274-388)||(20005967-20006078)
chr2 (369-436)||(22502008-22502082)
chr2 (369-436)||(22509942-22510016)
chr2 (286-388)||(28652548-28652648)
chr2 (369-436)||(23610663-23610730)
chr2 (371-432)||(149446-149514)
chr2 (321-436)||(12626367-12626488)
chr2 (308-388)||(45535903-45535981)
chr2 (358-423)||(18388151-18388214)
chr2 (45-137)||(43938684-43938779)
chr2 (236-302)||(149585-149652)
chr2 (286-365)||(25584280-25584358)
chr2 (236-287)||(12626527-12626578)
chr2 (369-436)||(24516223-24516289)
chr2 (369-397)||(17307523-17307551)
chr2 (369-397)||(21369330-21369358)
chr2 (376-436)||(22260082-22260142)
[»] scaffold0063 (1 HSPs)
scaffold0063 (236-388)||(62624-62774)
[»] scaffold0371 (2 HSPs)
scaffold0371 (236-385)||(10445-10592)
scaffold0371 (308-385)||(3853-3927)
[»] scaffold0108 (1 HSPs)
scaffold0108 (236-436)||(6322-6522)
[»] scaffold0431 (1 HSPs)
scaffold0431 (236-330)||(5536-5630)
[»] scaffold0261 (1 HSPs)
scaffold0261 (287-433)||(6371-6514)
[»] scaffold1437 (1 HSPs)
scaffold1437 (236-355)||(321-440)
[»] scaffold1160 (1 HSPs)
scaffold1160 (236-329)||(590-683)
[»] scaffold0121 (1 HSPs)
scaffold0121 (236-330)||(20105-20199)
[»] scaffold0092 (1 HSPs)
scaffold0092 (236-388)||(38438-38588)
[»] scaffold0021 (3 HSPs)
scaffold0021 (236-298)||(169346-169408)
scaffold0021 (303-390)||(17078-17163)
scaffold0021 (303-390)||(26609-26694)
[»] scaffold0056 (1 HSPs)
scaffold0056 (372-436)||(18315-18379)
[»] scaffold0217 (1 HSPs)
scaffold0217 (303-388)||(28686-28769)
[»] scaffold0165 (2 HSPs)
scaffold0165 (277-390)||(31877-31987)
scaffold0165 (320-384)||(32038-32100)
[»] scaffold0203 (1 HSPs)
scaffold0203 (286-440)||(17877-18036)
[»] scaffold0337 (1 HSPs)
scaffold0337 (277-388)||(3152-3260)
[»] scaffold0059 (1 HSPs)
scaffold0059 (286-436)||(49686-49834)
[»] scaffold0017 (2 HSPs)
scaffold0017 (277-388)||(23561-23669)
scaffold0017 (369-436)||(26764-26831)
[»] scaffold0004 (1 HSPs)
scaffold0004 (369-436)||(328236-328303)
[»] scaffold0103 (1 HSPs)
scaffold0103 (83-179)||(30436-30532)
[»] scaffold1256 (1 HSPs)
scaffold1256 (308-422)||(2162-2275)
[»] scaffold0516 (2 HSPs)
scaffold0516 (308-422)||(5267-5380)
scaffold0516 (369-422)||(5170-5223)
[»] scaffold1939 (1 HSPs)
scaffold1939 (241-386)||(38-181)
[»] scaffold0007 (2 HSPs)
scaffold0007 (369-436)||(158770-158837)
scaffold0007 (369-436)||(18648-18716)
[»] scaffold0394 (1 HSPs)
scaffold0394 (277-388)||(7510-7618)
[»] scaffold0111 (1 HSPs)
scaffold0111 (369-436)||(12474-12548)
[»] scaffold0058 (1 HSPs)
scaffold0058 (277-388)||(59652-59760)
[»] scaffold1102 (1 HSPs)
scaffold1102 (304-388)||(1947-2029)
[»] scaffold0125 (1 HSPs)
scaffold0125 (308-395)||(28528-28614)
[»] scaffold1800 (1 HSPs)
scaffold1800 (274-388)||(552-663)
[»] scaffold0070 (1 HSPs)
scaffold0070 (372-433)||(11193-11261)
[»] scaffold0032 (1 HSPs)
scaffold0032 (308-435)||(61790-61922)
[»] scaffold0676 (1 HSPs)
scaffold0676 (369-436)||(2918-2992)
[»] scaffold0213 (1 HSPs)
scaffold0213 (280-397)||(19157-19272)
[»] scaffold0145 (1 HSPs)
scaffold0145 (292-335)||(8086-8129)
[»] scaffold0120 (1 HSPs)
scaffold0120 (292-335)||(29273-29316)
[»] scaffold0016 (1 HSPs)
scaffold0016 (46-137)||(17799-17893)
[»] scaffold0300 (1 HSPs)
scaffold0300 (83-159)||(14015-14092)
[»] scaffold0113 (1 HSPs)
scaffold0113 (352-436)||(35512-35593)
[»] scaffold1186 (1 HSPs)
scaffold1186 (286-436)||(1976-2123)
[»] scaffold0328 (1 HSPs)
scaffold0328 (369-432)||(18586-18655)
[»] scaffold0175 (1 HSPs)
scaffold0175 (369-436)||(8679-8745)
[»] scaffold0100 (1 HSPs)
scaffold0100 (369-436)||(26581-26649)
[»] scaffold0005 (1 HSPs)
scaffold0005 (286-436)||(186145-186292)
[»] scaffold1941 (1 HSPs)
scaffold1941 (369-436)||(175-241)
[»] scaffold0802 (1 HSPs)
scaffold0802 (369-436)||(4658-4724)
[»] scaffold0628 (1 HSPs)
scaffold0628 (369-408)||(1034-1073)
[»] scaffold0594 (1 HSPs)
scaffold0594 (236-279)||(2146-2189)
[»] scaffold0485 (1 HSPs)
scaffold0485 (34-73)||(4457-4496)
[»] scaffold0308 (1 HSPs)
scaffold0308 (375-436)||(13483-13544)
[»] scaffold0555 (1 HSPs)
scaffold0555 (372-408)||(8722-8758)


Alignment Details
Target: chr1 (Bit Score: 162; Significance: 3e-86; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 236 - 436
Target Start/End: Complemental strand, 14792709 - 14792511
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  14792709 tcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcgaaacctattaacaactacaaggttaaaccctttttca 14792610  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14792609 ggattacatacttatgattaaagaaggttag--tcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttctctt 14792512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 236 - 423
Target Start/End: Original strand, 18121509 - 18121694
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  18121509 tcatcggattatctactctttttacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaaggttaaatcctttttca 18121608  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctct 423  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  18121609 ggattacatacttatgattaaagaaggtta--atcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctct 18121694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 44892355 - 44892553
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||    
T  44892355 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaatatcaaaacctattaacaactacaaggttaaatcctttttca 44892454  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
     ||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  44892455 agattacatacttatgattaaagaaggttag--tcccacccttaacttaggttagatgatcgcaaggttctaccgctttctcttctccgactcttctctt 44892552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 244 - 435
Target Start/End: Complemental strand, 38887225 - 38887037
Alignment:
Q  244 ttatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattaca 343  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38887225 ttatctactctttctacgatcacttttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaagattaaaccctttttcaggattaca 38887126  T
Q  344 tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||| |  |||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||    
T  38887125 tacttatgattaaagaaggttagttt--cacccttaccttaggttagatgatcacaagtttctaccgctttctcttctc-gactcttctctt 38887037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 41225600 - 41225441
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||| |||||||||| ||||    
T  41225600 tcatcggattatctactctttctacattcaattttagtttcaaaccctaactctacaacatcaaaacctattatcaactgcaaggttaaaccctttttca 41225501  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  41225500 ggattacatacttatgattaaagaaggttag--tcccacccttaccttaaattagatgatcg 41225441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 41226853 - 41226694
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||| |||||||||| ||||    
T  41226853 tcatcggattatctactctttctacattcaattttagtttcaaaccctaactctacaacatcaaaacctattatcaactgcaaggttaaaccctttttca 41226754  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  41226753 ggattacatacttatgattaaagaaggttag--tcccacccttaccttaaattagatgatcg 41226694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 302 - 395
Target Start/End: Complemental strand, 21243838 - 21243746
Alignment:
Q  302 cctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccctta-ccttagattagatgat 395  Q
    |||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  21243838 cctattaacaactacaaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtct--cacccttacccttagattagatgat 21243746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 278 - 436
Target Start/End: Complemental strand, 24719615 - 24719459
Alignment:
Q  278 aaccttaatt-ctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacc 375  Q
    |||||||||| ||| ||||||||||| || ||||||||||||| |||||||||| ||||| |||| | | |  || |||| |||| | |||||   ||||    
T  24719615 aaccttaatttctataacatcaaaac-taataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc---cacc 24719520  T
Q  376 cttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24719519 cttaccataggttagatgatcgcaaggttctaccgctttctcttctctgactcttctcttc 24719459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 16058329 - 16058255
Alignment:
Q  369 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||    
T  16058329 tcccacccttaccttagattagatgatcggactctacaagattctaccactttctcttctctgactcttctcttc 16058255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 39061275 - 39061375
Alignment:
Q  284 aattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttacctt 383  Q
    ||||||| ||||||||||| ||| |||||||||||| ||||||| || ||||| |||| ||||| ||||||| ||||||||||  |||||| ||||||||    
T  39061275 aattctataacatcaaaac-tatcaacaactacaaggttaaaccttttttcagaattatatactcatgattacagaaggttag--tcccactcttacctt 39061371  T
Q  384 agat 387  Q
    ||||    
T  39061372 agat 39061375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 388
Target Start/End: Complemental strand, 21188138 - 21188030
Alignment:
Q  277 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 376  Q
    |||||| | ||||| ||||||||||| ||| ||||||||||| |||||| ||||  |||  |||| ||||| ||||||||| ||||||||  ||||||||    
T  21188138 aaacctaacttctataacatcaaaac-tatcaacaactacaaaattaaatcctttctcaaaattatatactcatgattaaaaaaggttag--tcccaccc 21188042  T
Q  377 ttaccttagatt 388  Q
    ||||||||||||    
T  21188041 ttaccttagatt 21188030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 372 - 436
Target Start/End: Original strand, 51324544 - 51324608
Alignment:
Q  372 cacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||   |||||||||| ||||||||||||||||||||||  ||||||||||    
T  51324544 cacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctggttcttctcttc 51324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 21243883 - 21243841
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaa 278  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  21243883 tcatcggattatctactctttctacaatcaattttagtttcaa 21243841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 423
Target Start/End: Complemental strand, 24723366 - 24723312
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctct 423  Q
    ||||||||||||||||||||   |||||||||| |||||||||||||||||||||    
T  24723366 tcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 24723312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 11808288 - 11808187
Alignment:
Q  272 gtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcc 371  Q
    |||||||| | |||||||  |||||||||||||||||||||||||||| |||||             |||||||||||||||||||||||||||||||      
T  11808288 gtttcaaatcctaattctgaaacatcaaaacctattaacaactacaaggttaaa-------------ttacatacttatgattaaagaaggttagtct-- 11808204  T
Q  372 cacccttaccttagatt 388  Q
    |||||||||||| ||||    
T  11808203 cacccttaccttggatt 11808187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 8306510 - 8306577
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaa-ttctacaacatcaaaac 302  Q
    ||||||||||| |||||||||| || |||||||||| ||||||||| ||| ||||| |||||||||||    
T  8306510 tcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaac 8306577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 17901948 - 17901905
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaa 279  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  17901948 tcatcggattatctactctttcaacaatcaattttagtttcaaa 17901905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 40390112 - 40390155
Alignment:
Q  292 aacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  40390112 aacatcaaaacctattaacaactacaaggttaaaccctttttca 40390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 21168972 - 21169038
Alignment:
Q  371 ccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||| | ||||  |||| ||||||  |||||||||||||||||||||||||||    
T  21168972 ccacccttaccttagattggttgattacaaggttctacgagctttctcttctctgactcttctcttc 21169038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 6834074 - 6834118
Alignment:
Q  235 atcatcggattatctactctttctacgatcaattttagtttcaaa 279  Q
    |||||||||||| |||||||||| || ||||||||||||||||||    
T  6834074 atcatcggattacctactctttcaacaatcaattttagtttcaaa 6834118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 21239189 - 21239146
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaa 279  Q
    ||||||||||| |||||||||| || ||||||||||||||||||    
T  21239189 tcatcggattacctactctttcaacaatcaattttagtttcaaa 21239146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 16025342 - 16025420
Alignment:
Q  83 acttcatttagcacaattagcattt-gaga-gattaatcatttacgcctagttaatccacttttcatgtatacatatca 159  Q
    ||||||||||  ||||||||||||| |||| |||||||||||||| ||||  |||||||| ||||| || |||||||||    
T  16025342 acttcatttaatacaattagcattttgagatgattaatcatttacacctaactaatccacatttcaagtttacatatca 16025420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 341
Target Start/End: Original strand, 12710814 - 12710877
Alignment:
Q  278 aaccttaatt-ctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggatta 341  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||| ||||| ||||    
T  12710814 aaccttaatttctataacatcaaaac-taacaacaactacaagattaaaccctttttcagaatta 12710877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 161; Significance: 1e-85; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 236 - 435
Target Start/End: Original strand, 8727 - 8924
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  8727 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaaccgattaacatctacaaggttaaaccctttttca 8826  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8827 ggattacatacttatgattaaagaaggttag--tcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttctctt 8924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 2e-81; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 22557154 - 22557351
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  22557154 tcatcggattatctactctttctacgatcaattttagtttcaaacccgaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 22557253  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  22557254 ggattacatacttatga-taaagaaggtta--ctcccacccttaccttaggttagatgatcgcaaggttctactgctttctcttctctgactcttctctt 22557350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 236 - 435
Target Start/End: Complemental strand, 7217389 - 7217193
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  7217389 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaa-cctattaacaactacaaggttaaaccctttttca 7217291  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  7217290 ggattacatacttatgattaaagaaggttagtct--cacccttaccttaggctagatgatcgcaaggttctaccgctttctcttttctgactcttctctt 7217193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 236 - 436
Target Start/End: Complemental strand, 23431593 - 23431388
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  23431593 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattagcaactacaaggttaaaccctttttca 23431494  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactc 428  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  23431493 ggattacatacttatgattaaagaaggttag--tcccacgcttaccttagattagatgatcggactctacaagattctaccgctttctcttctctgactc 23431396  T
Q  429 ttctcttc 436  Q
    ||||||||    
T  23431395 ttctcttc 23431388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 236 - 436
Target Start/End: Complemental strand, 18455219 - 18455021
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||    
T  18455219 tcatcggattatctactctttctactatcaattctagtttcaaaccctaattctacaatatcaaaacctattaacaactacaaggttaaaacctttttca 18455120  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  18455119 ggattacatacttatgattaaagaaggtta--ctcccacccttaccttaggttagatgatcacaaggttctaccgctttctcttctctaactcttctctt 18455022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 236 - 397
Target Start/End: Original strand, 25921907 - 25922066
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |    
T  25921907 tcatcagattatttactctttctacaatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttta 25922006  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  25922007 ggattacatacttatgattaaataaggttag--tcccacccttaccttagattagatgatcg 25922066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 32259751 - 32259948
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| |||||| ||| ||||    
T  32259751 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacttattaaaaactacaaggttaaactctttttca 32259850  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||||||||  || ||||||||||| ||||| |||   || | || ||||||||||||||| |||| |||||||||||    
T  32259851 ggattacatacttatgattaaagaaggttag--tcacacccttacctaagatt-gatcgacgaaggactctaccgctttctctcctctaactcttctctt 32259947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 236 - 385
Target Start/End: Original strand, 31734613 - 31734760
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||| ||||    
T  31734613 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattttacaacatcaaaacctattaacaactgcaaggttaaaccctttttca 31734712  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    | |||||||||||||||||||||||||||||  |||||||||||||||||    
T  31734713 gaattacatacttatgattaaagaaggttag--tcccacccttaccttag 31734760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 23657994 - 23658099
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  23657994 tcatcggattatctactctttctacaatcaattttagtttcaaacccttattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 23658093  T
Q  336 ggatta 341  Q
    | ||||    
T  23658094 gaatta 23658099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 1818909 - 1819008
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||| ||||| | || ||||| |||||||||||||||||||||  ||||||||||||||    
T  1818909 ttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtct--cacccttaccttag 1819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 21683090 - 21683023
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||| ||||||||||||||| | |||| |||||||||||||||||||||||||||    
T  21683090 tcccacccttaccttaggttagatgatcgcaaggtcctacagctttctcttctctgactcttctcttc 21683023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 25601406 - 25601326
Alignment:
Q  307 taacaactacaa-gattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    |||||||||||| | |||||||||| ||||| ||||||| ||||||||||| ||||||||||||  | |||||||||||||||    
T  25601406 taacaactacaaaggttaaaccctttttcagaattacattcttatgattaatgaaggttagtct--ctcccttaccttagatt 25601326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 28948597 - 28948679
Alignment:
Q  352 attaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||| |||| |||||||||  ||||||||||||||||   |||||||||| ||||| |||||||| ||||||| |||||||||||    
T  28948597 attagagaaagttagtctc--acccttaccttagattgattgatcgcaaggttctatcgctttcttttctctggctcttctcttc 28948679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 394
Target Start/End: Original strand, 31166230 - 31166302
Alignment:
Q  320 attaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatga 394  Q
    ||||||||||| ||||| |||| | ||| ||||||||||| |||||||||  ||||||||||||||||| |||||    
T  31166230 attaaaccctttttcagaattatagactcatgattaaagatggttagtct--cacccttaccttagattggatga 31166302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 18459253 - 18459362
Alignment:
Q  277 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttctt-caggattacatacttatgattaaagaaggttagtctcccacc 375  Q
    |||||| | ||||| ||||||||||| | |||| ||||| || ||||||||||| || ||| || | ||||| |||||||||| |||||||||  |||||    
T  18459253 aaacctaacttctataacatcaaaac-tgttaaaaactataaaattaaacccttttttcagaatcatatactcatgattaaagtaggttagtc--ccacc 18459349  T
Q  376 cttaccttagatt 388  Q
    |||||||||||||    
T  18459350 cttaccttagatt 18459362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 29045170 - 29045213
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaa 279  Q
    ||||||||||| |||||||||| || ||||||||||||||||||    
T  29045170 tcatcggattacctactctttcaacaatcaattttagtttcaaa 29045213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 436
Target Start/End: Complemental strand, 19167866 - 19167800
Alignment:
Q  371 ccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||| | ||||  |||| ||||||  |||||||||||||||||| ||||||||    
T  19167866 ccacccttaccttagattggttgattacaaggttctacaagctttctcttctctgacttttctcttc 19167800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 13285767 - 13285809
Alignment:
Q  349 atgattaaagaaggttagtctcccacccttaccttagattagatg 393  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||    
T  13285767 atgattatagaaggttagtc--ccacccttaccttagattagatg 13285809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 18982371 - 18982439
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgatta 355  Q
    ||||||| ||||||||| ||| ||||||||||| ||||||||||| ||||| |  | |||||||||||||    
T  18982371 ttctacagcatcaaaac-tatcaacaactacaaaattaaaccctttttcagaaccatatacttatgatta 18982439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 18982609 - 18982677
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttc 436  Q
    ||||||| ||||||||||||   ||||  |||| ||||||  |||||||||||||||||||||||||||    
T  18982609 tcccaccgttaccttagattgattgattacaaggttctacaagctttctcttctctgactcttctcttc 18982677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 24506220 - 24506157
Alignment:
Q  277 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggatta 341  Q
    |||||| | ||||| ||||||||||| ||| ||||||||||| ||||||||||| ||||| ||||    
T  24506220 aaacctaacttctataacatcaaaac-tatcaacaactacaaaattaaaccctttttcagaatta 24506157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 2e-81; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 236 - 436
Target Start/End: Complemental strand, 19566064 - 19565866
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  19566064 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 19565965  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||||||   |||||||||| ||||||||||||||||||||| |||||||||||    
T  19565964 ggattacatacttatgattaaagaaggttag--taccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctcttactcttctctt 19565867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 236 - 432
Target Start/End: Original strand, 46741105 - 46741299
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  46741105 tcatcggattatccactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaaccaattaacaactacaaggttaaaccctttttca 46741204  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttct 432  Q
    |||||||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  46741205 ggattacatatttatgattaaagaaggttag--tcccacacttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttct 46741299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 236 - 423
Target Start/End: Original strand, 12623222 - 12623407
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  12623222 tcatcgcattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 12623321  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctct 423  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||||   |||||||||| |||||||||||||||||||||    
T  12623322 ggattacatacctatgattaaagaaggttag--tcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 12623407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 236 - 436
Target Start/End: Complemental strand, 33243440 - 33243235
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  33243440 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaagattaaaccctatttca 33243341  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactc 428  Q
     |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||| |       |||||||||| |||||||||||||| |||||    
T  33243340 agattacatacttatgattaaagaatgttagtct--cacccttaccttagattagatgatgggactctacaagattctaacgctttctcttctccgactc 33243243  T
Q  429 ttctcttc 436  Q
    ||||||||    
T  33243242 ttctcttc 33243235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 236 - 395
Target Start/End: Original strand, 40230212 - 40230369
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  40230212 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaatgttaaaccctttttca 40230311  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgat 395  Q
     |||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  40230312 agattacatacttatgattaaagaaagttag--tcccacccttaccttagattagatgat 40230369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 236 - 388
Target Start/End: Complemental strand, 44023749 - 44023599
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||| |||||||||| ||||    
T  44023749 tcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctactaacaagtacaaggttaaaccctttttca 44023650  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
     ||||||||||||||||||||||||||||||  || |||||||||||||||||    
T  44023649 agattacatacttatgattaaagaaggttag--tcgcacccttaccttagatt 44023599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 33186808 - 33186913
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  33186808 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaaccacaaggttaaaccctttttca 33186907  T
Q  336 ggatta 341  Q
    | ||||    
T  33186908 gaatta 33186913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 12424439 - 12424345
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaaccctt 330  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  12424439 tcatcggattatctactctttctacgatcaattttagttccaaaccctaattctacaacatcaaaacctattaacaactacaaagttaaaccctt 12424345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 321 - 436
Target Start/End: Complemental strand, 26921570 - 26921457
Alignment:
Q  321 ttaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttc 420  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||||  | ||||||||||||| |||||||||| |||| || |||||||||||||||    
T  26921570 ttaaaccctttttcagaattacatacttatgattaatgaaggttagtc--ctacccttaccttaggttagatgatcacaaggttataccgctttctcttc 26921473  T
Q  421 tctgactcttctcttc 436  Q
    ||||||||||||||||    
T  26921472 tctgactcttctcttc 26921457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 286 - 436
Target Start/End: Complemental strand, 2424483 - 2424335
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||| ||||||||||| || |||||||||||||||||||||||| ||||  |||| | | ||||  |||| |||| |||||||||  ||||||||||||    
T  2424483 ttctataacatcaaaac-taataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctc--acccttacctta 2424387  T
Q  385 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    | ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  2424386 ggttagatgatcgcaaggttctaacgctttctcttctctgactcttctcttc 2424335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 388
Target Start/End: Original strand, 18462929 - 18463079
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattt-tagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttc 334  Q
    |||| |||||| |||| ||||| || ||||| || || ||| |||||| | || || ||||||||||| ||||||||||||||| ||||||||||| |||    
T  18462929 tcattggattacctacactttcaacaatcaaattgtaatttaaaacctaacttttataacatcaaaac-tattaacaactacaaaattaaaccctttttc 18463027  T
Q  335 aggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    || |||| ||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  18463028 agaattatatactcatgattaaagaaggttag--tcccacctttaccttagatt 18463079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 355687 - 355784
Alignment:
Q  83 acttcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatccacttttcatgtatacatatcatagccaaatcaatcatcatt 179  Q
    ||||||||||||| || |||| ||||| | |||||||||||||||||||| |||||||| ||||| |||||||||||||||| |||| ||||||||||    
T  355687 acttcatttagcaaaactagcctttgaaacgattaatcatttacgcctagctaatccacatttcaagtatacatatcatagcaaaattaatcatcatt 355784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 436
Target Start/End: Original strand, 26446163 - 26446311
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||| ||||||||||| ||  |||||||||||||||||||| || ||||| |||| | | |  || |||| |||| | |||||  | |||||||| |||    
T  26446163 ttctataacatcaaaac-taacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtc--ctacccttacttta 26446259  T
Q  385 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    | ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  26446260 ggttagatgatcgcaaggttctaccgctctctcttctctgactcttctcttc 26446311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 14477588 - 14477687
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    ||||| ||||||||||| ||| ||| |||||||||| |||||||| ||||| |||| ||||| ||||||||||||||||||  | |||||||||||||||    
T  14477588 ttctataacatcaaaac-tatcaacgactacaagatcaaaccctttttcagaattatatactcatgattaaagaaggttag--tgccacccttaccttag 14477684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 13165089 - 13165188
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    ||||| ||||||||||| |||||||||||| || ||||| ||||| ||||  ||   ||||| ||||||||||||||||||  |||||||||||||||||    
T  13165089 ttctataacatcaaaac-tattaacaactataaaattaacccctttttcacaatcctatactcatgattaaagaaggttag--tcccacccttaccttag 13165185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 45314144 - 45314096
Alignment:
Q  321 ttaaacccttcttcaggattacatacttatgattaaagaaggttagtct 369  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  45314144 ttaaaccctttttcagaattacatacttatgattaatgaaggttagtct 45314096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 16296777 - 16296844
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaa-ttctacaacatcaaaac 302  Q
    ||||||||||| |||||||||| || |||||||||| ||||||||| ||| ||||| |||||||||||    
T  16296777 tcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaac 16296844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 355557 - 355602
Alignment:
Q  10 catcatcactttatatatgtatactcatcatcaaaaatcatcatca 55  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||    
T  355557 catcatcactttatatatgtatactcgtcataaaaaatcaccatca 355602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 436
Target Start/End: Original strand, 14631091 - 14631238
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||| ||||| |||| | | |  || |||| |||| | |||||||  ||||||||||||    
T  14631091 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctc--acccttacctta 14631187  T
Q  385 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  14631188 gatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 14631238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 26014295 - 26014360
Alignment:
Q  341 acatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctac 408  Q
    ||||||| | |||||  |||||||||||  ||||||||||||||||||||||||||| ||| ||||||    
T  26014295 acatactcaagattattgaaggttagtc--ccacccttaccttagattagatgatcggaaggttctac 26014360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 9638987 - 9639075
Alignment:
Q  308 aacaactacaagattaaacccttcttcaggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    |||||||||||| |||||||||| ||||| ||||||  ||| || |||| |||| | |||  |||||||||||||||||||||||| ||||    
T  9638987 aacaactacaaggttaaaccctttttcagaattacacaactcattattagagaaagctag--tcccacccttaccttagattagattatcg 9639075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 16296975 - 16297041
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  16296975 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 16297041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 20150787 - 20150830
Alignment:
Q  292 aacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||    
T  20150787 aacatcaaaacctattaacaactacaaggttaaatcctttttca 20150830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 15115293 - 15115325
Alignment:
Q  404 tctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||| |||||||||||||||||    
T  15115293 tctaccgctttctctcctctgactcttctcttc 15115325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 37019741 - 37019773
Alignment:
Q  404 tctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||| |||||||||||||||||    
T  37019741 tctaccgctttctctcctctgactcttctcttc 37019773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 150; Significance: 4e-79; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 4327 - 4525
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || |||     
T  4327 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccttttttcg 4426  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||||    
T  4427 ggattatatacttatgattaaagaaggttag--tcccacccttaccttaggttagatgatcgcaaggttgtaccgctttctcttctgtgactcttctctt 4524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 150; Significance: 4e-79; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 236 - 436
Target Start/End: Complemental strand, 10074 - 9876
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||  ||||||||| ||||    
T  10074 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattagaaactacaaggctaaaccctttttca 9975  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    | |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  9974 gaattacatacttatgattaaagaaggttag--tcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctccgactcttctctt 9877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 4e-79; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 236 - 436
Target Start/End: Complemental strand, 14025953 - 14025755
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  14025953 tcatcggattatctactctttctacgatcaattgtagtttcaaaccctaattatacaacatcaaaatctattaacaactacaaggttaaaccctttttca 14025854  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||||||    
T  14025853 ggattacatacttatgattaaagaaggttag--tcccacccttaccttagattagatgatcgcaaggttctaccgctttcttttctttgattcttctctt 14025756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 236 - 435
Target Start/End: Complemental strand, 8833352 - 8833155
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  8833352 tcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactataaggttaaaccctttttca 8833253  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  8833252 ggattacatacttatgattaaagaaggtcag--tcccacccttaccctaggttagatgatcgcaaggttctacagctttctcttctctgactcttctctt 8833155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 26749938 - 26750135
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||| ||||||||||||||| || ||| ||||||||||||||||||| |||||||||||||||| |||||||| | ||||    
T  26749938 tcatcggattatctactctttctatgatcaattttagttttaaccct-aattctacaacatcaaaacttattaacaactacaaggttaaaccccttttca 26750036  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||| ||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |||    
T  26750037 ggattatatacttatgattaaaaaaggttagtct--cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctaactcttccctt 26750134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 8504034 - 8503875
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  8504034 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaactcttgttca 8503935  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||| ||||||| ||||    
T  8503934 ggattacatacttatgattgaagaaggttag--tcccacccttaccttatattagataatcg 8503875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 236 - 385
Target Start/End: Original strand, 26762308 - 26762455
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  26762308 tcatcgaattatttactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 26762407  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  26762408 ggattacataattatgattaaagaaggttag--tcccacccttaccttag 26762455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 1627017 - 1626868
Alignment:
Q  283 taattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttacct 382  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||  || |||||||||||    
T  1627017 taattttacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttag--tcacacccttacct 1626920  T
Q  383 tagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||| |||||| |||||||| ||||||||||||||||  ||||||||||||||||    
T  1626919 taggttagataatcgcaaggttctaccgctttctct--tctgactcttctcttc 1626868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 374 - 436
Target Start/End: Original strand, 660830 - 660892
Alignment:
Q  374 cccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  660830 cccttaccttaggttagatgatcgcaaggttctaccgctttctcttctccgactcttctcttc 660892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 21504096 - 21504195
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    ||||| ||||||||||| || ||||||||||||  |||||||||| ||||| |  | ||||||||||||||||||||||||  ||||||| |||||||||    
T  21504096 ttctataacatcaaaac-tactaacaactacaaacttaaaccctttttcagaaccatatacttatgattaaagaaggttag--tcccacctttaccttag 21504192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 436
Target Start/End: Complemental strand, 20197648 - 20197606
Alignment:
Q  394 atcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20197648 atcgcaagattctaccgctttctcttctctgactcttctcttc 20197606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 21300059 - 21299989
Alignment:
Q  369 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttct 432  Q
    ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  21300059 tcccacccttaccttagattagatgatcagactctacaagattctaccgctttctcttctctgactcttct 21299989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 23374666 - 23374572
Alignment:
Q  46 atcatcatcaaacatttaccacatcaaataagtagcaact--tcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatc 137  Q
    |||||||||||||||||||||||||||| ||  | ||  |  |||||||||| || |||||||| ||| |||||||||||||| |||||||||||    
T  23374666 atcatcatcaaacatttaccacatcaaagaatcaacatatgttcatttagcaaaaatagcattttagacgattaatcatttacacctagttaatc 23374572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 24068191 - 24068234
Alignment:
Q  292 aacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  24068191 aacatcaaaacctattaacaactacaaggttaaaccctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 397
Target Start/End: Original strand, 19921680 - 19921709
Alignment:
Q  368 ctcccacccttaccttagattagatgatcg 397  Q
    ||||||||||||||||||||||||||||||    
T  19921680 ctcccacccttaccttagattagatgatcg 19921709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 397
Target Start/End: Complemental strand, 21398659 - 21398631
Alignment:
Q  369 tcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||    
T  21398659 tcccacccttaccttagattagatgatcg 21398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 21404080 - 21404141
Alignment:
Q  325 acccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    |||||| ||||| |||| | ||| ||||||||||||||||||  ||||| ||||||||||||||    
T  21404080 accctttttcagaattatagactcatgattaaagaaggttag--tcccatccttaccttagatt 21404141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 4e-79; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 236 - 435
Target Start/End: Complemental strand, 53646205 - 53646001
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  53646205 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 53646106  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatc-------gcaagattctaccgctttctcttctctgactc 428  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  53646105 ggattacatatttatgattaaagaaggttag--tcccacccttaccttagattagatgatcagactctacaagattctaccgctttctcttctctgactc 53646008  T
Q  429 ttctctt 435  Q
    |||||||    
T  53646007 ttctctt 53646001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 236 - 368
Target Start/End: Complemental strand, 54330453 - 54330321
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  54330453 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 54330354  T
Q  336 ggattacatacttatgattaaagaaggttagtc 368  Q
    ||||||||||||||||||||||||| |||||||    
T  54330353 ggattacatacttatgattaaagaaagttagtc 54330321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 236 - 336
Target Start/End: Complemental strand, 14152546 - 14152446
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  14152546 tcatcggattatctactctttatacaatcaattttagtttcaaaccctaattctacaacatcaaaacctactaacaactacaaggttaaaccctttttca 14152447  T
Q  336 g 336  Q
    |    
T  14152446 g 14152446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 236 - 335
Target Start/End: Original strand, 5215552 - 5215651
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  5215552 tcatcggattatctactctatctacaatcaattttagttttaaaccctaattctacaacatcaaaacctattaataactacaaggttaaaccctttttca 5215651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 293 - 436
Target Start/End: Original strand, 15566706 - 15566855
Alignment:
Q  293 acatcaaaacctattaacaactacaagattaaacccttcttcaggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattaga 391  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||| |  |||||  |||| |||| |||||  |||||||||||| |||||||| |    
T  15566706 acatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttag--tcccacccttactttagattaca 15566803  T
Q  392 tgatcg-------caagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||       |||||||||||||||||||||||||||||||||||||||    
T  15566804 tgatcggactcaacaagattctaccgctttctcttctctgactcttctcttc 15566855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 277 - 388
Target Start/End: Complemental strand, 21845756 - 21845648
Alignment:
Q  277 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 376  Q
    |||||| | ||||| ||||||||||| |||||||||||||||| |||||||||| ||||| | || ||||||||||||||||||||||||  ||||||||    
T  21845756 aaacctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatacttatgattaaagaaggttag--tcccaccc 21845660  T
Q  377 ttaccttagatt 388  Q
    ||||||||||||    
T  21845659 ttaccttagatt 21845648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 48631288 - 48631387
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||| ||||| | || ||| ||||||||||||||||||||  |||||||||||||||||    
T  48631288 ttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatatttatgattaaagaaggttag--tcccacccttaccttag 48631384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 511789 - 511652
Alignment:
Q  45 aatcatcatcaaacatttaccacatcaaataagtagca--acttcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatccact 141  Q
    ||||||||| |||||| |||  |||||| || ||| ||  ||||||||||||||||||||| ||||| | ||||||||||||||| |||| ||||||||     
T  511789 aatcatcataaaacatatacttcatcaagtaggtaacatcacttcatttagcacaattagcctttgaaacgattaatcatttacgtctagctaatccaca 511690  T
Q  142 tttcatgtatacatatcatagccaaatcaatcatcatt 179  Q
    ||||| |||| ||||||||||| |||| ||||||||||    
T  511689 tttcaagtatgcatatcatagctaaattaatcatcatt 511652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 15566418 - 15566486
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacct 304  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||| ||||| ||| ||||||||||||    
T  15566418 tcatcagattatctactatttctacgatcaattttagttttaaaccctaattttaccacatcaaaacct 15566486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 427
Target Start/End: Complemental strand, 24548966 - 24548911
Alignment:
Q  372 cacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgact 427  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||    
T  24548966 cacccttactttaggttagatgatcgcaaggttctaccgctttctcttctctgact 24548911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 50350866 - 50350803
Alignment:
Q  332 ttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    ||||| |||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  50350866 ttcagaattatatactcatgattaaagaaggttagtc--ccacccttaccttagattagatgatcg 50350803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 388
Target Start/End: Complemental strand, 3160731 - 3160623
Alignment:
Q  277 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 376  Q
    |||||| | ||||| || |||||||| ||| |||||||||||  |||||||| | || || |||| ||||| |||||||||||||||||||||  |||||    
T  3160731 aaacctaatttctataatatcaaaac-tatcaacaactacaaagttaaacccatttttagaattatatactcatgattaaagaaggttagtct--caccc 3160635  T
Q  377 ttaccttagatt 388  Q
    ||||||||||||    
T  3160634 ttaccttagatt 3160623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 422
Target Start/End: Original strand, 24547243 - 24547290
Alignment:
Q  375 ccttaccttagattagatgatcgcaagattctaccgctttctcttctc 422  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  24547243 ccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 24547290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 6820237 - 6820275
Alignment:
Q  398 caagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6820237 caagattctaccgctttctcttctctgactcttctcttc 6820275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 436
Target Start/End: Original strand, 6159445 - 6159516
Alignment:
Q  372 cacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||||||||||||       ||||||| |||||||||||||||||| ||||||||||||    
T  6159445 cacccttaccttagattagatgatcggactctacaagattataccgctttctcttctctaactcttctcttc 6159516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 11563747 - 11563828
Alignment:
Q  352 attaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||| ||| |||||| |  ||||||||||||  ||||||||||    
T  11563747 attagagaaggttagtc--ccacccttaccttagattagatgatcggaaggttctacag-gttctcttctctggttcttctcttc 11563828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 17518888 - 17518814
Alignment:
Q  369 tcccacccttaccttagattagatgatcgca-------agattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||| |||||||||||||||||| |       |||||||||||||||||||||| ||| ||||||||||    
T  17518888 tcccacccttgccttagattagatgatcggactctagaagattctaccgctttctcttctatgattcttctcttc 17518814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 17533750 - 17533676
Alignment:
Q  369 tcccacccttaccttagattagatgatcgca-------agattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||| |||||||||||||||||| |       |||||||||||||||||||||| ||| ||||||||||    
T  17533750 tcccacccttgccttagattagatgatcggactctagaagattctaccgctttctcttctatgattcttctcttc 17533676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 6156747 - 6156813
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  6156747 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 6156813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 35960943 - 35960877
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  35960943 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 35960877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 40808033 - 40808099
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  40808033 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 40808099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 44274455 - 44274521
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  44274455 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 44274521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 45803483 - 45803440
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaa 279  Q
    ||||||||||| |||||||||| || ||||||||||||||||||    
T  45803483 tcatcggattacctactctttcaacaatcaattttagtttcaaa 45803440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 511870 - 511825
Alignment:
Q  10 catcatcactttatatatgtatactcatcatcaaaaatcatcatca 55  Q
    |||| ||||||||||||||||||||| |||| |||||||| |||||    
T  511870 catcgtcactttatatatgtatactcgtcataaaaaatcaccatca 511825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 10289882 - 10289923
Alignment:
Q  97 aattagcatttgaga-gattaatcatttacgcctagttaatc 137  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  10289882 aattagcatgtgagatgattaatcatttacgcctagttaatc 10289923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 397
Target Start/End: Complemental strand, 14641563 - 14641535
Alignment:
Q  369 tcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||    
T  14641563 tcccacccttaccttagattagatgatcg 14641535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 33565158 - 33565190
Alignment:
Q  404 tctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||| |||||||||||||||||    
T  33565158 tctaccgctttctctcctctgactcttctcttc 33565190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 397
Target Start/End: Original strand, 49900767 - 49900795
Alignment:
Q  369 tcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||    
T  49900767 tcccacccttaccttagattagatgatcg 49900795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 146; Significance: 9e-77; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 251 - 449
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  251 tcatcggattatctactctttctactataaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 350  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||| ||| |||  |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  351 ggattacatacttatgattaaagaagattaatct--cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttttctgactattctctt 448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 9e-77; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 236 - 436
Target Start/End: Complemental strand, 17978562 - 17978364
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  17978562 tcatcggattatctgctctttctataatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaatcctttttca 17978463  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17978462 ggattacatacttatgattatagaagtttag--tcccacccttaccttagtttagatgatcgcaaggttctaccgctttctcttctctgactcttctctt 17978365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 22474662 - 22474860
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  22474662 tcatcagattatctactctttcgacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 22474761  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||   |||||||||| ||||||||||||||||||| |||||||||||||    
T  22474762 ggattacatacttatgattaaagaaggttag--tcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctttgactcttctctt 22474859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 12037310 - 12037151
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  12037310 tcatcggattatctactctttctacaatcaattttagtttcaaaccctgattctacaacatcaaaagctattaacaactacaaggttaaaccctttttca 12037211  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||| ||||||||||||    
T  12037210 ggattacatacttatgattaaacaaggttag--tcccacccttaccttatattagatgatcg 12037151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 21579352 - 21579193
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  21579352 tcatcggattatctactctttctacaatcaattttagtttcgaaccctaattctacaacatcaaaacatattaacaactacaaggttaaaccctttttca 21579253  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||||||    
T  21579252 ggattacatacttatgattaaagaaggttag--tcacacccttaccttaaattagatgatcg 21579193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 29763014 - 29762855
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||| |||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  29763014 tcatcgcattatctactctttctacaatcaattttagtttcaaactctaattctacaacatcaaaacttattaacaactacaaggttaaaccctttttca 29762915  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  29762914 ggattacatacttatgattaaagaaggttagttt--cacccttaccttaaattagatgatcg 29762855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 236 - 385
Target Start/End: Complemental strand, 41680279 - 41680132
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  |||    
T  41680279 tcatcggattatctactccttctacagtcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttatca 41680180  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  41680179 ggattacatacttatgattaaagaaggttag--tcccacctttaccttag 41680132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 236 - 397
Target Start/End: Original strand, 22208174 - 22208334
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  22208174 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 22208273  T
Q  336 ggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    | |||| |  ||  || |||| |||| | |||  |||||||||||||||||||||||||||||    
T  22208274 gaattatacaacccattattagagaaagctag--tcccacccttaccttagattagatgatcg 22208334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 257 - 435
Target Start/End: Complemental strand, 36405257 - 36405085
Alignment:
Q  257 ctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcagg-attacatacttatgatta 355  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  36405257 ctacaatcaattttagtttcaaaccataattctacgacatcaaaacctattaacaactacaaggttaaaccctt-ttcagggattacatacttatgatta 36405159  T
Q  356 aagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    ||||| |||||  || |||||||||||||||||   |||||||||| ||||| ||    ||||| |||||||||||||||    
T  36405158 aagaaagttag--tcacacccttaccttagattgattgatcgcaaggttctatcg----ctcttttctgactcttctctt 36405085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 22258453 - 22258293
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| | |||||||||||||||||||||||| ||||||| |||| |||||||||| ||      
T  22258453 tcatcggattatctactctttctacaatcagttttagtttcaaaacctaattctacaacatcaaaacctatcaacaactgcaaggttaaacccttttttg 22258354  T
Q  336 ggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    | |||| |  ||| || |||| |||| | ||||||  ||||||||||||| ||||||||||||    
T  22258353 gaattatacaactcattattagagaaagctagtct--cacccttaccttaaattagatgatcg 22258293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 436
Target Start/End: Complemental strand, 4380713 - 4380565
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||| ||||| |||| | | ||||  |||| |||| |||||||  ||||||||||||||    
T  4380713 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtc--ccacccttacctta 4380617  T
Q  385 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    | ||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  4380616 ggttagatgatcgcaaggttctacggctttctcttctccgactcttctcttc 4380565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 372 - 436
Target Start/End: Complemental strand, 36732424 - 36732360
Alignment:
Q  372 cacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36732424 cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttctcttc 36732360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 5761570 - 5761637
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  5761570 tcccacccttaccttaggttagatgatcgcaaggttctaccgttttctcttctctgactcttcccttc 5761637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 21514728 - 21514795
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  21514728 tcccacccttaccttaagttagatgatcgcaaggttctaccgctttctcttctccgactcttctcttc 21514795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 22317926 - 22317859
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||||||   |||||||||| |||||||||||||||| |||||||||||||||||    
T  22317926 tcccacccttaccttagattgattgatcgcaaggttctaccgctttctctcctctgactcttctcttc 22317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 20879435 - 20879528
Alignment:
Q  292 aacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    |||||||||||| ||||| ||||||||| |||||||||| || || |  | ||||||||||||||||||||||||  ||||||||||||||||||||    
T  20879435 aacatcaaaacc-attaataactacaagcttaaacccttttttagaaccatatacttatgattaaagaaggttag--tcccacccttaccttagatt 20879528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 22532147 - 22532080
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||||||   ||||||| || ||||| || |||||||||||||||||||||||||    
T  22532147 tcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctgactcttctcttc 22532080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 22536832 - 22536765
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||||||   ||||||| || ||||| || |||||||||||||||||||||||||    
T  22536832 tcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctgactcttctcttc 22536765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 408
Target Start/End: Complemental strand, 20022055 - 20022016
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctac 408  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  20022055 tcccacccttaccttagattagatgatcggaagattctac 20022016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 20517080 - 20517032
Alignment:
Q  338 attacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  20517080 attatatacttatgattaaagaaggttag--tcccacccttaccttagatt 20517032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 22966772 - 22966815
Alignment:
Q  292 aacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  22966772 aacatcaaaacctattaacaactacaaggttaaaccctttttca 22966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 42265524 - 42265457
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||| ||||   |||||||||| ||| |||||||||| || ||||||||||||||||    
T  42265524 tcccacccttaccttggattgattgatcgcaaggttccaccgctttcttttatctgactcttctcttc 42265457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 20397525 - 20397457
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||| | ||||  |||| ||||||  |||||||||||| ||||||||||||||    
T  20397525 tcccacccttaccttagattggttgattacaaggttctacaagctttctcttctatgactcttctcttc 20397457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 330
Target Start/End: Complemental strand, 21697550 - 21697512
Alignment:
Q  292 aacatcaaaacctattaacaactacaagattaaaccctt 330  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  21697550 aacatcaaaacctattaacaactacaatgttaaaccctt 21697512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 38989707 - 38989739
Alignment:
Q  404 tctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||| |||||||||||||||||    
T  38989707 tctaccgctttctctactctgactcttctcttc 38989739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 39020804 - 39020836
Alignment:
Q  404 tctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||| |||||||||||||||||    
T  39020804 tctaccgctttctctactctgactcttctcttc 39020836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 138; Significance: 6e-72; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 8969 - 9166
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8969 tcatcgcattatatactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaagattaaaccctttttca 9068  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||   || | || ||||||||||||||| ||||||||||||||||    
T  9069 ggattacatacttatgattaaagaaggttag--tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctctt 9165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 138; Significance: 6e-72; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 236 - 432
Target Start/End: Original strand, 33360 - 33554
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  33360 tcatcggattatctactatttcaacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacacgtttaaaccctttttca 33459  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttct 432  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||    
T  33460 ggattaaatacttatgattaaagaaggttag--tcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctgactcttct 33554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 6e-72; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 14317978 - 14318175
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  14317978 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactgcaaggttaaaccctttttca 14318077  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||||| |||   || | || ||||||||||||||||||||||||||||||||    
T  14318078 ggattacatacttatgattaaagaaggtt--tgtcccacccttaccttagatt-gatcgacgaaggactctaccgctttctcttctctgactcttctctt 14318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 14161002 - 14160843
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | ||||    
T  14161002 tcatcgaattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccccttttca 14160903  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||    
T  14160902 ggattacatacttatgattaaagaaggttag--tcccacccttatcttaaattagatgatcg 14160843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 236 - 368
Target Start/End: Complemental strand, 9743225 - 9743093
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  9743225 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacttattaacaactacaaggttaaaccctttttca 9743126  T
Q  336 ggattacatacttatgattaaagaaggttagtc 368  Q
    |||||||||||||||||||||||||||||||||    
T  9743125 ggattacatacttatgattaaagaaggttagtc 9743093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 236 - 385
Target Start/End: Complemental strand, 15119453 - 15119306
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  15119453 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaatctattaacaactacaaggttaaaccctttttca 15119354  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
     ||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  15119353 agattacatacttatgattaaagaaggttag--tcctacccttaccttag 15119306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 43276890 - 43276731
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || ||||    
T  43276890 tcatcggattatttactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccatt-ttca 43276792  T
Q  336 ggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    | |||| |  ||  || |||| |||| |||||  |||||||||||||||| ||||||||||||    
T  43276791 gaattatacaacccattattagagaaagttag--tcccacccttaccttaaattagatgatcg 43276731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 436
Target Start/End: Complemental strand, 4690759 - 4690611
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||| ||||||||||  || ||||||||||||| |||||||||| ||||| |||| | | ||||  |||| |||| |||||||  ||||| ||||||||    
T  4690759 ttctataacatcaaaag-taataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtc--ccacctttacctta 4690663  T
Q  385 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    | ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  4690662 ggttagatgatcgcaaggttctatcgctttctcttctctgactcttctcttc 4690611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 436
Target Start/End: Original strand, 43745612 - 43745760
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||| ||||  |||| | | || || |||| |||| | |||||  ||||||||||||||    
T  43745612 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtc--ccacccttacctta 43745708  T
Q  385 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43745709 ggttagatgatcgcaaggttctaccgctttctcttctctgactcttctcttc 43745760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 8513898 - 8513806
Alignment:
Q  239 tcggattatctactcttt-ctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaaccctt 330  Q
    |||||||||||||||||| |||| || | ||||||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  8513898 tcggattatctactcttttctacaattagttttagtttcaaaccctaattctacagcatcaaaacctataaacaactacaaggttaaaccctt 8513806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 434
Target Start/End: Complemental strand, 48212739 - 48212677
Alignment:
Q  372 cacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctct 434  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  48212739 cacccttaccttaggttagatgatcgcaaggttctaccactttctcttctctgactcttctct 48212677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 388
Target Start/End: Complemental strand, 42565907 - 42565829
Alignment:
Q  308 aacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    ||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||| |||||||  |||||||||||||||||    
T  42565907 aacaactacaagattaaaccctttttcagaattatatatttatgattaaagaagattagtct--cacccttaccttagatt 42565829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 8135275 - 8135187
Alignment:
Q  345 acttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    ||||| |||||  |||||||||||||  ||||||||||||||||   ||||| |||| |||||||||||| ||||||||| ||||||||||    
T  8135275 acttaggattagtgaaggttagtctc--acccttaccttagattgattgatcacaaggttctaccgctttatcttctctggctcttctctt 8135187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 388
Target Start/End: Original strand, 33060383 - 33060494
Alignment:
Q  274 ttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctccca 373  Q
    ||||||||| | |||||  |||||||||  ||| |||||| |||| ||||||||||| | ||| |||| | ||| ||||||||||||||||||  |||||    
T  33060383 ttcaaacctaacttctattacatcaaaat-tataaacaacaacaaaattaaacccttttccagaattatagactcatgattaaagaaggttag--tccca 33060479  T
Q  374 cccttaccttagatt 388  Q
    |||||||||||||||    
T  33060480 cccttaccttagatt 33060494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 8488194 - 8488147
Alignment:
Q  283 taattctacaacatcaaaacctattaacaactacaagattaaaccctt 330  Q
    |||||||||| ||||||||||||| |||||||| ||| ||||||||||    
T  8488194 taattctacagcatcaaaacctataaacaactataaggttaaaccctt 8488147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 20214184 - 20214250
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||||   || || | || ||||||||||||||| |||||||||||||||||    
T  20214184 tcccacccttaccttagattaatcga-cgaaggactctaccgctttctctcctctgactcttctcttc 20214250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 435
Target Start/End: Complemental strand, 24269962 - 24269895
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||| | ||||  |||| ||||||  |||||||||||||||||||| |||||    
T  24269962 tcccacccttaccttagattggttgattacaaggttctacaagctttctcttctctgactctcctctt 24269895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 47095489 - 47095555
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||||||   ||| || | || ||||||||||||||| |||||||||||||||||    
T  47095489 tcccacccttaccttagattgattga-cgaaggactctaccgctttctctcctctgactcttctcttc 47095555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 415
Target Start/End: Complemental strand, 15095652 - 15095606
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttc 415  Q
    ||||||||||||||||||||   |||||||||| |||||||||||||    
T  15095652 tcccacccttaccttagattgattgatcgcaaggttctaccgctttc 15095606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 436
Target Start/End: Complemental strand, 13132349 - 13132285
Alignment:
Q  371 ccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  13132349 ccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 13132285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 397
Target Start/End: Complemental strand, 58428 - 58400
Alignment:
Q  369 tcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||    
T  58428 tcccacccttaccttagattagatgatcg 58400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 397
Target Start/End: Complemental strand, 12127178 - 12127150
Alignment:
Q  369 tcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||    
T  12127178 tcccacccttaccttagattagatgatcg 12127150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 436
Target Start/End: Complemental strand, 14180379 - 14180347
Alignment:
Q  404 tctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||| |||||||||||||||||    
T  14180379 tctaccgctttctctcctctgactcttctcttc 14180347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 397
Target Start/End: Original strand, 19195648 - 19195676
Alignment:
Q  369 tcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||    
T  19195648 tcccacccttaccttagattagatgatcg 19195676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 56882 - 57077
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||   |||| ||||    
T  56882 tcatcgaattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacatctacaaggtta---cctttttca 56978  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 435  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  56979 ggattacatacttatgattaaagaaggttag--tcccacccttaccttaggttatatgatcgccaggttctaccactttctcttctctgactcttctctt 57076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 236 - 385
Target Start/End: Original strand, 174127 - 174274
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  174127 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 174226  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    |||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  174227 ggattacatacttatgattaaagaaggttag--tcccacccttactttag 174274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 5e-63; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 236 - 436
Target Start/End: Complemental strand, 23968769 - 23968571
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| || ||||    
T  23968769 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacgactacaaggttaaaccttttttca 23968670  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagat-gatcgcaagattctaccgctttctcttctctgactcttctct 434  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| |  | ||| ||| | | || ||||||||||||||| |||||||||||||||    
T  23968669 ggattacatacttatgattaaagaaggttagtct--cacccttacctttggattgatcgat-gaaggactctaccgctttctctcctctgactcttctct 23968573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 14179874 - 14179715
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| |||||||||| || |||  |||||| || ||||    
T  14179874 tcatcagattatctactctttctacaatcaattttagtttcaaaccctaattccacaacatcaaaatctattaacaagtataaggataaaccttttttca 14179775  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  14179774 ggattacatactcatgattaaagaaggttag--tcccacccttaccttatattagatgatcg 14179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 236 - 397
Target Start/End: Complemental strand, 14183612 - 14183453
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||| || |||  |||| | || ||||    
T  14183612 tcatcggattatctaccctttctacaatcaattttagtttcaaaccctaattccacaacatcaaaacctattaacaagtataaggataaatcttttttca 14183513  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 397  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  14183512 ggattacatactcatgattaaagaaggttag--tcccacccttaccttaaattagatgatcg 14183453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 236 - 380
Target Start/End: Original strand, 24717925 - 24718067
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||||||||||| |||| |||||| |||||||| | ||||    
T  24717925 tcatcggattatctactctttctacaatcaattttagtttcaaacccgaattctgcaacatcaaaacctattgacaaatacaaggttaaaccccttttca 24718024  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttac 380  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||    
T  24718025 ggattacatacttatgattaaagaatgttag--tcccacccttac 24718067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 19647206 - 19647289
Alignment:
Q  303 ctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||  ||||| |||||||||||    
T  19647206 ctattaacaactacaagattaaaccctttttcagaattatatacttatgattaaagaaggttagtct--cacccataccttagatt 19647289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 19201230 - 19201148
Alignment:
Q  352 attaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||| |||| |||||||||  ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  19201230 attagagaaagttagtctc--acccttaacttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttcccttc 19201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 388
Target Start/End: Complemental strand, 20006078 - 20005967
Alignment:
Q  274 ttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctccca 373  Q
    ||||||||| | ||||| ||||||||||  |||||||||| |||| ||||||||||| ||||| |||| | ||| |||||||||||||| |||  |||||    
T  20006078 ttcaaacctaacttctataacatcaaaat-tattaacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggctag--tccca 20005982  T
Q  374 cccttaccttagatt 388  Q
    |||||||||||||||    
T  20005981 cccttaccttagatt 20005967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 22502008 - 22502082
Alignment:
Q  369 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||    
T  22502008 tcccacccttaccttagattagatgatcggactctacaagattctaccgctttctcttttctgactcttctcttc 22502082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 22509942 - 22510016
Alignment:
Q  369 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||    
T  22509942 tcccacccttaccttagattagatgatcggactctacaagattctaccgctttctcttttctgactcttctcttc 22510016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 388
Target Start/End: Complemental strand, 28652648 - 28652548
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaa-gattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||| ||||||||||| ||  ||||||||||| |  ||||||||| ||||| ||||||||||||||||||| |||||||||  ||||||||||||||||    
T  28652648 ttctataacatcaaaac-taacaacaactacaaaggctaaaccctttttcagaattacatacttatgattaatgaaggttag--tcccacccttacctta 28652552  T
Q  385 gatt 388  Q
    ||||    
T  28652551 gatt 28652548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 23610663 - 23610730
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||| ||||||| ||||||| |||||||| |||||||||||| | ||||||||||    
T  23610663 tcccacccttaccttaggttagatgttcgcaaggttctaccgttttctcttctctaattcttctcttc 23610730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 432
Target Start/End: Complemental strand, 149514 - 149446
Alignment:
Q  371 ccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttct 432  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  149514 ccacccttaccttagattagatgatcggactctacaagattctaccgctttctcttctctgactcttct 149446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 436
Target Start/End: Complemental strand, 12626488 - 12626367
Alignment:
Q  321 ttaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattag-atgatcg-------caagattctaccgct 412  Q
    |||||||||| ||||| |||| | |||||||||||| |||||||||  |||||||||||||||| ||| | |||||||       |||||||||||| ||    
T  12626488 ttaaaccctttttcagaattatacacttatgattaatgaaggttag--tcccacccttaccttacatttgaatgatcggactctacaagattctaccact 12626391  T
Q  413 ttctcttctctgactcttctcttc 436  Q
    |||||||||| |||||||||||||    
T  12626390 ttctcttctccgactcttctcttc 12626367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 388
Target Start/End: Original strand, 45535903 - 45535981
Alignment:
Q  308 aacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    |||||| |||||||||||||||| ||||| |||| | |||  |||||||||||||||||  ||||||||||||||||||||    
T  45535903 aacaacaacaagattaaaccctttttcagaattatagactcgtgattaaagaaggttag--tcccacccttaccttagatt 45535981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 423
Target Start/End: Complemental strand, 18388214 - 18388151
Alignment:
Q  358 gaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctct 423  Q
    |||||||||||||  ||||||||||||||||   |||||||||| |||||||||||||||||||||    
T  18388214 gaaggttagtctc--acccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 18388151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 43938684 - 43938779
Alignment:
Q  45 aatcatcatcaaacatttaccacatcaaataagtagca--acttcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatc 137  Q
    ||||||||||||||||||||||||||||| ||||| ||   |||||||||||| || || ||||| ||| |||||| ||||||| |||||| ||||    
T  43938684 aatcatcatcaaacatttaccacatcaaagaagtaacatctcttcatttagcaaaaataacattttagacgattaaccatttacacctagtcaatc 43938779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 149652 - 149585
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaa-ttctacaacatcaaaac 302  Q
    ||||||||||| |||||||||| || |||||||||| ||||||||| ||| ||||| |||||||||||    
T  149652 tcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaac 149585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 365
Target Start/End: Complemental strand, 25584358 - 25584280
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggtta 365  Q
    ||||| ||||||||||| ||| | |||| ||||| |||||||||| ||||| |||| ||||| |||||||||||||||||    
T  25584358 ttctataacatcaaaac-tatcatcaacgacaaggttaaaccctttttcagaattatatactcatgattaaagaaggtta 25584280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 12626578 - 12626527
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaatt 287  Q
    ||||||||||| |||||||||| || |||||||||||||||||| | |||||    
T  12626578 tcatcggattacctactctttcaacaatcaattttagtttcaaaacctaatt 12626527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 24516223 - 24516289
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  24516223 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 24516289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 397
Target Start/End: Original strand, 17307523 - 17307551
Alignment:
Q  369 tcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||    
T  17307523 tcccacccttaccttagattagatgatcg 17307551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 397
Target Start/End: Original strand, 21369330 - 21369358
Alignment:
Q  369 tcccacccttaccttagattagatgatcg 397  Q
    |||||||||||||||||||||||||||||    
T  21369330 tcccacccttaccttagattagatgatcg 21369358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 436
Target Start/End: Original strand, 22260082 - 22260142
Alignment:
Q  376 cttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||   ||||||||||| ||||||| |||||||  |||||||||| |||||    
T  22260082 cttaccttagattgattgatcgcaagactctaccgttttctctcttctgactcttttcttc 22260142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 118; Significance: 5e-60; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 236 - 388
Target Start/End: Original strand, 62624 - 62774
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  62624 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaaccacaaggttaaaccctttttca 62723  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  62724 ggattacatacttatgattaaagaaggttagtct--catccttaccttagatt 62774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 236 - 385
Target Start/End: Complemental strand, 10592 - 10445
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  10592 tcatcgtattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaatgttaaaccctttttca 10493  T
Q  336 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  10492 ggattacatacttatgattaaagaaggttag--tcccacccttaccttag 10445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 385
Target Start/End: Original strand, 3853 - 3927
Alignment:
Q  308 aacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    |||||||||| | ||||| |||| |||||||||||||||||||| |||||||||||| |  || ||||||||||||||    
T  3853 aacaactacatg-ttaaatcctttttcaggattacatacttatgtttaaagaaggttgg--tcacacccttaccttag 3927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 236 - 436
Target Start/End: Original strand, 6322 - 6522
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaaca-tcaaaacctattaacaactacaagattaaacccttcttc 334  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||| ||||| |||    
T  6322 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacattaaaaacctataaacaactacaagattaatccctttttc 6421  T
Q  335 aggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctc 433  Q
    || ||||||  ||| || |||| |||| | ||||||   ||||||||||||||||   |||||||||| ||||||||||||||||||||||| |||||||    
T  6422 agaattacacaactcattattagagaaagctagtct--tacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctgaatcttctc 6519  T
Q  434 ttc 436  Q
    |||    
T  6520 ttc 6522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 236 - 330
Target Start/End: Original strand, 5536 - 5630
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaaccctt 330  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  5536 tcatcggattatctactctttctacgatcaattttagttccaaaccctaattctacaacatcaaaacctattaacaactacaaagttaaaccctt 5630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 433
Target Start/End: Complemental strand, 6514 - 6371
Alignment:
Q  287 tctacaacatcaaaacctattaacaactacaa-gattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    |||| ||||||||||| ||  ||||||||||| | |||||||||| || || ||||||||||||||||||| |||||||||||  |||||||||||||||    
T  6514 tctataacatcaaaac-taacaacaactacaaaggttaaacccttttt-agaattacatacttatgattaatgaaggttagtc--ccacccttaccttag 6419  T
Q  386 attagatgatcgcaagattctaccgctttctcttctctgactcttctc 433  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||    
T  6418 gttagatgatcgcaaggttctaccgctttctcttctctgactcttctc 6371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1437 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1437
Description:

Target: scaffold1437; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 236 - 355
Target Start/End: Complemental strand, 440 - 321
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    ||||||||||||||| ||||| || |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||  |||||||||| ||      
T  440 tcatcggattatctaatctttttatgatcaattttagtttccaaccttaattttacaacatcaaaacctattaacaactacaatgttaaacccttttttt 341  T
Q  336 ggattacatacttatgatta 355  Q
    |||| |||||||||||||||    
T  340 ggatgacatacttatgatta 321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 590 - 683
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaaccct 329  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||    
T  590 tcatcggattatatactctttctatgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaatgttaaaccct 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 236 - 330
Target Start/End: Original strand, 20105 - 20199
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaaccctt 330  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  20105 tcatcggattatctattctttctacaatcaattttaatttcaaaccctaattctaaaacatcaaaacctattaacaactacaaggttaaaccctt 20199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 236 - 388
Target Start/End: Complemental strand, 38588 - 38438
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattt-tagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttc 334  Q
    |||| |||||| |||| ||||| || ||||| || || ||| |||||| | ||||| ||||||||||| ||||||||||||||| ||||||||||| |||    
T  38588 tcattggattacctacactttcaacaatcaaattgtaatttaaaacctaacttctataacatcaaaac-tattaacaactacaaaattaaaccctttttc 38490  T
Q  335 aggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    || |||| ||||| ||||||||||||||||||  || |||||||||||||||||    
T  38489 agaattatatactcatgattaaagaaggttag--tcacacccttaccttagatt 38438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 59; Significance: 8e-25; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 236 - 298
Target Start/End: Original strand, 169346 - 169408
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatca 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  169346 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatca 169408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 390
Target Start/End: Original strand, 17078 - 17163
Alignment:
Q  303 ctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattag 390  Q
    |||| |||||||||||  |||||||||| || || |||| ||||| ||||||||||||| || |  ||||||||||||||||||||||    
T  17078 ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcg--tcccacccttaccttagattag 17163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 390
Target Start/End: Original strand, 26609 - 26694
Alignment:
Q  303 ctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattag 390  Q
    |||| |||||||||||  |||||||||| || || |||| ||||| ||||||||||||| || |  ||||||||||||||||||||||    
T  26609 ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcg--tcccacccttaccttagattag 26694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 372 - 436
Target Start/End: Original strand, 18315 - 18379
Alignment:
Q  372 cacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18315 cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttctcttc 18379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 28686 - 28769
Alignment:
Q  303 ctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    |||||||||||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||  |||||| |||||||||||||    
T  28686 ctattaacaactacaagattaaacgctttttcagaattatatacttatgattaaagaaggttag--tcccactcttaccttagatt 28769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 390
Target Start/End: Original strand, 31877 - 31987
Alignment:
Q  277 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 376  Q
    |||||| | ||||||||||||||||| |||||||||||| || ||||||||||| ||||| || | ||||| ||||||||||| |||||||||  |||||    
T  31877 aaacctaacttctacaacatcaaaac-tattaacaactataaaattaaaccctttttcagaatcatatactcatgattaaagatggttagtct--caccc 31973  T
Q  377 ttaccttagattag 390  Q
    ||||||||||||||    
T  31974 ttaccttagattag 31987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 32038 - 32100
Alignment:
Q  320 attaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||||||||| ||||| || | ||||| ||||||||||||||||||   |||||||||||||||    
T  32038 attaaaccctttttcagaatcatatactcatgattaaagaaggttag--ccccacccttacctta 32100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 286 - 440
Target Start/End: Complemental strand, 18036 - 17877
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||| ||||||||||| ||  |||||||||||| ||||| |||| ||||| |||| | | ||||  |||| |||| |||||||  ||||||||||||||    
T  18036 ttctataacatcaaaac-taacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtc--ccacccttacctta 17940  T
Q  385 gattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttccctt 440  Q
    |||||||||||||       ||||||||||||| |||||||||||||||||||||||||||||    
T  17939 gattagatgatcggattctacaagattctaccgttttctcttctctgactcttctcttccctt 17877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 3152 - 3260
Alignment:
Q  277 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 376  Q
    |||||| | ||||| ||||||||||| ||| ||||||||||| ||||||||||| ||||  |||| ||||| ||||||||||||||||||  ||||||||    
T  3152 aaacctaacttctataacatcaaaac-tatcaacaactacaaaattaaaccctttttcataattatatactcatgattaaagaaggttag--tcccaccc 3248  T
Q  377 ttaccttagatt 388  Q
    ||||||||||||    
T  3249 ttaccttagatt 3260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 436
Target Start/End: Original strand, 49686 - 49834
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 385  Q
    ||||| ||||||||||| ||| |||||  | || ||||||||||| ||||| ||||   ||| ||||||||||||||||||||  |||||||||||||||    
T  49686 ttctataacatcaaaac-tatcaacaaaaataaaattaaaccctttttcagaattatggactcatgattaaagaaggttagtc--ccacccttaccttag 49782  T
Q  386 attagatgatcgcaagattctacc-gctttctcttctctgactcttctcttc 436  Q
    ||| | ||||  |||| ||||||  |||||||||||||||||||||||||||    
T  49783 attggttgattacaaggttctacaagctttctcttctctgactcttctcttc 49834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 23561 - 23669
Alignment:
Q  277 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 376  Q
    |||||| | ||||| ||||||||||| ||||||||||||||| ||||||||||| || || |||| ||||| ||||||||||||||| ||  ||||||||    
T  23561 aaacctaacttctataacatcaaaac-tattaacaactacaaaattaaacccttttttagaattatatactcatgattaaagaaggtcag--tcccaccc 23657  T
Q  377 ttaccttagatt 388  Q
    ||||||||||||    
T  23658 ttaccttagatt 23669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 26764 - 26831
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||| ||||||   |||||||||| |||||||||||||||||||||  ||| |||||||    
T  26764 tcccacccttaccgtagattgattgatcgcaaggttctaccgctttctcttctctagctcatctcttc 26831  T

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Target: scaffold0004 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 328303 - 328236
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  328303 tcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctcactcttcccttc 328236  T

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Target: scaffold0103 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 30436 - 30532
Alignment:
Q  83 acttcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatccacttttcatgtatacatatcatagccaaatcaatcatcatt 179  Q
    ||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||| ||| | ||||||||||| ||||||||| || |||||||    
T  30436 acttcatttattacaattagcatttgaaacgattaatcatttacgcctagttaatccacattt-aagtatacatatcgtagccaaattaaccatcatt 30532  T

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Target: scaffold1256 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 308 - 422
Target Start/End: Complemental strand, 2275 - 2162
Alignment:
Q  308 aacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattct 406  Q
    |||||||||||| |||||||||| ||||| |||| | | ||||  |||| ||||  ||||||  ||||||||||||||| ||||||||||||||| ||||    
T  2275 aacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtc--ccacccttaccttaggttagatgatcgcaaggttct 2178  T
Q  407 accgctttctcttctc 422  Q
    ||||||||||||||||    
T  2177 accgctttctcttctc 2162  T

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Target: scaffold0516 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 308 - 422
Target Start/End: Complemental strand, 5380 - 5267
Alignment:
Q  308 aacaactacaagattaaacccttcttcaggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattct 406  Q
    |||||||||||| |||||||||| || || |||| |  |||||  |||| |||| |||||  ||||||||||||||||| ||||||||||||||| ||||    
T  5380 aacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttag--tcccacccttaccttaggttagatgatcgcaaggttct 5283  T
Q  407 accgctttctcttctc 422  Q
    ||||||||||||||||    
T  5282 accgctttctcttctc 5267  T

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Target: scaffold0516; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 369 - 422
Target Start/End: Complemental strand, 5223 - 5170
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctc 422  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  5223 tcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 5170  T

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Target: scaffold1939 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 386
Target Start/End: Original strand, 38 - 181
Alignment:
Q  241 ggattatctactctttctacgatcaatttt-agtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggat 339  Q
    |||||| |||||||||| || ||||||||| | ||| || ||| | ||||| ||||||||||| |||||||||||||||  | |||||||| ||||| |     
T  38 ggattacctactctttcaacaatcaattttcaattttaaccctaacttctataacatcaaaac-tattaacaactacaaattaaaaccctttttcagaac 136  T
Q  340 tacatacttatgattaaagaaggttagtctcccacccttaccttaga 386  Q
     | ||||| ||||||||||||||||||  ||||||||||||||||||    
T  137 catatactaatgattaaagaaggttag--tcccacccttaccttaga 181  T

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Target: scaffold0007 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 158837 - 158770
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||||||   |||||||||| || |||||||||||||||||||||||||||||||    
T  158837 tcccacccttaccttagattgattgatcgcaaggttttaccgctttctcttctctgactcttctcttc 158770  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 18716 - 18648
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttc 436  Q
    ||||||||| |||||||||| | ||||  |||| ||||||  ||||||||||||||||||||| |||||    
T  18716 tcccaccctcaccttagattggttgattacaaggttctacaagctttctcttctctgactcttttcttc 18648  T

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Target: scaffold0394 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 388
Target Start/End: Complemental strand, 7618 - 7510
Alignment:
Q  277 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 376  Q
    |||||| | ||||| ||||||||||| ||| |||||||| || ||||||||||| ||||| || | ||||| || |||||||||||||||  ||||||||    
T  7618 aaacctaacttctataacatcaaaac-tatcaacaactataaaattaaaccctttttcagaatcatatactcataattaaagaaggttag--tcccaccc 7522  T
Q  377 ttaccttagatt 388  Q
    ||||||||||||    
T  7521 ttaccttagatt 7510  T

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Target: scaffold0111 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 12548 - 12474
Alignment:
Q  369 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||| |||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  12548 tcccacccttaccttggattagatgatcggactctacaagattctaccgctttctcttctctgactcttctcttc 12474  T

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Target: scaffold0058 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 388
Target Start/End: Complemental strand, 59760 - 59652
Alignment:
Q  277 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 376  Q
    |||||| | ||||| || |||||||| ||| |||||||||||  |||||||||| ||||| |||| ||||| ||||||||||||||||||   |||||||    
T  59760 aaacctaatttctataatatcaaaac-tatcaacaactacaaagttaaaccctttttcagaattatatactcatgattaaagaaggttag--acccaccc 59664  T
Q  377 ttaccttagatt 388  Q
    ||||||||||||    
T  59663 ttaccttagatt 59652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 388
Target Start/End: Complemental strand, 2029 - 1947
Alignment:
Q  304 tattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 388  Q
    |||||||||| |||| ||||||||||| ||||| |||| | ||| ||||||||||||||||||  ||||||| ||||||||||||    
T  2029 tattaacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggttag--tcccaccgttaccttagatt 1947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 28528 - 28614
Alignment:
Q  308 aacaactacaa-gattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgat 395  Q
    ||||||||||| | |||||||||| ||||| |||| ||||| |||||||| |||||||||  |||||| ||||||||||||||||||||    
T  28528 aacaactacaaaggttaaaccctttttcagaattatatactcatgattaaggaaggttag--tcccactcttaccttagattagatgat 28614  T

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Target: scaffold1800 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 388
Target Start/End: Original strand, 552 - 663
Alignment:
Q  274 ttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctccca 373  Q
    ||||||||| | ||||| ||||||||||  ||| |||||| |||| |||||||| || || || |||| | ||| ||||||||||||||||||  |||||    
T  552 ttcaaacctaacttctataacatcaaaat-tatcaacaacaacaaaattaaaccatttttaagaattatagactcatgattaaagaaggttag--tccca 648  T
Q  374 cccttaccttagatt 388  Q
    |||||||||||||||    
T  649 cccttaccttagatt 663  T

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Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 433
Target Start/End: Original strand, 11193 - 11261
Alignment:
Q  372 cacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctc 433  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  11193 cacccttaccttagattagatgatcggactctacaagattctaccgctttctcgtctctgactcttctc 11261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 435
Target Start/End: Complemental strand, 61922 - 61790
Alignment:
Q  308 aacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg-------ca 399  Q
    |||||||||||| ||||| |||| ||||| |||| | | ||||  |||| |||| |||||||||  |||||||||||||||||||||||||       ||    
T  61922 aacaactacaaggttaaatcctt-ttcagaattatacaacttagaattagagaaagttagtctc--acccttaccttagattagatgatcggattctaca 61826  T
Q  400 agattctaccgctttctcttctctgactcttctctt 435  Q
    ||||||||||||||||| ||||||||||||| ||||    
T  61825 agattctaccgctttcttttctctgactcttatctt 61790  T

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Target: scaffold0676 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 2918 - 2992
Alignment:
Q  369 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||||||||| ||||||        ||||||||||||| |||||||||||||||||||||||||    
T  2918 tcccacccttaccttagattaaatgatcagactctacaagattctaccgttttctcttctctgactcttctcttc 2992  T

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Target: scaffold0213 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 397
Target Start/End: Original strand, 19157 - 19272
Alignment:
Q  280 ccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattaca-tacttatgattaaagaaggttagtctcccaccctt 378  Q
    ||||| ||||| ||||||||||| || ||||||||||||| |||||||||| ||||| |||| |  |||||  |||| |||| |||||  ||||||||||    
T  19157 ccttatttctataacatcaaaac-taataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttag--tcccaccctt 19253  T
Q  379 accttagattagatgatcg 397  Q
    || ||||||||||| ||||    
T  19254 acgttagattagatcatcg 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 8086 - 8129
Alignment:
Q  292 aacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  8086 aacatcaaaacctattaacaactacaaggttaaaccctttttca 8129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 29273 - 29316
Alignment:
Q  292 aacatcaaaacctattaacaactacaagattaaacccttcttca 335  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  29273 aacatcaaaacctattaacaactacaaggttaaaccctttttca 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 17799 - 17893
Alignment:
Q  46 atcatcatcaaacatttaccacatcaaataagtagcaact--tcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatc 137  Q
    |||||||||||||||||||||||||||| ||  | ||  |  |||||||||| || |||||||| ||| |||||||||||||| |||||||||||    
T  17799 atcatcatcaaacatttaccacatcaaagaatcaacatatgttcatttagcaaaaatagcattttagacgattaatcatttacacctagttaatc 17893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 14092 - 14015
Alignment:
Q  83 acttcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatccacttttcatgtatacatatca 159  Q
    |||||||||| || ||||||||||  ||| ||||||||||||| ||||||||||||||| ||||| || | |||||||    
T  14092 acttcatttaacaaaattagcattaaagacgattaatcatttatgcctagttaatccacatttcaggtttgcatatca 14015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 35512 - 35593
Alignment:
Q  352 attaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||| |||| |||||||||  |||||||||||||||| ||| |||| | || ||||||||||||||  |||||||||||||||||    
T  35512 attagagaaagttagtctc--acccttaccttagatt-gatcatcgaaggactctaccgctttctcacctctgactcttctcttc 35593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 436
Target Start/End: Original strand, 1976 - 2123
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||| ||||| |||| | | |  || |||| |||| | |||||||  ||||||||||||    
T  1976 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctc--acccttacctta 2072  T
Q  385 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  2073 gatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 2123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 18655 - 18586
Alignment:
Q  369 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttct 432  Q
    |||||||||||||||||||||||||||||       |||||||||  ||||||||||||||||||||||||    
T  18655 tcccacccttaccttagattagatgatcggactctacaagattct-tcgctttctcttctctgactcttct 18586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 8679 - 8745
Alignment:
Q  369 tcccacccttaccttagattagat-gatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||| ||| ||| | |||| ||||||||||||||| |||||||||||||||||    
T  8679 tcccacccttaccttagatt-gatcgat-gtaagactctaccgctttctctcctctgactcttctcttc 8745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 26649 - 26581
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttc 436  Q
    |||||||||||| ||||||| | ||||  |||| ||||||  |||||||||||||||||||||||||||    
T  26649 tcccacccttactttagattggttgattacaaggttctacaagctttctcttctctgactcttctcttc 26581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 436
Target Start/End: Complemental strand, 186292 - 186145
Alignment:
Q  286 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 384  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||| ||||| |||| | | |  || |||| |||| | |||||||  ||||||||||||    
T  186292 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctc--acccttacctta 186196  T
Q  385 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  186195 gatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 186145  T

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Target: scaffold1941 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 175 - 241
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  175 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 241  T

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Target: scaffold0802 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 4724 - 4658
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  4724 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 4658  T

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Target: scaffold0628 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 408
Target Start/End: Complemental strand, 1073 - 1034
Alignment:
Q  369 tcccacccttaccttagattagatgatcgcaagattctac 408  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  1073 tcccacccttaccttagattagatgatcggaaggttctac 1034  T

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Target: scaffold0594 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 2146 - 2189
Alignment:
Q  236 tcatcggattatctactctttctacgatcaattttagtttcaaa 279  Q
    ||||||||||| |||||||||| || ||||||||||||||||||    
T  2146 tcatcggattacctactctttcaacaatcaattttagtttcaaa 2189  T

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Target: scaffold0485 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 4457 - 4496
Alignment:
Q  34 tcatcatcaaaaatcatcatcaaacatttaccacatcaaa 73  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  4457 tcatcatcaataatcatcatcaaacaattaccacatcaaa 4496  T

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Target: scaffold0308 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 436
Target Start/End: Original strand, 13483 - 13544
Alignment:
Q  375 ccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 436  Q
    ||||||||||||||   ||||||||   || |||| ||||||||||||||||||||||||||    
T  13483 ccttaccttagattgattgatcgcagagttttaccactttctcttctctgactcttctcttc 13544  T

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Target: scaffold0555 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 8758 - 8722
Alignment:
Q  372 cacccttaccttagattagatgatcgcaagattctac 408  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  8758 cacccttaccttagattagatgatcggaaggttctac 8722  T

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