View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6540_high_60 (Length: 231)

Name: NF6540_high_60
Description: NF6540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6540_high_60
NF6540_high_60
[»] chr7 (32 HSPs)
chr7 (12-231)||(30075161-30075378)
chr7 (128-210)||(3511390-3511473)
chr7 (128-210)||(7164251-7164334)
chr7 (128-210)||(12101224-12101307)
chr7 (128-210)||(24792378-24792461)
chr7 (128-210)||(25748554-25748637)
chr7 (128-210)||(30181070-30181153)
chr7 (128-210)||(33359136-33359219)
chr7 (128-210)||(42204222-42204305)
chr7 (128-210)||(42965042-42965125)
chr7 (143-210)||(22649755-22649823)
chr7 (128-210)||(933352-933435)
chr7 (128-210)||(17753667-17753750)
chr7 (128-210)||(48865700-48865783)
chr7 (128-209)||(1803094-1803176)
chr7 (127-210)||(33846569-33846653)
chr7 (145-212)||(37005874-37005942)
chr7 (128-210)||(4347340-4347423)
chr7 (128-210)||(5280927-5281010)
chr7 (128-210)||(15655979-15656062)
chr7 (144-214)||(20163882-20163953)
chr7 (128-210)||(20346555-20346638)
chr7 (128-210)||(32041609-32041692)
chr7 (128-210)||(43068019-43068102)
chr7 (128-198)||(15655458-15655528)
chr7 (128-198)||(16894553-16894623)
chr7 (128-198)||(42673541-42673611)
chr7 (143-212)||(43405085-43405155)
chr7 (143-210)||(4477382-4477450)
chr7 (143-206)||(8630737-8630801)
chr7 (135-210)||(19828337-19828413)
chr7 (143-210)||(36890891-36890959)
[»] chr1 (31 HSPs)
chr1 (127-231)||(5217839-5217943)
chr1 (128-210)||(1168569-1168652)
chr1 (128-210)||(16052162-16052245)
chr1 (128-210)||(25897440-25897523)
chr1 (143-210)||(43905720-43905788)
chr1 (128-210)||(5215451-5215534)
chr1 (128-210)||(26580326-26580409)
chr1 (128-210)||(29078582-29078665)
chr1 (128-210)||(29288215-29288298)
chr1 (128-210)||(38829135-38829218)
chr1 (128-210)||(39260402-39260485)
chr1 (128-210)||(40092557-40092640)
chr1 (128-210)||(46409501-46409584)
chr1 (128-210)||(46761032-46761115)
chr1 (128-210)||(52753203-52753286)
chr1 (128-209)||(51359273-51359355)
chr1 (143-210)||(8079780-8079848)
chr1 (143-210)||(12682886-12682954)
chr1 (143-210)||(13996794-13996862)
chr1 (143-210)||(32671645-32671713)
chr1 (128-210)||(1170500-1170583)
chr1 (128-210)||(2473788-2473871)
chr1 (128-210)||(17587561-17587644)
chr1 (128-210)||(20089537-20089620)
chr1 (128-210)||(26663324-26663407)
chr1 (128-210)||(33510550-33510633)
chr1 (128-210)||(41928551-41928634)
chr1 (128-210)||(52696857-52696940)
chr1 (128-177)||(7145307-7145356)
chr1 (143-210)||(17591754-17591822)
chr1 (143-210)||(49146238-49146306)
[»] chr5 (26 HSPs)
chr5 (125-231)||(25634630-25634735)
chr5 (128-210)||(3386542-3386625)
chr5 (128-210)||(9008113-9008196)
chr5 (128-210)||(16737503-16737586)
chr5 (128-210)||(27679225-27679308)
chr5 (128-210)||(38598506-38598589)
chr5 (128-210)||(1579105-1579188)
chr5 (128-210)||(1605627-1605710)
chr5 (128-210)||(3921650-3921733)
chr5 (128-210)||(8374394-8374477)
chr5 (128-210)||(16069422-16069505)
chr5 (128-210)||(19358595-19358678)
chr5 (128-210)||(33491252-33491335)
chr5 (128-210)||(33991209-33991292)
chr5 (144-210)||(35782716-35782783)
chr5 (146-199)||(19516044-19516097)
chr5 (143-210)||(24105742-24105810)
chr5 (135-210)||(26603006-26603081)
chr5 (128-210)||(1165657-1165740)
chr5 (128-210)||(4121006-4121089)
chr5 (128-210)||(5203041-5203124)
chr5 (128-210)||(20992202-20992285)
chr5 (128-206)||(27025029-27025108)
chr5 (128-210)||(27420927-27421010)
chr5 (128-210)||(31883213-31883296)
chr5 (145-210)||(20992354-20992420)
[»] chr8 (28 HSPs)
chr8 (144-231)||(18683757-18683844)
chr8 (144-231)||(18729319-18729406)
chr8 (129-210)||(34998953-34999035)
chr8 (128-212)||(22260686-22260771)
chr8 (128-210)||(2322068-2322151)
chr8 (128-210)||(14422771-14422854)
chr8 (128-210)||(29938129-29938212)
chr8 (128-210)||(39220324-39220407)
chr8 (128-210)||(4035915-4035998)
chr8 (144-210)||(6144345-6144412)
chr8 (128-210)||(13110472-13110555)
chr8 (128-210)||(18594605-18594688)
chr8 (128-210)||(35118087-35118170)
chr8 (128-210)||(39206654-39206737)
chr8 (128-198)||(34679513-34679583)
chr8 (143-210)||(26783804-26783872)
chr8 (128-210)||(144462-144545)
chr8 (128-210)||(2042580-2042663)
chr8 (23-61)||(2320529-2320568)
chr8 (128-210)||(10836811-10836894)
chr8 (128-210)||(28639350-28639433)
chr8 (128-210)||(33278468-33278551)
chr8 (128-210)||(33287081-33287164)
chr8 (128-210)||(38167211-38167294)
chr8 (144-210)||(40117924-40117991)
chr8 (152-210)||(42571662-42571720)
chr8 (143-210)||(8021787-8021855)
chr8 (143-210)||(34842436-34842504)
[»] chr3 (26 HSPs)
chr3 (128-212)||(42307947-42308032)
chr3 (128-210)||(25494327-25494410)
chr3 (128-210)||(25999451-25999534)
chr3 (128-210)||(38856156-38856239)
chr3 (128-208)||(35643282-35643363)
chr3 (128-210)||(8042670-8042753)
chr3 (128-210)||(21581105-21581188)
chr3 (128-210)||(22175032-22175115)
chr3 (128-210)||(37698185-37698268)
chr3 (128-210)||(44609375-44609458)
chr3 (128-210)||(50528992-50529075)
chr3 (143-210)||(50529830-50529898)
chr3 (128-210)||(54870216-54870299)
chr3 (128-210)||(15520699-15520782)
chr3 (128-210)||(20699212-20699295)
chr3 (128-210)||(20842390-20842473)
chr3 (128-210)||(24835741-24835824)
chr3 (128-210)||(29445551-29445634)
chr3 (144-210)||(32244183-32244250)
chr3 (128-210)||(32359322-32359405)
chr3 (128-210)||(35226510-35226593)
chr3 (128-177)||(2895282-2895331)
chr3 (130-210)||(46452206-46452287)
chr3 (146-210)||(49128112-49128177)
chr3 (128-210)||(15520184-15520267)
chr3 (143-210)||(34700404-34700472)
[»] scaffold0920 (1 HSPs)
scaffold0920 (128-210)||(3776-3859)
[»] scaffold0172 (1 HSPs)
scaffold0172 (128-210)||(10304-10387)
[»] scaffold0167 (1 HSPs)
scaffold0167 (128-210)||(23007-23090)
[»] chr6 (17 HSPs)
chr6 (128-210)||(17261129-17261212)
chr6 (128-210)||(26704395-26704478)
chr6 (128-210)||(30691919-30692002)
chr6 (128-209)||(9459632-9459714)
chr6 (143-210)||(21893523-21893591)
chr6 (128-210)||(52904-52987)
chr6 (128-210)||(1153661-1153744)
chr6 (128-210)||(6086655-6086738)
chr6 (128-210)||(11167308-11167391)
chr6 (128-210)||(26946932-26947015)
chr6 (128-208)||(33464399-33464480)
chr6 (143-210)||(35198351-35198419)
chr6 (128-210)||(2837613-2837696)
chr6 (128-210)||(3955822-3955905)
chr6 (128-210)||(30698985-30699068)
chr6 (128-210)||(34887348-34887431)
chr6 (128-198)||(20726868-20726938)
[»] chr4 (37 HSPs)
chr4 (128-210)||(11639622-11639705)
chr4 (128-210)||(23776503-23776586)
chr4 (128-210)||(40428764-40428847)
chr4 (129-211)||(51780763-51780846)
chr4 (128-210)||(52139269-52139352)
chr4 (128-210)||(54189611-54189694)
chr4 (143-210)||(50353867-50353935)
chr4 (128-210)||(1756808-1756891)
chr4 (128-210)||(2481452-2481535)
chr4 (128-210)||(8591136-8591219)
chr4 (128-210)||(14987858-14987941)
chr4 (144-210)||(27488708-27488775)
chr4 (128-210)||(37968801-37968884)
chr4 (128-210)||(43290004-43290087)
chr4 (128-210)||(45424578-45424661)
chr4 (128-210)||(53717508-53717591)
chr4 (128-212)||(17493397-17493482)
chr4 (143-210)||(38071379-38071447)
chr4 (147-210)||(53353125-53353189)
chr4 (128-210)||(16700847-16700930)
chr4 (128-210)||(20877113-20877196)
chr4 (128-210)||(23704253-23704336)
chr4 (128-210)||(27536148-27536231)
chr4 (128-210)||(28032756-28032839)
chr4 (128-210)||(30171646-30171729)
chr4 (144-210)||(30423624-30423691)
chr4 (128-210)||(31969747-31969830)
chr4 (128-210)||(35490817-35490900)
chr4 (128-210)||(38055223-38055306)
chr4 (144-210)||(47632101-47632168)
chr4 (128-210)||(55344869-55344952)
chr4 (128-198)||(23269090-23269160)
chr4 (128-198)||(40680082-40680152)
chr4 (145-210)||(50053509-50053575)
chr4 (128-177)||(50055145-50055194)
chr4 (143-210)||(37464787-37464855)
chr4 (143-210)||(44784976-44785044)
[»] chr2 (19 HSPs)
chr2 (128-210)||(16066350-16066433)
chr2 (128-210)||(33906103-33906186)
chr2 (128-210)||(2178825-2178908)
chr2 (128-210)||(3873300-3873383)
chr2 (128-210)||(16588832-16588915)
chr2 (128-210)||(18806940-18807023)
chr2 (143-210)||(19901209-19901276)
chr2 (128-210)||(26323242-26323325)
chr2 (128-210)||(28329893-28329976)
chr2 (128-210)||(30420223-30420306)
chr2 (128-210)||(31517271-31517354)
chr2 (143-210)||(429882-429950)
chr2 (143-210)||(1482974-1483042)
chr2 (128-180)||(3585387-3585439)
chr2 (128-210)||(1108345-1108428)
chr2 (128-210)||(4232198-4232281)
chr2 (128-198)||(22101203-22101273)
chr2 (145-210)||(42446642-42446708)
chr2 (146-210)||(42937785-42937850)
[»] scaffold1777 (1 HSPs)
scaffold1777 (128-210)||(62-145)
[»] scaffold0018 (1 HSPs)
scaffold0018 (128-210)||(145301-145384)
[»] scaffold0012 (1 HSPs)
scaffold0012 (128-210)||(36771-36854)
[»] scaffold0002 (1 HSPs)
scaffold0002 (29-61)||(481133-481165)


Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 12 - 231
Target Start/End: Original strand, 30075161 - 30075378
Alignment:
Q  12 aaaatcatagaatgatgtaagctctagtctataagctctaatgttataagttcaagggaatgtgaggagcgaagtggataacatgtattgacataaactc 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||||||||||| |||    
T  30075161 aaaaccatagaatgatgtaagctctagtctataagctctaatgttataagttcaaggaaatgcgaggatcaaagtggataacatgtattgacataagctc 30075260  T
Q  112 catataaaccatctgctaagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttattatttacccaaacg 211  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  30075261 cgtataagccatctgctaagctcaaaattatggcttattaaaatatggtataagcggtttatgaaat--atataagctatttttattatttacccaaacg 30075358  T
Q  212 catctgaaagggcttttgtt 231  Q
     |||||||||||||| ||||    
T  30075359 tatctgaaagggcttatgtt 30075378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 3511473 - 3511390
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttat-tatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||||||||||| |||||||||||||    
T  3511473 taagctaaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatctatttacccaaac 3511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 7164334 - 7164251
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  7164334 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 7164251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 12101224 - 12101307
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  12101224 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 12101307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 24792378 - 24792461
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  24792378 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 24792461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 25748637 - 25748554
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  25748637 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 25748554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 30181070 - 30181153
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  30181070 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 30181153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 33359136 - 33359219
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  33359136 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 33359219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 42204305 - 42204222
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  42204305 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttacttatttacccaaac 42204222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 42965042 - 42965125
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  42965042 taagctaaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 42965125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 22649755 - 22649823
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| |||||| ||||||||||||   |||| ||||||||| ||||||||||||||    
T  22649755 ggcttattaaaatatggcataagcagcttatgaaattatgataaactatttttatttatttacccaaac 22649823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 933435 - 933352
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  933435 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 933352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 17753750 - 17753667
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |    ||||||||||||| ||||||||||||||    
T  17753750 taagctaaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgttaagctatttttatttatttacccaaac 17753667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 48865783 - 48865700
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  48865783 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 48865700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 1803176 - 1803094
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaa 209  Q
    |||||| ||||||  |||||| |||||||| |||||||| |||||||||| |   |||||||||||||| |||||||||||||    
T  1803176 taagctgaaaatttaggcttaataaaatatcgtataagcagcttatgaaactatgataagctatttttatttatttacccaaa 1803094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 33846569 - 33846653
Alignment:
Q  127 ctaagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||| ||||||  ||||||||||||||||  |||||| | |||||||| |   |||||||||||||| ||||||||||||||    
T  33846569 ctaagctgaaaatttaggcttattaaaatatgacataagcagtttatgaaactatgataagctatttttatttatttacccaaac 33846653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 37005874 - 37005942
Alignment:
Q  145 cttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaacgc 212  Q
    ||||||||||||| | |||||| ||||||||||||   |||||||||||||| | ||||||||||||||    
T  37005874 cttattaaaatatagcataagcagcttatgaaattacgataagctatttttactgatttacccaaacgc 37005942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 4347423 - 4347340
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||| ||||||||||| |||||| |||||||||| |    ||||||||||||| ||||||||||||||    
T  4347423 taagctgaaaatttaggcttgttaaaatatggcataagcagcttatgaaactatggtaagctatttttatttatttacccaaac 4347340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 5281010 - 5280927
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||| |||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  5281010 taagctgaaaatttaggcttattgaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 5280927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 15656062 - 15655979
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttt-attatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| |||||  ||||||||||||||    
T  15656062 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctgtttttgtttatttacccaaac 15655979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 20163953 - 20163882
Alignment:
Q  144 gcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt-atttacccaaacgcat 214  Q
    |||| |||||||||| ||||||| |||||||||| ||  |||||||||||| ||| ||| ||||||||||||    
T  20163953 gcttgttaaaatatgctataagcagcttatgaaactgtgataagctattttaattaattcacccaaacgcat 20163882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 20346638 - 20346555
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  | ||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  20346638 taagctgaaaatttagacttattaaaatatggcataagcagcttatgaaactatgataatctatttttatttatttacccaaac 20346555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 32041692 - 32041609
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||| ||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  32041692 taagctgaaaatttaggcttatgaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 32041609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 43068019 - 43068102
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||  |||||||||| |   |||||||||||||| ||||||||||||||    
T  43068019 taagctgaaaatttaggcttattaaaatatgacataagaagcttatgaaactatgataagctatttttatttatttacccaaac 43068102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 15655458 - 15655528
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt 198  Q
    |||||||||||||   |||||||||||| |||||||||| | |||| ||||||   |||||||||||||||    
T  15655458 taagctcaaaatttgagcttattaaaatttggtataagcagtttataaaattgtggtaagctatttttatt 15655528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 16894553 - 16894623
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt 198  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| |||||||||||    
T  16894553 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatt 16894623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 42673611 - 42673541
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt 198  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| ||||||||    
T  42673611 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctgtttttatt 42673541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 43405155 - 43405085
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt-atttacccaaacgc 212  Q
    ||||||||||||||| ||| || |  |||||||||||   |||||||||||||||| ||||||||||||||    
T  43405155 ggcttattaaaatatagtagaaacaacttatgaaattacgataagctatttttattgatttacccaaacgc 43405085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 4477382 - 4477450
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||| |||||||| |||||| ||||||||||     |||||||||||||| ||||||||||||||    
T  4477382 ggcttattgaaatatggcataagcagcttatgaaaccatgataagctatttttatttatttacccaaac 4477450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 8630801 - 8630737
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttaccc 206  Q
    ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||    
T  8630801 ggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttaccc 8630737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 19828413 - 19828337
Alignment:
Q  135 aaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| |||||||||||||||||| ||||||   |||||||| |   |||||||||||||| ||||||| ||||||    
T  19828413 aaaattttggcttattaaaatatggcataagcaatttatgaaactatgataagctatttttatttatttagccaaac 19828337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 36890891 - 36890959
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||| |||||||| ||||||  ||||||||| |   |||||||||||||| ||||||||||||||    
T  36890891 ggcttattgaaatatggcataagcaacttatgaaactatgataagctatttttatttatttacccaaac 36890959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 5217839 - 5217943
Alignment:
Q  127 ctaagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttattatttacccaaacgcatctgaaagggctt 226  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || |||||| ||||    
T  5217839 ctaagctcaaaattatggcttataaaaatatggtataagcggcttatgaaattggtataagctatttttattatttacccaaatgtatttgaaagagctt 5217938  T
Q  227 ttgtt 231  Q
     ||||    
T  5217939 atgtt 5217943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 1168652 - 1168569
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  1168652 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 1168569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 16052245 - 16052162
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  16052245 taagctgaaaattcaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 16052162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 25897523 - 25897440
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  25897523 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 25897440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 43905788 - 43905720
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  43905788 ggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 43905720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 5215534 - 5215451
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| ||||||  ||||||||| |   |||||||||||||| ||||||||||||||    
T  5215534 taagctgaaaatttaggcttattaaaatatggcataagcaacttatgaaactatgataagctatttttacttatttacccaaac 5215451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 26580326 - 26580409
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||| ||||||||||    
T  26580326 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttacttacccaaac 26580409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 29078665 - 29078582
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  || |||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  29078665 taagctgaaaatttaggtttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 29078582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 29288298 - 29288215
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  29288298 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 29288215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 38829218 - 38829135
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| | |||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  38829218 taagctgaaaatttaggcttattaaaatatggcacaagcagcttatgaaactatgataagctatttttatttatttacccaaac 38829135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 39260402 - 39260485
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| ||||||  ||||||||| |   |||||||||||||| ||||||||||||||    
T  39260402 taagctgaaaatttaggcttattaaaatatggcataagcaacttatgaaactatgataagctatttttatttatttacccaaac 39260485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 40092640 - 40092557
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||| |||||||| ||||||||||||||    
T  40092640 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagatatttttatttatttacccaaac 40092557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 46409584 - 46409501
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||| |||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  46409584 taagctgaaaatttaggcttattgaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 46409501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 46761115 - 46761032
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| | |||||||| |   |||||||||||||| ||||||||||||||    
T  46761115 taagctgaaaatttaggcttattaaaatatggcataagcagtttatgaaactatgataagctatttttatttatttacccaaac 46761032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 52753203 - 52753286
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||  |||||||||| |   |||||||||||||| ||||||||||||||    
T  52753203 taagctgaaaatttaggcttattaaaatatggcataagtagcttatgaaactatgataagctatttttatttatttacccaaac 52753286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 51359273 - 51359355
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttt-attatttacccaaa 209  Q
    |||||| ||||||  ||||||||||||||||| ||||||  ||||||||| |   ||||||||||||| ||||||||||||||    
T  51359273 taagctgaaaatttaggcttattaaaatatggcataagcaccttatgaaactatgataagctatttttaattatttacccaaa 51359355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 8079780 - 8079848
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| |||||  |||||||||| |   |||||||||||||| ||||||||||||||    
T  8079780 ggcttattaaaatatggcataagtagcttatgaaactatgataagctatttttatttatttacccaaac 8079848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 12682954 - 12682886
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||| ||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  12682954 ggcttatgaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 12682886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 13996794 - 13996862
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| |||||| ||||||||||    ||||||||||||||| ||||||| ||||||    
T  13996794 ggcttattaaaatatggcataagcagcttatgaaaccattataagctatttttatttatttatccaaac 13996862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 32671713 - 32671645
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| |||||  |||||||||| |   |||||||||||||| ||||||||||||||    
T  32671713 ggcttattaaaatatggcataagtagcttatgaaactatgataagctatttttatttatttacccaaac 32671645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 1170500 - 1170583
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   ||||||| |||||| ||||||||||||||    
T  1170500 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctgtttttatttatttacccaaac 1170583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 2473871 - 2473788
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||| |||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  2473871 taagctgaaaatttaggcttattgaaatatgacataagcagcttatgaaactataataagctatttttatttatttacccaaac 2473788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 17587561 - 17587644
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| |||||| ||||||| ||||||    
T  17587561 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaaatatgataagctgtttttatttatttagccaaac 17587644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 20089620 - 20089537
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||| ||||    
T  20089620 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacctaaac 20089537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 26663407 - 26663324
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||| | |||||||||| |   |||||||||||||| ||||||| ||||||    
T  26663407 taagctgaaaatttaggcttattaaaatatggcataaacagcttatgaaactatgataagctatttttatttatttatccaaac 26663324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 33510633 - 33510550
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||| ||||||    
T  33510633 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttatccaaac 33510550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 41928551 - 41928634
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||| ||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  41928551 taagctgaaaatttaggcttgttaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 41928634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 52696940 - 52696857
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttt-attatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| |||||  ||||||||||||||    
T  52696940 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctgtttttgtttatttacccaaac 52696857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 7145356 - 7145307
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaa 177  Q
    |||||| ||||||  ||||||||||||||||| |||||| ||||||||||    
T  7145356 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaa 7145307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 17591822 - 17591754
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||  |||||| |||||||||| |   ||||||| |||||| ||||||||||||||    
T  17591822 ggcttattaaaatatgacataagcagcttatgaaactatgataagctgtttttatttatttacccaaac 17591754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 49146306 - 49146238
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||| |||||||| |||||| |||||||||| |   |||||||||||||| ||||||| ||||||    
T  49146306 ggcttattgaaatatggcataagcagcttatgaaactatgataagctatttttatttatttatccaaac 49146238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 25634735 - 25634630
Alignment:
Q  125 tgctaagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttattatttacccaaacgcatctgaaagggc 224  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| || |||||| ||    
T  25634735 tgctaagctcaaaattatggtttattaaaatatggtataagcggcttatgaaattgttataagcta-ttttattatttacccaaacgtatttgaaagagc 25634637  T
Q  225 ttttgtt 231  Q
    || ||||    
T  25634636 ttatgtt 25634630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 3386542 - 3386625
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  3386542 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 3386625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 9008113 - 9008196
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  9008113 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 9008196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 16737503 - 16737586
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  16737503 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 16737586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 27679225 - 27679308
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  27679225 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 27679308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 38598506 - 38598589
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  38598506 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttacttatttacccaaac 38598589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 1579188 - 1579105
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  1579188 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 1579105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 1605627 - 1605710
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  1605627 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 1605710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 3921733 - 3921650
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||| ||||||    
T  3921733 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttatccaaac 3921650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 8374394 - 8374477
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  8374394 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 8374477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 16069505 - 16069422
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| |||||||| |||||    
T  16069505 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttactcaaac 16069422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 19358678 - 19358595
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||| |||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  19358678 taagctgaaaatttaggcttactaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 19358595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 33491252 - 33491335
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| | |||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  33491252 taagctgaaaatttaggcttattaaaatatggcaaaagcagcttatgaaactatgataagctatttttatttatttacccaaac 33491335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 33991292 - 33991209
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| ||||||  ||||||||| |   |||||||||||||| ||||||||||||||    
T  33991292 taagctgaaaatttaggcttattaaaatatggcataagcaacttatgaaactatgataagctatttttatttatttacccaaac 33991209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 35782716 - 35782783
Alignment:
Q  144 gcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  35782716 gcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 35782783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 19516044 - 19516097
Alignment:
Q  146 ttattaaaatatggtataagcggcttatgaaattgatataagctatttttatta 199  Q
    ||||||||||||   |||||| | ||||||||||||||||||||||||||||||    
T  19516044 ttattaaaatattacataagcagtttatgaaattgatataagctatttttatta 19516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 24105742 - 24105810
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  24105742 ggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 24105810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 26603006 - 26603081
Alignment:
Q  135 aaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||| ||||||||||||||| |||||| | |||||||| |   |||||||||||||| ||||||||||||||    
T  26603006 aaaattatg-cttattaaaatatggcataagcagtttatgaaactatgataagctatttttatttatttacccaaac 26603081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 1165657 - 1165740
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  ||||||  ||||||||| |   |||||||||||||| ||||||||||||||    
T  1165657 taagctgaaaatttaggcttattaaaatatgacataagcaacttatgaaactatgataagctatttttatttatttacccaaac 1165740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 4121089 - 4121006
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||  |||||||| ||||||||||||||    
T  4121089 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaattatttttacttatttacccaaac 4121006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 5203124 - 5203041
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||| |||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  5203124 taagctgaaaatttaggcttattgaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 5203041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 20992202 - 20992285
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||| | |||||||||| |   ||| |||||||||| ||||||||||||||    
T  20992202 taagctgaaaatttaggcttattaaaatatggcataatcagcttatgaaactatgatatgctatttttatttatttacccaaac 20992285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 27025108 - 27025029
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttaccc 206  Q
    |||||| ||||||  |||||||||||| |||| |||||| |||||||||| |   |||||||||||||| ||||||||||    
T  27025108 taagctgaaaatttaggcttattaaaaaatggcataagcagcttatgaaactatgataagctatttttatttatttaccc 27025029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 27421010 - 27420927
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| |||||||| |||||    
T  27421010 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttactcaaac 27420927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 31883296 - 31883213
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  31883296 taagctaaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataaactatttttatttatttacccaaac 31883213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 20992354 - 20992420
Alignment:
Q  145 cttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||| |||||| |||||||||| |   ||| |||||||||| ||||||||||||||    
T  20992354 cttattaaaatatggcataagcagcttatgaaactatgatatgctatttttatttatttacccaaac 20992420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 18683844 - 18683757
Alignment:
Q  144 gcttattaaaatatggtataagcggcttatgaaattgatataagctatttttattatttacccaaacgcatctgaaagggcttttgtt 231  Q
    |||||| ||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| || |||||| |||| ||||    
T  18683844 gcttatgaaaatatggtataagcggcttataaaattggtataaactatttttattatttacccaaacgtatttgaaagagcttatgtt 18683757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 18729406 - 18729319
Alignment:
Q  144 gcttattaaaatatggtataagcggcttatgaaattgatataagctatttttattatttacccaaacgcatctgaaagggcttttgtt 231  Q
    |||||| ||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| || |||||| |||| ||||    
T  18729406 gcttatgaaaatatggtataagcggcttataaaattggtataaactatttttattatttacccaaacgtatttgaaagagcttatgtt 18729319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 34998953 - 34999035
Alignment:
Q  129 aagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||| ||||||  ||||||||||||||||| |||||| |||||||||| | | |||||||||||||| ||||||||||||||    
T  34998953 aagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactaagataagctatttttatttatttacccaaac 34999035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 22260686 - 22260771
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt-atttacccaaacgc 212  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||||| ||||||||||||||    
T  22260686 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactaggataagctatttttattgatttacccaaacgc 22260771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 2322068 - 2322151
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt-atttacccaaac 210  Q
    |||||| ||||||  ||||||| |||||||| ||||||| |||||||||||||  ||||||| |||||||| ||||||||||||    
T  2322068 taagcttaaaatttaggcttatcaaaatatgatataagcagcttatgaaattgtgataagctgtttttattgatttacccaaac 2322151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 14422854 - 14422771
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  14422854 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 14422771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 29938212 - 29938129
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  29938212 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttacttatttacccaaac 29938129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 39220407 - 39220324
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt-atttacccaaac 210  Q
    |||||||||||||   |||||||||||||| |||| ||| |||||||||||||  |||||||||||||||| |||||| |||||    
T  39220407 taagctcaaaatttgagcttattaaaatatagtatgagcagcttatgaaattggaataagctatttttattgatttactcaaac 39220324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 4035998 - 4035915
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| || |||||||||||    
T  4035998 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttgtttacccaaac 4035915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 6144345 - 6144412
Alignment:
Q  144 gcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  6144345 gcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 6144412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 13110555 - 13110472
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||| ||| |   |||||||||||||| ||||||||||||||    
T  13110555 taagctgaaaatttaggcttattaaaatatggcataagcagcttattaaactatgataagctatttttatttatttacccaaac 13110472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 18594688 - 18594605
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  18594688 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 18594605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 35118087 - 35118170
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  35118087 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 35118170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 39206737 - 39206654
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  | ||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  39206737 taagctgaaaatttagacttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 39206654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 34679513 - 34679583
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt 198  Q
    |||||| ||||||  |||||||||||||||||||||||| |||||||||| |   |||| |||||||||||    
T  34679513 taagctgaaaatttaggcttattaaaatatggtataagcagcttatgaaactatgataaactatttttatt 34679583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 26783804 - 26783872
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| |||||| |||||||||| |   ||||||||| |||| ||||||||||||||    
T  26783804 ggcttattaaaatatggcataagcagcttatgaaactatgataagctatatttatttatttacccaaac 26783872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 144545 - 144462
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||| ||||||||||    
T  144545 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttacttacccaaac 144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 2042580 - 2042663
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   ||||||| |||||| ||||||||||||||    
T  2042580 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctgtttttatttatttacccaaac 2042663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 2320568 - 2320529
Alignment:
Q  23 atgatgtaagctctagt-ctataagctctaatgttataag 61  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  2320568 atgatgtaagctctagtgctataagctctaatgttataag 2320529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 10836811 - 10836894
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| | |||||||| |   |||| ||||||||| ||||||||||||||    
T  10836811 taagctgaaaatttaggcttattaaaatatggcataagcagtttatgaaactatgataaactatttttatttatttacccaaac 10836894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 28639433 - 28639350
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||| ||||    
T  28639433 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttaccaaaac 28639350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 33278551 - 33278468
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||| ||||||    
T  33278551 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttatccaaac 33278468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 33287081 - 33287164
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||| ||||||    
T  33287081 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttatccaaac 33287164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 38167211 - 38167294
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||| ||||| ||||||||||||||    
T  38167211 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactagttttatttatttacccaaac 38167294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 40117924 - 40117991
Alignment:
Q  144 gcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  40117924 gcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 40117991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 42571720 - 42571662
Alignment:
Q  152 aaatatggtataagcggcttatgaaattgatataagctatttttattatttacccaaac 210  Q
    |||||||  |||||| |||||||||| |   ||||||||||||||||||||||||||||    
T  42571720 aaatatgacataagcagcttatgaaactatgataagctatttttattatttacccaaac 42571662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 8021855 - 8021787
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||  |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  8021855 ggcttattaaaatatgacataagcagcttatgaaactatgataaactatttttatttatttacccaaac 8021787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 34842436 - 34842504
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||| |||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  34842436 ggcttattgaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 34842504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 42307947 - 42308032
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaacgc 212  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||||    
T  42307947 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaacgc 42308032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 25494327 - 25494410
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  25494327 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 25494410  T

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Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 25999534 - 25999451
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  25999534 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 25999451  T

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Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 38856239 - 38856156
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  38856239 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 38856156  T

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Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 35643363 - 35643282
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaa 208  Q
    |||||||||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||    
T  35643363 taagctcaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaa 35643282  T

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Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 8042753 - 8042670
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  8042753 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttacttatttacccaaac 8042670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 21581188 - 21581105
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||| |||||||| ||||||||||||||    
T  21581188 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagttatttttatttatttacccaaac 21581105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 22175032 - 22175115
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| |||||| ||||||||||||||    
T  22175032 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctgtttttatttatttacccaaac 22175115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 37698185 - 37698268
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  37698185 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 37698268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 44609375 - 44609458
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| |||||| ||||||||||||||    
T  44609375 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctgtttttatttatttacccaaac 44609458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 50529075 - 50528992
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| |||||| ||||||||||||||    
T  50529075 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctgtttttatttatttacccaaac 50528992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 50529830 - 50529898
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||| |||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  50529830 ggctcattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 50529898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 54870216 - 54870299
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgat-ataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| ||||||||||  ||| |||||||||||||| ||||||||||||||    
T  54870216 taagctaaaaatttaggcttattaaaatatgacataagcagcttatgaaa-cgatgataagctatttttatttatttacccaaac 54870299  T

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Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 15520782 - 15520699
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttt-attatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| |||||  ||||||||||||||    
T  15520782 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctgtttttgtttatttacccaaac 15520699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 20699295 - 20699212
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttt-attatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| |||||  ||||||||||||||    
T  20699295 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctgtttttgtttatttacccaaac 20699212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 20842390 - 20842473
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||||||||||| ||||||| |||||||||| |   ||||| | |||||| ||||||||||||||    
T  20842390 taagctgaaaatttaggcttattaaaatatgatataagcagcttatgaaactatgataagttgtttttatttatttacccaaac 20842473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 24835741 - 24835824
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||| |||||||| |||||| |||||||||| |   |||||||||||||| ||||||| ||||||    
T  24835741 taagctgaaaatttaggcttattgaaatatggcataagcagcttatgaaactataataagctatttttatttatttatccaaac 24835824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 29445634 - 29445551
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||||||||| || |||| | |||||||||| |   |||||||||||||| ||||||||||||||    
T  29445634 taagctgaaaatttaggcttattaaaatagggcataaacagcttatgaaactatgataagctatttttatttatttacccaaac 29445551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 32244250 - 32244183
Alignment:
Q  144 gcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  32244250 gcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 32244183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 32359405 - 32359322
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| |||||||| |||||    
T  32359405 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttactcaaac 32359322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 35226593 - 35226510
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagct-atttttattatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| |||||  ||||||||||||||    
T  35226593 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctgattttatttatttacccaaac 35226510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 2895331 - 2895282
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaa 177  Q
    |||||| ||||||  ||||||||||||||||| |||||| ||||||||||    
T  2895331 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaa 2895282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 46452206 - 46452287
Alignment:
Q  130 agctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||| ||||||  ||||||||||||||||| ||||||  ||||||||| |   |||| ||||||||| ||||||||||||||    
T  46452206 agctgaaaatttaggcttattaaaatatggcataagcaacttatgaaactatgataaactatttttatttatttacccaaac 46452287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 49128177 - 49128112
Alignment:
Q  146 ttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt-atttacccaaac 210  Q
    |||||||||||| | |||||| ||||||||||||   ||||| |||||||||| ||||||||||||    
T  49128177 ttattaaaatatagcataagcagcttatgaaattacgataagttatttttattgatttacccaaac 49128112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 15520184 - 15520267
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgat-ataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| | ||||||||  ||| ||||| |||||||| ||||||||||||||    
T  15520184 taagctgaaaatttaggcttattaaaatatggcataagcagtttatgaaa-cgatgataagttatttttatttatttacccaaac 15520267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 34700472 - 34700404
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| |||||||| |||||    
T  34700472 ggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttactcaaac 34700404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0920 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 3859 - 3776
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  3859 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 10387 - 10304
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||||||||||||||||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  10387 taagctgaaaatttaggcttattaaaatatggtataagcagcttatgaaactatgataaactatttttatttatttacccaaac 10304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 23007 - 23090
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  23007 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 23090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 17261129 - 17261212
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||| | |||||| |||||||||| |  ||||||||||||||| ||||||||||||||    
T  17261129 taagctgaaaatttaggcttattaaaatatagcataagcagcttatgaaaatattataagctatttttatttatttacccaaac 17261212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 26704395 - 26704478
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  26704395 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 26704478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 30692002 - 30691919
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  30692002 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 30691919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 9459714 - 9459632
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaa 209  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| |||||||||||||    
T  9459714 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaa 9459632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 21893591 - 21893523
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttat-tatttacccaaac 210  Q
    ||||||||||||||||| |||||| |||||||||| |   ||||||||||||||| |||||||||||||    
T  21893591 ggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatatatttacccaaac 21893523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 52987 - 52904
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  52987 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 52904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 1153744 - 1153661
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  1153744 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataatctatttttacttatttacccaaac 1153661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 6086655 - 6086738
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  6086655 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 6086738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 11167391 - 11167308
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  11167391 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 11167308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 26946932 - 26947015
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  26946932 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 26947015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 33464480 - 33464399
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaa 208  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||    
T  33464480 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttacttatttacccaa 33464399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 35198419 - 35198351
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||| |||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  35198419 ggcttattgaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 35198351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 2837696 - 2837613
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| || ||| ||| |||||| |   |||||||||||||| ||||||||||||||    
T  2837696 taagctgaaaatttaggcttattaaaatatggcatgagcagctcatgaaactatgataagctatttttatttatttacccaaac 2837613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 3955822 - 3955905
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||| | |||||| | |||||||| |   |||||||||||||| ||||||||||||||    
T  3955822 taagctgaaaatttaggcttattaaaatatagcataagcagtttatgaaactatgataagctatttttatttatttacccaaac 3955905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 30698985 - 30699068
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| ||| || ||| |   |||||||||||||| ||||||||||||||    
T  30698985 taagctgaaaatttaggcttattaaaatatggcataagcagctaataaaactatgataagctatttttatttatttacccaaac 30699068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 34887348 - 34887431
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||| |||||||| |||| | |||||||||| |   |||||||||||||| ||||||||||||||    
T  34887348 taagctgaaaatttaggcttattgaaatatggcataaacagcttatgaaactatgataagctatttttatttatttacccaaac 34887431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 20726938 - 20726868
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt 198  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||| ||||||||||    
T  20726938 taagctaaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagttatttttatt 20726868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 11639622 - 11639705
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  11639622 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 11639705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 23776503 - 23776586
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  23776503 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 23776586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 40428764 - 40428847
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||| |||||||||||||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  40428764 taagctgaaaatttaggcttatcaaaatatggtataagcagcttatgaaactatgataagctatttttatttatttacccaaac 40428847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 51780763 - 51780846
Alignment:
Q  129 aagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt-atttacccaaacg 211  Q
    ||||| ||||||  ||||||||||||||||| |||||| ||||||||||||   |||||||||||||||| ||||| |||||||    
T  51780763 aagcttaaaatttgggcttattaaaatatggcataagcagcttatgaaattatgataagctatttttattgatttatccaaacg 51780846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 52139352 - 52139269
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  52139352 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 52139269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 54189694 - 54189611
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  54189694 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 54189611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 50353935 - 50353867
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  50353935 ggcttattaaaatatggcataagcagcttatgaaactatcataagctatttttatttatttacccaaac 50353867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 1756808 - 1756891
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  1756808 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataatctatttttatttatttacccaaac 1756891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 2481452 - 2481535
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttt-attatttacccaaac 210  Q
    |||||| |||||| |||||||||||||||||| |||||| |||||||||| |   ||||||| |||||  ||||||||||||||    
T  2481452 taagctgaaaattttggcttattaaaatatggcataagcagcttatgaaactatgataagctgtttttgtttatttacccaaac 2481535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 8591136 - 8591219
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||||| |||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  8591136 taagctgaaaatttaggcttattaacatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 8591219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 14987941 - 14987858
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  14987941 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 14987858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 27488708 - 27488775
Alignment:
Q  144 gcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  27488708 gcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 27488775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 37968801 - 37968884
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||| |||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  37968801 taagctgaaaatttaggcttattgaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 37968884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 43290004 - 43290087
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| |||||||| |||||    
T  43290004 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttactcaaac 43290087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 45424578 - 45424661
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  45424578 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 45424661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 53717508 - 53717591
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||||||||| || |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  53717508 taagctgaaaatttaggcttattaaaatagggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 53717591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 17493482 - 17493397
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt-atttacccaaacgc 212  Q
    |||||||||||||   ||||||||||| ||||||||||| |||||| |||||   ||||| |||||||||| |||||| |||||||    
T  17493482 taagctcaaaatttgagcttattaaaacatggtataagcagcttataaaattagaataagatatttttattgatttactcaaacgc 17493397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 38071379 - 38071447
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  38071379 ggcttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 38071447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 53353189 - 53353125
Alignment:
Q  147 tattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  53353189 tattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 53353125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 16700930 - 16700847
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   ||||||| |||||| ||||||||||||||    
T  16700930 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctgtttttatttatttacccaaac 16700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 20877196 - 20877113
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  20877196 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataaactatttttatttatttacccaaac 20877113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 23704253 - 23704336
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||| | |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  23704253 taagctgaaaatttaggcttattaaaatatagcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 23704336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 27536148 - 27536231
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| | |||||||| |   |||| ||||||||| ||||||||||||||    
T  27536148 taagctgaaaatttaggcttattaaaatatggcataagcagtttatgaaactatgataaactatttttatttatttacccaaac 27536231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 28032756 - 28032839
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  | ||||||||||||||| |||||| |||||||| | |   |||||||||||||| ||||||||||||||    
T  28032756 taagctgaaaatttagacttattaaaatatggcataagcagcttatgatactatgataagctatttttatttatttacccaaac 28032839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 30171729 - 30171646
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  |||||||| ||||||||||||||| |||||||||| |   |||||||||||| | ||||||| ||||||    
T  30171729 taagctgaaaatttaggcttattgaaatatggtataagcagcttatgaaactatgataagctattttcatttatttatccaaac 30171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 30423624 - 30423691
Alignment:
Q  144 gcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||| |||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  30423624 gcttattgaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 30423691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 31969830 - 31969747
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||| | |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  31969830 taagctgaaaatttaggcttattaaaatatagcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 31969747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 35490817 - 35490900
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| ||||||  ||||||||| |   |||||||||||||| ||||||| ||||||    
T  35490817 taagctgaaaatttaggcttattaaaatatggcataagcaacttatgaaactatgataagctatttttatttatttatccaaac 35490900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 38055306 - 38055223
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||  |||||||| ||||||||||||||    
T  38055306 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataaaatatttttatttatttacccaaac 38055223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 47632168 - 47632101
Alignment:
Q  144 gcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||||||||||| |||||| |||||||||| |   | |||||||||||| ||||||||||||||    
T  47632168 gcttattaaaatatggcataagcagcttatgaaactatgagaagctatttttatttatttacccaaac 47632101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 55344869 - 55344952
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| |||||| ||||||||||||||||||||||| |  || ||| || |   |||||||||||||| ||||||||||||||    
T  55344869 taagctgaaaattttggcttattaaaatatggtataaacaactcatgcaaatatgataagctatttttatttatttacccaaac 55344952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 23269090 - 23269160
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt 198  Q
    |||||| ||||||  ||||||||||||||| | |||||| |||||||||| |   ||||||||||||||||    
T  23269090 taagctgaaaatttaggcttattaaaatatagcataagcagcttatgaaactatgataagctatttttatt 23269160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 40680082 - 40680152
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt 198  Q
    |||||| ||||||  ||||||| ||||||||| |||||| |||||||||| |   ||||||||||||||||    
T  40680082 taagctaaaaatttaggcttatgaaaatatggcataagcagcttatgaaactatgataagctatttttatt 40680152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 50053575 - 50053509
Alignment:
Q  145 cttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||| |||||| |||||||||| |   |||||||||||||| |||||| |||||||    
T  50053575 cttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttgcccaaac 50053509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 50055145 - 50055194
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaa 177  Q
    |||||| ||||||  ||||||||||||||||| |||||| ||||||||||    
T  50055145 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaa 50055194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 37464855 - 37464787
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| |||||| |||||||||| |   |||| || |||||| ||||||||||||||    
T  37464855 ggcttattaaaatatggcataagcagcttatgaaactatgataaactgtttttatttatttacccaaac 37464787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 44784976 - 44785044
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| ||||||  ||||||||| |   |||||||||||||| || |||||||||||    
T  44784976 ggcttattaaaatatggcataagcaacttatgaaactatgataagctatttttatttgtttacccaaac 44785044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 16066350 - 16066433
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  16066350 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 16066433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 33906103 - 33906186
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  33906103 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 33906186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 2178825 - 2178908
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||| |||||| ||||||||||||||    
T  2178825 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctgtttttatttatttacccaaac 2178908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 3873300 - 3873383
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   ||||||||| |||| ||||||||||||||    
T  3873300 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatatttatttatttacccaaac 3873383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 16588832 - 16588915
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||| ||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  16588832 taagctgaaaatttaggcttatgaaaatatggcataagcagcttatgaaactataataagctatttttatttatttacccaaac 16588915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 18806940 - 18807023
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||| | |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  18806940 taagctaaaaatttaggcttattaaaatatagcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 18807023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 19901209 - 19901276
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttattatttacccaaac 210  Q
    |||||||| |||||||| |||||| | |||||||| |   ||||||||||||||||||||||||||||    
T  19901209 ggcttattgaaatatggcataagcagtttatgaaactatgataagctatttttattatttacccaaac 19901276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 26323242 - 26323325
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||| ||||||    
T  26323242 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttatccaaac 26323325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 28329893 - 28329976
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| | |||||||| |   |||||||||||||| ||||||||||||||    
T  28329893 taagctgaaaatttaggcttattaaaatatggcataagcagtttatgaaactatgataagctatttttatttatttacccaaac 28329976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 30420223 - 30420306
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| |||||||||  |   |||||||||||||| ||||||||||||||    
T  30420223 taagctgaaaatttaggcttattaaaatatggcataagcagcttatgaacctatgataagctatttttatttatttacccaaac 30420306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 31517271 - 31517354
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| |||||| | |||||||| |   |||||||||||||| ||||||||||||||    
T  31517271 taagctgaaaatttaggcttattaaaatatggcataagcagtttatgaaactatgataagctatttttatttatttacccaaac 31517354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 429950 - 429882
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||| | ||||||  |||||||||||   |||||||||||||| ||||||||||||||    
T  429950 ggcttattaaaatatcgcataagcaacttatgaaattatgataagctatttttatttatttacccaaac 429882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 1482974 - 1483042
Alignment:
Q  143 ggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    ||||||||||||||||| |||||| ||||||||||     |||||||||||||| ||||||||||||||    
T  1482974 ggcttattaaaatatggcataagcagcttatgaaacaataataagctatttttatttatttacccaaac 1483042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 3585439 - 3585387
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattg 180  Q
    |||||||| ||||  ||||||||||||||||| |||||| |||||||||||||    
T  3585439 taagctcataattcaggcttattaaaatatggcataagcagcttatgaaattg 3585387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 1108428 - 1108345
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||| ||||||  ||||||||| |   |||| ||||||||| ||||||||||||||    
T  1108428 taagctgaaaatttaggcttattaaaatatggcataagcaacttatgaaactatgataaactatttttatttatttacccaaac 1108345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 4232198 - 4232281
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||| | ||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  4232198 taagctgaaaatttaggcttgtgaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 4232281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 22101203 - 22101273
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt 198  Q
    |||| ||||||||  ||||||||||||||||  |||||| |||||||||||||  ||||| | ||||||||    
T  22101203 taagttcaaaatttgggcttattaaaatatgacataagcagcttatgaaattgtgataagttgtttttatt 22101273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 42446642 - 42446708
Alignment:
Q  145 cttattaaaatatggtataagcggcttatgaaattgatataagctatttttatt-atttacccaaac 210  Q
    ||||||||||||||| |||||| |||||||||||||  ||||| | |||||||| ||||||| ||||    
T  42446642 cttattaaaatatggcataagcagcttatgaaattgtgataagttgtttttattgatttacctaaac 42446708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 42937850 - 42937785
Alignment:
Q  146 ttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||||||||||| |||||| |||||||||| |   |||| ||||||||| ||||||||||||||    
T  42937850 ttattaaaatatggcataagcagcttatgaaactatgataaactatttttatttatttacccaaac 42937785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1777 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 62 - 145
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  || |||||||||||||| |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  62 taagctgaaaatttaggattattaaaatatggcataagcagcttatgaaactatgataagctatttttatttatttacccaaac 145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 145301 - 145384
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  145301 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 145384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 36854 - 36771
Alignment:
Q  128 taagctcaaaattatggcttattaaaatatggtataagcggcttatgaaattgatataagctattttta-ttatttacccaaac 210  Q
    |||||| ||||||  ||||||||||||||||  |||||| |||||||||| |   |||||||||||||| ||||||||||||||    
T  36854 taagctgaaaatttaggcttattaaaatatgacataagcagcttatgaaactatgataagctatttttatttatttacccaaac 36771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 481165 - 481133
Alignment:
Q  29 taagctctagtctataagctctaatgttataag 61  Q
    |||||||||||||||||||||||||| ||||||    
T  481165 taagctctagtctataagctctaatgctataag 481133  T

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