View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6542_low_11 (Length: 240)

Name: NF6542_low_11
Description: NF6542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6542_low_11
NF6542_low_11
[»] chr3 (29 HSPs)
chr3 (62-210)||(42907769-42907917)
chr3 (62-209)||(29727737-29727885)
chr3 (62-209)||(51537144-51537292)
chr3 (62-185)||(53351171-53351294)
chr3 (62-198)||(42217128-42217264)
chr3 (62-198)||(15100604-15100740)
chr3 (62-162)||(23241865-23241965)
chr3 (62-162)||(30465089-30465189)
chr3 (62-198)||(35054676-35054812)
chr3 (59-162)||(55258087-55258190)
chr3 (62-162)||(37599876-37599976)
chr3 (62-162)||(39850695-39850795)
chr3 (62-157)||(33634883-33634978)
chr3 (63-144)||(11412513-11412594)
chr3 (62-163)||(29025259-29025360)
chr3 (62-162)||(2849268-2849367)
chr3 (62-162)||(26725552-26725644)
chr3 (62-131)||(10259228-10259297)
chr3 (62-183)||(11018705-11018825)
chr3 (114-198)||(44832455-44832539)
chr3 (127-197)||(5123819-5123889)
chr3 (114-198)||(52404317-52404401)
chr3 (117-198)||(3046499-3046579)
chr3 (61-134)||(11676262-11676334)
chr3 (62-186)||(11574994-11575118)
chr3 (124-172)||(41459667-41459715)
chr3 (62-198)||(41462321-41462457)
chr3 (120-168)||(45158518-45158566)
chr3 (144-196)||(53724135-53724187)
[»] chr5 (22 HSPs)
chr5 (62-210)||(33112161-33112309)
chr5 (62-209)||(6273128-6273276)
chr5 (62-209)||(14351893-14352041)
chr5 (62-209)||(17644161-17644309)
chr5 (64-198)||(13956932-13957066)
chr5 (62-209)||(35456507-35456655)
chr5 (57-194)||(32383859-32383996)
chr5 (62-186)||(6459707-6459831)
chr5 (62-209)||(18942249-18942397)
chr5 (62-162)||(36745870-36745970)
chr5 (62-162)||(38040623-38040723)
chr5 (62-185)||(29823257-29823380)
chr5 (62-163)||(27194774-27194875)
chr5 (62-162)||(35758035-35758135)
chr5 (62-162)||(8761097-8761197)
chr5 (62-163)||(14635345-14635446)
chr5 (62-162)||(40143904-40144004)
chr5 (62-163)||(3752454-3752555)
chr5 (61-102)||(389717-389758)
chr5 (122-174)||(23015093-23015145)
chr5 (124-163)||(26166212-26166251)
chr5 (62-139)||(17421303-17421380)
[»] chr1 (42 HSPs)
chr1 (62-209)||(33690159-33690306)
chr1 (62-209)||(32364121-32364269)
chr1 (61-209)||(3014127-3014275)
chr1 (62-207)||(49241642-49241787)
chr1 (62-198)||(3252226-3252362)
chr1 (62-198)||(44410712-44410848)
chr1 (62-195)||(962465-962598)
chr1 (62-183)||(18032287-18032408)
chr1 (106-194)||(3794189-3794277)
chr1 (62-198)||(42866278-42866414)
chr1 (62-198)||(24638702-24638835)
chr1 (62-168)||(37034875-37034981)
chr1 (62-163)||(3355400-3355501)
chr1 (62-186)||(20725983-20726107)
chr1 (62-162)||(28234799-28234899)
chr1 (62-162)||(44257770-44257870)
chr1 (122-198)||(46545440-46545516)
chr1 (114-197)||(4225048-4225131)
chr1 (122-172)||(11191403-11191453)
chr1 (61-162)||(46535277-46535370)
chr1 (62-186)||(45774760-45774880)
chr1 (62-196)||(50323330-50323464)
chr1 (62-134)||(1846926-1846998)
chr1 (62-186)||(45193178-45193302)
chr1 (106-187)||(17857925-17858006)
chr1 (62-159)||(20117850-20117947)
chr1 (122-175)||(50358956-50359009)
chr1 (114-162)||(12792714-12792762)
chr1 (62-198)||(16914457-16914593)
chr1 (142-194)||(45484228-45484280)
chr1 (131-175)||(52585217-52585261)
chr1 (88-163)||(24984170-24984245)
chr1 (62-96)||(5384835-5384869)
chr1 (125-175)||(19554184-19554234)
chr1 (64-194)||(40960183-40960313)
chr1 (120-162)||(48303206-48303248)
chr1 (125-163)||(51727119-51727157)
chr1 (122-175)||(4331948-4332001)
chr1 (106-163)||(17948617-17948674)
chr1 (120-197)||(27415198-27415275)
chr1 (62-143)||(41983794-41983875)
chr1 (62-198)||(31986052-31986188)
[»] chr7 (31 HSPs)
chr7 (62-209)||(46170641-46170789)
chr7 (58-197)||(10198303-10198442)
chr7 (62-196)||(16216974-16217108)
chr7 (62-186)||(10992695-10992819)
chr7 (62-186)||(34259253-34259377)
chr7 (62-185)||(9822519-9822642)
chr7 (62-185)||(10724444-10724567)
chr7 (64-187)||(5418899-5419018)
chr7 (61-193)||(31813487-31813619)
chr7 (62-194)||(34191874-34192006)
chr7 (62-163)||(44605934-44606035)
chr7 (62-162)||(11734245-11734345)
chr7 (117-197)||(33610645-33610725)
chr7 (62-185)||(45269430-45269553)
chr7 (62-163)||(24096722-24096823)
chr7 (62-162)||(36099691-36099791)
chr7 (62-162)||(36858133-36858233)
chr7 (57-194)||(17833661-17833797)
chr7 (122-198)||(25069358-25069434)
chr7 (62-162)||(29983235-29983335)
chr7 (62-172)||(1582155-1582265)
chr7 (62-151)||(14801974-14802063)
chr7 (62-151)||(15248966-15249055)
chr7 (62-162)||(47423453-47423545)
chr7 (62-191)||(16198683-16198811)
chr7 (64-198)||(33628226-33628360)
chr7 (62-139)||(30801677-30801754)
chr7 (114-198)||(25830139-25830223)
chr7 (128-188)||(46004153-46004212)
chr7 (62-159)||(20623149-20623246)
chr7 (114-183)||(45498883-45498951)
[»] chr8 (26 HSPs)
chr8 (71-209)||(28761636-28761775)
chr8 (62-179)||(597234-597350)
chr8 (62-182)||(32493168-32493288)
chr8 (62-197)||(36833904-36834039)
chr8 (62-163)||(42063462-42063563)
chr8 (62-162)||(19726716-19726816)
chr8 (61-162)||(30360454-30360555)
chr8 (62-162)||(40485556-40485656)
chr8 (62-162)||(41726361-41726461)
chr8 (62-198)||(18656599-18656727)
chr8 (62-162)||(13487153-13487252)
chr8 (62-185)||(8014901-8015024)
chr8 (62-159)||(3655857-3655954)
chr8 (62-162)||(31008538-31008638)
chr8 (114-198)||(39375166-39375250)
chr8 (63-198)||(44056469-44056604)
chr8 (93-186)||(6545714-6545807)
chr8 (62-159)||(14910095-14910192)
chr8 (122-198)||(4455322-4455398)
chr8 (114-162)||(5970006-5970054)
chr8 (106-186)||(29867772-29867852)
chr8 (114-162)||(36658559-36658607)
chr8 (62-151)||(26403638-26403727)
chr8 (114-170)||(20821791-20821847)
chr8 (122-186)||(45219507-45219571)
chr8 (123-170)||(31893201-31893248)
[»] chr2 (35 HSPs)
chr2 (62-209)||(16106670-16106818)
chr2 (62-195)||(6065481-6065614)
chr2 (62-198)||(35305263-35305399)
chr2 (62-209)||(21800638-21800786)
chr2 (62-198)||(37484403-37484539)
chr2 (62-185)||(19881939-19882062)
chr2 (62-185)||(32878694-32878817)
chr2 (62-187)||(10810536-10810661)
chr2 (62-162)||(24128753-24128853)
chr2 (62-168)||(3988705-3988811)
chr2 (62-159)||(17513020-17513117)
chr2 (62-162)||(16457751-16457851)
chr2 (62-162)||(23293189-23293289)
chr2 (62-162)||(39061932-39062024)
chr2 (63-162)||(31900414-31900505)
chr2 (62-187)||(12365511-12365636)
chr2 (62-162)||(7153437-7153536)
chr2 (62-162)||(37314945-37315037)
chr2 (61-199)||(39761825-39761963)
chr2 (61-162)||(39678303-39678404)
chr2 (114-194)||(26606583-26606663)
chr2 (62-198)||(27905622-27905758)
chr2 (62-185)||(23250969-23251092)
chr2 (62-162)||(29523894-29523986)
chr2 (61-184)||(29781415-29781538)
chr2 (111-163)||(14885340-14885392)
chr2 (62-157)||(18540658-18540753)
chr2 (117-187)||(20907126-20907196)
chr2 (62-168)||(22315188-22315294)
chr2 (117-187)||(24934893-24934963)
chr2 (117-187)||(25683585-25683655)
chr2 (17-59)||(29743743-29743785)
chr2 (62-162)||(37255988-37256088)
chr2 (62-198)||(40404311-40404447)
chr2 (122-186)||(43869924-43869988)
[»] chr4 (29 HSPs)
chr4 (62-209)||(19916387-19916534)
chr4 (62-209)||(4414415-4414563)
chr4 (59-198)||(8132788-8132927)
chr4 (62-198)||(25232638-25232774)
chr4 (62-208)||(6354926-6355073)
chr4 (62-198)||(1936474-1936610)
chr4 (62-162)||(23611540-23611640)
chr4 (62-198)||(43245683-43245819)
chr4 (62-190)||(54822047-54822175)
chr4 (118-209)||(7362176-7362267)
chr4 (62-162)||(11792384-11792484)
chr4 (61-185)||(24394072-24394196)
chr4 (62-198)||(55675420-55675556)
chr4 (61-198)||(12704623-12704760)
chr4 (62-198)||(26203644-26203780)
chr4 (57-191)||(24776140-24776274)
chr4 (57-162)||(28359678-28359783)
chr4 (123-191)||(2039143-2039211)
chr4 (104-172)||(38519329-38519397)
chr4 (127-197)||(18707455-18707525)
chr4 (61-191)||(44352086-44352216)
chr4 (115-163)||(7648075-7648123)
chr4 (114-162)||(55497505-55497553)
chr4 (112-198)||(38465218-38465304)
chr4 (114-163)||(13428781-13428830)
chr4 (122-186)||(293529-293593)
chr4 (58-150)||(2859415-2859507)
chr4 (62-198)||(25510487-25510623)
chr4 (59-159)||(34856004-34856104)
[»] chr6 (13 HSPs)
chr6 (62-197)||(6817290-6817425)
chr6 (62-194)||(23595691-23595823)
chr6 (62-162)||(24068200-24068300)
chr6 (62-209)||(29419724-29419863)
chr6 (62-162)||(30269593-30269693)
chr6 (61-196)||(30426317-30426452)
chr6 (62-163)||(8464281-8464382)
chr6 (62-163)||(21289551-21289651)
chr6 (117-187)||(35166055-35166125)
chr6 (114-159)||(22351258-22351303)
chr6 (114-186)||(34779909-34779981)
chr6 (131-186)||(19763413-19763468)
chr6 (64-168)||(31513370-31513474)
[»] scaffold0116 (1 HSPs)
scaffold0116 (62-207)||(7839-7974)
[»] scaffold0231 (1 HSPs)
scaffold0231 (62-159)||(11039-11136)
[»] scaffold0070 (1 HSPs)
scaffold0070 (62-162)||(12721-12821)
[»] scaffold0242 (1 HSPs)
scaffold0242 (93-163)||(17854-17924)
[»] scaffold0036 (1 HSPs)
scaffold0036 (62-163)||(51909-52010)
[»] scaffold0131 (1 HSPs)
scaffold0131 (122-198)||(7840-7916)
[»] scaffold0712 (1 HSPs)
scaffold0712 (61-209)||(4883-5031)
[»] scaffold0709 (1 HSPs)
scaffold0709 (61-209)||(4903-5051)
[»] scaffold0043 (1 HSPs)
scaffold0043 (61-184)||(64344-64467)
[»] scaffold0009 (1 HSPs)
scaffold0009 (15-59)||(147436-147480)
[»] scaffold0045 (1 HSPs)
scaffold0045 (131-175)||(29507-29551)


Alignment Details
Target: chr3 (Bit Score: 109; Significance: 6e-55; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 42907769 - 42907917
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||||| ||||| |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  42907769 catagttttaaaactcggctcggttgtcgactcggcaggggcactgggtcattaggttaatggtcgaaccactgagtcattggttgaaccgcatgactga 42907868  T
Q  162 actggattaaaccgtataactcggttagatgactcggcttaagattaac 210  Q
    || |||||||||||||| ||||||||||||||||||||||| |||||||    
T  42907869 accggattaaaccgtattactcggttagatgactcggcttaggattaac 42907917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 29727737 - 29727885
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||| |||||||||||||| | |||||||| |||||||||    
T  29727737 catagttttaaaactcggctcggtcatcgattcggcaggggtattgggtcattgggttaatggttgaaccactgagtcactagttgaaccgcatgactga 29727836  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    |  ||||||||||| ||||||| |||||||||||||| |||||||||||    
T  29727837 atcggattaaaccggataactcagttagatgactcggtcttaagattaa 29727885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 51537292 - 51537144
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||||||| ||||||| | |||||||||||||||||||||| |||| |||||||||| |||| ||||    
T  51537292 catagttttaaaactcggctcggtcatcgactcggcaggggtattgggtcactgggttaatggtcgaaccactgggtcactggttgaaccgcatgtctga 51537193  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    |  ||||||||||| |||||||||||||||||||||| |||||||||||    
T  51537192 atcggattaaaccggataactcggttagatgactcggtcttaagattaa 51537144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 53351171 - 53351294
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||||||| | ||||| ||| |||||||||| ||||||||||||| ||||||||||| |||||||||    
T  53351171 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattaggttaatggttgaaccactgagtcgttggttgaaccgcatgactga 53351270  T
Q  162 actggattaaaccgtataactcgg 185  Q
    || ||||||||||| |||||||||    
T  53351271 accggattaaaccggataactcgg 53351294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 42217264 - 42217128
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||| |  || | ||||| |||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  42217264 catagttttaaaactcggctcggtcatcgactcggtaaaggtactgggtcattgagttaatggtcgaaccactgagtcactggttgaaccgcatgactga 42217165  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |  ||||||||||| ||||||||| ||||||||||||    
T  42217164 atcggattaaaccgaataactcggctagatgactcgg 42217128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 15100604 - 15100740
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||| || |||| |||  | ||  ||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  15100604 catagttttaaaactcggctcgatcatcgactcgataaggatattgggtcattgggttaatggtcgaaccactgagtcactgattgaaccgcatgactga 15100703  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |  ||||||||||| ||||||||| || |||||||||    
T  15100704 atcggattaaaccgaataactcggctaaatgactcgg 15100740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 23241965 - 23241865
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| |||| ||||| |||| ||||||| | ||||| ||||||||||||||||| |||||||| ||||| |||||||||    
T  23241965 catagttttaaaattcggctcggtcatcgactcggcgggggtattgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactga 23241866  T
Q  162 a 162  Q
    |    
T  23241865 a 23241865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 30465189 - 30465089
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| |||| ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  30465189 catagttttaaaattcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 30465090  T
Q  162 a 162  Q
    |    
T  30465089 a 30465089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 35054812 - 35054676
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||| ||| | ||||| | || |||||||||||||||| || |||| |||||||||| |||||||||    
T  35054812 catagttttaaaactcggctcggtcatcgactcggcatgggtactgggtcagtgagttaatggtcgaaccattgggtcactggttgaaccgcatgactga 35054713  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    || | ||||||||  |||||||| | || ||||||||    
T  35054712 accgaattaaaccaaataactcgataagttgactcgg 35054676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 55258190 - 55258087
Alignment:
Q  59 atacatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgac 158  Q
    |||||||||||||||| ||||||||||| |||| ||||  |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| ||||||    
T  55258190 atacatagttttaaaactcggctcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgac 55258091  T
Q  159 tgaa 162  Q
    ||||    
T  55258090 tgaa 55258087  T

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Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 37599976 - 37599876
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| | ||| |||| | ||||| | ||| | |||||||||||||||||||||||||| ||||| |||||||||    
T  37599976 catagttttaaaactcggctcggtcatcgacttggcgggggtactgggtcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 37599877  T
Q  162 a 162  Q
    |    
T  37599876 a 37599876  T

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Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 39850695 - 39850795
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | | ||| | ||||| |||||||||||||||||||||||||| ||||| ||||| |||    
T  39850695 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgattga 39850794  T
Q  162 a 162  Q
    |    
T  39850795 a 39850795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 33634883 - 33634978
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatga 157  Q
    ||||||||||||| |||| ||| || |||| ||||| |||| | ||||||| ||||| |||||||||||||||||||||||||| ||||| |||||    
T  33634883 catagttttaaaactcggttcgatcatcgactcggcgggggtactgggttaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatga 33634978  T

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Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 11412594 - 11412513
Alignment:
Q  63 atagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattgg 144  Q
    |||||||||||| ||||||||||| |||| |||||| ||| ||||||| | ||||| | |||||||||||||||||||||||    
T  11412594 atagttttaaaactcggctcggtcatcgactcggcaagggtattgggtcactgggtcattggtcgaaccactgagtcattgg 11412513  T

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Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 29025259 - 29025360
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| || |||||||| |||| ||||| |||| | ||||| | ||||| |||||| |||||| |||||||||||| ||||| |||||||||    
T  29025259 catagttttaaaactcagctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggttgaaccagtgagtcattggtcgaaccgcatgactga 29025358  T
Q  162 ac 163  Q
    ||    
T  29025359 ac 29025360  T

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Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 2849367 - 2849268
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||  |||  | ||||| | |||||||||||||||| || |||||||||||| ||||| |||||||||    
T  2849367 catagttttaaaactcggctcggtcatcgactcggt-gggatactgggtcaatgggttaatggtcgaatcattgagtcattggtcgaaccgcatgactga 2849269  T

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Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 26725552 - 26725644
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||||| ||| ||||        |||||||| ||||||||||||||||||| |||||| ||||| |||||||||    
T  26725552 catagttttaaaactcggctcggtcatcgatttggcggggg--------tattgggtcaatggtcgaaccactgagttattggtcgaaccgcatgactga 26725643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 10259297 - 10259228
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaacc 131  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | ||||||||||||||||||    
T  10259297 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggttaatggtcgaacc 10259228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 11018705 - 11018825
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||  |||| | ||||| | ||| | |||  || ||||| |||||||||||| ||||| ||| |||||    
T  11018705 catagttttaaaactcggctcggtcatcgactcggt-ggggtactgggtcactggatcaataatcaaaccagtgagtcattggtcgaaccgcataactga 11018803  T
Q  162 actggattaaaccgtataactc 183  Q
    || ||||||||||| |||||||    
T  11018804 accggattaaaccggataactc 11018825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 44832455 - 44832539
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    ||||| |||||||||||||| ||||||||||| ||||| ||||||||||| |||   |  || ||||||||||||||| ||||||    
T  44832455 tgggtcaatggtcgaaccaccgagtcattggtcgaaccgcatgactgaaccggaaccactcggataactcggttagataactcgg 44832539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 5123819 - 5123889
Alignment:
Q  127 gaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcg 197  Q
    |||||| |||||||||||||||||| ||||| |||||||||| ||  || || |||||||||||| |||||    
T  5123819 gaaccattgagtcattggttgaaccgcatgaatgaactggatcaactcggatgactcggttagataactcg 5123889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 52404401 - 52404317
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    ||||| ||||||| |||||||||||||||||| ||||| ||||| | ||| |||| ||  || || |||||||||||| ||||||    
T  52404401 tgggtcaatggtcaaaccactgagtcattggtcgaaccgcatgattaaaccggatcaactcggatgactcggttagataactcgg 52404317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 3046499 - 3046579
Alignment:
Q  117 gttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    ||||| |||||||||||||  ||| | |||||||| |||||||||||  |||||||| | |||||||||| || ||||||||    
T  3046499 gttaacggtcgaaccactggatcactagttgaaccgcatgactgaac-cgattaaactgaataactcggtaagttgactcgg 3046579  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 11676334 - 11676262
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccact 134  Q
    |||||||||||||| | ||||||||| |||| ||||| |||| | ||||| | ||||| |||||||||||||||    
T  11676334 acatagttttaaaacttggctcggtcatcgactcggc-ggggtactgggtcaatgggtcaatggtcgaaccact 11676262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 11574994 - 11575118
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||| |||| || |||| ||||||  || | ||||| ||||  |  ||||||||||||  | ||||||||||||||| | |||||||    
T  11574994 catagttttaaaactcgactcgatcatcgactcggcataggtactgggtcattgaatcgatggtcgaaccatcgggtcattggttgaaccgcgtgactga 11575093  T
Q  162 actggattaaaccgtataactcggt 186  Q
    |  |||| |||||| || |||||||    
T  11575094 atcggatcaaaccggatgactcggt 11575118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 41459715 - 41459667
Alignment:
Q  124 gtcgaaccactgagtcattggttgaaccacatgactgaactggattaaa 172  Q
    ||||||||| || ||||||||| ||||| ||||||||||||| ||||||    
T  41459715 gtcgaaccattgggtcattggtcgaaccgcatgactgaactgtattaaa 41459667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 41462457 - 41462321
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||| ||  || | ||||| | || ||  ||||||||||||  | |||| | |||||||| |||||||||    
T  41462457 catagttttaaaactcggctcggtcatcgactcgacataggtactgggtcactgagtcgatggtcgaaccatcgggtcacttgttgaaccgcatgactga 41462358  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |   |||||||||| || | ||||| |||| ||||||    
T  41462357 atctgattaaaccggatgattcggtaagataactcgg 41462321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 45158518 - 45158566
Alignment:
Q  120 aatggtcgaaccactgagtcattggttgaaccacatgactgaactggat 168  Q
    |||||| ||||||| ||||||||||| ||||| ||||||||||| ||||    
T  45158518 aatggttgaaccaccgagtcattggtcgaaccgcatgactgaaccggat 45158566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 53724135 - 53724187
Alignment:
Q  144 gttgaaccacatgactgaactggattaaaccgtataactcggttagatgactc 196  Q
    ||||||||  ||||||||| |||||||||||  ||||||||| ||||||||||    
T  53724135 gttgaaccgaatgactgaattggattaaaccaaataactcggatagatgactc 53724187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 62 - 210
Target Start/End: Complemental strand, 33112309 - 33112161
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||| |||||| |||||||||||| ||||||  |||||||||    
T  33112309 catagttttaaaactcggctcggtcgtcgattcggcaggggcactgagttattggattaatgatcgaactactgagtcattgattgaactgcatgactga 33112210  T
Q  162 actggattaaaccgtataactcggttagatgactcggcttaagattaac 210  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  33112209 actggattaaaccgtataactcggttagatgactctgtttaggattaac 33112161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 6273128 - 6273276
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||    
T  6273128 catagttttaaaactcggctcggtcatcgactcggcaggggcactgggttattgggttaatggtcgaaccactgagtcaatggtcgaaccgtatgactga 6273227  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    || |||| |||||| |||||||||||||||||||||| |||||||||||    
T  6273228 accggatcaaaccgaataactcggttagatgactcggccttaagattaa 6273276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 14352041 - 14351893
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||| ||||||||||| | | || |||||||||||||||||||||||||| |||||||| |||||||||    
T  14352041 catagttttaaaactcggctcggtcatcgactcggtaggggcattggatcagtgagttaatggtcgaaccactgagtcattagttgaaccgcatgactga 14351942  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    |  ||||||||||| |||||||||||| ||||| ||| |||||||||||    
T  14351941 atcggattaaaccggataactcggttatatgacccggtcttaagattaa 14351893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 17644309 - 17644161
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||| ||||||| ||||||||| ||||| || |||| | ||||| ||||||||||||||||  ||| |||| |||||||||||||||    
T  17644309 catagttttaaaactcgactcggtcatcgattcggtaggggtatcgggtcactgggtcaatggtcgaaccactggatcaatggtcgaaccacatgactga 17644210  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    |  |||||||| || |||||||||||| ||||||||| |||||||||||    
T  17644209 atcggattaaatcggataactcggttaaatgactcggtcttaagattaa 17644161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 198
Target Start/End: Original strand, 13956932 - 13957066
Alignment:
Q  64 tagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    ||||||||||| ||||||||||| |||| ||||||  || | ||||| | || |||||||||||||||||||||||| |||||||||| |||||||||||    
T  13956932 tagttttaaaactcggctcggtcatcgactcggcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaac 13957031  T
Q  164 tggattaaaccgtataactcggttagatgactcgg 198  Q
     ||||||||||| |||||||| | || ||||||||    
T  13957032 cggattaaaccgaataactcgataagttgactcgg 13957066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 35456507 - 35456655
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| || | | || ||||| | ||| | ||||| | ||||||||||||||||||||| |||||||||| |||||||||    
T  35456507 catagttttaaaactcggctcggtcatcaacttgggaggggtactggttcattggatcaatggtcgaaccactgagtcactggttgaaccgcatgactga 35456606  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    |  ||||||||||| |||||||||||| |||||| || |||||||||||    
T  35456607 atcggattaaaccggataactcggttaaatgacttggtcttaagattaa 35456655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 57 - 194
Target Start/End: Complemental strand, 32383996 - 32383859
Alignment:
Q  57 atatacatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatg 156  Q
    |||| ||||||||||||| ||||||||||| |||| |||  ||||  | ||||| | | |||||||| | ||||||||| ||||||||||||||| ||||    
T  32383996 atatgcatagttttaaaactcggctcggtcatcgactcgatagggatactgggtcactaggttaatgattgaaccactgtgtcattggttgaaccgcatg 32383897  T
Q  157 actgaactggattaaaccgtataactcggttagatgac 194  Q
    |||||| |||||||||||| |||||||||| |||||||    
T  32383896 actgaattggattaaaccgaataactcggtaagatgac 32383859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 6459707 - 6459831
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| || ||||||||||||| |||||| ||| | ||||| | || ||||||||||||||||||| |||| |||||||||| |||||||||    
T  6459707 catagttttaaaactcagctcggtcgtcgactcggcatgggtactgggtcaatgagttaatggtcgaaccactgggtcactggttgaaccgcatgactga 6459806  T
Q  162 actggattaaaccgtataactcggt 186  Q
    |  ||||||||||  ||||||||||    
T  6459807 atcggattaaaccagataactcggt 6459831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 18942249 - 18942397
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||| ||||| |  |||| | ||||| ||||||||||||||||  | | |||||||||| |||||||||    
T  18942249 catagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaaccactggatgactggttgaaccgcatgactga 18942348  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    |  |||||||| || ||||||| |||| ||||||||| |||||||||||    
T  18942349 atcggattaaatcggataactcagttaaatgactcggtcttaagattaa 18942397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 36745970 - 36745870
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||||||||| || | | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  36745970 catagttttaaaactcggctcggtcatcgattcggcgggagtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 36745871  T
Q  162 a 162  Q
    |    
T  36745870 a 36745870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 38040623 - 38040723
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||||||||| | || | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  38040623 catagttttaaaactcggctcggtcatcgattcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 38040722  T
Q  162 a 162  Q
    |    
T  38040723 a 38040723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 29823257 - 29823380
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| |||| ||||| |||| | ||||| | | ||| ||||||||||||| ||| |||||| | ||||| ||| |||||    
T  29823257 catagttttaaaattcggctcggtcatcgactcggcgggggtactgggtcactaggtcaatggtcgaaccagtgaatcattgatcgaaccgcataactga 29823356  T
Q  162 actggattaaaccgtataactcgg 185  Q
    || ||||||||||| |||||||||    
T  29823357 accggattaaaccggataactcgg 29823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 27194875 - 27194774
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||||| ||||| ||| || ||||||||| ||||||||| |||||||||||||||    
T  27194875 catagttttaaaactcggctcggtcatcgactcggctggggtactgggttaatgggtcaatagttgaaccactgtgtcattggtcgaaccacatgactga 27194776  T
Q  162 ac 163  Q
    ||    
T  27194775 ac 27194774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 35758035 - 35758135
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| | || | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  35758035 catagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcagtgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 35758134  T
Q  162 a 162  Q
    |    
T  35758135 a 35758135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 8761197 - 8761097
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||| |||||| |||| ||||| |||| | ||||| | | ||| |||||||||||||||||||||||||| ||||| |||||||||    
T  8761197 catagttttaaaactcggatcggtcatcgactcggcgggggtactgggtcaataggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 8761098  T
Q  162 a 162  Q
    |    
T  8761097 a 8761097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 14635345 - 14635446
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||| | | ||||||||||| |||| ||||| |||| | ||||| | ||||| ||||||||||||| |||||||||||| ||||| |||||||||    
T  14635345 catagttttcagaatcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactga 14635444  T
Q  162 ac 163  Q
    ||    
T  14635445 ac 14635446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 40143904 - 40144004
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| | |  | || || | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  40143904 catagttttaaaactcggctcggtcatcgactcggcggagaaactgagtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 40144003  T
Q  162 a 162  Q
    |    
T  40144004 a 40144004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 3752454 - 3752555
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||| | | ||||||||||| |||| ||||| |||| | ||||| | ||||| |||||||||| || |||||||||||| ||||| |||||||||    
T  3752454 catagttttcagaatcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaagcagtgagtcattggtcgaaccgcatgactga 3752553  T
Q  162 ac 163  Q
    ||    
T  3752554 ac 3752555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 389758 - 389717
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcagggg 102  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  389758 acatagttttaaaactcggctcggtcatcgattcggcagggg 389717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 23015093 - 23015145
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaacc 174  Q
    ||||||||||| || ||||||||||||||| ||||||||||| | ||||||||    
T  23015093 tggtcgaaccattgggtcattggttgaaccgcatgactgaaccgtattaaacc 23015145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 26166251 - 26166212
Alignment:
Q  124 gtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  26166251 gtcgaaccactgagtcattggtcgaaccgcatgactgaac 26166212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 17421303 - 17421380
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtc 139  Q
    ||||||||||||| ||||||||||| |||| |||  ||||| ||||| | |||| || | || |||||||||||||||    
T  17421303 catagttttaaaactcggctcggtcatcgactcgagaggggtattggatcattgagtcattgatcgaaccactgagtc 17421380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 33690159 - 33690306
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||||||| | ||||| |||||||||||||||||||||||||||| ||||||||||| ||||| |||    
T  33690159 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggttaatggtcgaaccactgagtcgttggttgaaccgcatgattga 33690258  T
Q  162 actggattaaaccgtataactcggttagatgactcggcttaagattaa 209  Q
    |  ||||||||||| |||||||||||||||||||||||||| ||||||    
T  33690259 atcggattaaaccgaataactcggttagatgactcggcttaggattaa 33690306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 32364121 - 32364269
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| |||| ||| |||||| |||||||   |||||||||||||||||||||| |||| |||||||||| |||||||||    
T  32364121 catagttttaaaattcggctcggtcatcgactcgacaggggtattgggtcgctgggttaatggtcgaaccactgggtcactggttgaaccgcatgactga 32364220  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    |  ||||||||||| |||||||||||||||||||||| |||||||||||    
T  32364221 atcggattaaaccggataactcggttagatgactcggtcttaagattaa 32364269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 3014275 - 3014127
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||| ||| |||| |  |||| |||||||||| | ||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  3014275 acatagttttaaaactcgtctcgtta-tcgactcggcaggggtactgggtcactggattaatggtcgaaccactgagtcattggttgaaccacatgactg 3014177  T
Q  161 aactggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    ||| ||||||||||| |||||||||||| ||||| ||| |||||||||||    
T  3014176 aaccggattaaaccgaataactcggttaaatgacccggtcttaagattaa 3014127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 207
Target Start/End: Original strand, 49241642 - 49241787
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| |||||||| |||||  | ||| | |||||||||||||||||||||| ||||| ||||||||||| |||| ||||    
T  49241642 catagttttaaaattcggctcggtcatcgattcgacagggatactggatcattgggttaatggtcgaaccaccgagtcgttggttgaaccgcatggctga 49241741  T
Q  162 actggattaaaccgtataactcggttagatgactcggcttaagatt 207  Q
    ||  |||||||||  |||||||||||||| ||||||||||| ||||    
T  49241742 acctgattaaaccaaataactcggttagacgactcggcttaggatt 49241787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 3252226 - 3252362
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||| || || | ||||| | || ||||||||| |||||||||||||| |||||||||| |||||||||    
T  3252226 catagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcactggttgaaccgcatgactga 3252325  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    || ||||||||||| ||||||||| ||| ||||||||    
T  3252326 accggattaaaccggataactcggctagttgactcgg 3252362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 44410712 - 44410848
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||| |||||| |||| |||||| ||| | ||||| | ||||||||||||||||||||||||||| |||||||||| ||||||| |    
T  44410712 catagttttaaaactcggttcggtcatcgactcggcaagggtactgggtcactgggttaatggtcgaaccactgagtcactggttgaaccgcatgactaa 44410811  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |   |||||||||| ||||||||| ||||||||||||    
T  44410812 atcagattaaaccgaataactcggctagatgactcgg 44410848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 195
Target Start/End: Complemental strand, 962598 - 962465
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||||  || | | ||| | |  |||||||||||||||||||||||| ||||||||||||||||||||    
T  962598 catagttttaaaactcggctcggtcatcgactcggcataggtactaggtcaataagttaatggtcgaaccactgagtcactggttgaaccacatgactga 962499  T
Q  162 actggattaaaccgtataactcggttagatgact 195  Q
    || ||||||||||| |||||||||| || |||||    
T  962498 accggattaaaccgaataactcggtaagttgact 962465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 18032287 - 18032408
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||||||||||| |||||| ||| | ||| | | || |||||||||||||||||||||||| |||||||||  |||||||||    
T  18032287 catagttttaaaactcggctcggtcgtcgactcggcatgggtactggatcaatgagttaatggtcgaaccactgagtcactggttgaactgcatgactga 18032386  T
Q  162 actggattaaaccgtataactc 183  Q
    | |||||||||||| |||||||    
T  18032387 attggattaaaccggataactc 18032408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 3794189 - 3794277
Alignment:
Q  106 tgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgac 194  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||| | ||||||||||||||||||    
T  3794189 tgggtcattgggttaatggtcgaaccactgagtcattggttgaaccgcatgactgaaccagtttaaactgaataactcggttagatgac 3794277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 42866278 - 42866414
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  42866278 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 42866377  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    || ||| | |  || || |||||||||||| ||||||    
T  42866378 accggaatcactcggatgactcggttagataactcgg 42866414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 24638702 - 24638835
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| || |||||||| |||| |||||| ||| | ||||| | || ||||||||||||||   || |||| |||||||||| |||||||||    
T  24638702 catagttttaaaactcagctcggtcatcgactcggcatgggtagtgggtcagtgagttaatggtcgaac---tgggtcactggttgaaccgcatgactga 24638798  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |||||||||||||| |||||||||| || ||||||||    
T  24638799 actggattaaaccgaataactcggtaagttgactcgg 24638835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 37034981 - 37034875
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||| || |||| |||||| ||| | ||||||| ||||| |||||||||||||||| ||||||||| ||||| |||||||||    
T  37034981 catagttttaaaactcggctcgatcatcgactcggcatgggtactgggttactgggtcaatggtcgaaccactgggtcattggtcgaaccgcatgactga 37034882  T
Q  162 actggat 168  Q
    || ||||    
T  37034881 accggat 37034875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 3355400 - 3355501
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| |||| ||||| |||  | ||||| | ||||| |||||||||| ||||||||||||||| ||||| |||||||||    
T  3355400 catagttttaaaattcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaatcactgagtcattggtcgaaccgcatgactga 3355499  T
Q  162 ac 163  Q
    ||    
T  3355500 ac 3355501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 20725983 - 20726107
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||| || ||  | ||||| | || |||||||||||||||||||| ||| |||||||||  |||||||||    
T  20725983 catagttttaaaactcggctcggtcatcgactcgacatggatactgggtcaatgagttaatggtcgaaccactgactcactggttgaactgcatgactga 20726082  T
Q  162 actggattaaaccgtataactcggt 186  Q
    |  |||||||||||||| |||||||    
T  20726083 atcggattaaaccgtatgactcggt 20726107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 28234799 - 28234899
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| | || ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  28234799 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 28234898  T
Q  162 a 162  Q
    |    
T  28234899 a 28234899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 44257770 - 44257870
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | || || |||||||||||||| ||||||||||| ||||| |||||||||    
T  44257770 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccaccgagtcattggtcgaaccgcatgactga 44257869  T
Q  162 a 162  Q
    |    
T  44257870 a 44257870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 46545440 - 46545516
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    |||||||||||||||||||||||||||||| ||||||||||| | |||||| || |||||||||||  |||||||||    
T  46545440 tggtcgaaccactgagtcattggttgaaccgcatgactgaaccgtattaaatcggataactcggttgtatgactcgg 46545516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 4225131 - 4225048
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcg 197  Q
    ||||| |||||||||||||||||||||||||||||||| ||| ||||||| |||| ||  || || |||||||||||| |||||    
T  4225131 tgggtcaatggtcgaaccactgagtcattggttgaaccgcataactgaaccggatcaactcggatgactcggttagataactcg 4225048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 11191453 - 11191403
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaa 172  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  11191453 tggtcgaaccactgagtcattggttgaaccacatgactgaaccgtattaaa 11191403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 46535370 - 46535277
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||| ||||||||||| |||| ||||| ||||        || ||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  46535370 acatagttttaaaactcggctcggtcatcgactcggcggggg--------tactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 46535279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 45774760 - 45774880
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||| ||| || |||| |||||||| | | ||| | |||||||||||| |||| |    ||||||||| |||| || |||||||||    
T  45774760 catagttttaaaactcggttcgatcatcgactcggcaggtgtactggatcattgggttaatgatcgacc----gagtcattgattgagccgcatgactga 45774855  T
Q  162 actggattaaaccgtataactcggt 186  Q
    || ||||||||||| ||||||||||    
T  45774856 accggattaaaccgaataactcggt 45774880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 50323330 - 50323464
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||| ||||| ||||| |||| | ||  | ||||| | ||||||| ||||||||||| |  |||| |||| ||||| |||||  ||    
T  50323330 catagttttaaaactcggttcggttgtcgactcggtaaggatactgggtcactgggttattggtcgaaccattaggtcactggtcgaaccgcatgataga 50323429  T
Q  162 actggattaaaccgtataactcggttagatgactc 196  Q
    || |||||||||||  | |||||||||||||||||    
T  50323430 accggattaaaccggttgactcggttagatgactc 50323464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 1846998 - 1846926
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccact 134  Q
    ||||||||||||| |||||||| || |||| ||||| | || | ||||||| |||||||||||||||||||||    
T  1846998 catagttttaaaactcggctcgatcatcgactcggcggaggtactgggttaatgggttaatggtcgaaccact 1846926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 45193302 - 45193178
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||| || |||| |||||| |||   ||||| | ||||| | ||||||||||||||| ||||| || ||||| |||||| ||    
T  45193302 catagttttaaaactcggctcgatcatcgactcggcaagggtgctgggtcactgggtcattggtcgaaccactgaatcattagtcgaaccgcatgaccga 45193203  T
Q  162 actggattaaaccgtataactcggt 186  Q
    |  ||||| ||||| || |||||||    
T  45193202 atcggattgaaccggatgactcggt 45193178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 17857925 - 17858006
Alignment:
Q  106 tgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggtt 187  Q
    ||||||| || || ||||||  |||||||  |||||||||||||| ||||||||||||  ||||| |||| |||||||||||    
T  17857925 tgggttactgagtcaatggttcaaccactaggtcattggttgaactacatgactgaaccagattataccggataactcggtt 17858006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 20117947 - 20117850
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgact 159  Q
    |||||||||||||   ||||||||| || | |||| ||||  | || || ||||||| ||||||||||||| ||||| |||||||||||| |||||||    
T  20117947 catagttttaaaaactggctcggtcatcaactcggtagggatactgagtcattgggtcaatggtcgaaccattgagttattggttgaaccgcatgact 20117850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 50359009 - 50358956
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccg 175  Q
    ||||||||||||||| |||||||| ||||| |||||||||| || |||||||||    
T  50359009 tggtcgaaccactgaatcattggtcgaaccgcatgactgaattgaattaaaccg 50358956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 12792714 - 12792762
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaa 162  Q
    ||||| |||||||||||||| ||||||||||| ||||| ||||||||||    
T  12792714 tgggtcaatggtcgaaccaccgagtcattggtcgaaccgcatgactgaa 12792762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 16914593 - 16914457
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||  | |||| |||  || | |||||||| | |||||  ||||||||||||||| |||| |  ||||||| |||||||||    
T  16914593 catagttttaaaactcggctcgaccatcgactcgatagagacattgggtcactgggtcgatggtcgaaccactgggtcactaattgaaccgcatgactga 16914494  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |  |||| ||| || || |||| ||||||| ||||||    
T  16914493 atcggatcaaatcggatgactcagttagataactcgg 16914457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 45484228 - 45484280
Alignment:
Q  142 tggttgaaccacatgactgaactggattaaaccgtataactcggttagatgac 194  Q
    |||||||||| ||||||||||  ||||||||||| ||||||||||||| ||||    
T  45484228 tggttgaaccgcatgactgaatcggattaaaccggataactcggttaggtgac 45484280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 52585217 - 52585261
Alignment:
Q  131 cactgagtcattggttgaaccacatgactgaactggattaaaccg 175  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||    
T  52585217 cactgagtcattggtcgaaccgcatgactgaaccggattaaaccg 52585261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 24984245 - 24984170
Alignment:
Q  88 tcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    |||| ||||| |||| | ||||| | ||||| ||||||||||| | |||||||||||| ||||| |||||||||||    
T  24984245 tcgactcggcgggggtactgggtcaatgggtcaatggtcgaactagtgagtcattggtcgaaccgcatgactgaac 24984170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 5384869 - 5384835
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcgg 96  Q
    ||||||||||||||||||||||||| |||||||||    
T  5384869 catagttttaaaattcggctcggtcatcgattcgg 5384835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 19554234 - 19554184
Alignment:
Q  125 tcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccg 175  Q
    |||||||||||| |||||||| |||||  |||||||||||| |||||||||    
T  19554234 tcgaaccactgaatcattggtcgaaccgtatgactgaactgaattaaaccg 19554184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 40960313 - 40960183
Alignment:
Q  64 tagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    |||||||||||||| | |||||| |||| || ||||||  ||||||| |  | ||||||||||||| |||||| ||| |||||||| |   ||||||||     
T  40960313 tagttttaaaattcagttcggtcatcgactcagcagggatattgggtcaacgagttaatggtcgaatcactgaatcactggttgaatcgtttgactgaat 40960214  T
Q  164 tggattaaaccgtataactcggttagatgac 194  Q
      |||||||  | |||||||||||| |||||    
T  40960213 cagattaaattgaataactcggttacatgac 40960183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 48303248 - 48303206
Alignment:
Q  120 aatggtcgaaccactgagtcattggttgaaccacatgactgaa 162  Q
    ||||||||||||||||||||||| || ||||| ||||||||||    
T  48303248 aatggtcgaaccactgagtcattagtggaaccgcatgactgaa 48303206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 51727119 - 51727157
Alignment:
Q  125 tcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  51727119 tcgaaccattgagtcattggttgaaccgcatgactgaac 51727157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 4332001 - 4331948
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccg 175  Q
    |||| ||||||||| ||||||||||||||| ||||||| ||  |||||||||||    
T  4332001 tggttgaaccactgggtcattggttgaaccgcatgactaaatcggattaaaccg 4331948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 17948674 - 17948617
Alignment:
Q  106 tgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    ||||||| || |||||||||  ||||||| ||||||| ||||||| ||||||||||||    
T  17948674 tgggttactgagttaatggttcaaccactaagtcattagttgaactacatgactgaac 17948617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 27415275 - 27415198
Alignment:
Q  120 aatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcg 197  Q
    |||||| |||||||||  |||||||||||||| || |||||||  | ||| ||||| || ||||||||| ||||||||    
T  27415275 aatggttgaaccactggatcattggttgaaccgcacgactgaatcgaattgaaccgaatgactcggttatatgactcg 27415198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 41983875 - 41983794
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattg 143  Q
    ||||||||||||| ||||||||||| || | || ||| ||| | || || | || |||||||||||||||| ||||||||||    
T  41983875 catagttttaaaactcggctcggtcatcaactcagcatgggtactgagtcagtgagttaatggtcgaaccattgagtcattg 41983794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 31986188 - 31986052
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||  |||||||||| |||| | |||   ||||| | ||| | | |||| ||||||||| ||||||||||||||| ||  |||||    
T  31986188 catagttttaaaactcggaccggtcgtcgactcggtaagggtgctgggtcactggttcattggttgaaccactgggtcattggttgaaccgcacaactga 31986089  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |  ||||| ||||| || ||||| | | |||||||||    
T  31986088 atcggattgaaccggatgactcgatcatatgactcgg 31986052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 46170641 - 46170789
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| |||| ||||||||| || ||||| ||||||||||||||||||||||||||||| |||| ||||| ||||| |||    
T  46170641 catagttttaaaattcggctcggtcatcgactcggcagggacactgggtcattgggttaatggtcgaaccactgagtcaatggtcgaaccgcatgaatga 46170740  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    || |||| |||||| |||||||||||||||||||||| |||||||||||    
T  46170741 accggatcaaaccgaataactcggttagatgactcggccttaagattaa 46170789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 10198303 - 10198442
Alignment:
Q  58 tatacatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatga 157  Q
    |||| |||||||||||| ||||||||||| |||| |||||||||| ||||| | | ||||| |||||||||||||||||||||||||| ||||| |||||    
T  10198303 tataaatagttttaaaactcggctcggtcatcgactcggcaggggtattggatcactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatga 10198402  T
Q  158 ctgaactggattaaaccgtataactcggttagatgactcg 197  Q
    |||||| |||| ||  || || |||||||||||| |||||    
T  10198403 ctgaaccggatcaactcggatgactcggttagataactcg 10198442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 16217108 - 16216974
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| || ||| ||| ||||||| | ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  16217108 catagttttaaaactcggctcggtcatcgactcagcatgggtattgggtcactgggtcaatggtcgaaccactgagtcattggtcgaaccacatgactga 16217009  T
Q  162 actggattaaaccgtataactcggttagatgactc 196  Q
    || |||| ||  || || |||||||||||| ||||    
T  16217008 accggatcaactcggatgactcggttagataactc 16216974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 10992819 - 10992695
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||| |||||| |||||||||| | ||||| | || |||||||||||||||||| ||||| |||||||||  |||||||||    
T  10992819 catagttttaaaactcggctcggccgtcgactcggcaggggtactgggtcaatgagttaatggtcgaaccactaagtcactggttgaactgcatgactga 10992720  T
Q  162 actggattaaaccgtataactcggt 186  Q
    |  ||||||||||| ||||||||||    
T  10992719 atcggattaaaccggataactcggt 10992695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 34259377 - 34259253
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||||||||||| |||||| ||| ||| ||| | || |||||||||||||||||||||||| |||||||||| |||||||||    
T  34259377 catagttttaaaactcggctcggtcgtcgactcggcatgggtattaggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactga 34259278  T
Q  162 actggattaaaccgtataactcggt 186  Q
    |  | |||||| || ||||||||||    
T  34259277 atcgaattaaatcggataactcggt 34259253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 9822519 - 9822642
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||| || |||||||||| |||| ||||||| | || || ||||||||||||| |||||||||||| ||||| ||| |||||    
T  9822519 catagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 9822618  T
Q  162 actggattaaaccgtataactcgg 185  Q
    || ||||||||||| |||||||||    
T  9822619 accggattaaaccggataactcgg 9822642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 10724444 - 10724567
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||| || |||||||||| |||| ||||||| | || || ||||||||||||| |||||||||||| ||||| ||| |||||    
T  10724444 catagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 10724543  T
Q  162 actggattaaaccgtataactcgg 185  Q
    || ||||||||||| |||||||||    
T  10724544 accggattaaaccggataactcgg 10724567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 5418899 - 5419018
Alignment:
Q  64 tagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    ||||||||||| ||||||||||| |||| ||||||| || | ||||||| ||||||||||||||||||||||||||| ||||||||||    |||||||     
T  5418899 tagttttaaaactcggctcggtcatcgactcggcagaggtactgggttaatgggttaatggtcgaaccactgagtcactggttgaacc----gactgaat 5418994  T
Q  164 tggattaaaccgtataactcggtt 187  Q
     ||||||||||| |||||||||||    
T  5418995 cggattaaaccgaataactcggtt 5419018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 31813487 - 31813619
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||| ||| ||||||| |||| |||||||||| | ||| | | ||||||||||||||||||||||||||| ||||||||   ||||| ||    
T  31813487 acatagttttaaaactcgactcggtcatcgactcggcaggggtactggttcaatgggttaatggtcgaaccactgagtcagtggttgaattgcatgattg 31813586  T
Q  161 aactggattaaaccgtataactcggttagatga 193  Q
    ||  | ||||||||| |||||||||||||||||    
T  31813587 aatcgaattaaaccgaataactcggttagatga 31813619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 34192006 - 34191874
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||  |||| || ||||||| | ||| | | |||||| ||||||||||||||||||||||||||||||| ||||||| |    
T  34192006 catagttttaaaactcggctcggtgatcgactctgcaggggtactggatcactgggttgatggtcgaaccactgagtcattggttgaaccgcatgactaa 34191907  T
Q  162 actggattaaaccgtataactcggttagatgac 194  Q
    |  ||||||||||  ||||||||| ||||||||    
T  34191906 atcggattaaaccaaataactcggctagatgac 34191874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 44606035 - 44605934
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| |||| ||||| |||| | ||||| | ||||| |||||| ||||||||||||||||||| ||||| |||||||||    
T  44606035 catagttttaaaattcggctcggtcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 44605936  T
Q  162 ac 163  Q
    ||    
T  44605935 ac 44605934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 11734345 - 11734245
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  11734345 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 11734246  T
Q  162 a 162  Q
    |    
T  11734245 a 11734245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 33610645 - 33610725
Alignment:
Q  117 gttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcg 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||  |||||||||||||||||||||    
T  33610645 gttaatggtcgaaccactgagtcattggttgaaccgcatgactgaatcagattaaaccaaataactcggttagatgactcg 33610725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 45269553 - 45269430
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| | || | ||||| | ||||| ||||||||||||| |||||||||||| ||||| ||| |||||    
T  45269553 catagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcactgggtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 45269454  T
Q  162 actggattaaaccgtataactcgg 185  Q
    |  ||||||||||| |||||||||    
T  45269453 atcggattaaaccggataactcgg 45269430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 24096823 - 24096722
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||| |||||| ||||||||||||||| | ||||| | ||| | |||||||||||||||||||||||||| ||||| |||| ||||    
T  24096823 catagttttaaaactcggttcggtcatcgattcggcaggggtactgggtcactggatcaatggtcgaaccactgagtcattggtcgaaccgcatgtctga 24096724  T
Q  162 ac 163  Q
    ||    
T  24096723 ac 24096722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 36099791 - 36099691
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| | || ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  36099791 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 36099692  T
Q  162 a 162  Q
    |    
T  36099691 a 36099691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 36858133 - 36858233
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||  | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  36858133 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 36858232  T
Q  162 a 162  Q
    |    
T  36858233 a 36858233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 57 - 194
Target Start/End: Original strand, 17833661 - 17833797
Alignment:
Q  57 atatacatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatg 156  Q
    |||| ||||||||||||||||||  ||||| |||| |||  ||||| | ||| | ||| |||||||| ||||||||||||||| |||||||| || ||||    
T  17833661 atatccatagttttaaaattcggtacggtcatcgactcgataggggtactgg-tcattaggttaatgatcgaaccactgagtcgttggttgagccgcatg 17833759  T
Q  157 actgaactggattaaaccgtataactcggttagatgac 194  Q
    |||||||  || ||||||| |||||||||| |||||||    
T  17833760 actgaaccagactaaaccggataactcggtaagatgac 17833797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 25069358 - 25069434
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    |||||||||||||||||||||||||||||| ||||||||||| | |||||| || |||||||||||  |||||||||    
T  25069358 tggtcgaaccactgagtcattggttgaaccgcatgactgaaccgtattaaatcggataactcggttgtatgactcgg 25069434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 29983235 - 29983335
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||| |||||| |||| ||||  |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  29983235 catagttttaaaactcggttcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 29983334  T
Q  162 a 162  Q
    |    
T  29983335 a 29983335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 1582155 - 1582265
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| || ||||| ||| ||||| | || || ||||||||||||  |||||||||| ||||||| |||||||||    
T  1582155 catagttttaaaactcggctcggtcatcgactcagcaggtgcactgggtcaatgagtcaatggtcgaaccgttgagtcattgattgaaccgcatgactga 1582254  T
Q  162 actggattaaa 172  Q
    |  ||||||||    
T  1582255 atcggattaaa 1582265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 14802063 - 14801974
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaacc 151  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | | ||| | ||||| ||||||||||||| |||||||||||| |||||    
T  14802063 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccattgagtcattggtcgaacc 14801974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 15249055 - 15248966
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaacc 151  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | | ||| | ||||| ||||||||||||| |||||||||||| |||||    
T  15249055 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccattgagtcattggtcgaacc 15248966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 47423453 - 47423545
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||  |||||||||| ||||        || ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  47423453 catagttttaaaactcggctcggttatcgattcggcggggg--------tactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 47423544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 16198811 - 16198683
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||| | |||| |||| || || ||||||| | |||||  ||| ||||||||||| |||| |||||||||| |||| ||||    
T  16198811 catagttttaaaactcggctcggccatcgactcggtagaggtattgggtcactgggtcgatg-tcgaaccactgggtcactggttgaaccgcatggctga 16198713  T
Q  162 actggattaaaccgtataactcggttagat 191  Q
    |  |||| ||| || || ||||||||||||    
T  16198712 aacggatcaaatcggatgactcggttagat 16198683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 198
Target Start/End: Complemental strand, 33628360 - 33628226
Alignment:
Q  64 tagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    ||||||||||| ||||||||| | | || |||||||||| | || || | ||||| |||||| |||||| || ||||||||| ||||| ||||||| |||    
T  33628360 tagttttaaaactcggctcggacattgactcggcaggggtactgagtcactgggtcaatggttgaaccattgggtcattggtcgaaccgcatgactaaac 33628261  T
Q  164 tggattaaaccgtataactcggttagatgactcgg 198  Q
     |||| ||  || || |||||||| ||| ||||||    
T  33628260 cggatcaactcggatgactcggttggataactcgg 33628226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 30801677 - 30801754
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtc 139  Q
    ||||||||||||| |||||||| || ||||||||| || || ||||||| ||||| | | |||| |||||||||||||    
T  30801677 catagttttaaaactcggctcgatcatcgattcgggagaggtattgggtcattggatcattggttgaaccactgagtc 30801754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 25830139 - 25830223
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    |||||||||||| |||||||||  ||| |||||||||||  |||||||||   ||||||||| ||||||||| || || ||||||    
T  25830139 tgggttaatggttgaaccactggttcactggttgaaccatttgactgaaccaaattaaaccggataactcggctatataactcgg 25830223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 46004212 - 46004153
Alignment:
Q  128 aaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggtta 188  Q
    ||||||||  |||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  46004212 aaccactggatcattggttgaactgcatgactgaaccggattaaaccg-ataactcggtta 46004153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 20623149 - 20623246
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgact 159  Q
    |||||||||||||  |||  ||||| |||| |||| | |||| | |||| | || || |||||||||| ||||| ||||||||||||||| |||||||    
T  20623149 catagttttaaaaaccggaccggtcatcgactcggtaagggcgtcgggtcactgagtcaatggtcgaatcactgggtcattggttgaaccgcatgact 20623246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 45498883 - 45498951
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactc 183  Q
    ||||| ||||||||||||| |||||||||| | |||||  ||||||||||  |||||||||| |||||||    
T  45498883 tgggtcaatggtcgaaccattgagtcattgatcgaaccgaatgactgaac-cgattaaaccggataactc 45498951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 28761775 - 28761636
Alignment:
Q  71 aaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggatta 170  Q
    |||||||||||||||| |||| |||||||||| | ||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||  ||||||    
T  28761775 aaaattcggctcggtcatcgactcggcaggggtactgggttattgggtcaatggtcgaaccactgagtcactggttgaaccgcatgactgaatcggatta 28761676  T
Q  171 aaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    ||||| ||||||||||||| |||||||| |||||||||||    
T  28761675 aaccggataactcggttaggtgactcggtcttaagattaa 28761636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 597234 - 597350
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||| ||| |||| |||| ||||||| ||| | |||| |||||||||||||||||||||||||| |||||||| | |||||||    
T  597234 catagttttaaaattcggctcagtcatcgactcggtaggggcactggatcattgagttaatggtcgaaccactgagtcatt-gttgaaccgcgtgactga 597332  T
Q  162 actggattaaaccgtata 179  Q
    || |||||||||||||||    
T  597333 accggattaaaccgtata 597350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 32493288 - 32493168
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||| ||| ||||||| | || |||||||||||||||||||  |||||||||||||| |||||||||    
T  32493288 catagttttaaaactcggctcggtcatcgactcggcatgggtattgggtcagtgagttaatggtcgaaccactggatcattggttgaaccgcatgactga 32493189  T
Q  162 actggattaaaccgtataact 182  Q
    || | ||||||||| ||||||    
T  32493188 accgaattaaaccgaataact 32493168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 36833904 - 36834039
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||||||| | ||||| ||||||| ||||||||||||||||| |||||| | ||||| |||||||||    
T  36833904 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggtcaatggtcgaaccactgaatcattgatcgaaccgcatgactga 36834003  T
Q  162 actggattaaaccgtataactcggttagatgactcg 197  Q
    || |||| ||  || || |||| ||||||| |||||    
T  36834004 accggatcaactcgaatgactcagttagataactcg 36834039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 42063462 - 42063563
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  42063462 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 42063561  T
Q  162 ac 163  Q
    ||    
T  42063562 ac 42063563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 19726816 - 19726716
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  19726816 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 19726717  T
Q  162 a 162  Q
    |    
T  19726716 a 19726716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 30360454 - 30360555
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||| ||||||||||| |||||||||| | || | ||||| | ||||| |||||||||||||||||||||||| | ||||| ||||||||    
T  30360454 acatagttttaaaactcggctcggtcatcgattcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattgttcgaaccgcatgactg 30360553  T
Q  161 aa 162  Q
    ||    
T  30360554 aa 30360555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 40485656 - 40485556
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| | || ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  40485656 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 40485557  T
Q  162 a 162  Q
    |    
T  40485556 a 40485556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 41726461 - 41726361
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| | || | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  41726461 catagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 41726362  T
Q  162 a 162  Q
    |    
T  41726361 a 41726361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 18656727 - 18656599
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||||||||        || ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  18656727 catagttttaaaactcggctcggtcatcgactcggcagggg--------tactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 18656636  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    || |||| ||  || || |||||||||||| ||||||    
T  18656635 accggatcaactcggatgactcggttagataactcgg 18656599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 13487252 - 13487153
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| |||| ||||| |||| | ||| | | ||| | |||||||||||||||||||||||||| ||||| |||||||||    
T  13487252 catagttttaaaattcggctcggtcatcgaatcggc-ggggtactggatcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 13487154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 8015024 - 8014901
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| | || ||||| |||| | | ||| | ||| | ||||||||||||| |||||||||||| ||||| ||| |||||    
T  8015024 catagttttaaaactcggctcggtcattgactcggcgggggtactaggtcactggatcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 8014925  T
Q  162 actggattaaaccgtataactcgg 185  Q
    |  ||||||||||| |||||||||    
T  8014924 atcggattaaaccggataactcgg 8014901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 3655857 - 3655954
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgact 159  Q
    ||||||||||||||||||||||||| |||| ||||| |||  | ||| | | ||| | |||||||||||||||||||||||||| ||||| |||||||    
T  3655857 catagttttaaaattcggctcggtcatcgactcggcggggatactggatcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgact 3655954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 31008638 - 31008538
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    |||||||||||||||||| |||||| |||| ||||| |||| | || || | ||||| ||||||||||||| |||||||||||| ||||| ||||| |||    
T  31008638 catagttttaaaattcggttcggtcatcgactcggcgggggtactgagtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgattga 31008539  T
Q  162 a 162  Q
    |    
T  31008538 a 31008538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 39375166 - 39375250
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||| ||  || || |||||||||||| ||||||    
T  39375166 tgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggatcaactcggatgactcggttagataactcgg 39375250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 198
Target Start/End: Complemental strand, 44056604 - 44056469
Alignment:
Q  63 atagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaa 162  Q
    |||||||||||| || ||||| || |||| |||||||||| | ||  | | ||||| |||||||||||||||||||||||||| |||||  |||||||||    
T  44056604 atagttttaaaactcagctcgatcatcgactcggcaggggtactgaatcactgggtcaatggtcgaaccactgagtcattggtcgaaccgtatgactgaa 44056505  T
Q  163 ctggattaaaccgtataactcggttagatgactcgg 198  Q
    | |||| ||  || || |||| ||||||| ||||||    
T  44056504 ccggatcaactcggatgactcagttagataactcgg 44056469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 6545714 - 6545807
Alignment:
Q  93 tcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggt 186  Q
    ||||| |||| | ||||| | ||||| |||||||||||||  ||||||||||| ||||| ||| ||||||| ||||||||||| ||||||||||    
T  6545714 tcggcgggggtactgggtcactgggtcaatggtcgaaccagcgagtcattggtcgaaccgcataactgaaccggattaaaccggataactcggt 6545807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 14910095 - 14910192
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgact 159  Q
    ||||||||||||| ||||||||||| |||| ||||| || | | ||| | | ||||| |||| ||||||||||||||||||||| ||||| |||||||    
T  14910095 catagttttaaaactcggctcggtcatcgactcggcgggagtactggatcaatgggtcaatgatcgaaccactgagtcattggtcgaaccgcatgact 14910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 4455398 - 4455322
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||| ||  || || |||| ||||||| ||||||    
T  4455398 tggtcgaaccactgagtcattggtcgaaccgcatgactgaaccggatcaactcggatgactcagttagataactcgg 4455322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 5970054 - 5970006
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaa 162  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  5970054 tgggtcaatggtcgaaccattgagtcattggttgaaccgcatgactgaa 5970006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 29867772 - 29867852
Alignment:
Q  106 tgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggt 186  Q
    ||||| ||||||| | |||| |||||| ||||||| |||||||||| ||||||||||| |||||||| || || |||||||    
T  29867772 tgggtcattgggtcattggttgaaccagtgagtcactggttgaaccgcatgactgaaccggattaaatcggatgactcggt 29867852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 36658559 - 36658607
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaa 162  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  36658559 tgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 36658607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 26403727 - 26403638
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaacc 151  Q
    |||| |||||||| |||||| |||| |||| |||  ||||| | || || |||| ||||||||| |||||||||||||| ||||||||||    
T  26403727 cataattttaaaactcggcttggtcatcgactcgataggggtactgtgtcattgagttaatggttgaaccactgagtcactggttgaacc 26403638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 20821847 - 20821791
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggatta 170  Q
    |||||||||||||||||||||||||||   |||||||| ||| ||||||| ||||||    
T  20821847 tgggttaatggtcgaaccactgagtcacctgttgaaccgcataactgaaccggatta 20821791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 45219571 - 45219507
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggt 186  Q
    ||||||||||| || |||| |||||||||| ||||||||||  ||||||||||| || |||||||    
T  45219571 tggtcgaaccattgggtcaatggttgaaccgcatgactgaatcggattaaaccggatgactcggt 45219507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 31893248 - 31893201
Alignment:
Q  123 ggtcgaaccactgagtcattggttgaaccacatgactgaactggatta 170  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||    
T  31893248 ggtcaaaccactgagtcactggttgaaccgcatgactgaaccggatta 31893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 16106818 - 16106670
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||| | | ||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  16106818 catagttttaaaactcggctcggtcatcgactcggcaagagtattgggtcactgggttaatggtcgaaccactgagtcactggttgaaccgcatgactga 16106719  T
Q  162 actggattaaaccgtataactcggttagatgactcg-gcttaagattaa 209  Q
    |  ||||||||||  |||||||||||||||||||||  |||||||||||    
T  16106718 atcggattaaaccagataactcggttagatgactcgatcttaagattaa 16106670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 195
Target Start/End: Complemental strand, 6065614 - 6065481
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||  ||||| ||||||||||||||| | || || | |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  6065614 catagttttaaaactcggtccggtcatcgattcggcaggggtactgagtcactgggttaatggtcgaaccactgggtcattggttgaaccgcatgactga 6065515  T
Q  162 actggattaaaccgtataactcggttagatgact 195  Q
    |   |||||||||| ||||||||||| |||||||    
T  6065514 atcagattaaaccgaataactcggtttgatgact 6065481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 35305399 - 35305263
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||||||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  35305399 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 35305300  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    || |||| ||  || || |||||||||||| ||||||    
T  35305299 accggatcaactcggatgactcggttagataactcgg 35305263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 21800786 - 21800638
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||| ||||| |  |||| | ||||| |||||||||| ||||| |||| |||||||||  |||||||||    
T  21800786 catagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaatcactgggtcactggttgaactgcatgactga 21800687  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    |  |||||||| || |||||||||||| ||||||||| |||||||||||    
T  21800686 atcggattaaatcggataactcggttaaatgactcggtcttaagattaa 21800638  T

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Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 37484403 - 37484539
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||||| ||||| |||| | ||  | ||||| ||||||||| || |||||||| ||||||| |||| ||||| |||||  ||    
T  37484403 catagttttaaaactcggctcggttgtcgactcggtaaggatactgggtcattgggttattgatcgaaccattgagtcactggtcgaaccgcatgatgga 37484502  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |||||||||||||| || |||||||||||||||||||    
T  37484503 actggattaaaccggatgactcggttagatgactcgg 37484539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 19881939 - 19882062
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| | || ||||| |||| | ||||| | | ||| ||||||||||||| |||||||||||| ||||| ||| |||||    
T  19881939 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcacttggtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 19882038  T
Q  162 actggattaaaccgtataactcgg 185  Q
    || ||||||||||| |||||||||    
T  19882039 accggattaaaccggataactcgg 19882062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 32878817 - 32878694
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||||||||||| ||||| |||| | |||||   ||||| ||||||||||||| |||||||||||| ||||| ||| |||||    
T  32878817 catagttttaaaactcggctcggtcgtcgactcggcgggggtactgggtccctgggtcaatggtcgaaccaatgagtcattggtcgaaccgcataactga 32878718  T
Q  162 actggattaaaccgtataactcgg 185  Q
    |  | ||||||||| |||||||||    
T  32878717 atcgaattaaaccggataactcgg 32878694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 10810661 - 10810536
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||| || |||| ||||||  || | ||||| | |||||||||| ||||||||||| ||||| ||||||||| |||||||||    
T  10810661 catagttttaaaactcggctcgatcatcgactcggcaacggtactgggtcaatgggttaatgatcgaaccactgggtcatcggttgaaccgcatgactga 10810562  T
Q  162 actggattaaaccgtataactcggtt 187  Q
    |   |||||||||| |||||||||||    
T  10810561 atcagattaaaccgaataactcggtt 10810536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 24128753 - 24128853
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | ||||| ||||||||||||||||| |||||||| ||||| |||||||||    
T  24128753 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactga 24128852  T
Q  162 a 162  Q
    |    
T  24128853 a 24128853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 3988705 - 3988811
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| | || |||||||||  | ||||| ||||||| |||||||||| || || ||||||||||||||| |||||||||    
T  3988705 catagttttaaaactcggctcggtcattgactcggcagggatactgggtcattgggtcaatggtcgaatcattgggtcattggttgaaccgcatgactga 3988804  T
Q  162 actggat 168  Q
    || ||||    
T  3988805 accggat 3988811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 17513020 - 17513117
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgact 159  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||  |||||||    
T  17513020 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaactgcatgact 17513117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 16457851 - 16457751
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| ||||||||||| ||| ||||||| | || ||||||||| |||||||||| ||| |||||||| | ||| |||||    
T  16457851 catagttttaaaactcggctcggtcatcgattcggcatgggtattgggtcaatgagttaatggtggaaccactgaatcactggttgaatcgcataactga 16457752  T
Q  162 a 162  Q
    |    
T  16457751 a 16457751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 23293289 - 23293189
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| | || |||||  ||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  23293289 catagttttaaaactcggctcggtcattgactcggcgagggtactgggtcaatgggtgaatggtcgaaccactgagtcattggtcgaaccgcatgactga 23293190  T
Q  162 a 162  Q
    |    
T  23293189 a 23293189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 39062024 - 39061932
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| |||| ||||| ||||        |||||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  39062024 catagttttaaaattcggctcggtcatcgactcggcggggg--------tattgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 39061933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 31900414 - 31900505
Alignment:
Q  63 atagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaa 162  Q
    |||||||||||||||||||||||| |||||||||| ||||        || ||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  31900414 atagttttaaaattcggctcggtcatcgattcggcggggg--------tactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 31900505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 12365636 - 12365511
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||  |||||||||||||||   ||| | ||||| | ||| ||| |||||||||||||| |||| |||||||||| |||||||||    
T  12365636 catagttttaaaactcggaccggtcgtcgattcggttagggtactgggtcactggtttattggtcgaaccactgggtcactggttgaaccgcatgactga 12365537  T
Q  162 actggattaaaccgtataactcggtt 187  Q
    || ||  ||||||| || ||||||||    
T  12365536 accgggataaaccggatgactcggtt 12365511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 7153437 - 7153536
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||| | |||| | ||||| | ||  |||||||||||||||||||||||||||| ||||| |||||||||    
T  7153437 catagttttaaaactcggctcggtcatcgactcgacgggggtactgggtcaatga-ttaatggtcgaaccactgagtcattggtcgaaccgcatgactga 7153535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 37315037 - 37314945
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||||||||| ||||        || ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  37315037 catagttttaaaactcggctcggtcatcgattcggcggggg--------tactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 37314946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 39761963 - 39761825
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    ||||||||||||||||||| |||||| | ||||||  ||  | ||| ||| |||||| ||||||||||||||||||||||||||| |||   ||| ||      
T  39761963 acatagttttaaaattcggttcggtcattgattcgatagacgtattaggtcattgggataatggtcgaaccactgagtcattggtcgaaatgcattacaa 39761864  T
Q  161 aactggattaaaccgtataactcggttagatgactcggc 199  Q
    || ||||| ||  || ||||||||||||||| |||||||    
T  39761863 aattggatcaattcggataactcggttagataactcggc 39761825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 39678303 - 39678404
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    ||||||||||||||||||  || ||| |||| ||||||| || | ||||| | || || |||||||||| ||||||||||||||| ||||| ||||||||    
T  39678303 acatagttttaaaattcgattctgtcatcgactcggcagaggtactgggtcaatgagtcaatggtcgaatcactgagtcattggtcgaaccgcatgactg 39678402  T
Q  161 aa 162  Q
    ||    
T  39678403 aa 39678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 26606583 - 26606663
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgac 194  Q
    |||||||| |||||||||||||||| | |||||||||  ||||||||||    ||||||||| ||||||||||||||||||    
T  26606583 tgggttaacggtcgaaccactgagttaatggttgaactgcatgactgaatcaaattaaaccgaataactcggttagatgac 26606663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 27905622 - 27905758
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    |||||||||||||  ||||| || | |||| |||| || |||||||||| | |||||  ||||||||||||||| ||||| |||||||||  ||||||||    
T  27905622 catagttttaaaacacggcttggccatcgactcggtagaggcattgggtcactgggtagatggtcgaaccactgggtcatcggttgaaccgtatgactga 27905721  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |   ||| ||| || || |||||||||||| ||||||    
T  27905722 atcagatcaaatcggatgactcggttagataactcgg 27905758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 23250969 - 23251092
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| || |||| ||| |||| ||| | |||| | ||||| | ||| | |||||||||||||  ||||||||||| ||||| ||| |||||    
T  23250969 catagttttaaaactcagctcagtcatcgactcgacgggggtactgggtcactggatcaatggtcgaaccagcgagtcattggtcgaaccgcataactga 23251068  T
Q  162 actggattaaaccgtataactcgg 185  Q
    |  ||||||||||| |||||||||    
T  23251069 atcggattaaaccggataactcgg 23251092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 29523986 - 29523894
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| ||||        || ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  29523986 catagttttaaaactcggctcggtcatcgactcggcggggg--------tactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 29523895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 29781415 - 29781538
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||| ||||||||||| |||| ||||||| | |||||| | |||| ||  ||||||||| ||  | |||| |||||||||| |||| |||    
T  29781415 acatagttttaaaactcggctcggtcttcgactcggcagagacattggataattgagtcgatggtcgaatcatcgggtcactggttgaaccgcatggctg 29781514  T
Q  161 aactggattaaaccgtataactcg 184  Q
    ||  ||||||||||| || |||||    
T  29781515 aatcggattaaaccggatgactcg 29781538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 14885340 - 14885392
Alignment:
Q  111 tattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    |||||||| ||||||||||||||||||||||| || ||||| |||||||||||    
T  14885340 tattgggtcaatggtcgaaccactgagtcattagtcgaaccgcatgactgaac 14885392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 18540658 - 18540753
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatga 157  Q
    ||||||||||||| |||||||| || |||| |||| ||||| | ||| | ||||||| | ||||||||||||||||||   ||| |||||||||||    
T  18540658 catagttttaaaactcggctcgatcatcgactcggaaggggtactggatcattgggtcactggtcgaaccactgagtcgcaggtcgaaccacatga 18540753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 20907126 - 20907196
Alignment:
Q  117 gttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggtt 187  Q
    |||| ||||||||||| |||||||||||| ||||| |||||||| |||||| |||| || || ||||||||    
T  20907126 gttactggtcgaaccattgagtcattggtagaaccgcatgactggactggaataaatcggatgactcggtt 20907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 22315294 - 22315188
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||| ||||||| | || |||||||| | | | ||| |  | || ||||||||||||||| ||||| |||||||||||||||| |||    
T  22315294 catagttttaaaactcgtctcggtcattgactcggcaggtgtactaggtcaccgagtcaatggtcgaaccactcagtcactggttgaaccacatgattga 22315195  T
Q  162 actggat 168  Q
    || ||||    
T  22315194 accggat 22315188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 24934893 - 24934963
Alignment:
Q  117 gttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggtt 187  Q
    |||| |||| |||||||||  |||||||||||||| ||| ||||||||| |||||| || |||||||||||    
T  24934893 gttattggttgaaccactggatcattggttgaaccgcataactgaactgtattaaatcggataactcggtt 24934963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 25683585 - 25683655
Alignment:
Q  117 gttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggtt 187  Q
    |||| |||| |||||||||  |||||||||||||| ||| ||||||||| |||||| || |||||||||||    
T  25683585 gttattggttgaaccactggatcattggttgaaccgcataactgaactgtattaaatcggataactcggtt 25683655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 29743785 - 29743743
Alignment:
Q  17 attacaatgttctttgcttgtttttgcacttctgaattgaata 59  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  29743785 attacaatgttctttgcttgtttttccacgtctgaattgaata 29743743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 37256088 - 37255988
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    |||||||||||||  ||| |||||| |||| |||| || |||| ||| | | ||| | ||||||||||||| |||||| ||||||||||| ||||| |||    
T  37256088 catagttttaaaaaccggttcggtcatcgactcggtagaggcactggatcaatggttcaatggtcgaaccattgagtcgttggttgaaccgcatgattga 37255989  T
Q  162 a 162  Q
    |    
T  37255988 a 37255988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 40404311 - 40404447
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||| |||||| |||| |||| | ||  | || || ||||| ||| ||||||||||||||  ||| |||| ||||| |||||| ||    
T  40404311 catagttttaaaaatcggatcggtcatcgactcggtaaggttagtgagtcattggattattggtcgaaccactggatcactggtcgaaccgcatgacaga 40404410  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |  ||||| || || ||||||||| || || ||||||    
T  40404411 atcggattgaatcggataactcggatatatcactcgg 40404447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 43869988 - 43869924
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggt 186  Q
    ||||||||||| || |||| |||||||||| ||||||||||  ||| ||||||| || |||||||    
T  43869988 tggtcgaaccattgggtcactggttgaaccgcatgactgaatcggactaaaccggatgactcggt 43869924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 19916534 - 19916387
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| ||||  | |||| || | ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||||||    
T  19916534 catagttttaaaactcggctcggtcatcgacacagcagaggtactgggtcattggattaatggtcgaaccactgaatcgttggttgaaccgcatgactga 19916435  T
Q  162 actggattaaaccgtataactcggttagatgactcggcttaagattaa 209  Q
    |||| ||||||| | |||||||||||||||||||||||||| ||||||    
T  19916434 actgaattaaactgaataactcggttagatgactcggcttaggattaa 19916387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 4414415 - 4414563
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||||||| | ||||| | ||||| ||||||||||||||||||||| | |||||||| |||||||||    
T  4414415 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactgagtcacttgttgaaccgcatgactga 4414514  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    |  ||||||||||| |||||||| ||| ||||||||| |||||||||||    
T  4414515 atcggattaaaccggataactcgattaaatgactcggtcttaagattaa 4414563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 8132788 - 8132927
Alignment:
Q  59 atacatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgac 158  Q
    |||||||||||||||| ||||||||||| |||| |||| || || | ||||| | || ||||||||| ||||||||||||||||||||||||| ||||||    
T  8132788 atacatagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcattggttgaaccgcatgac 8132887  T
Q  159 tgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    ||||| ||||||||||| ||||||||| ||| ||||||||    
T  8132888 tgaaccggattaaaccggataactcggctagttgactcgg 8132927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 25232774 - 25232638
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||||||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  25232774 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 25232675  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    || |||| ||  || ||  ||||||||||| ||||||    
T  25232674 accggatcaactcggatggctcggttagataactcgg 25232638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 6355073 - 6354926
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||  || ||   || || | ||||||||||||||||||| ||||||| | |||||||| |||||||||    
T  6355073 catagttttaaaactcggctcggtcatcgactcgatagaggttctgagtcactgggttaatggtcgaaccattgagtcaatagttgaaccgcatgactga 6354974  T
Q  162 actggattaaaccgtataactcggttagatgactc-ggcttaagatta 208  Q
    || ||||||||||| ||||| |||||||||||||| | ||||||||||    
T  6354973 accggattaaaccgaataacccggttagatgactcagccttaagatta 6354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 1936610 - 1936474
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    |||||||||||||  || ||||||| |||| |||||||||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  1936610 catagttttaaaacccgactcggtcatcgactcggcaggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 1936511  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    || |||| ||  || ||  ||||||||||| ||||||    
T  1936510 accggatcaactcggatggctcggttagataactcgg 1936474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 23611640 - 23611540
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||| |||||| |||| ||||| |||  | ||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  23611640 catagttttaaaactcggttcggtcatcgactcggcggggatactgggttaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 23611541  T
Q  162 a 162  Q
    |    
T  23611540 a 23611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 43245819 - 43245683
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||| |||||   |||| ||| |||||| ||||||| | ||||||||||||||||||| ||||| | |||||||||| ||| |||||    
T  43245819 catagttttaaaattcgactcggctatcgactcgacaggggtattgggtcactgggttaatggtcgaaccattgagttactggttgaaccgcataactga 43245720  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    || |||| ||| |  |||||||||| | |||||||||    
T  43245719 accggatcaaatcaaataactcggtcatatgactcgg 43245683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 54822047 - 54822175
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||||||| | | ||||| | || || |||| |||||||||||||||| |||||||||| |||||||||    
T  54822047 catagttttaaaactcggctcggtcatcgactcggcaggtgtactgggtcactgagtcaatgatcgaaccactgagtcactggttgaaccgcatgactga 54822146  T
Q  162 actggattaaaccgtataactcggttaga 190  Q
    |   ||||||| || ||||||||| ||||    
T  54822147 aacagattaaatcggataactcgggtaga 54822175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 7362176 - 7362267
Alignment:
Q  118 ttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcggcttaagattaa 209  Q
    ||||||||||||||||| | |||||||||||||| ||||| |||||| |||||||||| |||||||| |||||||| ||| | |||||||||    
T  7362176 ttaatggtcgaaccactaaatcattggttgaaccgcatgattgaactagattaaaccgaataactcgattagatgattcgacataagattaa 7362267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 11792384 - 11792484
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||  | ||||| | ||||| ||||||||||||||||| |||||||| ||||| |||||||||    
T  11792384 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactga 11792483  T
Q  162 a 162  Q
    |    
T  11792484 a 11792484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 24394072 - 24394196
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    ||||| |||||||| ||||||||||| |||| ||||| |||| | ||||| | ||||| ||||||||||||| ||||| |||||| ||| ||||| ||||    
T  24394072 acataattttaaaactcggctcggtcatcgactcggcgggggtactgggtcactgggtcaatggtcgaaccagtgagttattggtcgaatcacataactg 24394171  T
Q  161 aactggattaaaccgtataactcgg 185  Q
    |||  ||||||| || |||||||||    
T  24394172 aaccagattaaatcggataactcgg 24394196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 55675420 - 55675556
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||| |||||| | ||||| | | ||| |||||||||| ||||||||||||||| ||||| || |||| |    
T  55675420 catagttttaaaactcggctcggtcatcgactcgacaggggtactgggtcaataggtcaatggtcgaatcactgagtcattggtcgaaccgcaagactaa 55675519  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    || |||||||  || ||  ||||||||||| ||||||    
T  55675520 accggattaactcgaatggctcggttagataactcgg 55675556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 198
Target Start/End: Complemental strand, 12704760 - 12704623
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||| ||||||||||| |||| | |||| ||| | ||||| | |  || |||||||||||||||||||||||| | ||||| ||| ||||    
T  12704760 acatagttttaaaactcggctcggtcatcgactaggcatgggtactgggtcactaagtcaatggtcgaaccactgagtcattgatcgaaccgcattactg 12704661  T
Q  161 aactggattaaaccgtataactcggttagatgactcgg 198  Q
    ||| |||| ||  || || |||||||||||| ||||||    
T  12704660 aaccggatcaactcggatgactcggttagataactcgg 12704623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 26203780 - 26203644
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| |||||||| || |||| ||| ||| |||| ||||| | || ||  ||||||||||||  ||||||||||||||||  |||||||||    
T  26203780 catagttttaaaactcggctcgatcatcgactcgacagaggcactgggtcactgagtggatggtcgaaccatcgagtcattggttgaactgcatgactga 26203681  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |  ||||||||||| || ||||| ||| || ||||||    
T  26203680 atcggattaaaccggatgactcgattaaataactcgg 26203644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 24776274 - 24776140
Alignment:
Q  57 atatacatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatg 156  Q
    |||| ||||||||||||| ||||||||| | |||| |||| || || ||||||| | |||||  |||||||||||||||  |||||||||||||  ||||    
T  24776274 atatgcatagttttaaaactcggctcggccatcgactcggtagaggtattgggtcactgggtcgatggtcgaaccactggatcattggttgaactgcatg 24776175  T
Q  157 actgaactggattaaaccgtataactcggttagat 191  Q
     |||||  |||| ||| || || ||||||||||||    
T  24776174 gctgaatcggatcaaatcggatgactcggttagat 24776140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 28359783 - 28359678
Alignment:
Q  57 atatacatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatg 156  Q
    |||| ||||||||||||| ||||||||||| | || ||||||| || ||||||| | ||||| |||| |||||||| ||  |||||| ||||||| ||||    
T  28359783 atattcatagttttaaaactcggctcggtcattgactcggcagaggtattgggtcactgggtcaatgatcgaaccattggatcattgattgaaccgcatg 28359684  T
Q  157 actgaa 162  Q
    ||||||    
T  28359683 actgaa 28359678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 2039143 - 2039211
Alignment:
Q  123 ggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagat 191  Q
    |||||||||||||||||| |||||||||| ||| ||||||| |||||||| || || || |||||||||    
T  2039143 ggtcgaaccactgagtcactggttgaacctcattactgaaccggattaaatcggatgacccggttagat 2039211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 38519329 - 38519397
Alignment:
Q  104 attgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaa 172  Q
    ||||||| | ||||||||||||||||||| ||||||| |||||||||| ||||||| |||  |||||||    
T  38519329 attgggtcactgggttaatggtcgaaccattgagtcactggttgaaccgcatgacttaaccagattaaa 38519397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 18707525 - 18707455
Alignment:
Q  127 gaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcg 197  Q
    ||||||||| ||||||||||||||| || |||||||  ||||| ||||| || ||||||||| ||||||||    
T  18707525 gaaccactgtgtcattggttgaaccgcacgactgaatcggattgaaccgaatgactcggttatatgactcg 18707455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 44352086 - 44352216
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||| |||| |||||| |||| ||||||  || | ||||| | || ||  |||||||||||| || |||| |||||||||| ||||||||    
T  44352086 acatagttttaaaactcggttcggtcatcgactcggcataggtactgggtcactgagtcgatggtcgaaccattgggtcactggttgaaccgcatgactg 44352185  T
Q  161 aactggattaaaccgtataactcggttagat 191  Q
    ||   ||| |||||| || ||||||| ||||    
T  44352186 aatcagatcaaaccggatgactcggtaagat 44352216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 7648075 - 7648123
Alignment:
Q  115 gggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    |||| ||||||||||||| |||||||||||| ||||| |||||||||||    
T  7648075 gggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactgaac 7648123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 55497505 - 55497553
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaa 162  Q
    ||||| |||||||||||||||||||||||| | ||||| ||||||||||    
T  55497505 tgggtcaatggtcgaaccactgagtcattgatcgaaccgcatgactgaa 55497553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 38465218 - 38465304
Alignment:
Q  112 attgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    ||||||| | |||| ||| ||||||||||||||| ||||| |||||||||| | |||| || || ||  |||||||| |||||||||    
T  38465218 attgggtcattggttgaatcactgagtcattggtcgaaccgcatgactgaattagattgaatcgaatggctcggttatatgactcgg 38465304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 13428830 - 13428781
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    ||||||||||||||||||||||||||| |  ||||||| ||| |||||||    
T  13428830 tgggttaatggtcgaaccactgagtcactaattgaaccgcataactgaac 13428781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 293593 - 293529
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggt 186  Q
    ||||||||||| || |||| |||||||||| ||||||||||  ||| ||||||| || |||||||    
T  293593 tggtcgaaccattgggtcactggttgaaccgcatgactgaatcggactaaaccggatgactcggt 293529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 2859415 - 2859507
Alignment:
Q  58 tatacatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaac 150  Q
    ||||||||||||||||| || |  ||||  |||| |||| | ||| ||||||| | ||||| |||||||||||||||| |||| |||| ||||    
T  2859415 tatacatagttttaaaactcagaccggtgatcgactcggtaagggtattgggtcactgggtcaatggtcgaaccactgggtcactggtcgaac 2859507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 25510487 - 25510623
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||  |||||||||| |||| | |||   ||||| | ||| | | |||| ||||||||| ||||||||||||||| ||  |||||    
T  25510487 catagttttaaaactcggaccggtcgtcgactcggtaagggtgctgggtcactggttcattggttgaaccactgggtcattggttgaaccgcacaactga 25510586  T
Q  162 actggattaaaccgtataactcggttagatgactcgg 198  Q
    |  ||||| ||||| || ||||| | | |||||||||    
T  25510587 atcggattgaaccggatgactcgatcatatgactcgg 25510623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 34856004 - 34856104
Alignment:
Q  59 atacatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgac 158  Q
    ||||||||||||||||  |||  | ||| |||| |||| | |||| | |||| | || || ||||||||||||||||  |||||||||||||| ||||||    
T  34856004 atacatagttttaaaaaccggaccagtcatcgactcggtaagggcgtcgggtcactgagtcaatggtcgaaccactggatcattggttgaaccgcatgac 34856103  T
Q  159 t 159  Q
    |    
T  34856104 t 34856104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 6817290 - 6817425
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| |||| | ||| | ||||| ||||||||||||||||||||||||||||| |||||||||| ||| ||| |    
T  6817290 catagttttaaaactcggctcggtcatcgactcggtaagggtactgggtcattgggttaatggtcgaaccactgagtcactggttgaaccgcataactaa 6817389  T
Q  162 actggattaaaccgtataactcggttagatgactcg 197  Q
    |  ||||||||||| |||| |||| |||||||||||    
T  6817390 atcggattaaaccgaataattcggctagatgactcg 6817425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 23595691 - 23595823
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||  |||| |||||||||| | ||||| | |||||| ||||||||||||||||||||||||||||||| ||||| | |    
T  23595691 catagttttaaaactcggctcggtgatcgactcggcaggggtactgggtcactgggttgatggtcgaaccactgagtcattggttgaaccgcatgattaa 23595790  T
Q  162 actggattaaaccgtataactcggttagatgac 194  Q
    |  ||||||||||  ||||||||| ||||||||    
T  23595791 atcggattaaaccaaataactcggctagatgac 23595823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 24068300 - 24068200
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| ||||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  24068300 catagttttaaaactcggctcggtcatcgactcggcgggggtattgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 24068201  T
Q  162 a 162  Q
    |    
T  24068200 a 24068200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 29419863 - 29419724
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||||||||        || ||||| ||||||| ||||||||||||| |||||||||| |||||||||    
T  29419863 catagttttaaaactcggctcggtcatcgactcggcagggg--------tactgggtcaatggtcaaaccactgagtcactggttgaaccgcatgactga 29419772  T
Q  162 actggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    |  |||||||| || ||||||||||||| |||||||| |||||||||||    
T  29419771 atcggattaaa-cggataactcggttaggtgactcggtcttaagattaa 29419724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 30269593 - 30269693
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | || ||||||||||||||||||||||| ||||| ||||| |||||||||    
T  30269593 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagttaatggtcgaaccactgagtcgttggtcgaaccgcatgactga 30269692  T
Q  162 a 162  Q
    |    
T  30269693 a 30269693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 196
Target Start/End: Original strand, 30426317 - 30426452
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||||||||||||||| |||| ||||   ||| | ||| | | |  |||||||||||||||||| ||||| |||||||||| ||||| ||    
T  30426317 acatagttttaaaattcggctcggtcatcgactcggacagggtactggatcaataagttaatggtcgaaccactaagtcactggttgaaccgcatgattg 30426416  T
Q  161 aactggattaaaccgtataactcggttagatgactc 196  Q
    ||   |||||||||  ||||||||| ||||||||||    
T  30426417 aatcagattaaaccaaataactcggatagatgactc 30426452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 8464281 - 8464382
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||||||||||||||| ||   |||||||  | | ||||| | || |||||||||||||||||| | |||||||| ||||| |||||||||    
T  8464281 catagttttaaaattcggctcggtcatcagctcggcagatgtactgggtcactgagttaatggtcgaaccactaaatcattggtcgaaccgcatgactga 8464380  T
Q  162 ac 163  Q
    ||    
T  8464381 ac 8464382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 21289551 - 21289651
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||| | | ||||||||||| |||| ||||| |||| | ||||| | ||||| ||||||||||||| |||||||||||| ||||| |||||||||    
T  21289551 catagttttcatactcggctcggtcatcgactcggc-ggggtactgggtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactga 21289649  T
Q  162 ac 163  Q
    ||    
T  21289650 ac 21289651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 35166125 - 35166055
Alignment:
Q  117 gttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggtt 187  Q
    |||| |||| |||||||||  |||||||||||||| ||| ||||||||| |||||| || |||||||||||    
T  35166125 gttattggttgaaccactggatcattggttgaaccgcataactgaactgtattaaatcggataactcggtt 35166055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 22351303 - 22351258
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgact 159  Q
    ||||| |||||||||||||||||||||||||| ||||| |||||||    
T  22351303 tgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgact 22351258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 34779981 - 34779909
Alignment:
Q  114 tgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggt 186  Q
    ||||| ||||||||||||| |||||| ||| | ||||| ||| | ||||| ||||||||||| ||||||||||    
T  34779981 tgggtcaatggtcgaaccagtgagtcgttgatcgaaccgcataattgaaccggattaaaccggataactcggt 34779909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 19763468 - 19763413
Alignment:
Q  131 cactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggt 186  Q
    |||||| |||||||||||||| |||||  |||||||||||||||| || |||||||    
T  19763468 cactgaatcattggttgaaccgcatgatagaactggattaaaccggatgactcggt 19763413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 31513474 - 31513370
Alignment:
Q  64 tagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    ||||||||||| ||||||||| | | || |||| ||||| | || || | ||||| |||||| |||||| || ||||||||| ||||| ||||||| |||    
T  31513474 tagttttaaaactcggctcggacattgactcggaaggggtactgagtcaatgggtcaatggttgaaccattgggtcattggtcgaaccgcatgactaaac 31513375  T
Q  164 tggat 168  Q
     ||||    
T  31513374 cggat 31513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 207
Target Start/End: Original strand, 7839 - 7974
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||||  || | || || |||||||||||||||||||||||||||| ||||||||||| ||||||||     
T  7839 catagttttaaaactcggctcggtcatcgactcggcaaaggtactgagtcattgggttaatggtcgaaccactgagtcgttggttgaaccgcatgactg- 7937  T
Q  162 actggattaaaccgtataactcggttagatgactcggcttaagatt 207  Q
             ||||| |||||||||||||||||||||||||||||||    
T  7938 ---------aaccggataactcggttagatgactcggcttaagatt 7974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 11136 - 11039
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgact 159  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||    
T  11136 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgact 11039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 12721 - 12821
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||| ||||||| |||| ||||| |||| | ||||| | ||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  12721 catagttttaaaactcgactcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 12820  T
Q  162 a 162  Q
    |    
T  12821 a 12821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 17924 - 17854
Alignment:
Q  93 tcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactgaac 163  Q
    |||||||||| | || || ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  17924 tcggcaggggtactgagtcattgggttaatggtcgaaccattgagtcattggttgaaccgcatgactgaac 17854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 51909 - 52010
Alignment:
Q  62 catagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactga 161  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| | ||||| | || || |||||||||||||| |||||||||||  |||| |||||||||    
T  51909 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccacagagtcattggtcaaaccgcatgactga 52008  T
Q  162 ac 163  Q
    ||    
T  52009 ac 52010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 7916 - 7840
Alignment:
Q  122 tggtcgaaccactgagtcattggttgaaccacatgactgaactggattaaaccgtataactcggttagatgactcgg 198  Q
    |||||||||||||||||||||||||||| | ||||||||||| | |||||| || |||||||||||  |||||||||    
T  7916 tggtcgaaccactgagtcattggttgaatcgcatgactgaaccgtattaaatcggataactcggttgtatgactcgg 7840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 5031 - 4883
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||| ||||||||||| |||| |||| ||||   |||||| | | ||||||||||||||||||||||||  |||| || || | ||||||    
T  5031 acatagttttaaaactcggctcggtcatcgactcggtagggtg-ttgggtcactcggttaatggtcgaaccactgagtcgctggtcgagccgcttgactg 4933  T
Q  161 aactggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    ||   |||||||||  ||||||| |||||||||  ||| |||||||||||    
T  4932 aatcagattaaaccaaataactcagttagatgatccggtcttaagattaa 4883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 5051 - 4903
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||| ||||||||||| |||| |||| ||||   |||||| | | ||||||||||||||||||||||||  |||| || || | ||||||    
T  5051 acatagttttaaaactcggctcggtcatcgactcggtagggtg-ttgggtcactcggttaatggtcgaaccactgagtcgctggtcgagccgcttgactg 4953  T
Q  161 aactggattaaaccgtataactcggttagatgactcgg-cttaagattaa 209  Q
    ||   |||||||||  ||||||| |||||||||  ||| |||||||||||    
T  4952 aatcagattaaaccaaataactcagttagatgatccggtcttaagattaa 4903  T

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Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 64344 - 64467
Alignment:
Q  61 acatagttttaaaattcggctcggtcgtcgattcggcaggggcattgggttattgggttaatggtcgaaccactgagtcattggttgaaccacatgactg 160  Q
    |||||||||||||| ||||||||||| |||| ||| ||  || | ||||| | || ||  |||||||||||| || |||| |||||||||| ||||||||    
T  64344 acatagttttaaaactcggctcggtcatcgactcgacataggtactgggtcactgagtcgatggtcgaaccattgggtcactggttgaaccgcatgactg 64443  T
Q  161 aactggattaaaccgtataactcg 184  Q
    ||  |||| |||||| || |||||    
T  64444 aatcggatcaaaccggatgactcg 64467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 147480 - 147436
Alignment:
Q  15 tcattacaatgttctttgcttgtttttgcacttctgaattgaata 59  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||    
T  147480 tcattacaatgttctttgcttgtttttctacttccgaattgaata 147436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 29551 - 29507
Alignment:
Q  131 cactgagtcattggttgaaccacatgactgaactggattaaaccg 175  Q
    |||||||||||||||  |||| ||| |||||||||||||||||||    
T  29551 cactgagtcattggtcaaaccgcatcactgaactggattaaaccg 29507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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