View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6543_high_1 (Length: 473)

Name: NF6543_high_1
Description: NF6543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6543_high_1
NF6543_high_1
[»] chr3 (38 HSPs)
chr3 (11-457)||(30321545-30321984)
chr3 (243-342)||(17752062-17752162)
chr3 (243-342)||(19053382-19053482)
chr3 (241-342)||(3645355-3645457)
chr3 (264-342)||(40240508-40240587)
chr3 (241-342)||(29614246-29614348)
chr3 (241-326)||(42956126-42956212)
chr3 (163-341)||(34707645-34707816)
chr3 (161-342)||(32901079-32901253)
chr3 (164-335)||(40581014-40581179)
chr3 (264-342)||(20685861-20685940)
chr3 (139-217)||(33946591-33946669)
chr3 (241-342)||(43079865-43079967)
chr3 (252-328)||(1516043-1516120)
chr3 (164-332)||(3845839-3845999)
chr3 (143-242)||(25341245-25341344)
chr3 (241-334)||(20894555-20894649)
chr3 (275-328)||(27769736-27769790)
chr3 (241-342)||(37243519-37243621)
chr3 (191-342)||(43971778-43971922)
chr3 (300-342)||(46573385-46573427)
chr3 (163-216)||(21296749-21296802)
chr3 (266-342)||(33946481-33946558)
chr3 (268-335)||(20174878-20174946)
chr3 (163-342)||(22809124-22809297)
chr3 (271-342)||(38524171-38524243)
chr3 (270-333)||(51345543-51345607)
chr3 (161-216)||(27769627-27769681)
chr3 (264-334)||(29830578-29830649)
chr3 (264-342)||(52895336-52895415)
chr3 (264-342)||(53217972-53218050)
chr3 (266-342)||(53261698-53261776)
chr3 (300-342)||(4974424-4974466)
chr3 (309-342)||(3876194-3876227)
chr3 (264-335)||(21720983-21721055)
chr3 (302-342)||(33946600-33946640)
chr3 (264-319)||(37778209-37778265)
chr3 (264-342)||(48597797-48597877)
[»] chr5 (56 HSPs)
chr5 (145-334)||(2878616-2878797)
chr5 (264-342)||(1943071-1943150)
chr5 (188-335)||(35536850-35536992)
chr5 (265-334)||(27805992-27806062)
chr5 (241-342)||(28625533-28625635)
chr5 (241-329)||(28357194-28357283)
chr5 (264-335)||(5559857-5559929)
chr5 (267-334)||(24030293-24030361)
chr5 (265-335)||(13625458-13625529)
chr5 (139-208)||(29657957-29658026)
chr5 (243-342)||(41059720-41059820)
chr5 (264-342)||(40697082-40697161)
chr5 (269-342)||(29659141-29659215)
chr5 (173-242)||(7565294-7565363)
chr5 (264-328)||(43268581-43268646)
chr5 (264-335)||(39154699-39154771)
chr5 (241-328)||(41419554-41419642)
chr5 (141-216)||(22573614-22573689)
chr5 (245-342)||(9477393-9477491)
chr5 (267-335)||(10537164-10537234)
chr5 (266-335)||(15709830-15709900)
chr5 (264-329)||(17657318-17657384)
chr5 (241-342)||(29418683-29418785)
chr5 (138-208)||(32964460-32964530)
chr5 (268-333)||(42852101-42852167)
chr5 (241-329)||(13060546-13060635)
chr5 (163-216)||(17128261-17128314)
chr5 (272-332)||(35083323-35083384)
chr5 (274-342)||(40452408-40452477)
chr5 (268-335)||(29922127-29922195)
chr5 (302-342)||(42558648-42558688)
chr5 (264-342)||(11912033-11912112)
chr5 (163-335)||(12467247-12467416)
chr5 (268-342)||(20458489-20458564)
chr5 (264-342)||(26003073-26003152)
chr5 (264-334)||(29136765-29136836)
chr5 (300-342)||(342255-342297)
chr5 (241-342)||(4728898-4728999)
chr5 (302-340)||(6125401-6125439)
chr5 (244-342)||(38461211-38461312)
chr5 (268-340)||(780501-780574)
chr5 (163-216)||(1473339-1473392)
chr5 (274-342)||(2577359-2577428)
chr5 (298-335)||(3520445-3520482)
chr5 (264-328)||(7364254-7364319)
chr5 (171-216)||(11991296-11991341)
chr5 (163-208)||(13739344-13739389)
chr5 (286-342)||(17868135-17868192)
chr5 (163-216)||(22201986-22202039)
chr5 (147-200)||(43010722-43010775)
chr5 (265-320)||(11163235-11163291)
chr5 (264-342)||(22201862-22201942)
chr5 (241-328)||(28357405-28357493)
chr5 (280-335)||(41125766-41125822)
chr5 (156-216)||(42808959-42809019)
chr5 (267-342)||(43265863-43265939)
[»] chr2 (42 HSPs)
chr2 (161-342)||(21788438-21788612)
chr2 (265-342)||(8832534-8832612)
chr2 (163-342)||(4026909-4027080)
chr2 (264-342)||(38216095-38216174)
chr2 (171-334)||(7480838-7480997)
chr2 (163-342)||(33321243-33321415)
chr2 (140-342)||(37409603-37409798)
chr2 (264-335)||(42839259-42839331)
chr2 (268-342)||(4533402-4533477)
chr2 (268-342)||(22898288-22898363)
chr2 (264-342)||(30382200-30382279)
chr2 (165-242)||(34913417-34913491)
chr2 (241-335)||(36501453-36501548)
chr2 (264-342)||(25836644-25836722)
chr2 (241-342)||(32521977-32522079)
chr2 (138-207)||(1768728-1768797)
chr2 (163-216)||(27703508-27703561)
chr2 (264-335)||(887488-887560)
chr2 (264-335)||(4004895-4004967)
chr2 (140-328)||(5516036-5516217)
chr2 (265-328)||(23956209-23956273)
chr2 (137-215)||(9140780-9140858)
chr2 (138-204)||(23956314-23956380)
chr2 (256-328)||(31165098-31165170)
chr2 (165-217)||(27709717-27709769)
chr2 (268-335)||(29774825-29774893)
chr2 (264-342)||(446503-446582)
chr2 (300-335)||(5903651-5903686)
chr2 (264-334)||(11777060-11777131)
chr2 (264-342)||(19683648-19683727)
chr2 (300-342)||(755642-755684)
chr2 (301-335)||(5903729-5903763)
chr2 (265-326)||(29133614-29133676)
chr2 (264-342)||(39592325-39592402)
chr2 (243-335)||(736019-736112)
chr2 (163-216)||(755792-755845)
chr2 (190-227)||(30995942-30995979)
chr2 (241-293)||(12223905-12223957)
chr2 (264-300)||(12267073-12267109)
chr2 (241-336)||(32366202-32366298)
chr2 (188-227)||(37419925-37419965)
chr2 (264-335)||(45163823-45163895)
[»] chr1 (56 HSPs)
chr1 (165-342)||(9572715-9572886)
chr1 (163-342)||(391151-391331)
chr1 (241-342)||(37329343-37329445)
chr1 (267-340)||(35897552-35897626)
chr1 (241-342)||(48819352-48819454)
chr1 (162-340)||(10849999-10850175)
chr1 (268-342)||(10365250-10365325)
chr1 (264-342)||(28690080-28690159)
chr1 (241-342)||(17628356-17628458)
chr1 (265-342)||(22593338-22593416)
chr1 (241-342)||(26988201-26988303)
chr1 (241-342)||(32497203-32497305)
chr1 (241-342)||(41196641-41196743)
chr1 (264-334)||(46500939-46501011)
chr1 (283-342)||(47413467-47413527)
chr1 (264-342)||(15515278-15515357)
chr1 (264-342)||(15791459-15791538)
chr1 (264-342)||(37712143-37712222)
chr1 (264-342)||(42591458-42591537)
chr1 (241-333)||(3069794-3069887)
chr1 (241-333)||(14460981-14461074)
chr1 (241-325)||(16888914-16888999)
chr1 (241-332)||(6337697-6337789)
chr1 (241-328)||(36259236-36259324)
chr1 (264-342)||(8410209-8410288)
chr1 (268-342)||(17814270-17814345)
chr1 (264-342)||(19395850-19395929)
chr1 (286-342)||(20169252-20169310)
chr1 (264-342)||(41130070-41130149)
chr1 (148-333)||(20169232-20169410)
chr1 (264-335)||(4068191-4068263)
chr1 (241-340)||(22103163-22103262)
chr1 (271-342)||(28870286-28870358)
chr1 (188-242)||(36423008-36423059)
chr1 (171-296)||(49971242-49971360)
chr1 (264-342)||(3115993-3116072)
chr1 (268-342)||(5347234-5347309)
chr1 (188-340)||(13038955-13039100)
chr1 (241-335)||(31249735-31249830)
chr1 (161-216)||(46473075-46473130)
chr1 (264-334)||(50919563-50919634)
chr1 (241-335)||(13412392-13412486)
chr1 (241-342)||(26435106-26435208)
chr1 (242-342)||(15235092-15235193)
chr1 (188-217)||(31378800-31378829)
chr1 (264-328)||(35282539-35282604)
chr1 (241-325)||(38781131-38781216)
chr1 (309-342)||(42367072-42367105)
chr1 (264-335)||(8061947-8062019)
chr1 (265-340)||(12828201-12828277)
chr1 (302-342)||(19220288-19220328)
chr1 (241-328)||(25485801-25485889)
chr1 (265-342)||(31378681-31378760)
chr1 (171-225)||(35897667-35897718)
chr1 (264-331)||(41576337-41576405)
chr1 (302-342)||(42363713-42363753)
[»] chr4 (63 HSPs)
chr4 (163-340)||(29877622-29877792)
chr4 (188-342)||(36740912-36741059)
chr4 (241-340)||(897023-897123)
chr4 (175-342)||(12495575-12495737)
chr4 (264-341)||(36254968-36255046)
chr4 (241-342)||(48591355-48591457)
chr4 (241-329)||(9319101-9319190)
chr4 (163-342)||(23297421-23297590)
chr4 (165-342)||(41228888-41229058)
chr4 (264-342)||(34526268-34526347)
chr4 (265-334)||(488323-488393)
chr4 (241-342)||(17222882-17222984)
chr4 (241-342)||(18630826-18630928)
chr4 (241-342)||(42617161-42617263)
chr4 (148-334)||(27368091-27368270)
chr4 (163-216)||(29996689-29996742)
chr4 (265-333)||(48687011-48687080)
chr4 (163-340)||(18424211-18424380)
chr4 (264-335)||(28074440-28074512)
chr4 (243-342)||(41071405-41071505)
chr4 (268-334)||(9153521-9153588)
chr4 (240-329)||(825734-825824)
chr4 (241-342)||(4603263-4603365)
chr4 (268-333)||(7148852-7148918)
chr4 (269-342)||(8130560-8130634)
chr4 (241-342)||(22273833-22273935)
chr4 (265-342)||(42153093-42153171)
chr4 (264-328)||(8601277-8601342)
chr4 (242-342)||(35405738-35405838)
chr4 (287-342)||(3564305-3564361)
chr4 (264-335)||(11256599-11256671)
chr4 (165-342)||(46704201-46704370)
chr4 (268-342)||(15179897-15179972)
chr4 (241-300)||(15184599-15184658)
chr4 (265-335)||(19414192-19414263)
chr4 (264-334)||(38345761-38345832)
chr4 (268-334)||(43699388-43699455)
chr4 (241-342)||(23335695-23335797)
chr4 (241-342)||(46175910-46176012)
chr4 (268-328)||(34633470-34633531)
chr4 (288-335)||(48667770-48667818)
chr4 (165-242)||(212975-213048)
chr4 (240-342)||(2547978-2548081)
chr4 (268-342)||(2702646-2702721)
chr4 (264-342)||(11298658-11298737)
chr4 (264-334)||(11679066-11679137)
chr4 (264-334)||(11687345-11687416)
chr4 (299-342)||(12495701-12495744)
chr4 (299-342)||(23297426-23297469)
chr4 (241-342)||(30956736-30956839)
chr4 (265-335)||(31022477-31022548)
chr4 (264-342)||(39931475-39931554)
chr4 (264-342)||(47202901-47202980)
chr4 (171-342)||(42611799-42611963)
chr4 (163-230)||(3564203-3564267)
chr4 (268-328)||(10046312-10046373)
chr4 (264-328)||(22303171-22303236)
chr4 (300-341)||(38876054-38876095)
chr4 (287-342)||(7206509-7206565)
chr4 (144-216)||(7206636-7206708)
chr4 (284-333)||(9201648-9201699)
chr4 (271-342)||(22117436-22117508)
chr4 (310-342)||(38515651-38515683)
[»] chr8 (46 HSPs)
chr8 (264-341)||(32212947-32213025)
chr8 (264-335)||(25333639-25333711)
chr8 (264-342)||(35055498-35055576)
chr8 (241-342)||(37410844-37410946)
chr8 (188-342)||(41145327-41145476)
chr8 (171-333)||(16972296-16972452)
chr8 (264-335)||(25465785-25465857)
chr8 (264-342)||(32131516-32131595)
chr8 (241-342)||(12607132-12607234)
chr8 (138-208)||(16706001-16706071)
chr8 (266-335)||(24087249-24087319)
chr8 (264-335)||(25671828-25671898)
chr8 (264-342)||(9131059-9131138)
chr8 (264-342)||(10213771-10213850)
chr8 (264-342)||(32975763-32975842)
chr8 (264-342)||(34286495-34286574)
chr8 (264-334)||(34338322-34338393)
chr8 (171-342)||(19925548-19925712)
chr8 (241-342)||(42102159-42102261)
chr8 (241-334)||(42363256-42363350)
chr8 (171-230)||(13131421-13131477)
chr8 (264-342)||(11988272-11988351)
chr8 (264-342)||(24350450-24350529)
chr8 (288-342)||(28879155-28879210)
chr8 (142-216)||(34102736-34102811)
chr8 (241-335)||(38338789-38338884)
chr8 (241-342)||(24866882-24866984)
chr8 (269-341)||(30974070-30974143)
chr8 (161-230)||(19327848-19327914)
chr8 (161-342)||(32924142-32924317)
chr8 (264-342)||(38895735-38895814)
chr8 (241-342)||(10298858-10298959)
chr8 (300-342)||(13131556-13131598)
chr8 (147-342)||(16706031-16706219)
chr8 (139-217)||(26047005-26047083)
chr8 (286-333)||(29243103-29243152)
chr8 (286-333)||(42363356-42363405)
chr8 (264-328)||(9130962-9131027)
chr8 (265-325)||(16926676-16926737)
chr8 (163-212)||(24087122-24087171)
chr8 (269-333)||(31079106-31079171)
chr8 (163-208)||(32131423-32131468)
chr8 (274-342)||(34545552-34545621)
chr8 (268-328)||(36907589-36907650)
chr8 (267-335)||(42667076-42667145)
chr8 (264-335)||(29218189-29218261)
[»] chr7 (42 HSPs)
chr7 (163-342)||(38372541-38372713)
chr7 (165-342)||(44613404-44613574)
chr7 (138-299)||(23119895-23120048)
chr7 (241-342)||(32848583-32848686)
chr7 (175-334)||(34922926-34923080)
chr7 (161-300)||(48021622-48021752)
chr7 (264-342)||(23137094-23137173)
chr7 (241-335)||(29378698-29378793)
chr7 (241-342)||(16958868-16958970)
chr7 (241-342)||(20888627-20888729)
chr7 (241-342)||(22032815-22032917)
chr7 (264-335)||(25908370-25908442)
chr7 (264-342)||(16932861-16932940)
chr7 (264-342)||(16938244-16938323)
chr7 (264-342)||(33288006-33288085)
chr7 (269-342)||(33204915-33204989)
chr7 (136-206)||(39802980-39803050)
chr7 (269-342)||(43818809-43818883)
chr7 (241-342)||(47654345-47654447)
chr7 (241-333)||(14675900-14675993)
chr7 (243-342)||(39279484-39279585)
chr7 (264-342)||(991575-991654)
chr7 (264-342)||(14691230-14691309)
chr7 (244-342)||(22575642-22575741)
chr7 (264-342)||(29390482-29390561)
chr7 (264-330)||(46744029-46744096)
chr7 (138-230)||(12473164-12473253)
chr7 (242-342)||(1312167-1312268)
chr7 (300-340)||(26331878-26331918)
chr7 (264-331)||(30181626-30181694)
chr7 (267-342)||(35246748-35246824)
chr7 (264-342)||(16012774-16012853)
chr7 (241-335)||(19913998-19914093)
chr7 (163-242)||(21249139-21249215)
chr7 (213-242)||(22319318-22319347)
chr7 (138-219)||(25907737-25907818)
chr7 (290-334)||(28004685-28004730)
chr7 (301-342)||(43635206-43635247)
chr7 (268-340)||(44834916-44834989)
chr7 (241-328)||(12473406-12473494)
chr7 (188-216)||(17944535-17944563)
chr7 (302-342)||(37465817-37465857)
[»] scaffold0157 (2 HSPs)
scaffold0157 (175-342)||(24740-24902)
scaffold0157 (299-342)||(24733-24776)
[»] chr6 (39 HSPs)
chr6 (272-334)||(12817047-12817110)
chr6 (241-342)||(32165192-32165294)
chr6 (161-342)||(23239228-23239402)
chr6 (264-342)||(6752888-6752967)
chr6 (264-342)||(8014864-8014943)
chr6 (264-342)||(9202330-9202409)
chr6 (264-342)||(32675820-32675899)
chr6 (241-329)||(10874037-10874126)
chr6 (165-335)||(29623416-29623578)
chr6 (265-340)||(9764324-9764400)
chr6 (165-335)||(6758612-6758776)
chr6 (264-333)||(6958700-6958770)
chr6 (165-335)||(2040119-2040287)
chr6 (283-342)||(35071359-35071419)
chr6 (264-342)||(6776884-6776963)
chr6 (268-342)||(9201652-9201727)
chr6 (266-328)||(10054457-10054520)
chr6 (268-342)||(8010976-8011050)
chr6 (241-342)||(10184261-10184363)
chr6 (270-335)||(10755221-10755287)
chr6 (150-230)||(30533950-30534027)
chr6 (242-342)||(2027107-2027208)
chr6 (266-333)||(10687388-10687456)
chr6 (268-342)||(12816832-12816908)
chr6 (136-179)||(10054351-10054394)
chr6 (264-342)||(32615346-32615425)
chr6 (300-342)||(2034160-2034202)
chr6 (288-333)||(3210929-3210975)
chr6 (269-342)||(9894856-9894930)
chr6 (163-225)||(10687290-10687352)
chr6 (300-334)||(21025158-21025192)
chr6 (264-333)||(22708362-22708432)
chr6 (244-342)||(29052389-29052487)
chr6 (264-340)||(1189459-1189536)
chr6 (139-208)||(22816487-22816556)
chr6 (287-328)||(2034270-2034313)
chr6 (264-300)||(15054559-15054595)
chr6 (284-335)||(20776450-20776502)
chr6 (264-342)||(34223455-34223535)
[»] scaffold0332 (2 HSPs)
scaffold0332 (190-326)||(14693-14822)
scaffold0332 (140-205)||(14650-14714)
[»] scaffold0048 (2 HSPs)
scaffold0048 (145-334)||(58807-58989)
scaffold0048 (264-342)||(59343-59422)
[»] scaffold1367 (2 HSPs)
scaffold1367 (264-342)||(1134-1213)
scaffold1367 (171-233)||(1049-1108)
[»] scaffold0512 (1 HSPs)
scaffold0512 (268-342)||(4144-4219)
[»] scaffold0057 (1 HSPs)
scaffold0057 (262-342)||(24320-24401)
[»] scaffold0100 (1 HSPs)
scaffold0100 (264-341)||(38385-38463)
[»] scaffold0015 (1 HSPs)
scaffold0015 (288-333)||(48568-48614)
[»] scaffold1130 (1 HSPs)
scaffold1130 (258-334)||(2321-2398)
[»] scaffold0299 (1 HSPs)
scaffold0299 (171-215)||(11351-11395)
[»] scaffold0291 (1 HSPs)
scaffold0291 (264-335)||(19631-19703)
[»] scaffold0191 (1 HSPs)
scaffold0191 (145-206)||(31245-31308)


Alignment Details
Target: chr3 (Bit Score: 354; Significance: 0; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 11 - 457
Target Start/End: Complemental strand, 30321984 - 30321545
Alignment:
Q  11 cataggtgtttatgtcggtaaataagctcaaagaagttcatccaaacactaaagaaattgaatatcacaaaatctaagagtattggcaataagctaactt 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30321984 cataggtgtttatgtcagtaaataagctcaaagaagttcatccaaacactaaagaaattgaatatcccaaaatctaagagtattggcaataagctaactt 30321885  T
Q  111 aagagtatgtgcagtaaataagctcatttagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatat 210  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30321884 aagagtatgtgcagtaaataagctcattta-ggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaacaaataagcttttatat 30321786  T
Q  211 attattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattacataaaggct 310  Q
    |||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  30321785 att-------ataagtttgttaacatagtttagtttatgataaatcagttcacgaagatacaattttcattggtgaaaacttataaattaaataaaggct 30321693  T
Q  311 tatttatttgcataagctatttttcttaagctnnnnnnntaagccaatctaaacttttcatcagtgtcatttacagttcaaac--acacgcagaattaag 408  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  30321692 tatttatttgcataagctatttttcttaagct-aaaaaataagccaatctaaacttttcatcagtgtcatttacagttcaaacatacacgcagaattaag 30321594  T
Q  409 ctcgatcaacaacataacagcgcgatcaacaacataacagcaaagaaat 457  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30321593 ctcgatcaacaacataacagcgcgatcaacaacataacagcgaagaaat 30321545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 17752162 - 17752062
Alignment:
Q  243 gtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagc 341  Q
    |||||||| | ||||||| | ||||||||||||||| ||||| | |||||||||||| ||||||| | |||||||||| ||||||||||||||| |||||    
T  17752162 gtttatgaaagatcagtttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagc 17752063  T
Q  342 t 342  Q
    |    
T  17752062 t 17752062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 19053482 - 19053382
Alignment:
Q  243 gtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagc 341  Q
    |||||||| | ||||||| | ||||||||||||||| ||||| | |||||||||||| ||||||| | |||||||||| ||||||||||||||| |||||    
T  19053482 gtttatgaaagatcagtttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagc 19053383  T
Q  342 t 342  Q
    |    
T  19053382 t 19053382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 3645355 - 3645457
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||||||| ||||||||||||||| ||||||| | |||||||||| | ||| |  ||||||||||| ||||||||||||||| |||    
T  3645355 tagtttatgaaaaaacagttcatgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataagctatttttcataa 3645454  T
Q  340 gct 342  Q
    |||    
T  3645455 gct 3645457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 40240587 - 40240508
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| | ||||| |||||  ||||| |||||||||||||||||||||||||||| ||||||    
T  40240587 gaagatacaattttcgttagtgagagcttatgaattaagataaaagcttatttatttgcataagctatttttcataagct 40240508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 29614246 - 29614348
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||||| | ||||||||||||||| ||||||| | |||||||||| | ||| |  ||||||||||| ||||||||||||||| |||    
T  29614246 tagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataagctatttttcataa 29614345  T
Q  340 gct 342  Q
    |||    
T  29614346 gct 29614348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 42956212 - 42956126
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataag 326  Q
    |||||||||||||| ||| | |  |||||||||||||| ||||||| |||||||||||| |||||||  ||||||||||||||||||    
T  42956212 tagtttatgataaaacagcttataaagatacaattttcgttagtgagaacttataaattaacataaaaacttatttatttgcataag 42956126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 341
Target Start/End: Complemental strand, 34707816 - 34707645
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttca 262  Q
    ||||||| ||||||||||||| ||  | ||||| |||||||||||| |||||||   |||||| |||||||  |||||||     ||| ||| ||| | |    
T  34707816 ttttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattatt---cataagcttgttaaggtagttta-----tgaaaaaacagctaa 34707725  T
Q  263 cgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagc 341  Q
    |||||||||||||||| |||| || ||||||  |||| |||||||  ||||||||||||| |||| |||||||| |||||    
T  34707724 cgaagatacaattttcgttagcgagaacttacgaattaacataaaaacttatttatttgcttaagttatttttcataagc 34707645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 342
Target Start/End: Complemental strand, 32901253 - 32901079
Alignment:
Q  161 tattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagtt 260  Q
    |||||| ||| |||||||||||| || || ||||||||||||||||||   |||||||||| || |||||||| |     |||||||| | ||| ||  |    
T  32901253 tattttaagtatatgcaaaacaacttatgtaaataaataagcttttat---ttattattcacaaatttgttaaga-----tagtttataagaaaacaact 32901162  T
Q  261 cacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     | ||||||| ||||||| ||||||| ||||||||  || | |||||  | ||||||||||||||||||||||||| ||||||    
T  32901161 tatgaagataaaattttcgttagtgagaacttatattttaatataaaaacatatttatttgcataagctatttttcataagct 32901079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 335
Target Start/End: Complemental strand, 40581179 - 40581014
Alignment:
Q  164 tttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcac 263  Q
    |||||| ||||||||||||| || ||||||||||||||||||||| ||||||||   ||||| |||| ||  |||||||  | |  | ||| |||   |     
T  40581179 tttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattatta---ataagcttgtcaaggtagttta--tga--aaaaaacagcgtat 40581087  T
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||| ||||||||| ||||||| ||||||| |||| |||||||  |||||||||||||||||| ||||||||    
T  40581086 gaagaaacaattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcataagatatttttc 40581014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 20685861 - 20685940
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||  |||||||||||| |||||| ||||||| ||||||    
T  20685861 gaagatacaattttcattagtgagaacttgtgaattatcataaaaacttatttatttggataagcaatttttcataagct 20685940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 33946669 - 33946591
Alignment:
Q  139 tagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatta 217  Q
    ||||||||||||||||   || ||||||||| |||||||||| |  || ||||||||||||||||||||| ||||||||    
T  33946669 tagggcccgtttggattgagcttattttgagcttatgcaaaatagcttatgcaaataaataagcttttatttattatta 33946591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 43079967 - 43079865
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||||||||||| | | ||| ||||||| ||||| | |||| ||||||||||||| |||||||||||||| |||    
T  43079967 tagtttatgaaaaaacagcttatgaagatacaattttcgtgattgagaacttatgaattaacttaaaagcttatttatttgaataagctatttttcataa 43079868  T
Q  340 gct 342  Q
    |||    
T  43079867 gct 43079865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 328
Target Start/End: Complemental strand, 1516120 - 1516043
Alignment:
Q  252 aaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    ||||||||| |  |||||||||||||||||||||| |||||||||||| | |||||  ||||||||||| ||||||||    
T  1516120 aaatcagtttataaagatacaattttcattagtgagaacttataaattaaaataaaaacttatttatttacataagct 1516043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 332
Target Start/End: Original strand, 3845839 - 3845999
Alignment:
Q  164 tttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcac 263  Q
    |||||| |||||||| ||| |||   |||||||||||||||||||||||||||   |||||| |||| ||  |||||||     ||| ||| |||   |     
T  3845839 tttgagcttatgcaacacagattacacaaataaataagcttttatatattatt---cataagcttgtcaagctagttta-----tgacaaaacagcatat 3845930  T
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattt 332  Q
    ||||||||| |||||  |||||||||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  3845931 gaagataca-ttttcgctagtgaaaacatatgaattaacataaaagcttatttatttgcataagctattt 3845999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 25341245 - 25341344
Alignment:
Q  143 gcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagttta 242  Q
    ||||||||||||   || ||||||||| ||||| ||||||   | |||||||||||||||||| || |||||||| ||||||| |||||||  |||||||    
T  25341245 gcccgtttggattgagcgtattttgagcttatgtaaaacagcatatgcaaataaataagctttcatttattattactcataagcttgttaaggtagttta 25341344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 20894555 - 20894649
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctattttt 334  Q
    |||||| ||| ||| ||||||| ||||||||||||||| ||||||| | |||||||||| | ||| |  ||||||||||| ||||| ||||||||    
T  20894555 tagtttttgaaaaaacagttcatgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataaactattttt 20894649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 27769736 - 27769790
Alignment:
Q  275 tttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagct 328  Q
    |||| ||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  27769736 tttcgttaatgaaaacttataaattaacataaaagcttatttatttgcataagct 27769790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 37243519 - 37243621
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| |||  |||| | |||| |||| |||||||| |||| ||||||| |||||  ||||| ||||| ||||||||||||||| |||||| |||    
T  37243519 tagtttatgaaaaaatagtttatgaaggtacacttttcattggtgagaacttatgaattaagataaaagcttacttatttgcataagctctttttcataa 37243618  T
Q  340 gct 342  Q
    |||    
T  37243619 gct 37243621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 342
Target Start/End: Complemental strand, 43971922 - 43971778
Alignment:
Q  191 aaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagatacaattttcattagtgaaaac 290  Q
    ||||||||||||||||||   |||||||||| ||||||||||| |     |||||||||| ||| || || | ||||||| ||||||| ||||||| |||    
T  43971922 aaataaataagcttttat---ttattattcacaagtttgttaaaa-----tagtttatgagaaaacaatttatgaagataaaattttcgttagtgagaac 43971831  T
Q  291 ttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||  || |  ||||  | |||||||||||||||| |||||||| ||||||    
T  43971830 ttatattttaatttaaaaacatatttatttgcataagttatttttcataagct 43971778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 46573427 - 46573385
Alignment:
Q  300 acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| |||||||||||||||||||||||||||| ||||||    
T  46573427 acataaaagcttatttatttgcataagctatttttcctaagct 46573385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 21296749 - 21296802
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    ||||||| ||||||||||||| || |||||||||||||| |||||| |||||||    
T  21296749 ttttgagattatgcaaaacaatttatgcaaataaataagtttttatctattatt 21296802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 33946558 - 33946481
Alignment:
Q  266 agatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||| ||||||| ||| ||| ||||||| |||||  ||||| ||| |||||||||||||||||||||||| ||||||    
T  33946558 agataaaattttcgttaatgagaacttatgaattaatataaaagctcatttatttgcataagctatttttcataagct 33946481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 20174946 - 20174878
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||| ||||| | | ||||| ||||| |||||| ||||||||||||||||||||| ||||||    
T  20174946 atacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttc 20174878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 342
Target Start/End: Complemental strand, 22809297 - 22809124
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttca 262  Q
    ||||||| ||||||||||||  || ||||||||||||||||||| |||| ||||||||||||| |||| ||       |||||||||| ||| | | | |    
T  22809297 ttttgaggttatgcaaaacagcttatgcaaataaataagctttt-tata-tattattcataagcttgtcaa-----ggtagtttatgaaaaaactgctta 22809205  T
Q  263 cgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     ||||||||||||||| |||   | ||||||| |||| |||||||  |||||||||||||| ||||| | |||| ||||||    
T  22809204 tgaagatacaattttcgttaagaagaacttatgaattaacataaaaacttatttatttgcacaagctttatttcataagct 22809124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 342
Target Start/End: Original strand, 38524171 - 38524243
Alignment:
Q  271 caattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||| ||||| | | ||||| ||||| |||||| ||||||||||||||||||||| |||||| ||||||    
T  38524171 caattttcgttagtaagatcttatgaattaacataaaagcttatttatttgcataagctctttttcataagct 38524243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 51345543 - 51345607
Alignment:
Q  270 acaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttt 333  Q
    ||||||||||||| |||||| ||||||||| | ||||| | |||||||||||||||| |||||||    
T  51345543 acaattttcattaatgaaaagttataaattaatataaaagtttatttatttgcataaactatttt 51345607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 27769627 - 27769681
Alignment:
Q  161 tattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    ||||||||||||||||||||||| || ||||||||||| | ||||| |||||||||    
T  27769627 tattttgagtttatgcaaaacaacttatgcaaataaatgaactttt-tatattatt 27769681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 29830649 - 29830578
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||||||| ||||||| |||||||||||| | |||||  ||||||||||| || ||| |||||||    
T  29830649 gaagatacaattttcgttagtgagaacttataaattaaaataaaaacttatttatttacacaagttattttt 29830578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 52895415 - 52895336
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||| |||||||||| ||||||| || |||| ||||| |||||| |||||||||||||| ||| | ||||||| ||||||    
T  52895415 gaagttacaattttcgttagtgagaatttatgaattaacataaaagcttatttatttgcctaaacaatttttcataagct 52895336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 53218050 - 53217972
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| |||||||||||| | ||||| |||||||| | |||||| | |||||||| ||||||    
T  53218050 gaagatacaattttcgttagtgagaacttataaattaaaataaaagcttattt-tctgcataggatatttttcataagct 53217972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 53261776 - 53261698
Alignment:
Q  266 agatacaattttcattagtgaaaacttataaattac--ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||| |||| | ||||| ||||||| |||||   ||||| ||||||||| |||||||||||||||||| ||||||    
T  53261776 agatacaactttcgtcagtgagaacttatgaattaacaataaaagcttatttaattgcataagctatttttcataagct 53261698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 4974424 - 4974466
Alignment:
Q  300 acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||    
T  4974424 acataaaagcttatttatttgcataagctctttttcataagct 4974466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 3876227 - 3876194
Alignment:
Q  309 cttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||||||||||||||| ||||||    
T  3876227 cttatttatttgcataagctatttttcataagct 3876194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 21720983 - 21721055
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||||| ||||||| ||||||| | || |||||||   ||| || |||||||||||||||||||    
T  21720983 gaagatacaattttcgttagtgagaacttatgacttaacataaaaaattacttttttgcataagctatttttc 21721055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 33946600 - 33946640
Alignment:
Q  302 ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||| |||||||||||||||||||||||||| | ||||||    
T  33946600 ataaaagcttatttatttgcataagctattttgcataagct 33946640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 37778209 - 37778265
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttattt 319  Q
    ||||||||||||||  ||||||| |||||||||||| | ||||| ||||||||||||    
T  37778209 gaagatacaatttttgttagtgagaacttataaattaaaataaaagcttatttattt 37778265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 48597877 - 48597797
Alignment:
Q  264 gaagatacaattttcattagtgaaaactta-taaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| | ||||| |||||| | ||||| |||||| ||||||||||||||| |  ||||||||| ||||||    
T  48597877 gaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttatttgcaaacactatttttcgtaagct 48597797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 145 - 334
Target Start/End: Complemental strand, 2878797 - 2878616
Alignment:
Q  145 ccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagt 244  Q
    |||||||||| |||| ||||||||| |||||| |||||  || ||||||||||||||||||||| |||||||   ||||||||||| ||     | | ||    
T  2878797 ccgtttggattaggcttattttgagcttatgctaaacagcttatgcaaataaataagcttttatctattatt---cataagtttgtcaa-----tgtggt 2878706  T
Q  245 ttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    |||||| | | ||||| | ||||||||||||||  ||||||||||||| ||||||| |||||| |||||||||||| ||||||||||||||    
T  2878705 ttatgaaacaacagttta-gaagatacaatttttgttagtgaaaacttttaaattaacataaaagcttatttatttacataagctattttt 2878616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 1943071 - 1943150
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||| ||||||| ||||||    
T  1943071 gaagatacaattttcattagtgagaacttatgaattagcataaaagcttatttatttgcataagccatttttcgtaagct 1943150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 188 - 335
Target Start/End: Original strand, 35536850 - 35536992
Alignment:
Q  188 tgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagatacaattttcattagtgaa 287  Q
    |||||||| |||||||||||| | |||||  ||||||| |||| || ||||||||     ||| ||| ||| | | ||||||||||||||| ||| |||     
T  35536850 tgcaaatacataagcttttatgtgttattcatcataagcttgtcaagatagttta-----tgaaaaaacagcttatgaagatacaattttcgttactgag 35536944  T
Q  288 aacttataaattacataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  35536945 aacttatgaataatataaaagcttatttatttgcataagctatttttc 35536992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 27805992 - 27806062
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctattttt 334  Q
    |||||||||||||  |||||||||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  27805992 aagatacaatttttgttagtgaaaacttataaattaacataaaagtttatttatttgcataagctattttt 27806062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 28625533 - 28625635
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||||||||||| ||||||| ||| ||| ||||| |||||| ||||||||||||||||||| |||||||| |||    
T  28625533 tagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacctatgaattaacataaaagcttatttatttgcataagttatttttcataa 28625632  T
Q  340 gct 342  Q
    |||    
T  28625633 gct 28625635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 28357194 - 28357283
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagcta 329  Q
    |||||||||| ||| ||| | | ||||||||||||||| |||  ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  28357194 tagtttatgaaaaaacaggttatgaagatacaattttcgttaacgaaaacttataaattaacataaaagcttatttatttgcataagcta 28357283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 5559929 - 5559857
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||||| ||||||| || |||| |||| ||||||| ||||||||||||||||||||||||||||    
T  5559929 gaagatacaattttcgttagtgagaatttatgaatttacataaaagcttatttatttgcataagctatttttc 5559857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 24030293 - 24030361
Alignment:
Q  267 gatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    |||||||||||| ||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  24030293 gatacaattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcataagctattttt 24030361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 13625529 - 13625458
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    |||||| ||||||| |||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||    
T  13625529 aagataaaattttcgttagtgaaaacttataaattaatataaaagtttatttatttgcataagctatttttc 13625458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 29657957 - 29658026
Alignment:
Q  139 tagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttat 208  Q
    ||||| |||||||||| |||| ||||||||| ||||||||||||| || |||||| ||||||||||||||    
T  29657957 tagggaccgtttggattaggcttattttgagcttatgcaaaacaacttatgcaaaaaaataagcttttat 29658026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 41059820 - 41059720
Alignment:
Q  243 gtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagc 341  Q
    |||||||| ||||||  | | |||||| |||||||| ||||||| ||||||| ||||| |||||| |||||||||||||||||| || |||||| |||||    
T  41059820 gtttatgaaaaatcaccttatgaagattcaattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcataaactgtttttcataagc 41059721  T
Q  342 t 342  Q
    |    
T  41059720 t 41059720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 40697082 - 40697161
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||  ||  ||||||||||| ||||| |||||| ||||||||||||| |||||||||||||| ||||||    
T  40697082 gaagatacaatttttgttcctgaaaacttatgaattaacataaaagcttatttatttgtataagctatttttcataagct 40697161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 29659141 - 29659215
Alignment:
Q  269 tacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||||||| ||||||| |||||  |||||  |||||||||||||||||||| |||||| ||||||    
T  29659141 tacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataagctctttttcataagct 29659215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 7565363 - 7565294
Alignment:
Q  173 atgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagttta 242  Q
    ||||||||||| |  |||||||||||| |||||||| |||||||||| ||||| |||||||| |||||||    
T  7565363 atgcaaaacaactgatgcaaataaatatgcttttatgtattattatttataagcttgttaacgtagttta 7565294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 43268646 - 43268581
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    ||||||||||||||  ||||||| |||||||||||| ||||||| |||||||||||| ||||||||    
T  43268646 gaagatacaatttttgttagtgagaacttataaattaacataaaagcttatttattttcataagct 43268581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 39154771 - 39154699
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    |||||| ||||||| |||| ||| ||||||| ||||| || ||| ||||||||||||||||||||||||||||    
T  39154771 gaagatgcaatttttattattgagaacttatgaattaacacaaaagcttatttatttgcataagctatttttc 39154699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 41419554 - 41419642
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    |||||||||| ||| ||| | | ||||||||||||||| ||||||| ||||||| |||| |||||||  ||||||||||| ||||||||    
T  41419554 tagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacttatcaattaacataaaaacttatttattttcataagct 41419642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 22573614 - 22573689
Alignment:
Q  141 gggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    |||| |||||||| ||||| ||||||||| ||||||||||||| || ||||||||||| || |||| | |||||||    
T  22573614 gggctcgtttggacaaggcgtattttgagcttatgcaaaacaacttatgcaaataaatgagtttttttgtattatt 22573689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 342
Target Start/End: Original strand, 9477393 - 9477491
Alignment:
Q  245 ttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||| ||| ||||||| |||| |||||||||| ||| ||| ||||||| |||||  |||||  ||||||||||||||||| || |||||| ||||||    
T  9477393 ttatgaaaaaacagttcatgaaggtacaattttcgttactgagaacttatgaattaagataaaaacttatttatttgcataaactctttttcataagct 9477491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 10537234 - 10537164
Alignment:
Q  267 gatacaattttcattagtgaaaacttataaatta-cataaag-gcttatttatttgcataagctatttttc 335  Q
    |||||||||||| ||||||| ||||||| ||||| ||||||  |||||| |||||||||||||||||||||    
T  10537234 gatacaattttcgttagtgagaacttatgaattaacataaaaagcttatatatttgcataagctatttttc 10537164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 15709900 - 15709830
Alignment:
Q  266 agatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||||||||| ||| |||||||||| | ||||| ||| ||||||||  ||||||||||||||    
T  15709900 agatacaattttcattagtaaaagcttataaattaaaataaaagctcatttatttaaataagctatttttc 15709830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 17657318 - 17657384
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagcta 329  Q
    |||||||| |||||| ||||||| ||||||| ||||| |||||| | ||||||||||||||||||||    
T  17657318 gaagatacgattttcgttagtgagaacttatgaattaacataaaaggttatttatttgcataagcta 17657384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 29418785 - 29418683
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| || || | |||| |||||||||| ||||||| || ||||||||||  |||||  ||||||||||||||||| || |||||| |||    
T  29418785 tagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaatttataaattaagataaaaacttatttatttgcataaactttttttcataa 29418686  T
Q  340 gct 342  Q
    |||    
T  29418685 gct 29418683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 32964530 - 32964460
Alignment:
Q  138 ttagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttat 208  Q
    ||||||||||||||||  |||| | ||||||| |||||||||||||  | | |||||||||||||||||||    
T  32964530 ttagggcccgtttggaataggcttgttttgagcttatgcaaaacaacgtattcaaataaataagcttttat 32964460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 42852101 - 42852167
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttt 333  Q
    ||||||||||| ||||||| ||||||| ||||| |||||| ||||||||| ||||||||||| ||||    
T  42852101 atacaattttcgttagtgagaacttatgaattaacataaaagcttatttagttgcataagctgtttt 42852167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 13060635 - 13060546
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagcta 329  Q
    |||||||||| ||| ||| | | |||| ||| |||||| ||||||| ||||||| ||||| |||||| |||||||||||||||| |||||    
T  13060635 tagtttatgaaaaaacagcttatgaagttaccattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcattagcta 13060546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 17128261 - 17128314
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||| |||||||    
T  17128261 ttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattatt 17128314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 35083323 - 35083384
Alignment:
Q  272 aattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattt 332  Q
    ||||||||| ||||| ||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  35083323 aattttcatcagtgagaacttatgaattaacataaaagcttatttatttgcataaactattt 35083384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 40452477 - 40452408
Alignment:
Q  274 ttttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||| ||||||| ||||||| ||| | |||||  |||||||||||||||||||||||||||| ||||||    
T  40452477 ttttcgttagtgagaacttatgaataaacataatagcttatttatttgcataagctatttttcataagct 40452408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 29922195 - 29922127
Alignment:
Q  268 atacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||  ||||||| | ||||| |||||  ||||| ||||||||||||||||||||||||||||    
T  29922195 atacaattttttttagtgagagcttatgaattaatataaaagcttatttatttgcataagctatttttc 29922127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 42558688 - 42558648
Alignment:
Q  302 ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  42558688 ataaaagcttatttatttgcataagctatttttcataagct 42558648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 11912112 - 11912033
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||  ||||||| ||||||| |||| |||| || ||||||||||||||  ||| |||||||| ||||||    
T  11912112 gaagatacaatttttgttagtgagaacttatgaattaacatgaaagcttatttatttgctcaagatatttttcataagct 11912033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 335
Target Start/End: Original strand, 12467247 - 12467416
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttca 262  Q
    |||||||||||| ||||| |  || ||||||||||||||||||||| |||||||   |||||| |||| ||  |||||||  | |  | ||| ||| | |    
T  12467247 ttttgagtttattcaaaaaatgttatgcaaataaataagcttttatgtattatt---cataagcttgtcaaggtagttta--tga--aaaaaacagctta 12467339  T
Q  263 cgaagatacaattttcattagtgaaaacttataaattac----ataaaggcttatttatttgcataagctatttttc 335  Q
     ||||| ||||||||  ||||||| ||||||| ||||||    ||||| ||||||||||||||||||| ||||||||    
T  12467340 tgaagagacaatttttgttagtgagaacttatgaattactaacataaaagcttatttatttgcataagttatttttc 12467416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 20458564 - 20458489
Alignment:
Q  268 atacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||| || || | |||||||| |||| | |||| |||||||||||| ||||||||||||||| ||||||    
T  20458564 atacaattttcgttggtcagaacttatagattaaaataaaagcttatttatttacataagctatttttcataagct 20458489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 26003073 - 26003152
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| | ||| ||||||| | ||||  ||||||||||| |||||| |||||||| ||||||    
T  26003073 gaagatacaattttcgttagtgagagcttgtaaattaaaataaaaacttatttatttacataagttatttttcataagct 26003152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 29136836 - 29136765
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||||| | || ||||  |||||| ||||| |||||| |||||||||||||||||| ||||||||    
T  29136836 gaagatacaatttccgttggtgaggacttatgaattaacataaaagcttatttatttgcataaactattttt 29136765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 342255 - 342297
Alignment:
Q  300 acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| |||| ||||||||||||||||||||||| ||||||    
T  342255 acataaaagcttgtttatttgcataagctatttttcataagct 342297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 4728898 - 4728999
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||||| | ||| ||| ||||||| ||||| | | ||||||||||| | |||| |||||||||||| |||||||||| |||| |||    
T  4728898 tagtttatgaaaaaacagtttatgaa-atataattttccttagtaagagcttataaattaaaataaaagcttatttatttacataagctatatttcataa 4728996  T
Q  340 gct 342  Q
    |||    
T  4728997 gct 4728999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 6125401 - 6125439
Alignment:
Q  302 ataaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  6125401 ataaaagcttatttatttgcataagctatttttcataag 6125439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 342
Target Start/End: Complemental strand, 38461312 - 38461211
Alignment:
Q  244 tttatgataaatcagttcacgaagatacaattttcattagtgaaa--acttataaattaca-taaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||||| ||| ||||| | ||||||| ||||||  ||||||| |  |||||||||||| | ||||  ||||||||||| ||||||||||||||| ||||    
T  38461312 tttatgaaaaaacagtttatgaagatataatttttgttagtgagagaacttataaattaaaataaaaacttatttatttacataagctatttttcataag 38461213  T
Q  341 ct 342  Q
    ||    
T  38461212 ct 38461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 340
Target Start/End: Complemental strand, 780574 - 780501
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||||||||||||||| | |||||||| ||| | ||||| |||||| |||||  |||||||||||||| ||||    
T  780574 atacaattttcattagtcagaacttatagattaaaataaaagcttatctatttatataagctatttttcataag 780501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 1473339 - 1473392
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    ||||||| |||| || ||||| || ||||||||||||||||||||| |||||||    
T  1473339 ttttgagcttatacagaacaacttatgcaaataaataagcttttatgtattatt 1473392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 2577428 - 2577359
Alignment:
Q  274 ttttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||| ||||||| ||||||| ||||| |||||    |||||||||||||||||||||||||| ||||||    
T  2577428 ttttcgttagtgagaacttatgaattaacataacaatttatttatttgcataagctatttttcataagct 2577359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 3520482 - 3520445
Alignment:
Q  298 ttacataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  3520482 ttacataaaagcttatttatttgcgtaagctatttttc 3520445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 7364319 - 7364254
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagct 328  Q
    ||||||||||| ||  ||||||| ||||||| |||||  ||||| |||||||||||||||||||||    
T  7364319 gaagatacaatatttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagct 7364254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 11991296 - 11991341
Alignment:
Q  171 ttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    ||||||||||||| || || |||||||||||||||||| |||||||    
T  11991296 ttatgcaaaacaacttatgtaaataaataagcttttatgtattatt 11991341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 13739389 - 13739344
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttat 208  Q
    ||||||||||||| |||| || || |||||||||||||||||||||    
T  13739389 ttttgagtttatgaaaaataacttatgcaaataaataagcttttat 13739344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 17868192 - 17868135
Alignment:
Q  286 aaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||| ||||| |||||| | |||||||||||||||||||||||| | ||||||    
T  17868192 aaaacttatcaattaacataaaaggttatttatttgcataagctattttccataagct 17868135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 22202039 - 22201986
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    ||||||| ||||||||||||  || || |||||||||||||||||| |||||||    
T  22202039 ttttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattatt 22201986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 43010775 - 43010722
Alignment:
Q  147 gtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataa 200  Q
    |||||||| || | ||||||||||||||||||||||| ||  ||||||||||||    
T  43010775 gtttggattagacttattttgagtttatgcaaaacaacttacgcaaataaataa 43010722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 11163291 - 11163235
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttg 320  Q
    |||||||||||||| ||||||  ||||||| |||| ||||||| |||||||||||||    
T  11163291 aagatacaattttcgttagtgcgaacttatgaattaacataaaagcttatttatttg 11163235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 22201942 - 22201862
Alignment:
Q  264 gaagatacaattttcattagtga-aaacttat-aaattacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| |||| || ||| |||| |||| |||||||  |||||||||||| |||| ||||||||| ||||||    
T  22201942 gaagatacaattttcgttagcgagaaagttatgaaataacataaaaacttatttatttgtataaactatttttcataagct 22201862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 28357405 - 28357493
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagct 328  Q
    |||||||||| ||| ||||| | |||| | |||||||| ||||||| ||||||  |||||  |||||  ||||||||||||||||||||    
T  28357405 tagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgagaacttacgaattaagataaaaacttatttatttgcataagct 28357493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 335
Target Start/End: Original strand, 41125766 - 41125822
Alignment:
Q  280 ttagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||| ||||||| ||||| |||||| |||||| |||||||| ||||||||||||    
T  41125766 ttagtgagaacttatgaattaacataaaagcttatatatttgcaaaagctatttttc 41125822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 42809019 - 42808959
Alignment:
Q  156 aggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    |||| ||||||||||||||| ||||||| || |  |||||||||| ||||||| |||||||    
T  42809019 aggcttattttgagtttatggaaaacaacttatataaataaataaacttttatgtattatt 42808959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 342
Target Start/End: Complemental strand, 43265939 - 43265863
Alignment:
Q  267 gatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||| | ||||| |||||| ||| || |||||| |||||||||||| | |||||||||| || ||||||    
T  43265939 gatacaattttcgtaagtgacaacttacaaaataacataaaagcttatttatttccttaagctatttctcataagct 43265863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 161 - 342
Target Start/End: Original strand, 21788438 - 21788612
Alignment:
Q  161 tattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagtt 260  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||   |||||||||||||| ||||||| |     |||||||||| ||| ||  |    
T  21788438 tattttgagtttatgcaaaacatcttatgcaaataaataagcttttat---ttattattcataagcttgttaaga-----tagtttatgaaaaaacaact 21788529  T
Q  261 cacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     | ||||||| ||||||| ||||||| | ||||| |||| | ||||| ||||||||||||||||||| |||||||| ||||||    
T  21788530 tatgaagataaaattttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataagttatttttcataagct 21788612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 8832534 - 8832612
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  8832534 aagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataagct 8832612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 342
Target Start/End: Original strand, 4026909 - 4027080
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttca 262  Q
    ||||||| |||||||||||   || ||||||||||||||||||||| ||||||    |||||| |||| ||  |||||||     ||| ||| ||| | |    
T  4026909 ttttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattat----cataagcttgtcaaggtagttta-----tgaaaaaacagctta 4026999  T
Q  263 cgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     ||||||||||||||  ||||||| ||||||| ||||| |||||  |||||||||||||||||||||||||||| ||||||    
T  4027000 tgaagatacaatttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagctatttttcataagct 4027080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 38216095 - 38216174
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| ||||||| | ||| |||||| |||||||||||||||||||||||||||| ||||||    
T  38216095 gaagatacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgcataagctatttttcgtaagct 38216174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 334
Target Start/End: Complemental strand, 7480997 - 7480838
Alignment:
Q  171 ttatgcaaaacaaattttgcaaataaataagcttttatatattatt-attcataagtttgttaacatagtttagtttatgataaatcagttcacgaagat 269  Q
    ||||||||||||| || |||||||||||||  |||||||||||||| |||||||||||||| ||  |||||||       | ||| ||  | | ||||||    
T  7480997 ttatgcaaaacaacttatgcaaataaataatattttatatattattcattcataagtttgtgaaggtagtttat------aaaaaacaacttaggaagat 7480904  T
Q  270 acaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||||||| | ||||||| |||| |||||||  ||||||||||||||||| ||||||||    
T  7480903 acaattttcattagtcagaacttatgaattaacataaaaacttatttatttgcataatctattttt 7480838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 342
Target Start/End: Complemental strand, 33321415 - 33321243
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttca 262  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||| | |||||   |||||| |||| ||  |||||||     ||| ||| ||| | |    
T  33321415 ttttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttatt---cataagcttgtcaaggtagttta-----tgaaaaaacagctta 33321324  T
Q  263 cgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     ||||||||||||||  ||||||| | ||| | ||||| |||||||| |||||||||||||||||||||||| | ||||||    
T  33321323 tgaagatacaatttttgttagtgagagcttgtgaattaacataaaggtttatttatttgcataagctattttacataagct 33321243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 342
Target Start/End: Original strand, 37409603 - 37409798
Alignment:
Q  140 agggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagt 239  Q
    ||||||||||||||| || | |||||||||  |||||||||||| || ||||||||||||||||||||   | ||||||||   ||||||| ||     |    
T  37409603 agggcccgtttggattagtcttattttgagcgtatgcaaaacaacttatgcaaataaataagctttta---agtattattctctagtttgtcaa-----t 37409694  T
Q  240 ttagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttctta 338  Q
     |||||||||| ||| || || | ||| ||||||||||  ||| |||||||||  ||||| |||||||  |||| ||| ||| |||||||||||||| ||    
T  37409695 gtagtttatgaaaaaacaatttatgaaaatacaatttttgttattgaaaacttcgaaattaacataaaatcttagttacttgtataagctatttttcata 37409794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 42839331 - 42839259
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    |||||| |||||||| |||| |||||||||| ||||| |||||| ||||||||| ||||||||||||||||||    
T  42839331 gaagatgcaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 42839259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 4533402 - 4533477
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||  ||||||| ||||||| ||||| |||| | |||||||||||||||||||||||||||| ||||||    
T  4533402 atacaatttttgttagtgacaacttatgaattagcatagaagcttatttatttgcataagctatttttcataagct 4533477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 22898363 - 22898288
Alignment:
Q  268 atacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||| ||||| |||||||||| |||| | |||| |||||||||||| ||||||||||||||| ||||||    
T  22898363 atacaattttcgttagtcaaaacttatagattaaaataaaagcttatttatttacataagctatttttcataagct 22898288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 30382279 - 30382200
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||||| |||||||||| | | ||| |||||||||||| ||||| ||||||||| ||||||    
T  30382279 gaagatacaattttcgttagtgaaagcttataaattaaaacaaaagcttatttatttacataatctatttttcataagct 30382200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 34913491 - 34913417
Alignment:
Q  165 ttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagttta 242  Q
    ||||| ||||||||||||  || |||||||||||||||||||||    ||||||||||||||||||||| ||||||||    
T  34913491 ttgagcttatgcaaaacagcttatgcaaataaataagcttttat---gtattattcataagtttgttaagatagttta 34913417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 36501548 - 36501453
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    |||||||||| ||| ||| | | ||||||| ||||| | ||||||| |||| || ||||| |||||| ||||||||||||||||||||||||||||    
T  36501548 tagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatgaattaacataaaagcttatttatttgcataagctatttttc 36501453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 25836722 - 25836644
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||| |||||| || ||||||| ||||||| ||| ||||||| ||||||||||||||||||| |||| ||| ||||||    
T  25836722 gaagacacaattatcgttagtgagaacttatgaataacataaaagcttatttatttgcataaggtattcttcataagct 25836644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 32522079 - 32521977
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||||||| ||||||||||||||| ||||| | | |||||||||| | ||| |  ||||||||||| ||||||||||||| | |||    
T  32522079 tagtttatgaaaaaacagttcatgaagatacaattttcgttagtaagagcttataaattaaaatataaacttatttatttacataagctattttacataa 32521980  T
Q  340 gct 342  Q
    |||    
T  32521979 gct 32521977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 1768728 - 1768797
Alignment:
Q  138 ttagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagctttta 207  Q
    |||| ||||||||| || |||| ||||||||||||||||||||||  || |||||||||||||| |||||    
T  1768728 ttagagcccgtttgaattaggcttattttgagtttatgcaaaacagcttatgcaaataaataagttttta 1768797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 27703561 - 27703508
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    ||||||| ||||||||||||  || |||||||||||||||||||||||||||||    
T  27703561 ttttgagcttatgcaaaacagcttatgcaaataaataagcttttatatattatt 27703508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 887488 - 887560
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||||||||||  | ||||||| ||||| |||||| |||||| |||||||||||||| ||||||    
T  887488 gaagatacaattttcattagcaagaacttatgaattaacataaaagcttatctatttgcataagctgtttttc 887560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 4004895 - 4004967
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttc 335  Q
    |||| |||||||||| ||||||| ||||||| |||||| ||||| |||| ||||| |||||||||||||||||    
T  4004895 gaagctacaattttcgttagtgagaacttatgaattactataaaagcttttttatctgcataagctatttttc 4004967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 328
Target Start/End: Original strand, 5516036 - 5516217
Alignment:
Q  140 agggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagt 239  Q
    ||||||||||||||| |||| ||||||||| || |||||||||  || || ||| |||||||||| ||| | |||||   ||||||||||| ||     |    
T  5516036 agggcccgtttggattaggc-tattttgagcttttgcaaaacagcttatgtaaaaaaataagcttctatgtgttatt---cataagtttgtaaa-----t 5516126  T
Q  240 ttagtttatgataaat-cagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
     |||||||||| |||  ||||| |  || ||||||||||| ||||||| | |||||||||| ||| ||| |||||||||||||||||||||    
T  5516127 gtagtttatgaaaaaaacagtttataaaaatacaattttcgttagtgagagcttataaattaacacaaaagcttatttatttgcataagct 5516217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 23956273 - 23956209
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    |||||||||||||| ||| ||| |||||||||||| |||||||  ||||||||||||||||||||    
T  23956273 aagatacaattttcgttaatgagaacttataaattaacataaaaacttatttatttgcataagct 23956209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 9140858 - 9140780
Alignment:
Q  137 tttagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattat 215  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   | ||||||||||||| ||||||| ||||||    
T  9140858 tttagggaccgtttggatcaggcttattttgagcttatacaaaacatcgtatgcaaataaataaccttttatgtattat 9140780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 23956380 - 23956314
Alignment:
Q  138 ttagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagctt 204  Q
    |||| |||||||||||| |||| |||||| || ||||||||||||  || |||||||||||||||||    
T  23956380 ttagagcccgtttggattaggcttattttaagcttatgcaaaacagcttatgcaaataaataagctt 23956314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 31165098 - 31165170
Alignment:
Q  256 cagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    ||||| || |||||||| ||||| |||||| ||||||||||||| |||||||  ||||||||||||||||||||    
T  31165098 cagtttacaaagatacatttttcgttagtggaaacttataaattaacataaa-acttatttatttgcataagct 31165170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 27709769 - 27709717
Alignment:
Q  165 ttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatta 217  Q
    ||||| |||||||| |||  || ||||||||||||||||||||||||||||||    
T  27709769 ttgagattatgcaagacagcttatgcaaataaataagcttttatatattatta 27709717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 29774825 - 29774893
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||| ||||||| ||||||| |||| || |||| |||||||||||||| ||| |||||||||    
T  29774825 atacaattttcgttagtgagaacttatgaattaacgtaaaagcttatttatttgcttaaactatttttc 29774893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 446503 - 446582
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| | |||||||||| | ||||| ||||| |||||| |||||  |||||||| ||||||    
T  446503 gaagatacaattttcgttagtgagagcttataaattaaaataaaagcttacttatttacataaattatttttcataagct 446582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 5903651 - 5903686
Alignment:
Q  300 acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||| ||||||||||||||||||||||||||||    
T  5903651 acataaaagcttatttatttgcataagctatttttc 5903686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 11777060 - 11777131
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||| ||||  ||||||| |||||||||| || ||||||  |||||||||||||| |||||||||||    
T  11777060 gaagatacactttttgttagtgagaacttataaactaacataaaaccttatttatttgcagaagctattttt 11777131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 19683648 - 19683727
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||  ||||| |||||||||||||| | |||||  ||||| ||||| |||||| |||||||| ||||||    
T  19683648 gaagatacaatttttgttagtaaaaacttataaattaaaataaaaccttatctatttacataagttatttttcataagct 19683727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 755684 - 755642
Alignment:
Q  300 acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| |||| ||||||||||||||||||||||| ||||||    
T  755684 acataaaagcttctttatttgcataagctatttttcataagct 755642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 5903729 - 5903763
Alignment:
Q  301 cataaaggcttatttatttgcataagctatttttc 335  Q
    |||||| ||||||||||||||||||||||||||||    
T  5903729 cataaaagcttatttatttgcataagctatttttc 5903763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 29133676 - 29133614
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataag 326  Q
    |||||||||||||| ||| |||||||||||||||| ||| |||   |||||||||||||||||    
T  29133676 aagatacaattttcgttaatgaaaacttataaattgacacaaaaatttatttatttgcataag 29133614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 39592325 - 39592402
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| ||||||| ||||||| || |||| ||| | | ||| |||||||| ||||||||||||||||||| ||||||    
T  39592325 gaagatataattttctttagtgagaatttatgaataa-acaaaagcttatttctttgcataagctatttttcataagct 39592402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 736019 - 736112
Alignment:
Q  243 gtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    |||||||| |||  |||| | ||||||| ||||||  ||| ||| ||||||||||||| ||||||  ||||||||| | |||||||||||||||    
T  736019 gtttatgaaaaaatagtttatgaagatataatttttgttattgagaacttataaattaacataaaaacttatttatatacataagctatttttc 736112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 755845 - 755792
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    ||||||| ||||||||||||| ||  |||||||| ||||||||||| |||||||    
T  755845 ttttgagcttatgcaaaacaacttacgcaaataattaagcttttatgtattatt 755792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 30995979 - 30995942
Alignment:
Q  190 caaataaataagcttttatatattattattcataagtt 227  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  30995979 caaataaataaacttttatgtattattattcataagtt 30995942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 12223905 - 12223957
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaactta 293  Q
    |||||||||| ||| ||||| | |||||||| |||||||||||||| ||||||    
T  12223905 tagtttatgaaaaaacagtttatgaagataccattttcattagtgagaactta 12223957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 12267073 - 12267109
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta 300  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  12267073 gaagatataatttttattagtgaaaacttataaatta 12267109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 336
Target Start/End: Original strand, 32366202 - 32366298
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattacat-aaaggcttatttatttgcataagctatttttct 336  Q
    |||||||||| ||| ||||| | ||| |||| |||||| ||||| | | |||||||| || |  ||| |||||||||||| ||||||||||||||||    
T  32366202 tagtttatgaaaaaacagtttatgaatatacgattttcgttagtaagagcttataaaataaaacaaaagcttatttatttacataagctatttttct 32366298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 227
Target Start/End: Original strand, 37419925 - 37419965
Alignment:
Q  188 tgcaaataaataagcttttatata-ttattattcataagtt 227  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  37419925 tgcaaataaataagcttttatgtatttattattcataagtt 37419965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 45163895 - 45163823
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||| || ||| |||  ||||||| |||| |||| || |||||||||| |||||||||||||||||    
T  45163895 gaagatacaatatttatttgtgggaacttatgaattgacatgaaagcttatttatctgcataagctatttttc 45163823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 8e-25; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 165 - 342
Target Start/End: Complemental strand, 9572886 - 9572715
Alignment:
Q  165 ttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacg 264  Q
    ||||| ||||||||||||  |||||||||||||||||||||| ||| ||||||||||||||||||||||       |||||||||| ||| || || | |    
T  9572886 ttgagcttatgcaaaacagcttttgcaaataaataagctttt-tat-ttattattcataagtttgttaa-----ggtagtttatgaaaaaacaatttatg 9572794  T
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||| | ||||  ||||||| ||||||| |||| | ||||| |||||||||||||||||||||||||||| ||||||    
T  9572793 aagataaagtttttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagct 9572715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 342
Target Start/End: Original strand, 391151 - 391331
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagttt---agtttatgataaatcagt 259  Q
    ||||||| ||||||||||||  || ||||||||||||||||||| ||||| |||||||||||| |||| ||  |||| |   ||||||||| ||| || |    
T  391151 ttttgaggttatgcaaaacagcttatgcaaataaataagctttt-tatat-attattcataagcttgtcaatgtagtattgtagtttatgaaaaaacaat 391248  T
Q  260 tcacgaagatacaattttcattagtgaaaacttataaatta-cataaag-gcttatttatttgcataagctatttttcttaagct 342  Q
      ||||||||||||||||| |||| || ||||||| ||||| ||||||  ||||||||||||| |||||||||||||| ||||||    
T  391249 --acgaagatacaattttcgttagcgagaacttatgaattaacataaaaagcttatttatttggataagctatttttcataagct 391331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 37329445 - 37329343
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||||||||||| || |||| ||||||||||||| |||||| ||||||||||||||||||| |||||||| |||    
T  37329445 tagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaacttataaattaacataaaagcttatttatttgcataagttatttttcataa 37329346  T
Q  340 gct 342  Q
    |||    
T  37329345 gct 37329343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 35897626 - 35897552
Alignment:
Q  267 gatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||||||||||||||||||||| ||||||||| ||||||| | |||||||||| ||||||||||||||| ||||    
T  35897626 gatacaattttcattagtgaaaatttataaattaacataaaagtttatttatttacataagctatttttcataag 35897552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 48819352 - 48819454
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||||| ||||  ||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||||| |||    
T  48819352 tagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 48819451  T
Q  340 gct 342  Q
    |||    
T  48819452 gct 48819454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 340
Target Start/End: Complemental strand, 10850175 - 10849999
Alignment:
Q  162 attttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttc 261  Q
    |||||||| |||||||||| |  |||||||||||||||||||||||| |||||||   |||||| |||| ||| |||||||    |  | |||   |||     
T  10850175 attttgagcttatgcaaaatagtttttgcaaataaataagcttttatgtattatt---cataaggttgtcaacgtagtttatggaaaaaaaaacttgttt 10850079  T
Q  262 acgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaag 340  Q
    | ||| ||||||||||| ||| |||||||||||||||| |||| || ||||||||||||| ||||| |||||||| ||||    
T  10850078 atgaaaatacaattttcgttaatgaaaacttataaattaacatgaaagcttatttatttgtataagttatttttcataag 10849999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 10365250 - 10365325
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||| ||||| ||||||| ||||||| |||||| ||||||| |||||||||||||||||||| ||||||    
T  10365250 atacaattttcgttagtaaaaacttttaaattaacataaaagcttattcatttgcataagctatttttcataagct 10365325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 28690080 - 28690159
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||| |||||||| || || | ||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  28690080 gaagatacaatttttattagtgagaaattctgaattaacataaaagcttatttatttgcataagctatttttcataagct 28690159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 17628458 - 17628356
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| | ||| | ||||||||||||||| ||||||| | ||| ||||||| | |||| |||||||||||| ||||||||||||||| |||    
T  17628458 tagtttatgaaaaaaccgtttatgaagatacaattttcgttagtgagagcttctaaattaaaataaaagcttatttatttacataagctatttttcataa 17628359  T
Q  340 gct 342  Q
    |||    
T  17628358 gct 17628356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 22593416 - 22593338
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||  ||||||| ||||||||||||| |||||| ||||||||||||||||||||| |||| | ||||||    
T  22593416 aagatacaatttttgttagtgagaacttataaattaacataaaagcttatttatttgcataagctgttttgcataagct 22593338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 26988201 - 26988303
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | |||||||||||| || ||||| ||||||||| ||||| |||||| ||| |||||||||||||| ||||||||| |||    
T  26988201 tagtttatgaaaaaacagcttatgaagatacaattgtcgttagtaaaaacttatgaattaacataaaagctaatttatttgcataaactatttttcataa 26988300  T
Q  340 gct 342  Q
    |||    
T  26988301 gct 26988303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 32497305 - 32497203
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||||| | || |||||||||||| ||||||| | |||||||||| | ||||| | |||||||||| ||||||||||||||| |||    
T  32497305 tagtttatgaaaaaacagtttatgaggatacaattttcgttagtgagagcttataaattaaaataaaagtttatttatttacataagctatttttcataa 32497206  T
Q  340 gct 342  Q
    |||    
T  32497205 gct 32497203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 41196743 - 41196641
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||||||||||  ||||||| | ||| | ||||| ||||||||||||||||||||||||||||||||| | |||    
T  41196743 tagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggcttatttatttgcataagctattttacataa 41196644  T
Q  340 gct 342  Q
    |||    
T  41196643 gct 41196641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 46501011 - 46500939
Alignment:
Q  264 gaagatacaattttca-ttagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    |||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||||||||||| |||||||    
T  46501011 gaagatacaattttccgttagtgaaaacttataaatcaacataaaagcttatttatttgcataagttattttt 46500939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 47413467 - 47413527
Alignment:
Q  283 gtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| |||||||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  47413467 gtgaaaaattataaattaacataaaagcttatttatttgcataagctatttttcataagct 47413527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 15515357 - 15515278
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| ||||||| |||| |||| || |||||||||||| | ||||||||||||| ||||||    
T  15515357 gaagatacaattttcgttagtgagaacttatgaattaacatgaaagcttatttatttacttaagctatttttcataagct 15515278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 15791459 - 15791538
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||| ||| | ||||||||||| | |||| |||||||||||| ||||||||||||||| ||||||    
T  15791459 gaagatacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataagctatttttcataagct 15791538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 37712143 - 37712222
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||| |||| ||||| | ||||||| ||||| |||||| | |||||||||||||||||||||||||| ||||||    
T  37712143 gaagatacaactttcgttagtaagaacttatgaattaacataaaagtttatttatttgcataagctatttttcgtaagct 37712222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 42591458 - 42591537
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||| ||||| ||||||||| ||||||||||| | ||||  ||||||||||| ||||||||||||||| ||||||    
T  42591458 gaagatacacttttcgttagtgaaagcttataaattaaaataaaaacttatttatttacataagctatttttcataagct 42591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 3069887 - 3069794
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttt 333  Q
    |||||||||| ||| ||| | | |||||||||||||||| |||||| ||||||| |||| ||||||| |||||||||||  |||||||| ||||    
T  3069887 tagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaacttatgaattaacataaaagcttatttattgtcataagctgtttt 3069794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 14461074 - 14460981
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttt 333  Q
    |||||||||| ||| ||||| |  |||||||||||||||||||||| |||||||||||| |||||||   || ||||||||| ||| |||||||    
T  14461074 tagtttatgaaaaaacagtttataaagatacaattttcattagtgagaacttataaattaacataaaaatttgtttatttgcgtaaactatttt 14460981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 241 - 325
Target Start/End: Complemental strand, 16888999 - 16888914
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataa 325  Q
    |||||||||| ||| ||| | | ||||||||||||||||||||||| || |||| | || ||||||| ||||||||||||||||||    
T  16888999 tagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttatgacttaacataaaagcttatttatttgcataa 16888914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 332
Target Start/End: Complemental strand, 6337789 - 6337697
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattt 332  Q
    |||||||||| ||| ||| | | ||||||||||||||  |||| || ||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  6337789 tagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaacttatgaattaacataaaagcttatttgtttgcataagctattt 6337697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 36259324 - 36259236
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    |||||||||| ||| ||||| |  || ||||||||||| ||| |||| ||||||||||| | ||||| |||||||||||||||||||||    
T  36259324 tagtttatgaaaaaacagtttataaacatacaattttcgttaatgaagacttataaattaatataaaagcttatttatttgcataagct 36259236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 8410209 - 8410288
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| | ||| ||||||| | |||| |||||||||||| || |||||||||||| ||||||    
T  8410209 gaagatacaattttcgttagtgagagcttgtaaattaaaataaaagcttatttatttacagaagctatttttcataagct 8410288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 17814270 - 17814345
Alignment:
Q  268 atacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||| ||||| | |||||||| |||| | |||| |||||||||||| ||||||||||||||| ||||||    
T  17814270 atacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataagctatttttcataagct 17814345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 19395850 - 19395929
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||||| |||||||||| | |||||  ||||||||| |  |||||||||||||| ||||||    
T  19395850 gaagatacaattttcgttagtgaaagcttataaattaaaataaaaacttatttatatatataagctatttttcataagct 19395929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 20169310 - 20169252
Alignment:
Q  286 aaaacttataaat--tacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||  |||||||| ||||||||||||||||||||| |||||| ||||||    
T  20169310 aaaacttataaataatacataaaagcttatttatttgcataagctgtttttcataagct 20169252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 41130070 - 41130149
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||||||||||| |||||||  |||| |||||||  |||||||||| | ||||| |||||||| ||||||    
T  41130070 gaagatacaattttcattagtgcaaacttaagaattaacataaaatcttatttattagaataagttatttttcataagct 41130149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 333
Target Start/End: Original strand, 20169232 - 20169410
Alignment:
Q  148 tttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagttta 247  Q
    ||||||| | || ||||||||| ||||| ||||||  || |||||||||||||||||||||    ||||||| |||||||| |||| |||   |||||||    
T  20169232 tttggattaagcttattttgagcttatgaaaaacagcttatgcaaataaataagcttttat---gtattatttataagttt-ttaa-ata---tagttta 20169323  T
Q  248 tgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttt 333  Q
    ||| ||| ||||| |  || ||||||||| | | | ||| |||||| ||||| |||||||  |||||||||||||||||||| ||||    
T  20169324 tgaaaaaacagtttataaatatacaatttccgtcaatgagaacttaaaaattaacataaaaacttatttatttgcataagctgtttt 20169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 4068191 - 4068263
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttc 335  Q
    |||||||| |||||| ||||||| ||||||| |||||  ||||| | |||||||||||||||||||| |||||    
T  4068191 gaagatactattttcgttagtgagaacttatgaattaatataaaagtttatttatttgcataagctacttttc 4068263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 340
Target Start/End: Original strand, 22103163 - 22103262
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| |||| |||| | ||| ||||||||||| ||||| | |||||||| |||| | |||| |||| ||||||| ||||||||||||||| |||    
T  22103163 tagtttatgaaaaatgagtt-atgaaaatacaattttcgttagttagaacttatagattaaaataaaagcttctttatttacataagctatttttcataa 22103261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 342
Target Start/End: Original strand, 28870286 - 28870358
Alignment:
Q  271 caattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||| ||||||| ||||||| ||| | |||||| ||||||||||||||| ||| |||||||| ||||||    
T  28870286 caattttctttagtgagaacttatgaatgaacataaaagcttatttatttgcaaaagttatttttcataagct 28870358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 36423059 - 36423008
Alignment:
Q  188 tgcaaataaataagcttttatatattattattcataagtttgttaacatagttta 242  Q
    |||||||||||||||||||||   ||||||||||||||||||||||  |||||||    
T  36423059 tgcaaataaataagcttttat---ttattattcataagtttgttaaggtagttta 36423008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 296
Target Start/End: Original strand, 49971242 - 49971360
Alignment:
Q  171 ttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagata 270  Q
    ||||||||||||| || ||||||||||||  | |||||   |||||||| ||||| |||||||     | |||||||||| ||| ||| | |||||||||    
T  49971242 ttatgcaaaacaacttatgcaaataaatattcctttat---ttattatttataagcttgttaa-----tgtagtttatgaaaaaacagcttacgaagata 49971333  T
Q  271 caattttcattagtga-aaacttataa 296  Q
    |||||||| ||||||| ||||||||||    
T  49971334 caattttcgttagtgagaaacttataa 49971360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 3116072 - 3115993
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||| | | |||||||||| | ||||| ||||| |||||| |||||| |||||||| ||||||    
T  3116072 gaagatacaattttcgttagtaagatcttataaattaaaataaaagcttacttatttacataagttatttttcataagct 3115993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 5347234 - 5347309
Alignment:
Q  268 atacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||| ||| | | |||||||| |||| | |||| |||||||||||| ||||||||||||||| ||||||    
T  5347234 atacaattttcgttaatcagaacttatagattaaaataaaagcttatttatttacataagctatttttcataagct 5347309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 340
Target Start/End: Original strand, 13038955 - 13039100
Alignment:
Q  188 tgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagatacaattttcattagtgaa 287  Q
    |||||||||||||||||||||||||||||   ||| || |||||||  |||||||     ||| ||| ||  | | ||||||| | ||||| |||||||     
T  13038955 tgcaaataaataagcttttatatattatt---catgagcttgttaaggtagttta-----tgaaaaaacaacttatgaagataaagttttcgttagtgag 13039046  T
Q  288 aacttataaattac-ataaaggcttatttatttgcataagctatttttcttaag 340  Q
    || |||| |||||  ||||| | |||||||||||||||||||||||||| ||||    
T  13039047 aagttatgaattaatataaaagtttatttatttgcataagctatttttcataag 13039100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 31249735 - 31249830
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    |||||||||||||   |||| | ||||||||||||||||||||||| ||  ||| |||| | ||||| | ||||||||||||| ||| ||||||||    
T  31249735 tagtttatgataagatagtttatgaagatacaattttcattagtgagaatctatgaattaatataaaagtttatttatttgcaaaagttatttttc 31249830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 46473075 - 46473130
Alignment:
Q  161 tattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    ||||||||| ||||||||||||  || || |||||||||||||||||| |||||||    
T  46473075 tattttgagcttatgcaaaacagcttgtgtaaataaataagcttttatttattatt 46473130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 50919563 - 50919634
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||||||| ||| | |||||| ||||||| |||| || ||||||||||||||||||  |||||||    
T  50919563 gaagatacaattttcgttaataaaaactaataaattaacatgaaagcttatttatttgcataatttattttt 50919634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 13412486 - 13412392
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattacataaaggcttatttatttgcataagctatttttc 335  Q
    |||||||||| ||| |  |||| |||||||||| |||  ||||||| | ||||||||||| |  || |||||||||||  |||||||||||||||    
T  13412486 tagtttatgaaaaaaccattcatgaagatacaaattttgttagtgagagcttataaattaaaagaaagcttatttattcacataagctatttttc 13412392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 26435208 - 26435106
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| | ||| | ||||||||| ||||| ||| ||| ||||||| ||||| |||| | |  ||||||||||||||| ||||||||| |||    
T  26435208 tagtttatgaaaaaactgtttatgaagatacatttttcgttactgagaacttatgaattaacatataagtctatttatttgcataaactatttttcataa 26435109  T
Q  340 gct 342  Q
    |||    
T  26435108 gct 26435106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 342
Target Start/End: Complemental strand, 15235193 - 15235092
Alignment:
Q  242 agtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||||||| ||| | ||| | ||||| || |||||| ||||| | | ||||||||||| | ||||  ||||||||||| ||||||||||||||| ||||    
T  15235193 agtttatgaaaaaacggtttatgaagaaaccattttcgttagtaagagcttataaattaaaataaaaacttatttatttacataagctatttttcataag 15235094  T
Q  341 ct 342  Q
    ||    
T  15235093 ct 15235092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 31378829 - 31378800
Alignment:
Q  188 tgcaaataaataagcttttatatattatta 217  Q
    ||||||||||||||||||||||||||||||    
T  31378829 tgcaaataaataagcttttatatattatta 31378800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 35282604 - 35282539
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    ||||||| |||||| |||||||||||||||| |||| | ||||| |  ||||||||||||||||||    
T  35282604 gaagataaaattttaattagtgaaaacttatgaattaatataaaagtctatttatttgcataagct 35282539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 38781131 - 38781216
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataa 325  Q
    |||||||||| ||||||| | | ||||  ||||||||  ||||||| ||||||| ||||| |||||| || |||||||||||||||    
T  38781131 tagtttatgaaaaatcagcttatgaagccacaattttggttagtgagaacttatgaattaacataaaagcatatttatttgcataa 38781216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 42367072 - 42367105
Alignment:
Q  309 cttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||||||||||||||| ||||||    
T  42367072 cttatttatttgcataagctatttttcataagct 42367105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 8062019 - 8061947
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    |||||||||||||||||| |||| | |||||||||| | |||||   |||||||||| ||||| |||||||||    
T  8062019 gaagatacaattttcatttgtgagagcttataaattaaaataaaaatttatttatttacataacctatttttc 8061947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 12828201 - 12828277
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaag 340  Q
    |||||| ||||||| ||| |||||||||||| ||| | ||||| | |||| ||||||||||||| ||||||| ||||    
T  12828201 aagataaaattttcgttaatgaaaacttatagattaatataaaagtttatctatttgcataagcaatttttcataag 12828277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 19220288 - 19220328
Alignment:
Q  302 ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||| |||||||||||||||||| ||||||||| ||||||    
T  19220288 ataaaagcttatttatttgcataaactatttttcataagct 19220328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 25485801 - 25485889
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagct 328  Q
    |||||||||| ||| || || | ||||||| |||||||  ||||||||| ||||||||||  |||||   |||||||||||||||||||    
T  25485801 tagtttatgaaaaaacaatttatgaagataaaattttcgctagtgaaaatttataaattaatataaaaatttatttatttgcataagct 25485889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 31378760 - 31378681
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatt--acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||  ||||| ||||||||||||||  | ||||| ||||| |||||||| |||  |||||||| ||||||    
T  31378760 aagatacaatttttgttagtaaaaacttataaattaaatataaaagcttaattatttgcgtaaattatttttcataagct 31378681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 35897718 - 35897667
Alignment:
Q  171 ttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataag 225  Q
    ||||||||||||| || |||||||||||||| ||||||   ||||||||||||||    
T  35897718 ttatgcaaaacaacttatgcaaataaataagtttttat---ttattattcataag 35897667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 41576405 - 41576337
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatt 331  Q
    ||||||| ||||||  ||||||| |||||||| |||| |||||| | |||||||||||||||| |||||    
T  41576405 gaagatataatttttgttagtgataacttatatattaacataaaagtttatttatttgcataatctatt 41576337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 42363713 - 42363753
Alignment:
Q  302 ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||| |||||||||||||||||||| |||||| ||||||    
T  42363713 ataaagacttatttatttgcataagctctttttcataagct 42363753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 29877622 - 29877792
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttca 262  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||| |||||||   |||||| ||| |||  |||||||     ||| ||| ||| | |    
T  29877622 ttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattatt---cataagcttgctaaggtagttta-----tgaaaaagcagctta 29877713  T
Q  263 cgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaag 340  Q
     ||||||||||||||  ||||||| ||||||| ||||| |||||| |||||| ||||||||||||||||||||| ||||    
T  29877714 tgaagatacaatttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataagctatttttcataag 29877792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 342
Target Start/End: Original strand, 36740912 - 36741059
Alignment:
Q  188 tgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagatacaattttcattagtgaa 287  Q
    ||||||||||||||||||||||||||||    |||||| |||| ||   |||  ||||||||| ||  ||||||| |||||||||||||||||||||||     
T  36740912 tgcaaataaataagcttttatatattatg---cataagcttgtcaa---agt--agtttatgaaaatacagttcatgaagatacaattttcattagtgag 36741003  T
Q  288 aacttataaat-tacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| |||  ||| ||| |||||||||||||||||||||||||||| ||||||    
T  36741004 aacttatgaatcaacacaaaagcttatttatttgcataagctatttttcataagct 36741059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 241 - 340
Target Start/End: Original strand, 897023 - 897123
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| || || ||| |||||| |||||| |||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||| |||    
T  897023 tagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaacttataaattaatataaaagcttatttatttgcataaactatttttcataa 897122  T
Q  340 g 340  Q
    |    
T  897123 g 897123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 175 - 342
Target Start/End: Complemental strand, 12495737 - 12495575
Alignment:
Q  175 gcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagatacaat 274  Q
    ||||||||  || ||||||||||||||||||||| |||||||   |||||| |||| || |     |||||||||| ||| ||| | |  ||||||||||    
T  12495737 gcaaaacagcttatgcaaataaataagcttttatgtattatt---cataagcttgtcaaaagg---tagtttatgaaaaaacagctaatcaagatacaat 12495644  T
Q  275 tttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     ||||||||||| |||||||||||| |||||||  ||||||||||||||||||||| ||||| ||||||    
T  12495643 attcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagct 12495575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 36255046 - 36254968
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagc 341  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||| |||||||||| ||||||||||||||||| |||||    
T  36255046 gaagatacaattttaattagtgagaacttatgaattaacataaaagcttatttatctgcataagctatttttcataagc 36254968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 48591457 - 48591355
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||||||||||| ||| ||| ||||||| ||||| | |||| |||||||||||||||||||||||||||| |||    
T  48591457 tagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaacttatgaattaacgtaaaagcttatttatttgcataagctatttttcataa 48591358  T
Q  340 gct 342  Q
    |||    
T  48591357 gct 48591355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 9319101 - 9319190
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagcta 329  Q
    |||||||||| ||| ||||| | |||| |||||||||||||| |||||||||| ||||| ||||||| |||||||||||| |||||||||    
T  9319101 tagtttatgaaaaaacagtttatgaagctacaattttcattactgaaaacttaaaaattaacataaaagcttatttatttacataagcta 9319190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 342
Target Start/End: Original strand, 23297421 - 23297590
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttca 262  Q
    ||||||| |||||||||| |  || ||||||||||||||||||||| |||||||   ||||||||||| ||  |||||||        | || ||| | |    
T  23297421 ttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattatt---cataagtttgtcaaggtagttta--------tgaaacagctta 23297509  T
Q  263 cgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     ||||||||||||||  |||| || ||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  23297510 tgaagatacaatttttgttagcgagaacttatgaattagcataaaagcttatttatttgcataagctatttttcataagct 23297590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 342
Target Start/End: Original strand, 41228888 - 41229058
Alignment:
Q  165 ttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacg 264  Q
    ||||| ||||||||||||  || ||||  |||||| ||||||||   |||||||||||||| |||||||  |||||||     ||| ||| ||  | | |    
T  41228888 ttgagcttatgcaaaacagcttatgcaggtaaataggcttttat---ttattattcataagcttgttaaggtagttta-----tgaaaaaacaactgatg 41228979  T
Q  265 aagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||||||||| | ||||||| |||||  ||||| ||| |||||||||||||||||||||||| ||||||    
T  41228980 aagatacaattttcattagttagaacttatgaattaatataaaagctaatttatttgcataagctatttttcataagct 41229058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 34526347 - 34526268
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||||  |||||| ||||||| ||||| |||||| |||||||||||||||||| ||||||||| ||||||    
T  34526347 gaagatacaattttccatagtgagaacttatgaattaacataaaagcttatttatttgcataaactatttttcataagct 34526268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 488393 - 488323
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||||| |||||||| ||||||| ||||| |||||| |||||||||||| ||||||||||||||    
T  488393 aagatacaatttttattagtgagaacttatgaattaacataaaagcttatttatttccataagctattttt 488323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 17222882 - 17222984
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||||||||||| ||||| | ||||||| ||||| ||||||  |||||||||||| |||||||||||||| |||    
T  17222882 tagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttatgaattaacataaaaacttatttatttgaataagctatttttcataa 17222981  T
Q  340 gct 342  Q
    |||    
T  17222982 gct 17222984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 18630928 - 18630826
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||| | ||||| ||||||| ||||||| |||||  ||||| |||||||||||||||||||||||||||| |||    
T  18630928 tagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataa 18630829  T
Q  340 gct 342  Q
    |||    
T  18630828 gct 18630826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 42617263 - 42617161
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| |||  |||| | |||||||  |||||| |||||||||||||||||||| | |||||  ||||||||||| ||||||||||||||| |||    
T  42617263 tagtttatgaaaaaatagtttatgaagatatgattttcgttagtgaaaacttataaattaaaataaaaacttatttatttacataagctatttttcataa 42617164  T
Q  340 gct 342  Q
    |||    
T  42617163 gct 42617161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 334
Target Start/End: Complemental strand, 27368270 - 27368091
Alignment:
Q  148 tttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagttta 247  Q
    ||||||| |||| ||||||||  ||||| ||||||| || |||||||||||||||||||||||||   ||||||||||||||| ||     | ||| |||    
T  27368270 tttggattaggcttattttgaacttatgtaaaacaacttatgcaaataaataagcttttatatat---tattcataagtttgtcaa-----tgtagctta 27368179  T
Q  248 tgataaatcagttcacgaagatacaattttcattagtgaaaacttataaa-ttacataaaggcttatttatttgcataagctattttt 334  Q
    ||| ||| ||||| |  ||||||||||| || ||  ||||| | || ||| | ||||||| ||||||||||||| ||||| |||||||    
T  27368178 tgaaaaaacagtttataaagatacaattatcgttgatgaaaccataaaaagtaacataaatgcttatttatttgaataagatattttt 27368091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 29996742 - 29996689
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    |||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  29996742 ttttgagtttttgcaaaacaatttatgcaaataaataagcttttatatattatt 29996689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 48687011 - 48687080
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttt 333  Q
    |||||||||||||||||||||| ||||||| |||| ||||| | | ||||||||||||||||||||||||    
T  48687011 aagatacaattttcattagtgagaacttatgaattaacatataagtttatttatttgcataagctatttt 48687080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 18424380 - 18424211
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttca 262  Q
    ||||||| ||||||||||||| || | ||||||||||||||||||| |||||||   |||||  |||| ||  |||||||     ||| ||| || || |    
T  18424380 ttttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattatt---cataaacttgtgaaggtagttta-----tgaaaaa-caattta 18424290  T
Q  263 cgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaag 340  Q
     ||||||||||||||  ||| ||||||||||| ||||| |||||| |||||||||||| ||| ||||||||||| ||||    
T  18424289 tgaagatacaatttttgttattgaaaacttatgaattaacataaaagcttatttattttcatgagctatttttcataag 18424211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 28074440 - 28074512
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttat-aaattacataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||||| |||| |||||||| | |||| |||||||  |||||||||||||||||||||||||||    
T  28074440 gaagatacaattttcgttagcgaaaacttgtgaaataacataaaatcttatttatttgcataagctatttttc 28074512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 243 - 342
Target Start/End: Original strand, 41071405 - 41071505
Alignment:
Q  243 gtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagc 341  Q
    ||||||| |||| ||| | | |||| ||||||| |||||||||| ||||| ||||||| |||||| |||||||||||| | ||||||||||||| |||||    
T  41071405 gtttatgttaaagcagcttatgaagttacaattctcattagtgagaacttgtaaattaacataaaagcttatttattttcttaagctatttttcataagc 41071504  T
Q  342 t 342  Q
    |    
T  41071505 t 41071505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 9153588 - 9153521
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||||| ||||| || |||||||||| |||||| | |||||||||||||||||||||||||    
T  9153588 atacaattttcatcagtgagaatttataaattaacataaaagtttatttatttgcataagctattttt 9153521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 825734 - 825824
Alignment:
Q  240 ttagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagcta 329  Q
    ||||||||||| ||| ||| ||| ||||||||| ||||  ||||||||| ||||| |||| |||||||  |||||||||||||||||||||    
T  825734 ttagtttatgaaaaaacagctcatgaagatacattttttgttagtgaaagcttatgaattaacataaaatcttatttatttgcataagcta 825824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 4603365 - 4603263
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||||| | ||||||||||||||| ||||||| |  ||||||||| | ||||| |||||||||||| |||||  |||||||| |||    
T  4603365 tagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagtttataaattaaaataaaagcttatttatttacataaaatatttttcataa 4603266  T
Q  340 gct 342  Q
    |||    
T  4603265 gct 4603263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 7148852 - 7148918
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttt 333  Q
    ||||||||||| ||||| | ||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  7148852 atacaattttctttagtcagaacttatgaattagcataaaagcttatttatttgcataagctatttt 7148918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 8130560 - 8130634
Alignment:
Q  269 tacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||  ||||||||||||||| ||||| ||||||  |||||||||||||| |||||||||||| ||||||    
T  8130560 tacaatttttgttagtgaaaacttatgaattaacataaaaacttatttatttgcacaagctatttttcataagct 8130634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 22273833 - 22273935
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||||||||||  ||||||| || |||| ||||| |||||| | |||||||||||||||| ||||||||| |||    
T  22273833 tagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaagttatgaattaacataaaagtttatttatttgcataatctatttttcgtaa 22273932  T
Q  340 gct 342  Q
    |||    
T  22273933 gct 22273935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 42153171 - 42153093
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||| |||||||| ||||||| |||| || ||||| |||||| |||||||||||||||||||||||||| | ||||||    
T  42153171 aagatgcaattttcgttagtgacaactcatgaattaacataaaagcttatttatttgcataagctattttacgtaagct 42153093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 8601277 - 8601342
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    ||||||||||||||  |||||||||| ||||||||| |||| || |||||||||||||||||||||    
T  8601277 gaagatacaatttttgttagtgaaaaattataaattaacattaaagcttatttatttgcataagct 8601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 342
Target Start/End: Original strand, 35405738 - 35405838
Alignment:
Q  242 agtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||||||| ||| ||| | | ||||||| ||||||| ||||| || || ||| ||||| |||||| |||||||||||||||||||||||||||| ||||    
T  35405738 agtttatgaaaaaacagcttatgaagatagaattttcgttagt-aagacctattaattaacataaaagcttatttatttgcataagctatttttcataag 35405836  T
Q  341 ct 342  Q
    ||    
T  35405837 ct 35405838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 3564305 - 3564361
Alignment:
Q  287 aaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||| |||||| | |||||||||||||||||||||||||| ||||||    
T  3564305 aaacttataaattaacataaaagattatttatttgcataagctatttttcataagct 3564361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 11256671 - 11256599
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||||  |||| || ||||||| ||||| |||||| |||||||||||||||||| |||||||||    
T  11256671 gaagatacaattttagttagcgagaacttatgaattaacataaaagcttatttatttgcataaactatttttc 11256599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 342
Target Start/End: Complemental strand, 46704370 - 46704201
Alignment:
Q  165 ttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacg 264  Q
    ||||| ||||| ||||||| || ||||||||| |||||||||||   ||||||||||| || |||||||  |||||||     ||| ||| ||| | | |    
T  46704370 ttgagcttatgtaaaacaacttatgcaaataa-taagcttttat---ttattattcatgagcttgttaaggtagttta-----tgaaaaaacagcttatg 46704280  T
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||| ||||||||||||||| ||||||| |||| | |||||   ||| ||||||||||||| |||||||| ||||||    
T  46704279 aagataaaattttcattagtgagaacttatgaattaatataaaaagttacttatttgcataagttatttttcataagct 46704201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 15179897 - 15179972
Alignment:
Q  268 atacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||| ||||| | |||||||| |||| | |||| |||||||||||| ||||||||||||||| ||||||    
T  15179897 atacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataagctatttttcataagct 15179972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 15184599 - 15184658
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta 300  Q
    |||||||||| ||| ||||| | ||||||||||||||| ||||||| |||||||||||||    
T  15184599 tagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagaacttataaatta 15184658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 19414192 - 19414263
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttc 335  Q
    |||||||||||||| ||||||| | |||||||| || | |||| |||||||||||| |||||||||||||||    
T  19414192 aagatacaattttcgttagtgagagcttataaagtaaaataaaagcttatttatttacataagctatttttc 19414263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 38345832 - 38345761
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    |||||||||||||| |||||  | ||||||| ||||| |||||| |||||||||||| ||||||||||||||    
T  38345832 gaagatacaatttttattagccagaacttatgaattaacataaaagcttatttatttacataagctattttt 38345761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 43699455 - 43699388
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    |||||||||||| |||||  ||||||| ||||| ||||||  ||||||||||||||||||||||||||    
T  43699455 atacaattttcactagtgggaacttatgaattaacataaaaacttatttatttgcataagctattttt 43699388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 23335695 - 23335797
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||||||||||||| ||||| ||||||| |||| |||||||  ||| |||| |||||| |||||||| || |||    
T  23335695 tagtttatgaaaaaacagcttatgaagatacaattttcataagtgagaacttatgaattaacataaaaacttgtttaattgcattagctatttctcataa 23335794  T
Q  340 gct 342  Q
    |||    
T  23335795 gct 23335797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 46176012 - 46175910
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| |||  |||| | |||||||||||||||  |||| | | ||||||||||| | |||| |||||||||||| |||||| |||||||| |||    
T  46176012 tagtttatgaaaaaatagtttatgaagatacaattttcgctagtaagagcttataaattaaaataaatgcttatttatttacataagttatttttcataa 46175913  T
Q  340 gct 342  Q
    |||    
T  46175912 gct 46175910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 34633470 - 34633531
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    ||||||||||||| ||||| ||||||| |||| ||||||| |||||||||||||| ||||||    
T  34633470 atacaattttcataagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 34633531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 335
Target Start/End: Original strand, 48667770 - 48667818
Alignment:
Q  288 aacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  48667770 aacttatgaattaacataaaagcttatttatttgcataagctatttttc 48667818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 213048 - 212975
Alignment:
Q  165 ttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagttta 242  Q
    ||||| ||||||||||||| || |||||||||||||| ||||||   |||||||||||||| |||||||  |||||||    
T  213048 ttgagcttatgcaaaacaacttatgcaaataaataag-ttttat---ttattattcataagcttgttaaggtagttta 212975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 342
Target Start/End: Complemental strand, 2548081 - 2547978
Alignment:
Q  240 ttagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttctta 338  Q
    ||||||||||| ||| || || | ||||||| |||||||  || ||| |||||||||||||  |||||  |||||||||||||||||||| ||| || ||    
T  2548081 ttagtttatgaaaaaacaatttatgaagataaaattttcgctaatgagaacttataaattaatataaaaacttatttatttgcataagctctttctcata 2547982  T
Q  339 agct 342  Q
    ||||    
T  2547981 agct 2547978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 2702721 - 2702646
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||||| | | ||||| ||||| |||||| ||||| ||||||||||| ||| |||||| ||||||    
T  2702721 atacaattttcattagtaagatcttatgaattaacataaaagcttaattatttgcatatgctctttttcgtaagct 2702646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 11298658 - 11298737
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| | ||||| ||||||| ||||||  |||||  ||||| | |||||||||||||||||||||||||| ||||||    
T  11298658 gaagataaagttttcgttagtgagaacttaagaattattataaaagtttatttatttgcataagctatttttcataagct 11298737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 11679137 - 11679066
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||||||| ||||| |||| ||||||||| |||||||   || |||||||| |||||||||||||    
T  11679137 gaagatacaattttcgttagttaaaatttataaattaacataaaatgttttttatttgtataagctattttt 11679066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 11687416 - 11687345
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||||||| ||||| |||| ||||||||| |||||||   || |||||||| |||||||||||||    
T  11687416 gaagatacaattttcgttagttaaaatttataaattaacataaaatgttttttatttgtataagctattttt 11687345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 342
Target Start/End: Original strand, 12495701 - 12495744
Alignment:
Q  299 tacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||    
T  12495701 tacataaaagcttatttatttgcataagctgttttgcttaagct 12495744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 23297469 - 23297426
Alignment:
Q  299 tacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||| |||||||||||||||||||||||||| | ||||||    
T  23297469 tacataaaagcttatttatttgcataagctattttgcataagct 23297426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 30956736 - 30956839
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagt-gaaaacttataaattaca-taaaggcttatttatttgcataagctatttttctta 338  Q
    |||||||||| ||| | ||| |||||||| || ||||  ||||| |||||||||| |||||   ||||  ||||||||||||||||||||||||||| ||    
T  30956736 tagtttatgaaaaaacggtttacgaagatccagtttttgttagttgaaaacttatgaattaatgtaaaaacttatttatttgcataagctatttttcata 30956835  T
Q  339 agct 342  Q
    ||||    
T  30956836 agct 30956839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 31022477 - 31022548
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    |||||||||||||| | ||||||||||||| |||| |  |||| ||||||||||||||||||| | ||||||    
T  31022477 aagatacaattttcgtcagtgaaaacttatgaattaaggtaaatgcttatttatttgcataagttgtttttc 31022548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 39931554 - 39931475
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| | |||||||| || | ||||  ||||||||||| |||| |||||||||| ||||||    
T  39931554 gaagatacaattttcgttagtgagagcttataaaataaaataaaaacttatttatttacatatgctatttttcataagct 39931475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 47202901 - 47202980
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| | |||||||||| | ||||| ||||| ||||||  ||||| |||||||| ||||||    
T  47202901 gaagatacaattttcgttagtgagatcttataaattaaaataaaagcttacttatttatataagttatttttcataagct 47202980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 342
Target Start/End: Complemental strand, 42611963 - 42611799
Alignment:
Q  171 ttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagata 270  Q
    ||||||||||||| || |||||||||||||||||| |||| | |||||||||||| ||||  |       |||||||||| ||| ||  | | |||||||    
T  42611963 ttatgcaaaacaacttatgcaaataaataagcttt-atatgt-attattcataagcttgtcgag------tagtttatgaaaaaacaacttatgaagata 42611872  T
Q  271 caattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcat-aagctatttttcttaagct 342  Q
    || ||||| | ||||| ||||||| ||||| |||||| |||||||||||||||| || ||||||||| ||||||    
T  42611871 cagttttcgt-agtgacaacttatgaattaacataaaagcttatttatttgcataaatctatttttcataagct 42611799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 3564203 - 3564267
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgt 230  Q
    ||||||| ||||||||||||  || || |||||||||| ||||||||||||   ||||||||||||||    
T  3564203 ttttgagcttatgcaaaacagcttatgaaaataaataaacttttatatatt---attcataagtttgt 3564267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 10046312 - 10046373
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    ||||||||||| ||| ||||||| |||||||| ||||||| ||||| |||||| ||||||||    
T  10046312 atacaattttcgttattgaaaacatataaattaacataaaagcttaattatttacataagct 10046373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 22303171 - 22303236
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    |||||||||||||||||||||||||  ||||||||| | |||||  ||||| ||||| ||||||||    
T  22303171 gaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 22303236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 38876095 - 38876054
Alignment:
Q  300 acataaaggcttatttatttgcataagctatttttcttaagc 341  Q
    ||||||| | |||||||||||||||||||||||||| |||||    
T  38876095 acataaaagtttatttatttgcataagctatttttcataagc 38876054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 7206565 - 7206509
Alignment:
Q  287 aaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||  |||||  || |||||||||||||||||||||||| ||||||    
T  7206565 aaacttataaattaatataaaaactgatttatttgcataagctatttttcataagct 7206509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 7206708 - 7206636
Alignment:
Q  144 cccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatt 216  Q
    |||||||||||   || ||||||||| ||||||| ||||  || ||||||| ||||||||||||| |||||||    
T  7206708 cccgtttggattgagcttattttgagcttatgcagaacagcttatgcaaatgaataagcttttatttattatt 7206636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 9201699 - 9201648
Alignment:
Q  284 tgaaaacttataaat--tacataaaggcttatttatttgcataagctatttt 333  Q
    |||||||||||||||  ||||||||  |||||||||||||||||| ||||||    
T  9201699 tgaaaacttataaataatacataaaaacttatttatttgcataagttatttt 9201648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 342
Target Start/End: Original strand, 22117436 - 22117508
Alignment:
Q  271 caattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||| ||||| | |||||||| |||| | |||| |||||| ||||| ||||||||||||||| ||||||    
T  22117436 caattttcgttagtcagaacttatagattaaaataaaagcttatctatttacataagctatttttcataagct 22117508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 38515683 - 38515651
Alignment:
Q  310 ttatttatttgcataagctatttttcttaagct 342  Q
    |||||| ||||||||||||||||||||||||||    
T  38515683 ttatttttttgcataagctatttttcttaagct 38515651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 32213025 - 32212947
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagc 341  Q
    ||||| ||||||||||||||||| |||||||||| || |||||| |||||||||||||||||||||||||||| |||||    
T  32213025 gaagacacaattttcattagtgagaacttataaaataacataaaagcttatttatttgcataagctatttttcataagc 32212947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 25333711 - 25333639
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||||| |||||||||||||||    
T  25333711 gaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttacataagctatttttc 25333639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 35055498 - 35055576
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| | ||||| ||||| ||||| |||||||||||| ||||||||||||||| ||||||    
T  35055498 gaagatacaattttcgttagtgagagcttatgaattaaataaaagcttatttatttacataagctatttttcataagct 35055576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 37410946 - 37410844
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||||||| ||||||||||||||| ||||| | |||||||||||| | ||| |  ||||||||||| ||||||||||||||| |||    
T  37410946 tagtttatgaaaaaacagttcatgaagatacaattttcgttagtaagaacttataaattaaaatataaacttatttatttacataagctatttttcataa 37410847  T
Q  340 gct 342  Q
    |||    
T  37410846 gct 37410844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 188 - 342
Target Start/End: Complemental strand, 41145476 - 41145327
Alignment:
Q  188 tgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatc-agttcacgaagatacaattttcattagtga 286  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||       |||||||||| ||| | | || |  ||||||| ||||||||||||||    
T  41145476 tgcaaataaataagcttttatttattattattcataagtttgttaa-----ggtagtttatgaaaaaacaacttta--aagatacgattttcattagtga 41145384  T
Q  287 aaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     ||||||| |||| | ||| |  ||||||||||||||||| ||||||||| ||||||    
T  41145383 gaacttatgaattaatatataaacttatttatttgcataaactatttttcataagct 41145327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 333
Target Start/End: Complemental strand, 16972452 - 16972296
Alignment:
Q  171 ttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagata 270  Q
    ||||||||||||| |||||||||||||||||||| ||| |||||||   |||||||||||     ||   ||||| |||| ||| ||| | | |||||||    
T  16972452 ttatgcaaaacaatttttgcaaataaataagcttgtatgtattatt---cataagtttgtc----taaggtagttcatgaaaaaacagcttatgaagata 16972360  T
Q  271 caattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttt 333  Q
    |||||||| ||||||| ||||||| ||| |  ||||| | ||||||||||||||||||||||||    
T  16972359 caattttcgttagtgataacttatgaatcaatataaaagtttatttatttgcataagctatttt 16972296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 25465857 - 25465785
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||||  ||| ||||||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  25465857 gaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttc 25465785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 32131516 - 32131595
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||||| |||||| ||||||| ||||| |||||| |||||| ||||||||||| ||||||||| ||||||    
T  32131516 gaagatacaattttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataaactatttttcataagct 32131595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 12607132 - 12607234
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| | ||| | ||||||||||||| | ||||||| | ||||||||||| | |||| |||||||||||| ||||||||||||||| |||    
T  12607132 tagtttatgaaaaaacggtttatgaagatacaatttccgttagtgagagcttataaattaaaataaaagcttatttatttacataagctatttttcataa 12607231  T
Q  340 gct 342  Q
    |||    
T  12607232 gct 12607234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 16706001 - 16706071
Alignment:
Q  138 ttagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttat 208  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||  || |||||||||||| ||||||||    
T  16706001 ttagggcccgtttggattaggcttattttgagcttatgcaaaacagcttatgcaaataaatacgcttttat 16706071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 24087249 - 24087319
Alignment:
Q  266 agatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttc 335  Q
    |||||| |||||| ||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||    
T  24087249 agataccattttcgttaatgaaaacttataaattaaaataaaagcttatttatttgcataagctatttttc 24087319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 25671898 - 25671828
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||  | ||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||    
T  25671898 gaagatacaatt--cgttagtgaaaacttataaattaacataaaagcttatttatttacataagctatttttc 25671828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 9131138 - 9131059
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| |||||   ||||||| ||||| |||||| | |||||||||||||||||||||||||| ||||||    
T  9131138 gaagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagctatttttcataagct 9131059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 10213771 - 10213850
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||| ||||||||  ||||||| ||||||| ||||| |||| | |||||||||||||||||||||||||||| ||||||    
T  10213771 gaagaaacaatttttgttagtgagaacttatgaattaacatacaagcttatttatttgcataagctatttttcataagct 10213850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 32975763 - 32975842
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||  || |||| ||||||| |||||  ||||| |||||||||||||||||||||||||||| ||||||    
T  32975763 gaagatacaatttttgtttgtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagct 32975842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 34286574 - 34286495
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| |||| || ||||||| |||||  ||||| |||||||||||||||||| ||||||||| ||||||    
T  34286574 gaagatacaattttcgttagggagaacttatgaattaatataaaagcttatttatttgcataacctatttttcataagct 34286495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 34338393 - 34338322
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||||||| ||||| |||||||||| ||| ||||||| |||||||| ||||||||||||| ||||    
T  34338393 gaagatacaattttcgttagttaaaacttatagattaacataaaagcttatttttttgcataagctaatttt 34338322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 171 - 342
Target Start/End: Original strand, 19925548 - 19925712
Alignment:
Q  171 ttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagata 270  Q
    |||| |||||||  || ||||||||||||||||||||   ||||||||| |||||||||||||  || ||||      || ||| || || | |||||||    
T  19925548 ttatacaaaacagcttatgcaaataaataagctttta---attattatttataagtttgttaaggtattttac-----gaaaaaacaatttatgaagata 19925639  T
Q  271 caattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||| ||||||| | |||| |||||| | ||||  ||||||||||| ||||||||||||||| ||||||    
T  19925640 caattttcgttagtgagagcttacaaattaaaataaatacttatttatttacataagctatttttcataagct 19925712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 42102159 - 42102261
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| | ||| | ||||||||||||||| ||| ||| |  |||||||||| | |||| |||||||||||| ||||||||||||||| |||    
T  42102159 tagtttatgaaaaaaccgttaatgaagatacaattttcgttaatgagaggttataaattaaaataaaagcttatttatttacataagctatttttcataa 42102258  T
Q  340 gct 342  Q
    |||    
T  42102259 gct 42102261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 42363350 - 42363256
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctattttt 334  Q
    |||||||||| ||| | ||| | ||||||||||||||  ||||||| ||||| ||||||| | |||| |||||||||||| ||||||||||||||    
T  42363350 tagtttatgaaaaaaccgtttatgaagatacaatttttgttagtgagaacttttaaattaaaataaaagcttatttatttacataagctattttt 42363256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 13131421 - 13131477
Alignment:
Q  171 ttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgt 230  Q
    |||||||||||||||| ||||||||||||||||||||| ||||   ||||||||||||||    
T  13131421 ttatgcaaaacaaattatgcaaataaataagcttttatgtatt---attcataagtttgt 13131477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 11988272 - 11988351
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| | |||||||||| | ||||| || ||||||||| |||||| |||||||| ||||||    
T  11988272 gaagatacaattttcgttagtgagagcttataaattaaaataaaagcatatttatttacataagttatttttcataagct 11988351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 24350529 - 24350450
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| ||||||| ||||| | ||||||| ||||| ||||||  ||||||||||||||||||||| ||||| ||||||    
T  24350529 gaagatataattttcgttagtaagaacttatgaattaacataaaatcttatttatttgcataagctagttttcataagct 24350450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 28879155 - 28879210
Alignment:
Q  288 aacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  28879155 aacttatgaattaacataaaagcttatttatttgcataagctatttttcataagct 28879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 34102811 - 34102736
Alignment:
Q  142 ggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgc-aaataaataagcttttatatattatt 216  Q
    ||||||||||||| || | |||||||| ||||||||||| || || ||| |||||||||||||||||| |||||||    
T  34102811 ggcccgtttggattagacttattttgaatttatgcaaaataatttatgccaaataaataagcttttatgtattatt 34102736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 38338884 - 38338789
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    |||||||||| |||  |||| | |||||||  |||||| ||||||| |||||||||||| | |||||  ||||||||||| |||||||||||||||    
T  38338884 tagtttatgaaaaaatagtttatgaagatatgattttcgttagtgagaacttataaattaaaataaaaacttatttatttacataagctatttttc 38338789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 24866984 - 24866882
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | |||| |||||||||| |||  || |||||||||||||  |||||  |||||||||||||||||||| |||||| |||    
T  24866984 tagtttatgaaaaaacagcttatgaaggtacaattttcgttatcgagaacttataaattaagataaaaacttatttatttgcataagctctttttcataa 24866885  T
Q  340 gct 342  Q
    |||    
T  24866884 gct 24866882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 30974070 - 30974143
Alignment:
Q  269 tacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagc 341  Q
    |||||||||| ||||| | | ||||| ||||| |||||| ||||||||||||||||||||| |||||| |||||    
T  30974070 tacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataagc 30974143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 19327848 - 19327914
Alignment:
Q  161 tattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgt 230  Q
    |||||| || ||||||||||||| || ||||||||||||| ||||||| ||||   ||||||||||||||    
T  19327848 tatttttagcttatgcaaaacaacttatgcaaataaataaacttttatgtatt---attcataagtttgt 19327914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 342
Target Start/End: Complemental strand, 32924317 - 32924142
Alignment:
Q  161 tattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagtt 260  Q
    ||||||||| ||||||||||||  || ||| |||||||| ||||||||   || ||||| ||||| ||||| |     | |||||||||| ||| ||  |    
T  32924317 tattttgagcttatgcaaaacagcttatgcgaataaatatgcttttat---ttgttatttataagcttgttta-----tgtagtttatgaaaaaacaact 32924226  T
Q  261 cacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttattt--gcataagctatttttcttaagct 342  Q
     | ||||||| ||||||| ||||||||||||||| |||||  ||||| ||||||||||||  |||||||||||| ||| ||||||    
T  32924225 tatgaagataaaattttc-ttagtgaaaacttatgaattaatataaaagcttatttatttttgcataagctattcttcataagct 32924142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 38895735 - 38895814
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||| ||  |||||||||||||||||||| | |||||  |||||||||||| |||| ||| ||||| ||||||    
T  38895735 gaagatacaatatttgttagtgaaaacttataaattaatataaaaacttatttatttgtataaactaattttcataagct 38895814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 10298959 - 10298858
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||| | | ||||||||||||||  ||| ||| ||||||| ||||| |||||| ||| || ||||||||||||||||| ||| |||    
T  10298959 tagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaacttatgaattaacataaaagct-atctatttgcataagctattattcataa 10298861  T
Q  340 gct 342  Q
    |||    
T  10298860 gct 10298858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 13131556 - 13131598
Alignment:
Q  300 acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| ||||||||||||||||| |||||||||| ||||||    
T  13131556 acataaaagcttatttatttgcatatgctatttttcataagct 13131598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 342
Target Start/End: Complemental strand, 16706219 - 16706031
Alignment:
Q  147 gtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagttt 246  Q
    |||||||| |||  ||||||||| |||||||||||   || |||||||||||| | |||||| |||||||   ||||||||||  ||     | ||||||    
T  16706219 gtttggattaggtttattttgagcttatgcaaaacggcttatgcaaataaatatgtttttatgtattatt---cataagtttgaaaa-----tgtagttt 16706128  T
Q  247 atgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||| ||| ||    ||||| |||||| ||||||||  || || |||||||||| |||||| || |||||||||||||||||| |||| | ||||||    
T  16706127 atgaaaaaacaacatacgaatatacaactttcattaacgagaatttataaattaacataaaagcgtatttatttgcataagctgttttgcataagct 16706031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 26047083 - 26047005
Alignment:
Q  139 tagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattatta 217  Q
    |||| |||||||||||   || ||||||||| ||||| ||||||| || |||||| || ||||||||||| ||||||||    
T  26047083 taggtcccgtttggattgagcttattttgagcttatgtaaaacaacttatgcaaaaaagtaagcttttatttattatta 26047005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 29243103 - 29243152
Alignment:
Q  286 aaaacttataaat--tacataaaggcttatttatttgcataagctatttt 333  Q
    |||||||||||||  |||||||| ||||||||||||||||||||| ||||    
T  29243103 aaaacttataaataatacataaaagcttatttatttgcataagctgtttt 29243152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 42363356 - 42363405
Alignment:
Q  286 aaaacttataaat--tacataaaggcttatttatttgcataagctatttt 333  Q
    |||||||||||||  ||||||||  |||||||||||||||||||||||||    
T  42363356 aaaacttataaataatacataaaaacttatttatttgcataagctatttt 42363405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 9131027 - 9130962
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagct 328  Q
    ||||||||||||||| |||||   ||||||| ||||| |||||| | |||||||||||||||||||    
T  9131027 gaagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagct 9130962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 16926737 - 16926676
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataa 325  Q
    |||| ||||||| | ||||||| |||||||||||| |||||||  |||||||||||||||||    
T  16926737 aagaaacaatttccgttagtgagaacttataaattaacataaaaacttatttatttgcataa 16926676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 24087122 - 24087171
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatat 212  Q
    ||||||| |||||||||| || || |||||||||| ||||||||||||||    
T  24087122 ttttgagcttatgcaaaagaacttatgcaaataaagaagcttttatatat 24087171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 31079171 - 31079106
Alignment:
Q  269 tacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttt 333  Q
    ||||||||||  |||||||||||||| |||||  |||||  |||||||||||||||||||| ||||    
T  31079171 tacaattttcgatagtgaaaacttatgaattaagataaaaacttatttatttgcataagctctttt 31079106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 32131423 - 32131468
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttat 208  Q
    ||||||| ||||||||||||  || |||||||||||||||||||||    
T  32131423 ttttgagcttatgcaaaacagcttatgcaaataaataagcttttat 32131468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 34545621 - 34545552
Alignment:
Q  274 ttttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||| || ||||||||||||||||| ||||||  |||||||||||  ||||||| |||||| ||||||    
T  34545621 ttttcactaatgaaaacttataaattaacataaaaacttatttatttatataagctctttttcgtaagct 34545552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 328
Target Start/End: Complemental strand, 36907650 - 36907589
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagct 328  Q
    ||||||||||| ||||| | | ||||| ||||| |||||| |||||||||||||||||||||    
T  36907650 atacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagct 36907589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 42667076 - 42667145
Alignment:
Q  267 gatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||| || ||||| |||||||||||||| | ||||| | |||||||||| | |||||||||||||    
T  42667076 gatacaattctcgttagtaaaaacttataaattaaaataaaagtttatttatttacgtaagctatttttc 42667145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 29218261 - 29218189
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||| ||||||||||||||| |  ||||||||| | |||||  ||||| ||||| |||||||||||||||    
T  29218261 gaagatataattttcattagtgagagtttataaattaaaataaaaacttatgtatttacataagctatttttc 29218189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 163 - 342
Target Start/End: Original strand, 38372541 - 38372713
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttca 262  Q
    ||||||| ||||||||||||  || |||||||||||||||| |||| |||||||   ||||||||||| ||  |||||||      || ||| ||| |||    
T  38372541 ttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattatt---cataagtttgtcaaggtagtttac-----gaaaaagcagctca 38372632  T
Q  263 cgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     ||||| ||||||||| ||||||| ||||||| ||||| |||||| ||| |||||||||||| ||||||||||| ||||||    
T  38372633 agaagaaacaattttcgttagtgagaacttatgaattaacataaaagctgatttatttgcattagctatttttcataagct 38372713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 165 - 342
Target Start/End: Complemental strand, 44613574 - 44613404
Alignment:
Q  165 ttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacg 264  Q
    ||||| ||||||||||||  || |||||||||||||||||||||   |||||||||||||| |||||||  |||||||     ||| ||| ||  | | |    
T  44613574 ttgagcttatgcaaaacagcttatgcaaataaataagcttttat---ttattattcataagcttgttaaggtagttta-----tgaaaaaacaacttatg 44613483  T
Q  265 aagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    | ||||||||||| |||| | | ||||||| |||||  ||||| |||||||||||||||||||||||||||| ||||||    
T  44613482 acgatacaatttttattaattagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagct 44613404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 299
Target Start/End: Complemental strand, 23120048 - 23119895
Alignment:
Q  138 ttagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacata 237  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||  | ||||||||||||| |||   || | |||||||||||||||||| ||        
T  23120048 ttagggcccgtttggataaggcttattttgagcttatgcaaaacaacctatgcaaataaataatctt---taaagtattattcataagtttgtcaa---- 23119956  T
Q  238 gtttagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt 299  Q
     | ||||||| || | | |||||   ||||||||||||||  || |||||||||||||||||    
T  23119955 -tgtagtttaagaaataacagtttgtgaagatacaatttttgttcgtgaaaacttataaatt 23119895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 32848583 - 32848686
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttattta-tttgcataagctatttttctta 338  Q
    |||||||||||||| ||||||| ||| | ||||||||||||||| |||| ||||||||| |||||||  |||||||| |||||||||| |||||||| ||    
T  32848583 tagtttatgataaaacagttcatgaatacacaattttcattagttaaaatttataaattaacataaaaccttatttattttgcataagttatttttcata 32848682  T
Q  339 agct 342  Q
    ||||    
T  32848683 agct 32848686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 334
Target Start/End: Original strand, 34922926 - 34923080
Alignment:
Q  175 gcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagatacaat 274  Q
    ||||||||| || ||||||||||||||||||||| |||||||   ||||||||||| ||  |||||||   ||  | ||| ||| |   ||||||||| |    
T  34922926 gcaaaacaacttatgcaaataaataagcttttatgtattatt---cataagtttgtcaaggtagttta---taaaaaaaaacagcttgtgaagatacact 34923019  T
Q  275 tttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    |||| ||||||| ||||||| || || |||||| |||||||||||||||||||||||||||    
T  34923020 tttcgttagtgagaacttatgaactaacataaaagcttatttatttgcataagctattttt 34923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 300
Target Start/End: Complemental strand, 48021752 - 48021622
Alignment:
Q  161 tattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagtt 260  Q
    ||||||||| |||| |||||||| || |||||||||||||||| ||||   |||||||||||||| |||||||   ||  |||||||||| |||| |  |    
T  48021752 tattttgagcttatacaaaacaatttatgcaaataaataagctcttat---ttattattcataagcttgttaa---ag--tagtttatgaaaaat-aact 48021662  T
Q  261 cacgaagatacaattttcattagtgaaaacttataaatta 300  Q
     | ||||||||||||||||||||||||||||||| |||||    
T  48021661 aatgaagatacaattttcattagtgaaaacttatgaatta 48021622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 23137173 - 23137094
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||||||||||| | |||||||||| | ||||| ||||| |||||| ||||||||||||||| ||||||    
T  23137173 gaagatacaattttcattagtgagagcttataaattaaaataaaagcttacttatttacataagctatttttcataagct 23137094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 29378698 - 29378793
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    |||||||||| ||| ||| | | ||||||||||||||| ||||| | ||||||| ||||| | |||| ||||||||||||||||||||||||||||    
T  29378698 tagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaacttatgaattaacgtaaaagcttatttatttgcataagctatttttc 29378793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 16958868 - 16958970
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| | ||| | ||||||||||||||| ||||| ||| |||||||||| | ||||| |||||||||| | ||||||||||||||| |||    
T  16958868 tagtttatgaaaaaaccgtttatgaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataa 16958967  T
Q  340 gct 342  Q
    |||    
T  16958968 gct 16958970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 20888627 - 20888729
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| || || | ||||||||||||||| |  ||||||||||||||||| |||||||  |||| ||||||||||||| |||||||| |||    
T  20888627 tagtttatgaaaaaacaatttatgaagatacaattttcttccgtgaaaacttataaattaacataaaaacttacttatttgcataagttatttttcataa 20888726  T
Q  340 gct 342  Q
    |||    
T  20888727 gct 20888729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 22032815 - 22032917
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| || || | |||| |||||||||| ||||||| |||||||||||| | |||||  |||||||||||||||||||| |||||| |||    
T  22032815 tagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaacttataaattaagataaaaacttatttatttgcataagctttttttcataa 22032914  T
Q  340 gct 342  Q
    |||    
T  22032915 gct 22032917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 25908370 - 25908442
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||||| || ||||||| ||||||||| |||||||  ||||||||||||||||||| |||||||    
T  25908370 gaagatacaattttcgtttgtgaaaagttataaattaacataaaaacttatttatttgcataagccatttttc 25908442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 16932940 - 16932861
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||| ||| ||||||||||| | |||| |||||||||| | ||||||||||||||| ||||||    
T  16932940 gaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagct 16932861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 16938323 - 16938244
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||| ||| ||||||||||| | |||| |||||||||| | ||||||||||||||| ||||||    
T  16938323 gaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagct 16938244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 33288085 - 33288006
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||| ||||| ||||||||||||||| |||| |||||||  |||||||||||| |||||||| ||||| ||||||    
T  33288085 gaagatacagttttcgttagtgaaaacttatgaattaacataaaaacttatttatttggataagctagttttcataagct 33288006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 33204915 - 33204989
Alignment:
Q  269 tacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| || ||||||| ||||||| ||||| |||||| ||||||||||||||||||| |||||||| ||||||    
T  33204915 tacaattatcgttagtgagaacttatgaattaacataaaagcttatttatttgcataagatatttttcataagct 33204989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 39802980 - 39803050
Alignment:
Q  136 atttagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagctttt 206  Q
    |||||||| ||||||||||||||  |||||||| ||||||||||| ||||| || |||||||| |||||||    
T  39802980 atttagggtccgtttggataaggtttattttgaatttatgcaaaataaattatgaaaataaatgagctttt 39803050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 43818883 - 43818809
Alignment:
Q  269 tacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||||||| ||||||| |||||  |||||  |||||||||||||||||||| |||||| ||||||    
T  43818883 tacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataagctctttttcataagct 43818809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 47654447 - 47654345
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||||| | |||| |||||||||| ||||||| ||||||| |||||  |||||  |||||||||||||||||| | |||||| |||    
T  47654447 tagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataagatctttttcataa 47654348  T
Q  340 gct 342  Q
    |||    
T  47654347 gct 47654345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 14675993 - 14675900
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttt 333  Q
    |||||||||| ||| ||||| | |||||||||||||||||||| |||| |||||||||| | |||||  ||||||||||| | |||| ||||||    
T  14675993 tagtttatgaaaaaacagtttatgaagatacaattttcattagcgaaagcttataaattaaaataaaaacttatttatttacgtaagttatttt 14675900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 342
Target Start/End: Original strand, 39279484 - 39279585
Alignment:
Q  243 gtttatgataaatcagttcacgaagatacaattttcattagt-gaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaag 340  Q
    |||||||| ||||||| | | ||||||||||||||| ||| | || ||| ||| ||||| |||||| ||||||||||||| |||||||||||||| ||||    
T  39279484 gtttatgaaaaatcagcttaggaagatacaattttcgttaattgagaacctatgaattaacataaaagcttatttatttgtataagctatttttcataag 39279583  T
Q  341 ct 342  Q
    ||    
T  39279584 ct 39279585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 991575 - 991654
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||| ||||| ||||||| |  |||||||||| | |||| |||||||||||| ||||||||||||||| ||||||    
T  991575 gaagatacacttttcgttagtgagagtttataaattaaaataaaagcttatttatttacataagctatttttcataagct 991654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 14691309 - 14691230
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| ||||||| ||||||| ||||||| ||||| |||||| | |||||||||||||| | ||||||||| ||||||    
T  14691309 gaagatataattttcgttagtgagaacttatgaattaacataaaaggttatttatttgcatgaactatttttcataagct 14691230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 244 - 342
Target Start/End: Original strand, 22575642 - 22575741
Alignment:
Q  244 tttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| ||| ||||| | ||||||||||||||| ||||| | | |||||||||| | |||||  ||||||||| | ||||||||||||||| ||||||    
T  22575642 tttatgaaaaaacagtttatgaagatacaattttcgttagtaagagcttataaattaaaataaaaacttatttatctacataagctatttttcataagct 22575741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 29390561 - 29390482
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||  | || |||| ||||| |||||| |||||||||||||||||| ||||||||| ||||||    
T  29390561 gaagatacaattttcgttagctagaatttatgaattaacataaaagcttatttatttgcataaactatttttcataagct 29390482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 46744029 - 46744096
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctat 330  Q
    ||||||||||||||| ||||||| ||||||  ||||| |||||| |||||||||||| ||||||||||    
T  46744029 gaagatacaattttcgttagtgagaacttacgaattaacataaaagcttatttattttcataagctat 46744096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 12473164 - 12473253
Alignment:
Q  138 ttagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgt 230  Q
    |||||| || ||||||| |||  ||||||||| ||||||||||||| || |||||| ||||||| |||||| ||||   ||||||||||||||    
T  12473164 ttagggtccatttggattaggtttattttgagcttatgcaaaacaacttatgcaaacaaataagtttttatgtatt---attcataagtttgt 12473253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 342
Target Start/End: Original strand, 1312167 - 1312268
Alignment:
Q  242 agtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||||||| ||| | ||| | ||| ||||| ||||||||||||| |  |||||||||| | |||| | |||||||||| ||||||||||||||| ||||    
T  1312167 agtttatgaaaaaaccgtttatgaatatacacttttcattagtgagagtttataaattaaaataaaagtttatttatttacataagctatttttcataag 1312266  T
Q  341 ct 342  Q
    ||    
T  1312267 ct 1312268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 26331878 - 26331918
Alignment:
Q  300 acataaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  26331878 acataaaagcttatttatttgcataagctatttttcataag 26331918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 30181626 - 30181694
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatt 331  Q
    ||||||||  ||||||||||||  ||||||| ||||| |||||| |||||||||||||||||| |||||    
T  30181626 gaagatactgttttcattagtgggaacttatgaattaacataaaagcttatttatttgcataaactatt 30181694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 342
Target Start/End: Original strand, 35246748 - 35246824
Alignment:
Q  267 gatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||| |||||||   ||||||||||| | |||| |||||||||||| |||| |||||||||| ||||||    
T  35246748 gatacaattttcgttagtgagggcttataaattaaaataaaagcttatttatttacataggctatttttcataagct 35246824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 16012774 - 16012853
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||||||||||| |||| || |||    || ||||||||| ||||||||||||| ||||||    
T  16012774 gaagatacaattttcgttagtgaaaacttatgaattaacctaacaatttttttatttgcttaagctatttttcataagct 16012853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 19913998 - 19914093
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttc 335  Q
    |||||||||| ||| | ||| | ||||| | ||||||| ||||| ||| |||||| |||| | |||| |||||||||||| |||||||||||||||    
T  19913998 tagtttatgaaaaaacggtttatgaagagataattttcgttagtaaaagcttatatattaaaataaaagcttatttatttacataagctatttttc 19914093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 21249139 - 21249215
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagttta 242  Q
    ||||| ||||||||||||| | || |||||||||||||| |||||| ||||   ||||||||||||  ||| ||||||||    
T  21249139 ttttgcgtttatgcaaaactacttatgcaaataaataagtttttatgtatt---attcataagtttaataaaatagttta 21249215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 22319347 - 22319318
Alignment:
Q  213 tattattcataagtttgttaacatagttta 242  Q
    ||||||||||||||||||||||||||||||    
T  22319347 tattattcataagtttgttaacatagttta 22319318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 25907737 - 25907818
Alignment:
Q  138 ttagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattatt 219  Q
    ||||||| | |||||||||||| ||||||||| |||| |||||||  || || |||||||| || |||| | ||||||||||    
T  25907737 ttagggctcatttggataaggcttattttgagcttatacaaaacagcttatgtaaataaatgagtttttttgtattattatt 25907818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 28004685 - 28004730
Alignment:
Q  290 cttataaattaca-taaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||| | |||| |||||||||||||||||||||||||||    
T  28004685 cttataaattaaaataaaagcttatttatttgcataagctattttt 28004730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 342
Target Start/End: Complemental strand, 43635247 - 43635206
Alignment:
Q  301 cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||| ||||||||||||| |||| ||||||||||||||||    
T  43635247 cataaaagcttatttatttggataaactatttttcttaagct 43635206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 340
Target Start/End: Complemental strand, 44834989 - 44834916
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||||||||   ||| |||||||||||||||| ||| || | ||||||||||||||||| |||||||| ||||    
T  44834989 atacaatttttgctagcgaaaacttataaattaacattaaagtttatttatttgcataagttatttttcataag 44834916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 12473406 - 12473494
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagct 328  Q
    |||||||||| ||| ||||| |  |||| ||||||||| || |||| |||||||||||| | ||| | ||||||||||||| |||||||    
T  12473406 tagtttatgaaaaaacagtttataaagaaacaattttcgtttgtgagaacttataaattaatatataagcttatttatttgaataagct 12473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 17944535 - 17944563
Alignment:
Q  188 tgcaaataaataagcttttatatattatt 216  Q
    |||||||||||||||||||||||||||||    
T  17944535 tgcaaataaataagcttttatatattatt 17944563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 37465857 - 37465817
Alignment:
Q  302 ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||| |||||||||||||||||||||| ||||| ||||||    
T  37465857 ataaaagcttatttatttgcataagctaattttcataagct 37465817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 175 - 342
Target Start/End: Original strand, 24740 - 24902
Alignment:
Q  175 gcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagatacaat 274  Q
    ||||||||  || ||||||||||||||||||||| |||||||   |||||| |||| || |     |||||||||| ||| ||| | |  ||||||||||    
T  24740 gcaaaacagcttatgcaaataaataagcttttatgtattatt---cataagcttgtcaaaagg---tagtttatgaaaaaacagctaatcaagatacaat 24833  T
Q  275 tttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     ||||||||||| |||||||||||| |||||||  ||||||||||||||||||||| ||||| ||||||    
T  24834 attcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagct 24902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 24776 - 24733
Alignment:
Q  299 tacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||    
T  24776 tacataaaagcttatttatttgcataagctgttttgcttaagct 24733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 12817110 - 12817047
Alignment:
Q  272 aattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctattttt 334  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  12817110 aattttcattagtgaaaacatataaattaacataaaagcttatttatttgcataagctattttt 12817047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 32165294 - 32165192
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| ||||| | ||||||||||||||| ||||||| | |||||||||| | |||||  ||||||||||| ||||||||||||||| |||    
T  32165294 tagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagcttataaattaaaataaaaacttatttatttacataagctatttttcataa 32165195  T
Q  340 gct 342  Q
    |||    
T  32165194 gct 32165192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 342
Target Start/End: Original strand, 23239228 - 23239402
Alignment:
Q  161 tattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagtt 260  Q
    ||||||||| ||||| |||| || || | |||||||||||||||||||   |||||||||||||| |||||||| | |||||     | | ||| ||  |    
T  23239228 tattttgagcttatgaaaaataacttatacaaataaataagcttttat---ttattattcataagcttgttaacgtggttta-----tcaaaaagcaaat 23239319  T
Q  261 cacgaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
     | || ||||||| |||| ||||||| ||||||| |||||  ||||| |||||||||||||||||||||||||||| ||||||    
T  23239320 tatgacgatacaactttccttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagct 23239402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 6752888 - 6752967
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||||||||||||  | |||| |||||  ||||| |||||||||||||||||||||||||||| ||||||    
T  6752888 gaagatacaattttcattagtgaggatttatgaattaatataaaagcttatttatttgcataagctatttttcataagct 6752967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 8014864 - 8014943
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||  |||||||||||| ||||||| ||||||| ||||||| ||||||||| |||||||||| ||||||    
T  8014864 gaagatacaattttggttagtgaaaactgataaattaacataaaagcttattaatttgcatatgctatttttcataagct 8014943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 9202409 - 9202330
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||| |||||||||||  ||||||||||||||| ||||||    
T  9202409 gaagatacaatttttattagtgataacttatgaattaacataaaagcttatttattaacataagctatttttcataagct 9202330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 32675899 - 32675820
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||||||||||| ||||||| |||| | |||||  |||||||||||||||||| |||||||| ||||||    
T  32675899 gaagatacaattttcattagtgagaacttatgaattaatataaaaacttatttatttgcataagttatttttcataagct 32675820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 10874037 - 10874126
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagcta 329  Q
    |||||||||| ||| ||| | | ||||||||||||||  || |||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  10874037 tagtttatgagaaaacagcttatgaagatacaattttagttggtgaaaacttatgaattaacataaaagcttatttatttgcataagcta 10874126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 335
Target Start/End: Complemental strand, 29623578 - 29623416
Alignment:
Q  165 ttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacg 264  Q
    ||||| ||||||||||||| || ||||||||||||| |||||||   |||||||| || ||||||||||     | |||||||||| ||| ||  | | |    
T  29623578 ttgagcttatgcaaaacaacttatgcaaataaataaccttttat---ttattatttatgagtttgttaa-----tgtagtttatgaaaaaacaacttatg 29623487  T
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    || ||| | ||||| ||||||| ||||||| |||| |||||||  |||||||||||||||||||||||||||    
T  29623486 aaaataaagttttcgttagtgagaacttatgaattaacataaa-tcttatttatttgcataagctatttttc 29623416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 340
Target Start/End: Complemental strand, 9764400 - 9764324
Alignment:
Q  265 aagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaag 340  Q
    |||||||||||||| ||| |||| |||||||||||| |||||| ||||||||||||||||||  |||||||| ||||    
T  9764400 aagatacaattttcgttaatgaacacttataaattaacataaaagcttatttatttgcataaattatttttcataag 9764324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 335
Target Start/End: Original strand, 6758612 - 6758776
Alignment:
Q  165 ttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacg 264  Q
    ||||| ||||||||||||| || ||||||||||||||||||| |   ||||||| |||||| |||||||  |||||||     ||| |||| |  | |      
T  6758612 ttgagcttatgcaaaacaacttatgcaaataaataagcttttgt---ttattatccataagcttgttaaggtagttta-----tgaaaaattaacttatc 6758703  T
Q  265 aagatacaattttcattagtgaaaacttataaattac-ataaag-gcttatttatttgcataagctatttttc 335  Q
    ||||||||| |||| ||||||| ||||||| |||||  |||||  ||||||||||||||||||||||||||||    
T  6758704 aagatacaaatttcgttagtgagaacttatgaattaatataaaaagcttatttatttgcataagctatttttc 6758776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 6958700 - 6958770
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttt 333  Q
    ||||||||||||||| ||||||| || ||||||||||  ||||| |||||||||| |||||||||||||||    
T  6958700 gaagatacaattttctttagtgagaagttataaattagtataaaagcttatttatgtgcataagctatttt 6958770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 335
Target Start/End: Complemental strand, 2040287 - 2040119
Alignment:
Q  165 ttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacg 264  Q
    ||||| ||||||||||||| || |  ||||||||||||||||||   ||||||||||||||||||||||  || ||||       | ||| || || |      
T  2040287 ttgagcttatgcaaaacaacttatataaataaataagcttttat---ttattattcataagtttgttaaggtaatttatgaagaaaaaaaacaatttata 2040191  T
Q  265 aagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttc 335  Q
    ||| |||||||||||||||| | |||||||||||| | |||||  |||||||||||||||||| ||||||||    
T  2040190 aagttacaattttcattagttagaacttataaattaatataaaaacttatttatttgcataagttatttttc 2040119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 35071419 - 35071359
Alignment:
Q  283 gtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||| ||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  35071419 gtgagaacttatgaattaacataaaagcttatttatttgcataagctatttttcataagct 35071359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 6776884 - 6776963
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||| |||||||||||| |||| |||  |||  |||||  ||||||||||||||||||||||||||| ||||||    
T  6776884 gaagatacaaatttcattagtgagaactgatactttaatataaaaacttatttatttgcataagctatttttcataagct 6776963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 9201727 - 9201652
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||| | ||||||| ||||||| ||||| |||||| |||||||||||||||||||| ||||| | ||||||    
T  9201727 atacaatttccgttagtgagaacttatgaattaacataaaagcttatttatttgcataagcgattttccataagct 9201652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 10054457 - 10054520
Alignment:
Q  266 agatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagct 328  Q
    ||||||||||||||||||||  |||||| |||||| |||||| || ||||||||||||||||||    
T  10054457 agatacaattttcattagtgggaacttacaaattagcataaaagcctatttatttgcataagct 10054520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 8011050 - 8010976
Alignment:
Q  268 atacaattttcattagtgaaaacttataaattacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||| ||||| | | ||||| ||| ||||||| ||||| ||||||||||||||| |||||| ||||||    
T  8011050 atacaattttcgttagtaagatcttatgaataacataaaagcttaattatttgcataagctttttttcataagct 8010976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 10184363 - 10184261
Alignment:
Q  241 tagtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaa 339  Q
    |||||||||| ||| || || | ||||| ||||||||| ||||| | | ||||||||||| | |||| ||||||||||||  |||||||||||||| |||    
T  10184363 tagtttatgaaaaaacaatttatgaagaaacaattttcgttagtaagagcttataaattaaaataaaagcttatttatttatataagctatttttcataa 10184264  T
Q  340 gct 342  Q
    |||    
T  10184263 gct 10184261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 10755287 - 10755221
Alignment:
Q  270 acaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||| ||||| | ||||||| ||||| |||||| |||||||||||||||||| |||||||||    
T  10755287 acaattttcgttagtaagaacttatgaattaacataaaagcttatttatttgcataaactatttttc 10755221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 230
Target Start/End: Original strand, 30533950 - 30534027
Alignment:
Q  150 tggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgt 230  Q
    ||||| |||| ||||||||| || |||||||||  || ||||||||||||||||||||| ||||   ||||||||||||||    
T  30533950 tggattaggcttattttgagcttgtgcaaaacagcttatgcaaataaataagcttttatgtatt---attcataagtttgt 30534027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 342
Target Start/End: Complemental strand, 2027208 - 2027107
Alignment:
Q  242 agtttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||||||| ||| ||| | | |||||||||| |||  ||||| | ||||||| ||||| |||||| | |||| ||||||||||||||||||||| ||||    
T  2027208 agtttatgaaaaaacagcttatgaagatacaacttttgttagtaagaacttatgaattaacataaaagtttatctatttgcataagctatttttcataag 2027109  T
Q  341 ct 342  Q
    ||    
T  2027108 ct 2027107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 10687388 - 10687456
Alignment:
Q  266 agatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttt 333  Q
    ||||||||||||| |||| || ||||||| || | ||||||| |||||||||||||||||| |||||||    
T  10687388 agatacaattttcgttagcgagaacttatgaactgacataaaagcttatttatttgcataaactatttt 10687456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 12816908 - 12816832
Alignment:
Q  268 atacaattttcattagtgaaaactta-taaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||| |||||| ||||||| |||||| | ||||| |||||| |||||||||||||||||| ||||||||| ||||||    
T  12816908 ataccattttcgttagtgagaacttaatgaattaacataaaagcttatttatttgcataaactatttttcataagct 12816832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 10054351 - 10054394
Alignment:
Q  136 atttagggcccgtttggataaggcatattttgagtttatgcaaa 179  Q
    ||||||||||||||||||| |||| ||||||||| |||||||||    
T  10054351 atttagggcccgtttggatcaggcttattttgagcttatgcaaa 10054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 32615425 - 32615346
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||| ||||||| | | |||||||| | ||||| ||||| |||||| |||||| |||||||| ||||||    
T  32615425 gaagatacaattttcgttagtgagagcatataaattaaaataaaagcttacttatttacataagttatttttcataagct 32615346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 2034202 - 2034160
Alignment:
Q  300 acataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| ||||||||||||||||||||||||| || ||||||    
T  2034202 acataaaagcttatttatttgcataagctatttatcataagct 2034160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 3210975 - 3210929
Alignment:
Q  288 aacttataaatta-cataaaggcttatttatttgcataagctatttt 333  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  3210975 aacttatgaattaacataaaagcttatttatttgcataagctatttt 3210929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 9894856 - 9894930
Alignment:
Q  269 tacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||| ||| ||| | ||||||||||| | ||||  ||||||||||| ||||||||||||||| ||||||    
T  9894856 tacaattttcgttattgagagcttataaattaaaataaaaacttatttatttacataagctatttttcataagct 9894930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 10687290 - 10687352
Alignment:
Q  163 ttttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataag 225  Q
    ||||||| |||| |||||||  || |||||||||||||||||| || |||| |||||||||||    
T  10687290 ttttgagcttattcaaaacagcttatgcaaataaataagctttgatgtatttttattcataag 10687352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 21025192 - 21025158
Alignment:
Q  300 acataaaggcttatttatttgcataagctattttt 334  Q
    ||||||| |||||||||||||||||||||||||||    
T  21025192 acataaaagcttatttatttgcataagctattttt 21025158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 22708362 - 22708432
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttt 333  Q
    ||||||||||||||| ||||||  |  |||||||||| | ||||  |||||||||||||||||||||||||    
T  22708362 gaagatacaattttcgttagtgggagtttataaattaaaataaaaacttatttatttgcataagctatttt 22708432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 342
Target Start/End: Original strand, 29052389 - 29052487
Alignment:
Q  244 tttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaattacataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||| ||| ||||| | || ||||||||| || || |||| | ||||||||||| |  ||  ||||||||||| ||||||||||||||| ||||||    
T  29052389 tttatgaaaaaacagtttatgatgatacaattctcgtttgtgagagcttataaattaaaataaaacttatttatttacataagctatttttcataagct 29052487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 340
Target Start/End: Original strand, 1189459 - 1189536
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaag 340  Q
    ||||||||| ||||| ||||||| |  |||||||||| | | || |||||||||||| ||||||||||||||| ||||    
T  1189459 gaagatacacttttcgttagtgagagtttataaattaaaattaaagcttatttatttacataagctatttttcataag 1189536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 22816487 - 22816556
Alignment:
Q  139 tagggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttat 208  Q
    ||||| |||||||||| | || ||||||||| ||| ||||||||  || |||||||||||||| ||||||    
T  22816487 tagggaccgtttggattatgcttattttgagcttaagcaaaacagtttatgcaaataaataagtttttat 22816556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 2034270 - 2034313
Alignment:
Q  287 aaacttataaat--tacataaaggcttatttatttgcataagct 328  Q
    ||||||||||||  |||||||| |||||||||||||||||||||    
T  2034270 aaacttataaataatacataaaagcttatttatttgcataagct 2034313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 15054595 - 15054559
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaatta 300  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  15054595 gaagatacaattttcgttagttaaaacttataaatta 15054559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 335
Target Start/End: Original strand, 20776450 - 20776502
Alignment:
Q  284 tgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||| ||||||| |||||| | ||||||||||||||||| ||||||||    
T  20776450 tgaaaacttctaaattatcataaaagtttatttatttgcataagttatttttc 20776502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 34223535 - 34223455
Alignment:
Q  264 gaagatacaattttca-ttagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||||||   ||||||| | ||||||||||| | ||||  ||||||||||| ||||||||||||||| ||||||    
T  34223535 gaagatacaattttttgttagtgagagcttataaattaaaataaaaacttatttatttacataagctatttttcataagct 34223455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 326
Target Start/End: Complemental strand, 14822 - 14693
Alignment:
Q  190 caaataaataagcttttatatattattattcataagtttgttaacatagtttagtttatgataaatcagttcacgaagatacaattttcattagtgaaaa 289  Q
    ||||||||||||||||||| |||||||   ||||||||| | ||     | |||||||||| ||||||||| |  || ||||||||||| ||||||| ||    
T  14822 caaataaataagcttttatgtattatt---cataagtttttaaa-----tgtagtttatgaaaaatcagtttataaatatacaattttcgttagtgagaa 14731  T
Q  290 cttataaatt-acataaaggcttatttatttgcataag 326  Q
    |||||||||| |||| || |||||||||||||||||||    
T  14730 cttataaattaacatgaaagcttatttatttgcataag 14693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 14650 - 14714
Alignment:
Q  140 agggcccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttt 205  Q
    |||| |||||||||| |||| |||| |||| ||||||||||| | || ||||||||||||||||||    
T  14650 agggtccgtttggattaggcttattatgagcttatgcaaaac-acttatgcaaataaataagcttt 14714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 145 - 334
Target Start/End: Complemental strand, 58989 - 58807
Alignment:
Q  145 ccgtttggataaggcatattttgagtttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaacatagtttagt 244  Q
    ||||||| || |||| ||||||||| |||||||||| |  || || |||||||||| | ||||| ||||||| ||   |||||||| ||     | ||||    
T  58989 ccgtttgaattaggcttattttgagcttatgcaaaaaaccttgtggaaataaataaacgtttatgtattattctt---aagtttgtcaa-----tgtagt 58898  T
Q  245 ttatgataaatcagttcacgaagatacaattttcattagtgaaaacttataaatt-acataaaggcttatttatttgcataagctattttt 334  Q
    |||||| |||  | || | ||||||||||||| | ||||||||||||||||| || ||||||  || ||||||||||||||||||||||||    
T  58897 ttatgaaaaagtattttatgaagatacaatttccgttagtgaaaacttataatttaacataatagcatatttatttgcataagctattttt 58807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 59343 - 59422
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||| || |||| || ||||| ||||||||||| | ||||  ||||||||||| ||||||||||||||| ||||||    
T  59343 gaagatacgatattcactaatgaaagcttataaattaaaataaaaacttatttatttacataagctatttttcataagct 59422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 1134 - 1213
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattac-ataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    |||||||||| |||||||||||| ||||||||  |||  ||||| ||||||||||||||||||| |||||||| ||||||    
T  1134 gaagatacaaatttcattagtgagaacttatactttaatataaaagcttatttatttgcataagttatttttcataagct 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 1049 - 1108
Alignment:
Q  171 ttatgcaaaacaaattttgcaaataaataagcttttatatattattattcataagtttgttaa 233  Q
    |||| |||||||| || |||||||||||||||||||||   ||||||| |||||| |||||||    
T  1049 ttatacaaaacaacttatgcaaataaataagcttttat---ttattatccataagattgttaa 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 4144 - 4219
Alignment:
Q  268 atacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||||| ||||||  ||||||||||||| |||||| ||| ||| |||||||||||||||||||| ||||||    
T  4144 atacaattttcgttagtgggaacttataaattaacataaaagctcattgatttgcataagctatttttcataagct 4219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 342
Target Start/End: Complemental strand, 24401 - 24320
Alignment:
Q  262 acgaagatacaattttcattagtgaaaacttataaatta-cataaaggcttatttatttgcataagctatttttcttaagct 342  Q
    ||||||||| ||||||| ||||| ||||||| | ||||| |||||| || ||||||||||||||| ||| ||||| ||||||    
T  24401 acgaagatataattttcgttagtaaaaacttgtgaattatcataaaagcctatttatttgcataaactacttttcataagct 24320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 38463 - 38385
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttcttaagc 341  Q
    |||||| | |||||| |||| || | ||||||||||| | |||| |||||||||||| ||||||||||||||| |||||    
T  38463 gaagatgcgattttcgttagcgagagcttataaattaaaataaaagcttatttatttacataagctatttttcataagc 38385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 48614 - 48568
Alignment:
Q  288 aacttataaatta-cataaaggcttatttatttgcataagctatttt 333  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  48614 aacttatgaattaacataaaagcttatttatttgcataagctatttt 48568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 334
Target Start/End: Original strand, 2321 - 2398
Alignment:
Q  258 gttcacgaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctattttt 334  Q
    ||||| |||||||||||||||||||  || |  |||||||||| | ||||  ||||||||||| ||||||||||||||    
T  2321 gttcatgaagatacaattttcattaaggagagtttataaattaaaataaaatcttatttatttacataagctattttt 2398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 11395 - 11351
Alignment:
Q  171 ttatgcaaaacaaattttgcaaataaataagcttttatatattat 215  Q
    |||| |||||||| || ||||||||||||||||||||| ||||||    
T  11395 ttatacaaaacaacttatgcaaataaataagcttttatttattat 11351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 19631 - 19703
Alignment:
Q  264 gaagatacaattttcattagtgaaaacttataaattaca-taaaggcttatttatttgcataagctatttttc 335  Q
    ||||||||||||||  ||| ||||| ||||||| ||| | ||||  ||||||||||| |||||||||||||||    
T  19631 gaagatacaatttttgttaatgaaatcttataagttaaaataaaatcttatttatttacataagctatttttc 19703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 31308 - 31245
Alignment:
Q  145 ccgtttggataaggcatatttt--gagtttatgcaaaacaaattttgcaaataaataagctttt 206  Q
    |||||||||| |||| ||||||  ||| ||||| ||||||| || |||||||||||||||||||    
T  31308 ccgtttggattaggcttattttttgagcttatgtaaaacaacttatgcaaataaataagctttt 31245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University