View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6546_low_3 (Length: 517)

Name: NF6546_low_3
Description: NF6546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6546_low_3
NF6546_low_3
[»] chr2 (56 HSPs)
chr2 (184-499)||(12908419-12908730)
chr2 (13-185)||(12905273-12905446)
chr2 (184-333)||(45475374-45475523)
chr2 (184-332)||(19187213-19187361)
chr2 (184-265)||(34921749-34921830)
chr2 (193-280)||(28342510-28342597)
chr2 (189-335)||(2917615-2917761)
chr2 (193-270)||(3795334-3795411)
chr2 (193-271)||(24601635-24601713)
chr2 (193-271)||(24612401-24612479)
chr2 (189-270)||(35493336-35493417)
chr2 (190-266)||(43491110-43491186)
chr2 (219-270)||(12905546-12905597)
chr2 (214-269)||(36255733-36255788)
chr2 (193-267)||(25184829-25184902)
chr2 (184-270)||(41008918-41009003)
chr2 (193-267)||(43943689-43943763)
chr2 (219-291)||(45479819-45479891)
chr2 (193-280)||(9660054-9660141)
chr2 (191-270)||(34639311-34639390)
chr2 (213-291)||(1101071-1101149)
chr2 (193-235)||(7189950-7189992)
chr2 (201-271)||(34638137-34638206)
chr2 (194-268)||(45137433-45137507)
chr2 (214-291)||(1149448-1149525)
chr2 (213-270)||(38945759-38945816)
chr2 (193-245)||(43258732-43258784)
chr2 (214-317)||(1096545-1096648)
chr2 (215-270)||(3803564-3803619)
chr2 (193-271)||(17424127-17424206)
chr2 (193-232)||(30493394-30493433)
chr2 (193-264)||(35490683-35490754)
chr2 (214-280)||(2648785-2648851)
chr2 (213-263)||(16583588-16583638)
chr2 (217-271)||(20951069-20951123)
chr2 (189-279)||(23409496-23409586)
chr2 (193-239)||(28138608-28138654)
chr2 (194-271)||(29406968-29407045)
chr2 (193-270)||(29407886-29407963)
chr2 (193-243)||(31974246-31974296)
chr2 (193-235)||(33222648-33222690)
chr2 (193-267)||(42177213-42177287)
chr2 (193-235)||(43982231-43982273)
chr2 (193-234)||(7267443-7267484)
chr2 (214-331)||(19186683-19186800)
chr2 (193-234)||(22003400-22003441)
chr2 (193-270)||(27276373-27276450)
chr2 (193-234)||(28468674-28468715)
chr2 (197-234)||(39947632-39947669)
chr2 (193-270)||(41004526-41004602)
chr2 (193-270)||(41500233-41500310)
chr2 (191-235)||(2271734-2271778)
chr2 (197-245)||(28139559-28139607)
chr2 (221-265)||(36255019-36255063)
chr2 (214-306)||(41181398-41181490)
chr2 (193-233)||(43536136-43536176)
[»] chr5 (40 HSPs)
chr5 (184-306)||(18538325-18538447)
chr5 (193-280)||(18307241-18307328)
chr5 (196-262)||(42539375-42539441)
chr5 (193-303)||(33995147-33995257)
chr5 (193-291)||(34122500-34122598)
chr5 (193-291)||(34123934-34124032)
chr5 (193-306)||(20192314-20192427)
chr5 (225-306)||(35567058-35567139)
chr5 (190-258)||(25497520-25497588)
chr5 (184-280)||(4204201-4204295)
chr5 (189-270)||(25499882-25499963)
chr5 (184-263)||(30354386-30354465)
chr5 (214-333)||(34682191-34682310)
chr5 (184-270)||(33993277-33993363)
chr5 (193-270)||(35671079-35671156)
chr5 (193-270)||(542789-542866)
chr5 (198-291)||(1398580-1398673)
chr5 (193-270)||(17965846-17965923)
chr5 (197-270)||(17966889-17966962)
chr5 (193-242)||(40789206-40789255)
chr5 (189-306)||(41201689-41201806)
chr5 (194-306)||(20200148-20200260)
chr5 (193-271)||(8046-8125)
chr5 (214-317)||(39743168-39743271)
chr5 (189-306)||(3603143-3603260)
chr5 (194-270)||(28388519-28388595)
chr5 (194-234)||(37814615-37814655)
chr5 (193-303)||(8702197-8702307)
chr5 (193-271)||(30192488-30192566)
chr5 (214-280)||(4196569-4196634)
chr5 (184-270)||(7800977-7801063)
chr5 (193-235)||(19037469-19037511)
chr5 (193-235)||(25877653-25877695)
chr5 (193-291)||(25897078-25897176)
chr5 (193-291)||(41798794-41798892)
chr5 (203-271)||(2170564-2170632)
chr5 (213-270)||(13568094-13568151)
chr5 (193-234)||(13837757-13837798)
chr5 (214-335)||(24053112-24053233)
chr5 (193-234)||(28238172-28238213)
[»] chr3 (70 HSPs)
chr3 (184-306)||(28611090-28611212)
chr3 (184-334)||(29929359-29929509)
chr3 (184-334)||(29978513-29978663)
chr3 (183-306)||(52567724-52567847)
chr3 (201-303)||(46344901-46345003)
chr3 (193-270)||(41802995-41803072)
chr3 (183-305)||(19440218-19440340)
chr3 (189-270)||(2432938-2433019)
chr3 (191-271)||(14043895-14043975)
chr3 (194-291)||(49268845-49268942)
chr3 (193-270)||(55207662-55207739)
chr3 (217-280)||(19454348-19454411)
chr3 (193-272)||(41577070-41577149)
chr3 (192-267)||(42756159-42756234)
chr3 (184-306)||(29918331-29918453)
chr3 (184-306)||(29967484-29967606)
chr3 (193-274)||(32593111-32593192)
chr3 (193-270)||(2743395-2743472)
chr3 (193-270)||(24700718-24700795)
chr3 (189-306)||(41579719-41579836)
chr3 (189-297)||(43571680-43571788)
chr3 (193-271)||(2647698-2647777)
chr3 (197-280)||(46989534-46989617)
chr3 (189-311)||(7247855-7247977)
chr3 (193-291)||(34691601-34691699)
chr3 (193-235)||(43478829-43478871)
chr3 (193-270)||(45075343-45075420)
chr3 (196-270)||(48888738-48888811)
chr3 (199-317)||(49219796-49219914)
chr3 (193-270)||(9429848-9429925)
chr3 (195-280)||(11380428-11380513)
chr3 (193-270)||(19341593-19341670)
chr3 (192-265)||(30256001-30256074)
chr3 (214-267)||(34208617-34208670)
chr3 (214-291)||(41137694-41137771)
chr3 (193-270)||(45101847-45101924)
chr3 (193-290)||(49609360-49609457)
chr3 (194-266)||(9582548-9582620)
chr3 (214-270)||(13743290-13743346)
chr3 (193-280)||(16484455-16484542)
chr3 (194-270)||(30839160-30839236)
chr3 (214-270)||(41805695-41805751)
chr3 (193-271)||(7941106-7941184)
chr3 (191-274)||(11270281-11270364)
chr3 (189-271)||(19842500-19842582)
chr3 (214-265)||(46347741-46347791)
chr3 (191-270)||(48250866-48250945)
chr3 (193-235)||(6143703-6143745)
chr3 (193-235)||(10658855-10658897)
chr3 (193-235)||(34049112-34049154)
chr3 (193-243)||(35743581-35743631)
chr3 (193-235)||(43476224-43476266)
chr3 (193-235)||(54389827-54389869)
chr3 (193-270)||(4002504-4002581)
chr3 (217-270)||(7839522-7839575)
chr3 (193-270)||(7942005-7942081)
chr3 (193-234)||(30943222-30943263)
chr3 (193-270)||(34694433-34694510)
chr3 (193-234)||(41844363-41844404)
chr3 (193-234)||(42166409-42166450)
chr3 (193-234)||(46697744-46697785)
chr3 (193-234)||(50477213-50477254)
chr3 (193-250)||(51402397-51402454)
chr3 (193-270)||(52570565-52570642)
chr3 (191-235)||(2062418-2062462)
chr3 (193-233)||(20918010-20918050)
chr3 (193-233)||(20926972-20927012)
chr3 (193-245)||(44227134-44227186)
chr3 (195-267)||(49194953-49195025)
chr3 (214-262)||(49196469-49196517)
[»] chr1 (69 HSPs)
chr1 (189-335)||(41804028-41804174)
chr1 (184-333)||(13173770-13173918)
chr1 (189-306)||(46141743-46141860)
chr1 (198-302)||(25040080-25040184)
chr1 (191-270)||(6557912-6557991)
chr1 (189-305)||(18975115-18975231)
chr1 (184-335)||(46973136-46973286)
chr1 (184-261)||(7981129-7981206)
chr1 (191-267)||(44336249-44336325)
chr1 (193-271)||(29425335-29425413)
chr1 (194-280)||(52802117-52802203)
chr1 (194-255)||(36072381-36072442)
chr1 (218-335)||(36908510-36908627)
chr1 (227-335)||(35521546-35521654)
chr1 (184-243)||(8460087-8460146)
chr1 (184-247)||(19054240-19054303)
chr1 (184-334)||(19499102-19499250)
chr1 (184-262)||(21944370-21944448)
chr1 (193-266)||(41909704-41909777)
chr1 (193-270)||(6562160-6562237)
chr1 (191-280)||(13178129-13178218)
chr1 (189-250)||(26633544-26633605)
chr1 (184-333)||(36076548-36076696)
chr1 (193-270)||(44470010-44470087)
chr1 (189-305)||(6437534-6437650)
chr1 (214-270)||(30910023-30910079)
chr1 (193-245)||(46217317-46217369)
chr1 (193-271)||(13636121-13636200)
chr1 (191-270)||(29261411-29261490)
chr1 (193-267)||(3941149-3941223)
chr1 (193-235)||(26770552-26770594)
chr1 (193-267)||(45943725-45943799)
chr1 (184-317)||(9711641-9711774)
chr1 (193-270)||(15047279-15047356)
chr1 (193-234)||(20353934-20353975)
chr1 (192-269)||(27115821-27115898)
chr1 (183-280)||(49924843-49924940)
chr1 (191-280)||(50113294-50113383)
chr1 (217-261)||(14174908-14174952)
chr1 (214-274)||(29352252-29352312)
chr1 (193-245)||(29424402-29424454)
chr1 (218-270)||(30905768-30905820)
chr1 (193-280)||(44598905-44598992)
chr1 (193-245)||(46216420-46216472)
chr1 (218-270)||(49857873-49857925)
chr1 (194-270)||(51289960-51290036)
chr1 (193-271)||(19159618-19159697)
chr1 (183-270)||(29438009-29438096)
chr1 (224-291)||(29709341-29709407)
chr1 (193-235)||(9710610-9710652)
chr1 (184-270)||(22345258-22345343)
chr1 (193-267)||(46043506-46043580)
chr1 (193-234)||(3728768-3728809)
chr1 (193-234)||(3944007-3944048)
chr1 (193-234)||(3993842-3993883)
chr1 (219-268)||(4516030-4516079)
chr1 (193-234)||(8548668-8548709)
chr1 (193-266)||(11183187-11183260)
chr1 (193-273)||(19161886-19161966)
chr1 (213-270)||(20349454-20349511)
chr1 (193-270)||(23359348-23359425)
chr1 (214-271)||(24364745-24364802)
chr1 (197-234)||(38127493-38127530)
chr1 (213-270)||(41453835-41453892)
chr1 (193-270)||(48751409-48751486)
chr1 (193-270)||(49927512-49927589)
chr1 (193-234)||(50117845-50117886)
chr1 (196-260)||(6434755-6434819)
chr1 (193-277)||(35258871-35258955)
[»] chr8 (58 HSPs)
chr8 (183-270)||(41855365-41855452)
chr8 (193-291)||(42602436-42602534)
chr8 (189-306)||(18438595-18438712)
chr8 (217-333)||(3395826-3395942)
chr8 (194-270)||(42605234-42605310)
chr8 (193-268)||(5332585-5332660)
chr8 (192-267)||(28646245-28646320)
chr8 (192-267)||(28650829-28650904)
chr8 (184-270)||(18205783-18205869)
chr8 (184-270)||(22577662-22577748)
chr8 (193-291)||(35962283-35962381)
chr8 (193-270)||(1114740-1114817)
chr8 (191-334)||(7168021-7168164)
chr8 (193-335)||(18441440-18441582)
chr8 (193-267)||(21406267-21406341)
chr8 (193-267)||(21800759-21800833)
chr8 (193-303)||(34823015-34823125)
chr8 (196-306)||(38872932-38873042)
chr8 (196-271)||(35389504-35389579)
chr8 (193-270)||(7121785-7121862)
chr8 (198-271)||(13783112-13783185)
chr8 (193-239)||(16940275-16940321)
chr8 (193-267)||(21835178-21835252)
chr8 (201-267)||(38135616-38135682)
chr8 (193-235)||(43262453-43262495)
chr8 (214-270)||(1116208-1116264)
chr8 (219-335)||(4866367-4866482)
chr8 (214-270)||(20549252-20549308)
chr8 (193-277)||(28645363-28645447)
chr8 (193-277)||(28649947-28650031)
chr8 (193-272)||(36595945-36596024)
chr8 (190-234)||(41274625-41274669)
chr8 (195-271)||(45133274-45133350)
chr8 (62-114)||(45317564-45317616)
chr8 (193-271)||(22550864-22550942)
chr8 (193-271)||(40740902-40740980)
chr8 (193-235)||(2712434-2712476)
chr8 (194-244)||(32383205-32383255)
chr8 (194-244)||(32437160-32437210)
chr8 (193-235)||(34892808-34892850)
chr8 (192-250)||(35047175-35047233)
chr8 (193-235)||(40077249-40077291)
chr8 (193-235)||(41016446-41016488)
chr8 (216-270)||(41858143-41858197)
chr8 (193-270)||(43520775-43520852)
chr8 (216-270)||(45454403-45454457)
chr8 (193-234)||(184551-184592)
chr8 (191-236)||(4866805-4866850)
chr8 (193-234)||(8419437-8419478)
chr8 (193-234)||(26663032-26663073)
chr8 (193-234)||(32375684-32375725)
chr8 (212-273)||(33482757-33482818)
chr8 (213-270)||(41276879-41276936)
chr8 (214-266)||(7172607-7172659)
chr8 (193-265)||(26451482-26451554)
chr8 (214-270)||(32382697-32382753)
chr8 (214-270)||(32436652-32436708)
chr8 (191-235)||(35206657-35206701)
[»] chr7 (42 HSPs)
chr7 (191-306)||(10705209-10705324)
chr7 (184-306)||(47060888-47061009)
chr7 (193-271)||(37340298-37340376)
chr7 (193-335)||(9494805-9494947)
chr7 (214-306)||(36392086-36392178)
chr7 (194-306)||(46863344-46863456)
chr7 (54-117)||(35172073-35172136)
chr7 (193-270)||(30355238-30355315)
chr7 (193-250)||(41047794-41047851)
chr7 (193-317)||(47776282-47776406)
chr7 (201-271)||(41049196-41049266)
chr7 (213-291)||(45361625-45361703)
chr7 (213-270)||(618744-618801)
chr7 (193-234)||(17834520-17834561)
chr7 (193-242)||(19072462-19072511)
chr7 (193-270)||(42681991-42682068)
chr7 (225-306)||(46860472-46860553)
chr7 (191-267)||(40142658-40142734)
chr7 (215-270)||(27453615-27453670)
chr7 (215-270)||(34623401-34623456)
chr7 (184-227)||(36185842-36185885)
chr7 (191-234)||(42795110-42795153)
chr7 (194-245)||(48590339-48590390)
chr7 (193-235)||(9367723-9367765)
chr7 (193-235)||(13645341-13645383)
chr7 (193-266)||(14102347-14102420)
chr7 (193-266)||(14412364-14412437)
chr7 (193-243)||(15070379-15070429)
chr7 (193-235)||(17840889-17840931)
chr7 (193-235)||(19044325-19044367)
chr7 (193-235)||(20710269-20710311)
chr7 (198-268)||(29592542-29592612)
chr7 (194-271)||(38555413-38555490)
chr7 (193-243)||(40141438-40141488)
chr7 (193-235)||(42499441-42499483)
chr7 (193-234)||(18105406-18105447)
chr7 (217-266)||(21188423-21188472)
chr7 (193-234)||(35606822-35606863)
chr7 (193-234)||(45767860-45767901)
chr7 (214-270)||(5537869-5537925)
chr7 (214-265)||(33603202-33603254)
chr7 (198-250)||(46596902-46596954)
[»] chr6 (41 HSPs)
chr6 (184-270)||(16192766-16192852)
chr6 (191-334)||(23958823-23958966)
chr6 (193-270)||(13401483-13401560)
chr6 (193-270)||(13388707-13388784)
chr6 (197-306)||(2050990-2051098)
chr6 (189-270)||(13404627-13404708)
chr6 (193-270)||(31768750-31768827)
chr6 (222-306)||(23986009-23986093)
chr6 (193-271)||(22305103-22305182)
chr6 (184-267)||(31146373-31146456)
chr6 (193-267)||(8193208-8193282)
chr6 (193-306)||(12783956-12784069)
chr6 (193-245)||(9048097-9048149)
chr6 (193-245)||(9049083-9049135)
chr6 (193-280)||(29076322-29076409)
chr6 (193-280)||(29109855-29109942)
chr6 (193-280)||(29111295-29111382)
chr6 (193-245)||(32223512-32223564)
chr6 (223-334)||(13479659-13479770)
chr6 (193-235)||(6204859-6204901)
chr6 (193-235)||(11691826-11691868)
chr6 (191-245)||(17338761-17338815)
chr6 (193-243)||(26712072-26712122)
chr6 (197-267)||(28362734-28362804)
chr6 (194-279)||(29097828-29097913)
chr6 (193-235)||(31771740-31771782)
chr6 (196-270)||(32643523-32643597)
chr6 (193-234)||(13382662-13382703)
chr6 (183-260)||(13616247-13616324)
chr6 (191-244)||(15888797-15888850)
chr6 (193-234)||(17597523-17597564)
chr6 (213-270)||(18347038-18347095)
chr6 (194-239)||(18351643-18351688)
chr6 (191-236)||(24219603-24219648)
chr6 (214-271)||(25141099-25141156)
chr6 (193-234)||(28249918-28249959)
chr6 (199-247)||(8192362-8192410)
chr6 (199-267)||(17596941-17597009)
chr6 (214-270)||(18001211-18001266)
chr6 (191-235)||(18606076-18606120)
chr6 (214-270)||(29286226-29286282)
[»] scaffold0057 (1 HSPs)
scaffold0057 (187-263)||(23220-23296)
[»] scaffold0618 (1 HSPs)
scaffold0618 (201-303)||(3850-3951)
[»] scaffold0201 (1 HSPs)
scaffold0201 (193-270)||(22400-22477)
[»] chr4 (60 HSPs)
chr4 (189-306)||(49572895-49573012)
chr4 (189-306)||(51426498-51426615)
chr4 (193-333)||(958593-958732)
chr4 (219-335)||(4768610-4768726)
chr4 (189-303)||(955756-955870)
chr4 (196-267)||(9473663-9473734)
chr4 (213-291)||(1044538-1044616)
chr4 (184-270)||(11494541-11494626)
chr4 (193-335)||(44561329-44561471)
chr4 (193-270)||(9889991-9890068)
chr4 (193-270)||(15999798-15999875)
chr4 (213-270)||(21472503-21472560)
chr4 (189-270)||(37959715-37959796)
chr4 (193-273)||(48806479-48806559)
chr4 (191-267)||(17342142-17342218)
chr4 (194-301)||(33383771-33383878)
chr4 (193-270)||(4979916-4979993)
chr4 (193-270)||(15995719-15995796)
chr4 (193-270)||(19069184-19069261)
chr4 (191-267)||(17343399-17343475)
chr4 (184-303)||(21470867-21470986)
chr4 (189-265)||(34151616-34151692)
chr4 (193-268)||(41023385-41023460)
chr4 (193-247)||(55407792-55407847)
chr4 (213-271)||(3403843-3403901)
chr4 (194-244)||(19682111-19682161)
chr4 (213-271)||(37394244-37394302)
chr4 (193-291)||(56138223-56138326)
chr4 (193-270)||(1041932-1042009)
chr4 (213-270)||(17139622-17139678)
chr4 (193-270)||(18884503-18884580)
chr4 (194-334)||(29700302-29700442)
chr4 (217-250)||(37865185-37865218)
chr4 (192-247)||(48256566-48256622)
chr4 (200-263)||(24414839-24414902)
chr4 (193-271)||(55793915-55793994)
chr4 (194-236)||(4783677-4783719)
chr4 (193-235)||(6178109-6178151)
chr4 (198-280)||(6280844-6280926)
chr4 (214-268)||(18578648-18578702)
chr4 (193-235)||(21022887-21022929)
chr4 (196-234)||(26792246-26792284)
chr4 (193-267)||(34503709-34503783)
chr4 (196-234)||(37015931-37015969)
chr4 (197-270)||(48807389-48807462)
chr4 (193-235)||(49094116-49094158)
chr4 (72-117)||(4136751-4136796)
chr4 (224-265)||(24417446-24417487)
chr4 (193-234)||(30726740-30726781)
chr4 (193-234)||(31425317-31425358)
chr4 (217-270)||(34154425-34154478)
chr4 (193-234)||(37563279-37563320)
chr4 (194-235)||(39590568-39590609)
chr4 (193-234)||(39773437-39773478)
chr4 (193-234)||(40358279-40358320)
chr4 (214-270)||(49889680-49889736)
chr4 (193-234)||(54634014-54634055)
chr4 (191-235)||(20209324-20209368)
chr4 (191-235)||(38368260-38368304)
chr4 (61-117)||(44719369-44719425)
[»] scaffold0219 (2 HSPs)
scaffold0219 (216-266)||(15704-15754)
scaffold0219 (193-267)||(20111-20185)
[»] scaffold0494 (2 HSPs)
scaffold0494 (193-270)||(828-905)
scaffold0494 (193-234)||(5364-5405)
[»] scaffold0341 (1 HSPs)
scaffold0341 (193-270)||(17350-17427)
[»] scaffold0180 (1 HSPs)
scaffold0180 (191-234)||(15619-15662)
[»] scaffold0116 (1 HSPs)
scaffold0116 (193-279)||(15954-16040)
[»] scaffold0065 (1 HSPs)
scaffold0065 (193-271)||(65314-65392)
[»] scaffold0101 (1 HSPs)
scaffold0101 (193-271)||(36533-36612)
[»] scaffold0012 (2 HSPs)
scaffold0012 (215-270)||(232545-232600)
scaffold0012 (193-255)||(232831-232893)
[»] scaffold1500 (1 HSPs)
scaffold1500 (193-267)||(758-832)
[»] scaffold0360 (1 HSPs)
scaffold0360 (184-250)||(7294-7360)
[»] scaffold0019 (1 HSPs)
scaffold0019 (193-270)||(127498-127575)
[»] scaffold0744 (1 HSPs)
scaffold0744 (193-234)||(422-463)
[»] scaffold0260 (1 HSPs)
scaffold0260 (213-270)||(11777-11834)
[»] scaffold0143 (1 HSPs)
scaffold0143 (212-273)||(3858-3919)
[»] scaffold0038 (1 HSPs)
scaffold0038 (193-234)||(50080-50121)
[»] scaffold0388 (1 HSPs)
scaffold0388 (193-269)||(13908-13984)


Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 184 - 499
Target Start/End: Original strand, 12908419 - 12908730
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||| || |||||| ||||||||||||||||||||||||| ||| ||||||     
T  12908419 aacataattctcggcagttaactatcaaggttttcctcggcagttaactgcagccaatttttgaatttctcgacagttaactgccgaatgaggaaaattg 12908518  T
Q  284 tattttacatgtgtgcctcagccctatcatatgtcttaacagcaattttcttgtttgaaagtaaaactgaaatgaaatcaacataaataaatatataaac 383  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||     
T  12908519 tattttacatgtgtgcctcagccctatcatatgtttcaacagcaattttcttgtttgaaagtaaaactgaaatgaaatcaac----ataaatatataaat 12908614  T
Q  384 atattgcttaatgaggttcctttagtctcaaacaaatatttttggtggcctgcgacaaattggaatctaatttgcttttcataagttccattacttacaa 483  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12908615 atattgcttaatgaggttcctttagtctcaaacaaatatttttggtggcctgcgacaaattggaatctaatttgcttttcataagttccattacttacaa 12908714  T
Q  484 cgtgacaaagtccctt 499  Q
    ||||||||||||||||    
T  12908715 cgtgacaaagtccctt 12908730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 12905273 - 12905446
Alignment:
Q  13 aatataaagatatgtaagttggagaaagacatggnnnnnnn-atagaatattatgatgtcgtttgattcaagtagccgactctacttaatgagataaaac 111  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12905273 aatataaagatatgtaagttggagaaagacatggttttttttatagaatattatgatgtcgtttgattgaagtagccgactctacttaatgagataaaac 12905372  T
Q  112 ttggttttttgtgtgtttaaactcgatatccttcgcgtacataattgtggagactaattcctcaaacattgtaa 185  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  12905373 ttggttttttgtgtgtttaaactagatatccttcgtgtacataattgtggagactaattcctcgaacattgtaa 12905446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Complemental strand, 45475523 - 45475374
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||||||||||| ||||||||||| |  |||||||||||||||||||| | ||| ||||| ||||||||| ||||||||||||||  | |||||||      
T  45475523 aacataattctcggaagttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcg 45475424  T
Q  284 tattttacatgtgtgcctcagccctatcatatgtcttaacagcaattttc 333  Q
    |||||||| |||||| ||||||| ||| | |||| | |||| ||||||||    
T  45475423 tattttacttgtgtgtctcagccttatgaaatgtgtcaacatcaattttc 45475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 184 - 332
Target Start/End: Original strand, 19187213 - 19187361
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||| ||||||||||||||||||| |  ||||||||||||| |||||||||| |  |||| ||||||||| ||||||||||||||  | ||||||       
T  19187213 aacatatttctcggcagttaactaccgaggttttcctcggcaggtaactgcaactggattttgaatttctcggcagttaactgccgagggggcaaaaacg 19187312  T
Q  284 tattttacatgtgtgcctcagccctatcatatgtcttaacagcaatttt 332  Q
    |||||||| |||||| ||||||| ||| |||||||| |||| |||||||    
T  19187313 tattttacttgtgtgtctcagccttatgatatgtctgaacaacaatttt 19187361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 34921749 - 34921830
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaact 265  Q
    |||||||||||||||||||||||||| |  |||||||| ||||||||||||| ||| ||||| ||||||||| |||||||||    
T  34921749 aacataattctcggcagttaactaccgaggttttcctcagcagttaactgcagccggtttttgaatttctcggcagttaact 34921830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 193 - 280
Target Start/End: Complemental strand, 28342597 - 28342510
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||||||||||||||| | |||||||||||||||| |||| ||| ||||| ||||  ||||||||||||||||||| | ||||||    
T  28342597 ctcggcagttaactaccaagaatttcctcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaaggggcaaaa 28342510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 335
Target Start/End: Complemental strand, 2917761 - 2917615
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| ||| |||||||||||  |  |||||||||||||||||||| | ||| ||||| ||||||||| ||||||||||||||  | ||||||   |||||    
T  2917761 aattttcgacagttaactactgaggttttcctcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattt 2917662  T
Q  289 tacatgtgtgcctcagccctatcatatgtcttaacagcaattttctt 335  Q
    ||| | |||||||||||| ||| | |||| | |||| ||||||||||    
T  2917661 tacttttgtgcctcagccttatgaaatgtgtcaacaacaattttctt 2917615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 3795411 - 3795334
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| ||||  |||||||||||||||||||||| |||  ||| ||||| |||||||||||||||||||    
T  3795411 ctcggcagttaacttccaaggttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccga 3795334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 24601713 - 24601635
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| ||  ||||||||| ||||||||||| ||  |||||||||| |||||||||||||| |||||    
T  24601713 ctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccgaa 24601635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 24612401 - 24612479
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| ||  ||||||||| ||||||||||| ||  |||||||||| |||||||||||||| |||||    
T  24612401 ctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccgaa 24612479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 35493336 - 35493417
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||| |||||||||||||||| | ||||||||||||||||||||||| | | ||||| |||| |||| ||||||||| ||||    
T  35493336 aattttcggcagttaactaccgatattttcctcggcagttaactgcagctggtttttgaattcctcggcagttaactaccga 35493417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 43491186 - 43491110
Alignment:
Q  190 attctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactg 266  Q
    ||||||||||||||||||||||  ||||||||| ||||||| |||| ||| || ||||||| |||| ||||||||||    
T  43491186 attctcggcagttaactaccaaggttttcctcgacagttaattgcagccggttattaaattcctcggcagttaactg 43491110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 12905597 - 12905546
Alignment:
Q  219 ctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  12905597 ctcggcagttaactgcagccgatttttcaatttctcggcagttaactgccga 12905546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 36255733 - 36255788
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccg 269  Q
    ||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||    
T  36255733 ttttcctcggcagttaactgcaaccgtgtttttaattcctcgacagttaactgccg 36255788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 25184829 - 25184902
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||| |  |||||||||||||||||||||| |||  ||| ||||| ||||||||||||||||    
T  25184829 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccg-gtttcaaattcctcgacagttaactgc 25184902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 41008918 - 41009003
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||| |||| |||  ||  ||||| |||| ||||||||||||||    
T  41008918 aacatatttctcggcagttaactaccgaagttttcctcggcagttaaatgcagccg-gttacaaattcctcggcagttaactgccga 41009003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 43943763 - 43943689
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||| |  ||||||||| |||||||||||| ||| || ||||||| ||||| ||||||||||    
T  43943763 ctcggcagttaactaccgagtttttcctcgacagttaactgcagccggttattaaattcctcgagagttaactgc 43943689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 45479819 - 45479891
Alignment:
Q  219 ctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    ||||||| |||||| ||  |||||||| ||||||||| |||||||||||||| ||||||||||  ||||||||    
T  45479819 ctcggcaattaactacagtcgattttttaatttctcggcagttaactgccgagagagcaaaatcgtattttac 45479891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 9660054 - 9660141
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||| |||||||||||  |||||||||||||| ||||||| ||| || ||  ||| |||| |||||||||||||| || ||||||    
T  9660054 ctcggcaattaactaccaaggttttcctcggcagtcaactgcagccggttattgtattcctcggcagttaactgccgagagggcaaaa 9660141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 34639311 - 34639390
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||| || |  |||||||| ||||||||||||| |||  |||| ||||||||| |||||| |||||||    
T  34639311 ttctcggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatttctcggcagttacctgccga 34639390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 291
Target Start/End: Original strand, 1101071 - 1101149
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    |||||||||||||||||||| || |||  ||| |||||  ||| ||||||||||||||  ||||||||| |||||||||    
T  1101071 attttcctcggcagttaactacagccggatttcaaattcatcggcagttaactgccgagggagcaaaatcatattttac 1101149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 7189950 - 7189992
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  7189950 ctcggcagttaactaccgaagttttcctcggcagttaactgca 7189992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 34638206 - 34638137
Alignment:
Q  201 ttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||| || |||||||||||||||||||| |||||| |||  |||| |||| |||||||||||||||    
T  34638206 ttaactaccgaagttttcctcggcagttaactg-aaccgaatttctaattcctcggcagttaactgccgaa 34638137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 45137433 - 45137507
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgcc 268  Q
    |||||||||||||| | || ||||| |||||||||||||||| |||| |||| |||| |||| || |||||||||    
T  45137433 tcggcagttaactatcgaagttttcatcggcagttaactgcagccgaatttttaattcctcggcaattaactgcc 45137507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 1149525 - 1149448
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    ||||||||| ||||||||||||| ||  ||| ||||| |||| ||||||||||||||  |||||||||  ||||||||    
T  1149525 ttttcctcgacagttaactgcaatcggatttcaaattcctcggcagttaactgccgagggagcaaaatcgtattttac 1149448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 38945816 - 38945759
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  38945816 attttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 38945759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 43258732 - 43258784
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    |||||||||||||||||||| ||||| |||| ||||||||||| ||| |||||    
T  43258732 ctcggcagttaactaccaaagttttcttcggtagttaactgcagccggttttt 43258784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 1096648 - 1096545
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcat 313  Q
    |||||||||||||||||||||| |||  ||| ||||| |||| |||||||| |||||  | |||||||  ||||||||  ||||||| || || |||||     
T  1096648 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaacagccgagggggcaaaatcgtattttactagtgtgccacaaccttatcaa 1096549  T
Q  314 atgt 317  Q
    ||||    
T  1096548 atgt 1096545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 3803564 - 3803619
Alignment:
Q  215 tttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  3803564 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 3803619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 17424206 - 17424127
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| |  |||||||||||||||||||||| || ||||||  ||  | ||| |||||||||||||||    
T  17424206 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttccaaaatttcggcagttaactgccgaa 17424127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 30493433 - 30493394
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaact 232  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  30493433 ctcggcagttaactaccgagattttcctcggcagttaact 30493394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 35490754 - 35490683
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaac 264  Q
    |||||||||||||||||||  ||||| || ||||||||||||| ||| ||||| ||||  ||| ||||||||    
T  35490754 ctcggcagttaactaccaaggttttcttcagcagttaactgcagccggtttttgaattcttcggcagttaac 35490683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 2648851 - 2648785
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    |||||||||| ||||||||||| ||| ||||| |||| || | |||||||||||||| || ||||||    
T  2648851 ttttcctcggtagttaactgcagccggtttttgaattccttggcagttaactgccgagagggcaaaa 2648785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 16583588 - 16583638
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaa 263  Q
    ||||| ||||||||||||||||| |||| |||| |||| ||||||||||||    
T  16583588 atttttctcggcagttaactgcagccgaatttttaattcctcgacagttaa 16583638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 20951069 - 20951123
Alignment:
Q  217 tcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||||| |||  ||| ||||| |||| |||||||||||||||    
T  20951069 tcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaa 20951123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 23409496 - 23409586
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaa 279  Q
    |||| ||||||||| ||| || |  |||||||||||||||||||||| ||  ||||| |||| |||| || ||||||||||| || |||||    
T  23409496 aattttcggcagtttacttccgaggttttcctcggcagttaactgcagccagtttttgaattcctcggcaattaactgccgagagggcaaa 23409586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 28138654 - 28138608
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccg 239  Q
    |||||||||||||| || || ||||||||||||||||| ||||||||    
T  28138654 ctcggcagttaactgccgaagttttcctcggcagttaattgcaaccg 28138608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 29407045 - 29406968
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||| || || ||||||||||||||||| |||| ||| || |||||| || ||| |||||||||||||||    
T  29407045 tcggcagttaactgccgaagttttcctcggcagttaattgcagccggttctttaaaatt-tcggcagttaactgccgaa 29406968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 29407886 - 29407963
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| || || |||||||||  ||||||||||| ||| || |||||| || ||||||||||||||||||    
T  29407886 ctcggcagttaactgccgaagttttcctcgttagttaactgcagccggttctttaaaatt-tcgacagttaactgccga 29407963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 31974246 - 31974296
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattt 243  Q
    |||||||||||||| || | ||||||||||| ||||||||||| |||||||    
T  31974246 ctcggcagttaactgccgagattttcctcggtagttaactgcagccgattt 31974296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 33222690 - 33222648
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||| || || ||||||||||||||||||||||    
T  33222690 ctcggcagttaactgccgaagttttcctcggcagttaactgca 33222648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 42177213 - 42177287
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||| || ||||||| || ||||||| ||| ||| ||| | |||| |||| |||||||||||    
T  42177213 ctcggcagttaactaccgaagttttcctaggtagttaacagcagccggtttatgaattcctcggcagttaactgc 42177287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 43982273 - 43982231
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  43982273 ctcggcagttaactaccgaggttttcctcggcagttaactgca 43982231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 7267443 - 7267484
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| | |||||||| |||||||||||||    
T  7267443 ctcggcagttaactaccgagattttccttggcagttaactgc 7267484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 331
Target Start/End: Complemental strand, 19186800 - 19186683
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcat 313  Q
    |||||||  ||||||||||||| ||| ||||| |||| |||| ||||| ||||||||  | | ||||   |||||||| |||||| ||||||| ||| ||    
T  19186800 ttttccttagcagttaactgcagccgctttttgaattgctcggcagtttactgccgatggggtaaaaacgtattttacttgtgtgtctcagccttatgat 19186701  T
Q  314 atgtcttaacagcaattt 331  Q
    |||| | |||| ||||||    
T  19186700 atgtgtcaacaacaattt 19186683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 22003400 - 22003441
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  22003400 ctcggcagttaactaccgaggttttcctcggcagttaactgc 22003441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 27276373 - 27276450
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||| |||||| || |  |||||||||||||||||||||| |||  ||| ||||| |||  ||||||||||||||    
T  27276373 ctcggcaattaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagcagttaactgccga 27276450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 28468715 - 28468674
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  28468715 ctcggcagttaactaccgaggttttcctcggcagttaactgc 28468674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 39947669 - 39947632
Alignment:
Q  197 gcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||| || |||||||||||||||||||||    
T  39947669 gcagttaactaccgaagttttcctcggcagttaactgc 39947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 41004602 - 41004526
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| || ||||  |||||||||||||||| |||  ||  ||||| |||| ||||||||||||||    
T  41004602 ctcggcagttaactaccgaagtttttttcggcagttaactgcagccg-gttacaaattcctcggcagttaactgccga 41004526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 41500233 - 41500310
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  |||| ||||||||||||||||| |||  |||| ||||  | || |||||||||||||    
T  41500233 ctcggcagttaactaccgaggtttttctcggcagttaactgcagccggattttgaattctttgatagttaactgccga 41500310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 2271734 - 2271778
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||||| || || ||||||||| ||||||||||||    
T  2271734 ttctcggcagttaactgccgaagttttcctcgacagttaactgca 2271778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 28139559 - 28139607
Alignment:
Q  197 gcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    |||||||||| || || ||||||||||||||||| |||| |||||||||    
T  28139559 gcagttaactgccgaagttttcctcggcagttaaatgcagccgattttt 28139607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 36255063 - 36255019
Alignment:
Q  221 cggcagttaactgcaaccgatttttaaatttctcgacagttaact 265  Q
    ||||||||||||||| |||||||||||||| |||| || ||||||    
T  36255063 cggcagttaactgcagccgatttttaaattcctcggcaattaact 36255019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 41181490 - 41181398
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagcc 306  Q
    ||||||||||||||||| || | ||| || || |||| |||| ||||||||||||||  | ||||||   ||||||||  |||||||||||||    
T  41181490 ttttcctcggcagttaaatgtagccggttattgaattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagcc 41181398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 43536176 - 43536136
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactg 233  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  43536176 ctcggcagttaactaccgaggttttcctcggcagttaactg 43536136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 6e-32; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 18538325 - 18538447
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||| ||| ||||| |||| ||||||| |||||||||||  | |||||||      
T  18538325 aacataattctcggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcg 18538424  T
Q  284 tattttacatgtgtgcctcagcc 306  Q
    |||||||| ||||||||||||||    
T  18538425 tattttacttgtgtgcctcagcc 18538447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 193 - 280
Target Start/End: Complemental strand, 18307328 - 18307241
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||||||||||||| |  ||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||| ||||||||    
T  18307328 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttttaattcctcgacagttaactgccgaaggagcaaaa 18307241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 42539375 - 42539441
Alignment:
Q  196 ggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagtta 262  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| |||| ||||||||||||||||    
T  42539375 ggcagttaactaccaaagttttcctcggcagttaactgcagccgaatttttaatttctcgacagtta 42539441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 33995147 - 33995257
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttaca 292  Q
    |||||||||||||| || |  ||||||||||||||||| |||| ||||||||| ||||||||| |||||||||| |||  |   |||||| ||||||||     
T  33995147 ctcggcagttaactcccgaggttttcctcggcagttaattgcatccgatttttgaatttctcggcagttaactgtcgaggggataaaattgtattttact 33995246  T
Q  293 tgtgtgcctca 303  Q
    |||||||||||    
T  33995247 tgtgtgcctca 33995257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 34122598 - 34122500
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    ||||||||||||||||| |  |||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||| | |||||||  ||||||||    
T  34122598 ctcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtattttac 34122500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 34123934 - 34124032
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    ||||||||||||||||| |  ||||||| |||||||||||||| |||  ||| |||||||||||||||||||||||||  | |||||||  ||||||||    
T  34123934 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtattttac 34124032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 306
Target Start/End: Complemental strand, 20192427 - 20192314
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttaca 292  Q
    ||||||| ||||||| | || |||||||||||||||||||||| |||||| || ||||  ||  |||||||||| |||| | |||||||  ||||||||     
T  20192427 ctcggcatttaactatcgaagttttcctcggcagttaactgcagccgattattgaattcttcagcagttaactgacgaaggggcaaaatcgtattttact 20192328  T
Q  293 tgtgtgcctcagcc 306  Q
    ||||||||||||||    
T  20192327 tgtgtgcctcagcc 20192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 225 - 306
Target Start/End: Original strand, 35567058 - 35567139
Alignment:
Q  225 agttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagcc 306  Q
    ||||||||||||||| | || | ||| ||||||||||||||||||| |||||||||  ||||||||| ||||||||||||||    
T  35567058 agttaactgcaaccggtattaacattcctcgacagttaactgccgagagagcaaaaacatattttacttgtgtgcctcagcc 35567139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 25497588 - 25497520
Alignment:
Q  190 attctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgaca 258  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| || |||||| |||| |||||||    
T  25497588 attctcggcagttaactaccgagattttcctcggcagttaactgcagccaatttttgaattcctcgaca 25497520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 4204201 - 4204295
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    |||||| ||||||||||||||||||| |  ||||||||| |||||||||||| | |  ||| ||||||||||||||||||||| ||| || ||||||    
T  4204201 aacatatttctcggcagttaactaccgaggttttcctcgacagttaactgcagcgg--tttcaaatttctcgacagttaactgtcgagagggcaaaa 4204295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 25499882 - 25499963
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||| |||||| |||||||| ||  |||||||||||||||||| ||||||| ||||| |||| ||||| |||||||||||||    
T  25499882 aattttcggcacttaactactaaggttttcctcggcagttaaccgcaaccggtttttgaattcctcgatagttaactgccga 25499963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 30354386 - 30354465
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaa 263  Q
    |||||| |||||  |||||||||||| |  ||||||||| |||||||||||||||  ||||| |||||||||||||||||    
T  30354386 aacatatttctcaacagttaactaccgaggttttcctcgacagttaactgcaaccagtttttgaatttctcgacagttaa 30354465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 34682310 - 34682191
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcat 313  Q
    |||||||||||||||||||||| ||| ||||| |||| ||||||||||||||| | |  ||||||||   |||||||| ||||  |||||||| ||| |     
T  34682310 ttttcctcggcagttaactgcagccggtttttgaattcctcgacagttaactgtcaagggagcaaaagcgtattttacttgtgaacctcagccttatgaa 34682211  T
Q  314 atgtcttaacagcaattttc 333  Q
    |||| | |||| ||||||||    
T  34682210 atgtgtcaacaacaattttc 34682191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 33993363 - 33993277
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||||||||||| |  |||| | |||||||||||| || ||| ||||| ||||| ||| ||||||||| ||||    
T  33993363 aacataattctcggcagttaactaccgaggtttttcacggcagttaactacagccggtttttgaatttttcggcagttaacttccga 33993277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 35671156 - 35671079
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||| || |||||| || ||||||||||| ||||||    
T  35671156 ctcggcagttaactgccaaagttttcctcggcagttaactgcagccggttctttaaaatt-tcgacagttaattgccga 35671079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 542789 - 542866
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| | | ||||||||||||||| ||||| |||  |||  |||| |||||||||||||||||||    
T  542789 ctcggcagttaactaccgagagtttcctcggcagttagctgcagccggatttctaattcctcgacagttaactgccga 542866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 1398673 - 1398580
Alignment:
Q  198 cagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    |||||||||||| |  ||||||| ||| |||||||||||||| || || |||| |||| |||||||||| |||| |||||||| | ||||||||    
T  1398673 cagttaactaccgaggttttccttggctgttaactgcaaccggttattgaattcctcggcagttaactgtcgaaggagcaaaagtgtattttac 1398580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 17965923 - 17965846
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||| ||||||||| |  ||||||||||||||||||||||  ||| |||| |||| ||||||| |||||||||||    
T  17965923 ctcggcaattaactaccgatgttttcctcggcagttaactgcagtcgaatttttaattcctcgacaattaactgccga 17965846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 17966889 - 17966962
Alignment:
Q  197 gcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||| | ||||||||||| |||||||||||  ||  |||| ||||||||| ||||||||||||||    
T  17966889 gcagttaactaccgagattttcctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccga 17966962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 40789206 - 40789255
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt 242  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  40789206 ctcggcagttaactgctaaaattttcctcggcagttaactgcagccgatt 40789255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 41201806 - 41201689
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| ||| |||||||||||| |  |||||||||||||||||||||| ||| || || |||| ||||||| |||| || ||| ||  ||||||  |||||    
T  41201806 aattttcgacagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcgacaattaattgtcgagaggacaaaatcgtattt 41201707  T
Q  289 tacatgtgtgcctcagcc 306  Q
    |||  |||||||||||||    
T  41201706 tactcgtgtgcctcagcc 41201689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 20200148 - 20200260
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacat 293  Q
    |||||||||||||||  |  ||||||||||||||||||||||   | || || ||||||| ||||||||||||||||  | ||||||   |||||||  |    
T  20200148 tcggcagttaactacagatgttttcctcggcagttaactgcagttggttattgaatttcttgacagttaactgccgatggggcaaaaacgtattttattt 20200247  T
Q  294 gtgtgcctcagcc 306  Q
    |||||||||||||    
T  20200248 gtgtgcctcagcc 20200260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 8046 - 8125
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccg-atttttaaatttctcgacagttaactgccgaa 271  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||| |||| ||||| | ||| || ||| ||||||||    
T  8046 ctcggtagttaactaccgagattttcctcggcagttaactgcaaccgtatttctaaatatttcggcatttagctgccgaa 8125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 317
Target Start/End: Original strand, 39743168 - 39743271
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcat 313  Q
    ||||||||||||||||||||||  ||| ||| ||||| |||| |||||||||| |||  | ||||||| |||||||||  ||||| | ||||| |||||     
T  39743168 ttttcctcggcagttaactgcagtcgaatttcaaattcctcggcagttaactgtcgagggggcaaaatcatattttactagtgtggcacagccttatcaa 39743267  T
Q  314 atgt 317  Q
    ||||    
T  39743268 atgt 39743271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 3603143 - 3603260
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| |||||||||||||||| |  |||||||||| ||||||||||| ||  || || ||||  ||| |||||||||| |||  ||||||||   |||||    
T  3603143 aattttcggcagttaactaccgaggttttcctcggaagttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgtattt 3603242  T
Q  289 tacatgtgtgcctcagcc 306  Q
    ||| | ||||||||||||    
T  3603243 tacttatgtgcctcagcc 3603260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 28388519 - 28388595
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||| |  |||||||||||||||||||||| | |  ||| ||||| |||| ||| ||||||||||    
T  28388519 tcggcagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccga 28388595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 37814655 - 37814615
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  37814655 tcggcagttaactaccaaggttttcctcggcagttaactgc 37814615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 8702197 - 8702307
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca-accgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    |||| |||||||||||| |  |||||||| |||||||||||||  | ||||||| |||| |||| |||||||||| |||  |||||||||  ||||||||    
T  8702197 ctcgtcagttaactaccgaggttttcctcagcagttaactgcagtcagattttt-aattcctcggcagttaactgtcgagggagcaaaatcgtattttac 8702295  T
Q  292 atgtgtgcctca 303  Q
     ||||| |||||    
T  8702296 ttgtgtacctca 8702307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 30192566 - 30192488
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaa 271  Q
    |||||||||||||| || || ||||||||| |||||||||||| ||| || |||||| || ||| |||||||||||||||    
T  30192566 ctcggcagttaactgccgaagttttcctcgacagttaactgcagccggttctttaaaatt-tcggcagttaactgccgaa 30192488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 4196634 - 4196569
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||||||||||||| |||| |||| ||||||||| |||| || |||||| ||||| ||||||||    
T  4196634 ttttcctcggcagttaattgcagccga-ttttaaattcctcggcacttaactaccgaatgagcaaaa 4196569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 7800977 - 7801063
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||| | ||| ||||||||||||| |   ||||||||| | ||||||||| ||||||||| |||| | |||||||||||| ||||    
T  7800977 aacatattcctcagcagttaactaccgatgatttcctcggtaattaactgcagccgatttttgaattccacgacagttaactaccga 7801063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 19037469 - 19037511
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  19037469 ctcggcagttaactaccgaggttttcctcggcagttaactgca 19037511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 25877695 - 25877653
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| || ||||||||||||||||| ||||    
T  25877695 ctcggcagttaactaccgaagttttcctcggcagttaattgca 25877653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 25897078 - 25897176
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    ||||||||||||||||| |   |||||| |||||||||||||| |||   || ||||| ||||  |||||||||||||| | | ||||| |||||||||    
T  25897078 ctcggcagttaactaccgaggatttcctgggcagttaactgcagccggagttcaaattcctcggtagttaactgccgaaggggtaaaataatattttac 25897176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 41798892 - 41798794
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    |||||||| |||||||| |  ||||| |||||||||||||||| |||  ||| |||||  ||  ||||||||||||||  | ||||||| |||||||||    
T  41798892 ctcggcagataactaccgaggttttcttcggcagttaactgcagccggatttcaaattcttcagcagttaactgccgagggggcaaaatcatattttac 41798794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 2170564 - 2170632
Alignment:
Q  203 aactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaa 271  Q
    |||| |||||||||||||||||||||||||||| ||| || |||||| || |||| ||||||||| ||||    
T  2170564 aactgccaaaattttcctcggcagttaactgcagccggttctttaaaatt-tcgatagttaactgtcgaa 2170632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 13568094 - 13568151
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||||| |||  ||| ||||| |||| ||||||||| ||||    
T  13568094 attttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccga 13568151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 13837798 - 13837757
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  13837798 ctcggcagttaactaccgaggttttcctcggcagttaactgc 13837757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 335
Target Start/End: Complemental strand, 24053233 - 24053112
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcat 313  Q
    |||| |||||||||||||||||  || ||||| |||| |||| || ||||||||||| ||| |||||   |||||||  | |||| |||  || ||||||    
T  24053233 tttttctcggcagttaactgcagacggtttttgaattactcggcatttaactgccgagagaacaaaaacgtattttatttatgtgtctcgaccttatcat 24053134  T
Q  314 atgtcttaacagcaattttctt 335  Q
    |||| | |||| ||||||||||    
T  24053133 atgtgtcaacaacaattttctt 24053112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 28238213 - 28238172
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  28238213 ctcggcagttaactaccgaggttttcctcggcagttaactgc 28238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 6e-32; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 28611090 - 28611212
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    ||||||||||||||||||||||||||    |||||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||  | |||||||||    
T  28611090 aacataattctcggcagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaatta 28611189  T
Q  284 tattttacatgtgtgcctcagcc 306  Q
    |||||||| |||||| |||||||    
T  28611190 tattttacttgtgtgtctcagcc 28611212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 184 - 334
Target Start/End: Complemental strand, 29929509 - 29929359
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||| ||||||||||||||||| | |  ||||||||||||||||| |||| ||| ||||| |||| ||| ||||||||||| |||  ||||||||| |    
T  29929509 aacatatttctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatca 29929410  T
Q  284 tattttacatgtgtgcctcagccctatcatatgtcttaacagcaattttct 334  Q
    |||||||| |||||||||||||| ||| | |||| | |||| |||||||||    
T  29929409 tattttacttgtgtgcctcagccttataaaatgtgtcaacaacaattttct 29929359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 184 - 334
Target Start/End: Complemental strand, 29978663 - 29978513
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||| ||||||||||||||||| | |  ||||||||||||||||| |||| ||| ||||| |||| ||| ||||||||||| |||  ||||||||| |    
T  29978663 aacatatttctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatca 29978564  T
Q  284 tattttacatgtgtgcctcagccctatcatatgtcttaacagcaattttct 334  Q
    |||||||| |||||||||||||| ||| | |||| | |||| |||||||||    
T  29978563 tattttacttgtgtgcctcagccttataaaatgtgtcaacaacaattttct 29978513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 183 - 306
Target Start/End: Complemental strand, 52567847 - 52567724
Alignment:
Q  183 taacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatt 282  Q
    ||||||| ||||||||||||||||||| || |||| |||||||||||| |||| ||||||||| ||||  ||| |||||||||||||| |  |||||||     
T  52567847 taacatatttctcggcagttaactacctaagtttttctcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatc 52567748  T
Q  283 atattttacatgtgtgcctcagcc 306  Q
     ||||||||  |||||||||||||    
T  52567747 gtattttactcgtgtgcctcagcc 52567724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 46345003 - 46344901
Alignment:
Q  201 ttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcc 300  Q
    ||||||||| |  |||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  | ||||||  ||||||||| ||||||||    
T  46345003 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaaaatattttacttgtgtgcc 46344904  T
Q  301 tca 303  Q
    |||    
T  46344903 tca 46344901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 41803072 - 41802995
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  |||||||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||    
T  41803072 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttttaaattcttcggcagttaactgccga 41802995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 305
Target Start/End: Complemental strand, 19440340 - 19440218
Alignment:
Q  183 taacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatt 282  Q
    ||||||| || |||||||||||||||| |  |||||||||||||||||||||| ||| ||| | ||||  ||| ||||||||||||||    |||||| |    
T  19440340 taacatatttttcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccgaggaggcaaaagt 19440241  T
Q  283 atattttacatgtgtgcctcagc 305  Q
     ||||||||  ||||||||||||    
T  19440240 ttattttactcgtgtgcctcagc 19440218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 2432938 - 2433019
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||| ||||||||||||||||||  ||||||||| |||||||||| | ||| || || |||| |||||||||||||||||||    
T  2432938 aattttcggcagttaactaccaaggttttcctcgacagttaactgtatccggttattgaattcctcgacagttaactgccga 2433019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 14043895 - 14043975
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttt-taaatttctcgacagttaactgccgaa 271  Q
    |||||||||||||||| || || |||||||||||||||||||||| |||||||| ||||  | |||||||||||||||||||    
T  14043895 ttctcggcagttaactgccgaagttttcctcggcagttaactgcagccgattttctaaaact-tcgacagttaactgccgaa 14043975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 49268845 - 49268942
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||  |||| |||| ||| ||||||||| || ||| |  |||||| |||||||||    
T  49268845 tcggcagttaactaccgatgttttcctcggcagttaactgcaaccggatttttaattcctccacagttaacggctgaagggacaaaatcatattttac 49268942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 55207662 - 55207739
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||||  || |||| |||||||||||||||||| ||||| ||||  ||| ||||||||||||||    
T  55207662 ctcggcagttaactaccaaggttgtcctaggcagttaactgcaaccggtttttgaattcttcggcagttaactgccga 55207739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 19454348 - 19454411
Alignment:
Q  217 tcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||||||||||||||||||||||||| |||| |||  |||||||||||||| || ||||||    
T  19454348 tcctcggcagttaactgcaaccgatttttgaattcctcagcagttaactgccgagagggcaaaa 19454411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 41577149 - 41577070
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaa 272  Q
    |||||||||| |||||| || ||||  ||| |||||||||||||||||||||| ||||  |||||||||||||| |||||    
T  41577149 ctcggcagtttactaccgaagtttttgtcgacagttaactgcaaccgattttttaattcatcgacagttaactgtcgaaa 41577070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 42756234 - 42756159
Alignment:
Q  192 tctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    |||||||||||||||  | |  ||||||||||||||||||||||||||  |||| |||| ||||||||||||||||    
T  42756234 tctcggcagttaactctcgaggttttcctcggcagttaactgcaaccggatttttaattcctcgacagttaactgc 42756159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 29918331 - 29918453
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||| ||||||||||||||||| | |  |||||||||||||||||||||| ||| ||||  ||||  ||| ||||||| ||||||  |  ||||||      
T  29918331 aacatatttctcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcg 29918430  T
Q  284 tattttacatgtgtgcctcagcc 306  Q
    |||||||| | ||||||||||||    
T  29918431 tattttacttatgtgcctcagcc 29918453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 29967484 - 29967606
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||| ||||||||||||||||| | |  |||||||||||||||||||||| ||| ||||  ||||  ||| ||||||| ||||||  |  ||||||      
T  29967484 aacatatttctcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcg 29967583  T
Q  284 tattttacatgtgtgcctcagcc 306  Q
    |||||||| | ||||||||||||    
T  29967584 tattttacttatgtgcctcagcc 29967606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 32593111 - 32593192
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaaaga 274  Q
    ||||||||||||||| | || |||||||||| ||||||||||| ||| || |||||| || ||||||||||||||||||||||    
T  32593111 ctcggcagttaactatcgaagttttcctcggaagttaactgcagccggttctttaaaatt-tcgacagttaactgccgaaaga 32593192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 2743472 - 2743395
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| || |  |||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  2743472 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 2743395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 24700795 - 24700718
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |   ||||||||| |||||||||||||||  |||  |||| |||||||||||||||||||    
T  24700795 ctcggcagttaactaccgaggatttcctcgggagttaactgcaaccggatttctaattcctcgacagttaactgccga 24700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 41579719 - 41579836
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| |||||||||||||||| |  |||||||||||||||||||||| ||| || || |||| |||  || |||||||||||  | | |||||  |||||    
T  41579719 aattttcggcagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtattt 41579818  T
Q  289 tacatgtgtgcctcagcc 306  Q
    ||| | ||||||||||||    
T  41579819 tacttatgtgcctcagcc 41579836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 297
Target Start/End: Original strand, 43571680 - 43571788
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| ||||||||| |||| ||| |||||| | |||||||||||||| |||| |||| |||| |||  ||||||||||||||  | ||||||  ||||||    
T  43571680 aattttcggcagtttactatcaagattttcattggcagttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaacatattt 43571779  T
Q  289 tacatgtgt 297  Q
    ||| |||||    
T  43571780 tacttgtgt 43571788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 2647698 - 2647777
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| |  |||||||||||||||||||||| || ||||||| ||  | ||| |||||||||||||||    
T  2647698 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaa 2647777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 46989617 - 46989534
Alignment:
Q  197 gcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||||||||| |  |||||||||||||||||||||| |||   || ||||||||||  ||||||||||||| || ||||||    
T  46989617 gcagttaactaccgaggttttcctcggcagttaactgcagccggaattcaaatttctcggtagttaactgccgagagggcaaaa 46989534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 311
Target Start/End: Original strand, 7247855 - 7247977
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| ||| |||||||||||| |  ||||||||| |||||||||||| ||| || || |||| |||| ||||||||||||||  | ||||||   |||||    
T  7247855 aattttcgacagttaactaccgaggttttcctcgtcagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtattt 7247954  T
Q  289 tacatgtgtgcctcagccctatc 311  Q
    ||   ||||||||||||| ||||    
T  7247955 tattcgtgtgcctcagccttatc 7247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 34691699 - 34691601
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    ||||||||||||||||| |  ||||||||| |||||||||||| |||  |||| | || |||| ||||||||||||||    |||||||| ||||||||    
T  34691699 ctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactgccgaggaggcaaaattgtattttac 34691601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 43478829 - 43478871
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  43478829 ctcggcagttaactaccgaagttttcctcggcagttaactgca 43478871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 45075420 - 45075343
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| ||||| ||||||||||||||||||| || |||||| |||||| || ||| ||||||||| ||||    
T  45075420 ctcggcagttaactgccaaagttttcctcggcagttaactccagccgattctttaaaatt-tcggcagttaactaccga 45075343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 48888811 - 48888738
Alignment:
Q  196 ggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| | ||||||||||||||||||||||| |||  |||| |||| |||| ||| ||||||||||    
T  48888811 ggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcag-taactgccga 48888738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 317
Target Start/End: Original strand, 49219796 - 49219914
Alignment:
Q  199 agttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtg 298  Q
    |||||||||||||  |||||||||||||||||||||| |||  |||  |||| |||| ||||||||| ||||    |||||||| ||||||||  |||||    
T  49219796 agttaactaccaaggttttcctcggcagttaactgcagccggatttctaattcctcggcagttaactaccgaggaggcaaaattgtattttactagtgtg 49219895  T
Q  299 cctcagccctatcatatgt 317  Q
     | ||||| ||||| ||||    
T  49219896 gcacagccttatcaaatgt 49219914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 9429848 - 9429925
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  |||||||||| | ||||||||| || | ||| ||||| |||| ||||||||||||||    
T  9429848 ctcggcagttaactaccgaggttttcctcggtacttaactgcagccaaatttcaaattcctcggcagttaactgccga 9429925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 11380513 - 11380428
Alignment:
Q  195 cggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||| ||||||| |  || ||||||||||||||||||||||   |||| |||| |||| ||||||||||||||| | ||||||    
T  11380513 cggcagtaaactaccgaggttatcctcggcagttaactgcaaccatatttttaattcctcggcagttaactgccgaaggggcaaaa 11380428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 19341593 - 19341670
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| || || |||||||||| ||||||||||| |||  |||  |||| |||| ||||||||||||||    
T  19341593 ctcggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagttaactgccga 19341670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 30256001 - 30256074
Alignment:
Q  192 tctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaact 265  Q
    |||| ||||||||||| | |  |||||||||||||||||||||| ||| ||||| |||| |||| |||||||||    
T  30256001 tctcagcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaact 30256074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 34208670 - 34208617
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    |||||||||||||||||||||||  | |||||||||| ||||||| ||||||||    
T  34208670 ttttcctcggcagttaactgcaattggtttttaaattcctcgacaattaactgc 34208617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 41137771 - 41137694
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    |||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||| ||  ||||||||  |||||||||    
T  41137771 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgctgatggagcaaaaacatattttac 41137694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 45101847 - 45101924
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||     |||||||||||||||||| ||| ||||| |||| ||| ||| |||||||||||    
T  45101847 ctcggcagttaactaccaaagaaaacctcggcagttaactgcagccggtttttgaattcctcaacaattaactgccga 45101924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 49609457 - 49609360
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatatttta 290  Q
    ||||||||||||||||| |  |||| |||| || ||||||||  |||| ||| ||||| ||||||| ||||||  |||| |||||||||| |||||||    
T  49609457 ctcggcagttaactaccgaggtttttctcgacaattaactgcggccgaatttcaaattcctcgacaattaactatcgaaggagcaaaattgtatttta 49609360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 9582620 - 9582548
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactg 266  Q
    |||||||||||||  | || |||| |||||||||||||||||  || ||||| ||||||||| ||||||||||    
T  9582620 tcggcagttaactgacgaagtttttctcggcagttaactgcagtcggtttttgaatttctcggcagttaactg 9582548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 13743346 - 13743290
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  13743346 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 13743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 16484455 - 16484542
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    |||||||||||||| || || |||||||||||||||||||||| || ||||  |||| || ||||||| |||||||||| || ||||||    
T  16484455 ctcggcagttaactcccgaagttttcctcggcagttaactgcagccggattactaaaatt-tcgacaggtaactgccgagagggcaaaa 16484542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 30839160 - 30839236
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||| || |  ||||||| || ||||||||||| ||| |||| || | ||||||||||||||||||||    
T  30839160 tcggcagttaactgccgaggttttccttgggagttaactgcagccggttttgaactgtctcgacagttaactgccga 30839236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 41805695 - 41805751
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |||| ||| | ||||||||  ||||||||||||||||||    
T  41805695 ttttcctcggcagttaattgcagccggtctttaaattcttcgacagttaactgccga 41805751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 7941184 - 7941106
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaa 271  Q
    |||||||||||||| || || |||||||| ||||||||||||| ||| || |||||| || ||| |||||||||||||||    
T  7941184 ctcggcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatt-tcggcagttaactgccgaa 7941106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 11270281 - 11270364
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgat--ttttaaatttctcgacagttaactgccgaaaga 274  Q
    |||||||||||||||| || || ||||||| |||||||||||||| ||| |  |||||||||  ||| |||||||||| |||||||    
T  11270281 ttctcggcagttaactgccgaagttttccttggcagttaactgcagccggttcttttaaatt--tcggcagttaactgtcgaaaga 11270364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 19842582 - 19842500
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaa 271  Q
    ||||| ||||||||||||  | || |||||||| ||||||||||||| |||||| |||||| || ||| |||||||||||||||    
T  19842582 aattcccggcagttaactgtcgaagttttcctcagcagttaactgcagccgattctttaaaatt-tcggcagttaactgccgaa 19842500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 46347741 - 46347791
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaact 265  Q
    |||||||||||||||||||||| |||||| || ||||| |||||||||||||    
T  46347741 ttttcctcggcagttaactgcagccgattattgaattt-tcgacagttaact 46347791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 48250866 - 48250945
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||| || |  |||||||||||||||||||||| |||   || ||||| |||  ||||||||||||||    
T  48250866 ttctcggcagttaactcccgaggttttcctcggcagttaactgcagccggaattcaaattcctcagcagttaactgccga 48250945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 6143745 - 6143703
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||| || || ||||||||||||||||||||||    
T  6143745 ctcggcagttaactgccgaagttttcctcggcagttaactgca 6143703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 10658897 - 10658855
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||| ||||| |||||||||||||||| |||||    
T  10658897 ctcggcagttaactgccaaagttttcctcggcagttagctgca 10658855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 34049154 - 34049112
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  34049154 ctcggcagttaactaccgaggttttcctcggcagttaactgca 34049112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 35743581 - 35743631
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattt 243  Q
    ||||||||||||||||| |  |||||||||||||||||||||  |||||||    
T  35743581 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccgattt 35743631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 43476266 - 43476224
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  43476266 ctcggcagttaactaccgaggttttcctcggcagttaactgca 43476224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 54389869 - 54389827
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  54389869 ctcggcagttaactaccgaggttttcctcggcagttaactgca 54389827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 4002504 - 4002581
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| || |  |||||||||||||||||||||| |||  ||| ||||| |||   |||||||||||||    
T  4002504 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagtagttaactgccga 4002581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 7839522 - 7839575
Alignment:
Q  217 tcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||| ||||||||||| ||| ||||| |||| |||||||||| ||||||||    
T  7839522 tcctcggtagttaactgcagccggtttttgaattcctcgacagtttactgccga 7839575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 7942005 - 7942081
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||| |||||| || ||||||| |||||||||||||| |||||  | |||||| || ||| ||||||||||||||    
T  7942005 ctcggcatttaactgccgaaattttgctcggcagttaactacaaccattctttaaaatt-tcggcagttaactgccga 7942081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 30943263 - 30943222
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  30943263 ctcggcagttaactaccgaggttttcctcggcagttaactgc 30943222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 34694433 - 34694510
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| || |  |||| |||||||||| |||||| |||  |||  |||| |||||||||||||||||||    
T  34694433 ctcggcagttaactcccgaggtttttctcggcagtttactgcagccggatttctaattcctcgacagttaactgccga 34694510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 41844363 - 41844404
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  41844363 ctcggcagttaactaccgaggttttcctcggcagttaactgc 41844404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 42166409 - 42166450
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| || ||||||||||||||| |||||    
T  42166409 ctcggcagttaactaccgaagttttcctcggcagtttactgc 42166450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 46697785 - 46697744
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  46697785 ctcggcagttaactaccgaggttttcctcggcagttaactgc 46697744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 50477254 - 50477213
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  50477254 ctcggcagttaactaccgaggttttcctcggcagttaactgc 50477213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 51402397 - 51402454
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatt 250  Q
    ||||||||||||||||| |  ||||||||| ||||||||| ||| |||||||| ||||    
T  51402397 ctcggcagttaactaccgaggttttcctcgacagttaactacaatcgatttttgaatt 51402454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 52570565 - 52570642
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  |||| ||||| |||||||||||  || ||||| ||||  ||| ||||||||||||||    
T  52570565 ctcggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaattcttcggcagttaactgccga 52570642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 2062462 - 2062418
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||||| || || ||||||||| ||||||||||||    
T  2062462 ttctcggcagttaactgccgaagttttcctcgacagttaactgca 2062418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 20918010 - 20918050
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactg 233  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  20918010 ctcggcagttaactaccgaggttttcctcggcagttaactg 20918050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 20926972 - 20927012
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactg 233  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  20926972 ctcggcagttaactaccgaggttttcctcggcagttaactg 20927012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 44227186 - 44227134
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    ||||||||||||||||| |  ||||||||||||||||||| || |||| ||||    
T  44227186 ctcggcagttaactaccgaggttttcctcggcagttaactccagccgaatttt 44227134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 49195025 - 49194953
Alignment:
Q  195 cggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||| ||||||||||   |||||||||||| |||  |||| |||| |||  |||||||||||    
T  49195025 cggcagttaactaccgaaattttccttaacagttaactgcagccggctttttaattcctcagcagttaactgc 49194953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 49196469 - 49196517
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagtta 262  Q
    |||||||||| |||||||||||||||  |||| |||| |||||||||||    
T  49196469 ttttcctcggtagttaactgcaaccggatttttaattcctcgacagtta 49196517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 335
Target Start/End: Original strand, 41804028 - 41804174
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| ||| |||||||||||| |  ||||||||||||||||||||||  || ||||| |||| |||| ||||||||||||||| | ||||||   |||||    
T  41804028 aattttcgacagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattt 41804127  T
Q  289 tacatgtgtgcctcagccctatcatatgtcttaacagcaattttctt 335  Q
    ||| |||||||||||||| ||| | |||| | |||| ||||||||||    
T  41804128 tacttgtgtgcctcagccttataaaatgtgtcaacaacaattttctt 41804174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 184 - 333
Target Start/End: Complemental strand, 13173918 - 13173770
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    ||||||||||||||||||||||| ||||  ||||||||||| |||||||||| ||| ||||| || ||| |  ||||||||||||||  | |||||||      
T  13173918 aacataattctcggcagttaactgccaaggttttcctcggctgttaactgcagccggtttttgaa-ttcccagcagttaactgccgagggggcaaaatag 13173820  T
Q  284 tattttacatgtgtgcctcagccctatcatatgtcttaacagcaattttc 333  Q
    |||||||| |||||||||||||| ||| | |||| | |||| ||||||||    
T  13173819 tattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattttc 13173770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 46141860 - 46141743
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| |||||||||||||||| |  |||||||||||||||||||||| ||| || || |||| |||| |||||||||||||| || |||||||  |||||    
T  46141860 aattttcggcagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtattt 46141761  T
Q  289 tacatgtgtgcctcagcc 306  Q
    ||| ||||| ||||||||    
T  46141760 tacttgtgtacctcagcc 46141743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 198 - 302
Target Start/End: Original strand, 25040080 - 25040184
Alignment:
Q  198 cagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgt 297  Q
    ||||||||||||||  ||||||||| || ||||||| | ||| |||| |||||||||||||||||||||||||| |  ||||||| |||||||| |||||    
T  25040080 cagttaactaccaaggttttcctcgacaattaactgaagccggttttaaaatttctcgacagttaactgccgaagggacaaaattgtattttacttgtgt 25040179  T
Q  298 gcctc 302  Q
    |||||    
T  25040180 gcctc 25040184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 6557991 - 6557912
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| |||| ||| ||||| |||| ||||||||||||||    
T  6557991 ttctcggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccga 6557912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 18975115 - 18975231
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| |||||||||||||||| || |||||||| ||||||||||||||||  || ||||||| ||||||||||||| |||||  | ||||||   |||||    
T  18975115 aattttcggcagttaactaccgaagttttcctctgcagttaactgcaaccagttattaaattcctcgacagttaaccgccgagggggcaaaaacgtattt 18975214  T
Q  289 tacatgtgtgcctcagc 305  Q
    ||| ||||| |||||||    
T  18975215 tacttgtgtacctcagc 18975231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 335
Target Start/End: Complemental strand, 46973286 - 46973136
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    ||||||||||||||||||||||||  |   |||||||||||||||||||||| ||| ||||| |||| |||| |||||||||||| |  | |||||||      
T  46973286 aacataattctcggcagttaactatgagg-ttttcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcg 46973188  T
Q  284 tattttacatgtgtgcctcagccctatcatatgtcttaacagcaattttctt 335  Q
    |||||||| |||||| |||||||  || | |||| | |||| ||||||||||    
T  46973187 tattttacttgtgtgtctcagcctaatgaaatgtgtcaacaacaattttctt 46973136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 7981129 - 7981206
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagtt 261  Q
    ||||||||||||||| |||||||||| |  ||||||||||||||||| |||| ||||||||| ||||||||| |||||    
T  7981129 aacataattctcggcggttaactaccgaggttttcctcggcagttaattgcagccgattttttaatttctcggcagtt 7981206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 44336325 - 44336249
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||||| |  |||||||||||||||||||||| |||| |||  |||| ||||||||||||||||    
T  44336325 ttctcggcagttaactaccgaggttttcctcggcagttaactgcagccgaatttctaattcctcgacagttaactgc 44336249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 29425335 - 29425413
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||||||||  |    |||||||||||||||||||    
T  29425335 ctcggcagttaactaccgaagttttcctcggtagttaactgcaaccgattttttcaaacttcgacagttaactgccgaa 29425413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 52802203 - 52802117
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    |||||||||||||||| |  |||||||||||||||||||||| |||  ||| ||||| |||| |||||||||||||| || ||||||    
T  52802203 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagagggcaaaa 52802117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 36072442 - 36072381
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcg 255  Q
    |||||||||||||||| |  |||||||||||||||||||||| ||||||||| |||||||||    
T  36072442 tcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttcaatttctcg 36072381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 335
Target Start/End: Complemental strand, 36908627 - 36908510
Alignment:
Q  218 cctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcatatgt 317  Q
    |||||||||||||||||| ||| ||||| ||||  ||||||||||||||||||    |||||| | |||||||| ||||||||||| || ||| | ||||    
T  36908627 cctcggcagttaactgcagccggtttttgaattcttcgacagttaactgccgaggaggcaaaaatgtattttacttgtgtgcctcatccttataaaatgt 36908528  T
Q  318 cttaacagcaattttctt 335  Q
     | |||| ||||||||||    
T  36908527 gtcaacatcaattttctt 36908510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 35521654 - 35521546
Alignment:
Q  227 ttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcatatgtcttaacagc 326  Q
    ||||||||| ||| ||||| | || |||| |||||||||||||| || |||||||  |||||||| |||||||||||||| ||| | |||| | |||| |    
T  35521654 ttaactgcagccggttttttatttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctcagccttataaaatgtgtcaacaac 35521555  T
Q  327 aattttctt 335  Q
    |||||||||    
T  35521554 aattttctt 35521546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 8460087 - 8460146
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattt 243  Q
    |||||| ||||||||||||||||||| | |||||||| |||||||||||||| |||||||    
T  8460087 aacatatttctcggcagttaactaccgagattttccttggcagttaactgcagccgattt 8460146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 19054240 - 19054303
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaa 247  Q
    |||||| ||||||||||||||||||| |  ||||||| |||||||||||||| |||||||||||    
T  19054240 aacatatttctcggcagttaactaccgaggttttccttggcagttaactgcagccgatttttaa 19054303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 334
Target Start/End: Original strand, 19499102 - 19499250
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||| ||||| ||||||||| ||  |  |||||||||||||||||||||| |||| |||||||||||||  |||||||||| ||  || ||||||       
T  19499102 aacatatttctctgcagttaacgactgaggttttcctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcg--agggcaaaaacg 19499199  T
Q  284 tattttacatgtgtgcctcagccctatcatatgtcttaacagcaattttct 334  Q
    |||||||| |||||| ||||| | ||| ||||||   |||| |||||||||    
T  19499200 tattttacttgtgtgtctcagtcttatgatatgtgcgaacaacaattttct 19499250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 21944370 - 21944448
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagtta 262  Q
    |||||| ||||||| ||||||||| | |  ||||||||||||  |||||||| ||| ||||||||||||||||||||||    
T  21944370 aacatatttctcggtagttaactatcgaggttttcctcggcaactaactgcagccggtttttaaatttctcgacagtta 21944448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 41909704 - 41909777
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactg 266  Q
    |||||||||||||| || |||||||||||| |||||||||||| |||||| |||||| || ||||||||||||||    
T  41909704 ctcggcagttaactgccgaaattttcctcgccagttaactgcagccgattctttaaaatt-tcgacagttaactg 41909777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 6562160 - 6562237
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |   ||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  6562160 ctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 6562237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 13178129 - 13178218
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||||||||||||  | |  |||||||| ||||||||||||| | | ||||||||||||||  ||||||||||||||  ||||||||    
T  13178129 ttctcggcagttaactctcgaggttttcctcagcagttaactgcagctggtttttaaatttctcagcagttaactgccgagggagcaaaa 13178218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 26633605 - 26633544
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatt 250  Q
    |||| |||||||||||||||| |  |||||||||||||||||||||||||| ||||| ||||    
T  26633605 aattttcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaatt 26633544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 36076548 - 36076696
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    ||||||||||||||||||| |||| | |  |||||||||||||||||||||| ||| ||||| |||| ||||   ||||||| ||||| | | ||||       
T  36076548 aacataattctcggcagtttactagcgaggttttcctcggcagttaactgcagccggtttttgaattcctcggtggttaactaccgaaggggtaaaa-cg 36076646  T
Q  284 tattttacatgtgtgcctcagccctatcatatgtcttaacagcaattttc 333  Q
    |||||||| |||||  ||||||| ||| | |||| | |||||||||||||    
T  36076647 tattttacttgtgtttctcagccttatgaaatgtgtcaacagcaattttc 36076696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 44470010 - 44470087
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| || |  |||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  44470010 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 44470087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 6437534 - 6437650
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| ||||||| |||||||| |  ||||||| || |||||||||||  ||||| || | || |||| |||||||||||||| || ||||||   |||||    
T  6437534 aattttcggcagataactaccgaggttttccttggtagttaactgcagtcgattattgacttcctcggcagttaactgccgagagggcaaaagcgtattt 6437633  T
Q  289 tacatgtgtgcctcagc 305  Q
    ||| |||||||||||||    
T  6437634 tacttgtgtgcctcagc 6437650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 30910023 - 30910079
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||||||| |||  ||| ||||| |||||||||||||||||||    
T  30910023 ttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccga 30910079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 46217317 - 46217369
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    ||||||||||||||||| || |||||||||| ||||||||||| |||||||||    
T  46217317 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccgattttt 46217369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 13636121 - 13636200
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| |  |||||||||||||||||||||| || ||||||| ||  | ||| |||||||||||||||    
T  13636121 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaa 13636200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 29261490 - 29261411
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||| |||||||||||  |  ||||| ||||||||||| |||| ||||||||  |||||||| |||||||||||||||    
T  29261490 ttctcgacagttaactactgaggttttcttcggcagttaattgcagccgattttacaatttctctacagttaactgccga 29261411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 3941149 - 3941223
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||| || |||||||||| ||||||||||| ||  ||| | |||| |||| |||||||||||    
T  3941149 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccagtttatgaattcctcggcagttaactgc 3941223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 26770552 - 26770594
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||| |||||||||||||||| |||||||||||    
T  26770552 ctcggcagttaactgccaaaattttcctcggtagttaactgca 26770594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 45943725 - 45943799
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||| || |||||||||| |||||||| || ||| ||| | |||| ||||||| ||||||||    
T  45943725 ctcggcagttaactaccgaagttttcctcggtagttaactacagccggtttatgaattcctcgacaattaactgc 45943799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 9711641 - 9711774
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||| | |||||||||||||| || |  ||||||||||||||||||||| ||||  |||  |||| |||| ||||||||||| ||  | |||||||      
T  9711641 aacatattcctcggcagttaactcccgaggttttcctcggcagttaactgcgaccggatttctaattcctcggcagttaactgctgatggggcaaaatcg 9711740  T
Q  284 tattttacatgtgtgcctcagccctatcatatgt 317  Q
    ||||||||  ||||||| || || ||||| ||||    
T  9711741 tattttactagtgtgccacaaccttatcaaatgt 9711774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 15047356 - 15047279
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |    |||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  15047356 ctcggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 15047279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 20353934 - 20353975
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  20353934 ctcggcagttaactaccgaagttttcctcggcagttaactgc 20353975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 27115821 - 27115898
Alignment:
Q  192 tctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccg 269  Q
    |||||| ||||||||  | || ||||| |||||||||||||||| ||| |||||||||| |||| || ||||||||||    
T  27115821 tctcggtagttaactgacgaagttttcttcggcagttaactgcagccggtttttaaattcctcggcaattaactgccg 27115898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 49924940 - 49924843
Alignment:
Q  183 taacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||| || ||||||||||||| || |   ||||||||||||||||||| | ||| ||||| ||||| ||| ||||||| ||||||| | ||||||    
T  49924940 taacatatttttcggcagttaactcccgatgatttcctcggcagttaactgtagccggtttttgaatttttcggcagttaattgccgaaggggcaaaa 49924843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 191 - 280
Target Start/End: Complemental strand, 50113383 - 50113294
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||||||||||||||| | ||||||||||||| |||||| || ||||  || ||||| |||  || ||||||||| | |||||||||    
T  50113383 ttctcggcagttaactaccgagattttcctcggcaattaactacagccgaaattcaaattcctcaccaattaactgccaagagagcaaaa 50113294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 14174908 - 14174952
Alignment:
Q  217 tcctcggcagttaactgcaaccgatttttaaatttctcgacagtt 261  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  14174908 tcctcggcagttaactgcagccgatttttgaattcctcgacagtt 14174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 29352312 - 29352252
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaaga 274  Q
    |||||||||||||||||||| | |||  ||| ||||| ||||||| |||||||||||||||    
T  29352312 ttttcctcggcagttaactggagccggatttcaaattcctcgacaattaactgccgaaaga 29352252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 29424454 - 29424402
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    ||||||||||||||||| || |||||||||| ||||||||||| ||| |||||    
T  29424454 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttt 29424402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 30905820 - 30905768
Alignment:
Q  218 cctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||| |||  ||| |||||||||| ||||||||||||||    
T  30905820 cctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccga 30905768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 44598905 - 44598992
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    |||||||||||||| || || |||||||||||||||||||||| || ||||  |||| || ||||||| |||||||||| || ||||||    
T  44598905 ctcggcagttaactcccgaagttttcctcggcagttaactgcagccggattactaaaatt-tcgacaggtaactgccgagagggcaaaa 44598992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 46216472 - 46216420
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    ||||||||||||||||| || |||||||||  ||||||||||| |||||||||    
T  46216472 ctcggcagttaactaccgaagttttcctcgatagttaactgcagccgattttt 46216420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 49857873 - 49857925
Alignment:
Q  218 cctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||| | ||||||||||||  ||| ||||||||||||||    
T  49857873 cctcggcagttaactgcagctgatttttaaattcatcggcagttaactgccga 49857925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 51289960 - 51290036
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||| |||||||| |  ||||||||||||||||||||||||||  |||| |||| |||   |||||||||||||    
T  51289960 tcggcagctaactaccgaggttttcctcggcagttaactgcaaccggatttttaattcctcagtagttaactgccga 51290036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 19159697 - 19159618
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| |  ||||||| |||||||||||||| || ||||||| ||  | ||| |||||||||||||||    
T  19159697 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaa 19159618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 29438009 - 29438096
Alignment:
Q  183 taacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||| || ||||||||||| |||| |  |||||||||| ||||||||||| ||| ||||| ||| | ||  ||||||||||||||    
T  29438009 taacatatttttcggcagttaattaccgaggttttcctcggtagttaactgcagccggttttttaatatttctgcagttaactgccga 29438096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 29709341 - 29709407
Alignment:
Q  224 cagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    |||||||||||||| | ||||| ||||| || |||||||||||||||| |||||||| | ||||||||    
T  29709341 cagttaactgcaacag-tttttgaatttttcaacagttaactgccgaatgagcaaaaatgtattttac 29709407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 9710652 - 9710610
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||| || || ||||||||||||||||||||||    
T  9710652 ctcggcagttaactcccgaagttttcctcggcagttaactgca 9710610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 22345343 - 22345258
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||| ||||||||||||||||||| |   |||  |||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  22345343 aacatatttctcggcagttaactaccgaggattttttcggcagttaactgcagccg-gtttcaaattcctcggcagttaactgccga 22345258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 46043580 - 46043506
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||| || |||||||||| |||||| |||| || |||| | |||| ||||  ||||||||||    
T  46043580 ctcggcagttaactaccgaagttttcctcggtagttaattgcagccaatttatgaattcctcggtagttaactgc 46043506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 3728809 - 3728768
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  3728809 ctcggcagttaactaccgaggttttcctcggcagttaactgc 3728768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 3944048 - 3944007
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  3944048 ctcggcagttaactaccgaggttttcctcggcagttaactgc 3944007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 3993842 - 3993883
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  3993842 ctcggcagttaactaccgaggttttcctcggcagttaactgc 3993883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 4516079 - 4516030
Alignment:
Q  219 ctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgcc 268  Q
    ||||||||||||||||| ||| ||||| |||| |||| ||||||||||||    
T  4516079 ctcggcagttaactgcagccggtttttgaattcctcggcagttaactgcc 4516030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 8548668 - 8548709
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  8548668 ctcggcagttaactaccgaggttttcctcggcagttaactgc 8548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 11183260 - 11183187
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactg 266  Q
    |||| |||||||||||| |  |||||||||||||||||||||| |||  |||| |||| |||  ||||||||||    
T  11183260 ctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcagcagttaactg 11183187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 19161966 - 19161886
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaaag 273  Q
    |||||||||||||| || |  |||||||||||||||||||||| || ||||| ||||  | ||| |||||||||||||||||    
T  19161966 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttctaaaact-tcggcagttaactgccgaaag 19161886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 20349511 - 20349454
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||||| |||  ||| ||||| ||||  |||||||||||||    
T  20349511 attttcctcggcagttaactgcagccggatttcaaattcctcggtagttaactgccga 20349454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 23359348 - 23359425
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||| |||||| |  |||||||||| ||||||||||| |||  ||| ||||| |||| || |||||||||||    
T  23359348 ctcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccga 23359425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 24364745 - 24364802
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    |||||||| | |||||||||||||||||||| ||  | |||| |||||||||||||||    
T  24364745 ttttcctcagtagttaactgcaaccgattttaaacctcctcggcagttaactgccgaa 24364802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 38127530 - 38127493
Alignment:
Q  197 gcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||| || |||||||||||||||||||||    
T  38127530 gcagttaactaccgaagttttcctcggcagttaactgc 38127493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 41453892 - 41453835
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||||| |||  ||| ||||| |||| ||||||||| ||||    
T  41453892 attttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccga 41453835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 48751409 - 48751486
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  |||||||||||| ||||||||| |||  |||| |||| |||| ||||| | ||||||    
T  48751409 ctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttcagtgccga 48751486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 49927512 - 49927589
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||| |||||||||||| |  |||| ||||||||||||||  | ||| ||||||||||  ||| ||||||||||||||    
T  49927512 ctcgacagttaactaccgaggtttttctcggcagttaactatagccggtttttaaattcttcggcagttaactgccga 49927589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 50117845 - 50117886
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||| ||||||||| | ||||||||||||||||||||||    
T  50117845 ctcggcatttaactaccgagattttcctcggcagttaactgc 50117886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 6434819 - 6434755
Alignment:
Q  196 ggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagt 260  Q
    |||||||||||||| || |||||||  |||| |||||||| ||||||||| ||||  ||||||||    
T  6434819 ggcagttaactaccgaagttttccttagcagataactgcagccgattttttaattcatcgacagt 6434755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 35258871 - 35258955
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagca 277  Q
    ||||||||||||| | | |  ||||||||||  |||||||||| |||  |||| |||| |||| ||||||||||||||| |||||    
T  35258871 ctcggcagttaaccatcgaggttttcctcgggtgttaactgcagccggatttttaattcctcggcagttaactgccgaatgagca 35258955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 41855452 - 41855365
Alignment:
Q  183 taacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||| ||||||| ||||||||||| |  |||||||||||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  41855452 taacatatttctcggtagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcgacagttaactgccga 41855365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 42602534 - 42602436
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    ||||||||||||||||| |  |||||||||||||||||||||| ||| ||||| ||||  ||| |||||||||||||| ||| ||||| | ||||||||    
T  42602534 ctcggcagttaactaccgaggttttcctcggcagttaactgcatccggtttttgaattcttcggcagttaactgccgatagaacaaaaatgtattttac 42602436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 18438712 - 18438595
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| ||||||||||||| || |  |||||||||||||||||||||| ||| || || |||| ||| |||||||||||||||| | ||||||   |||||    
T  18438712 aattttcggcagttaactcccgaggttttcctcggcagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtattt 18438613  T
Q  289 tacatgtgtgcctcagcc 306  Q
    ||| ||||||| ||||||    
T  18438612 tacttgtgtgcatcagcc 18438595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 3395942 - 3395826
Alignment:
Q  217 tcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcatatg 316  Q
    |||||||||||||||||||| | ||||||||||| |||| ||||||||||| ||  | ||||||  ||||||||| ||||||||||| || ||| | |||    
T  3395942 tcctcggcagttaactgcaatcaatttttaaattcctcggcagttaactgctgagggggcaaaaacatattttacttgtgtgcctcaaccttatgaaatg 3395843  T
Q  317 tcttaacagcaattttc 333  Q
    | | || ||||||||||    
T  3395842 tgtcaagagcaattttc 3395826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 42605234 - 42605310
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||| |  ||||| |||||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  42605234 tcggcagttaactaccgatgttttcatcggcagttaactgcagccgatttttgaattcttcgacagttaactgccga 42605310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 5332585 - 5332660
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgcc 268  Q
    ||||| |||||||| || || |||||||||| | ||||||||| |||||||||||||||||||||| |||||||||    
T  5332585 ctcggtagttaactgccgaagttttcctcgggaattaactgcagccgatttttaaatttctcgacaattaactgcc 5332660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 28646245 - 28646320
Alignment:
Q  192 tctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    |||||| |||||||| || || |||||||||||||||||||||| |||||||||||||| |||| || ||||||||    
T  28646245 tctcggtagttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactgc 28646320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 28650829 - 28650904
Alignment:
Q  192 tctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    |||||| |||||||| || || |||||||||||||||||||||| |||||||||||||| |||| || ||||||||    
T  28650829 tctcggtagttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactgc 28650904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 18205869 - 18205783
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||||||||||| |  ||||||| |||||||||||||| ||| ||||| ||||  ||| |||||||| |||||    
T  18205869 aacataattctcggcagttaactaccgaggttttccttggcagttaactgcagccggtttttgaattcttcggcagttaaccgccga 18205783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 22577748 - 22577662
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||| ||||||||||||||||||| |  ||||||||| ||||||||||||||| |||||| |||| |||  || |||||||||||    
T  22577748 aacatacttctcggcagttaactaccgaggttttcctcgacagttaactgcaaccaatttttgaattcctcagcaattaactgccga 22577662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 35962381 - 35962283
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    |||||||||||||| || |  |||||||||||||||||||| | |||  ||| ||||| ||||||||||||||||||| || |||||||  ||||||||    
T  35962381 ctcggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccgagagggcaaaatcgtattttac 35962283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 1114817 - 1114740
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |   ||||||||||||||||||||| |||  ||| |||||||||| ||||||||||||||    
T  1114817 ctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccga 1114740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 334
Target Start/End: Complemental strand, 7168164 - 7168021
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatatttta 290  Q
    ||||||| ||| ||||||| |  |||||||||||||||||||||| ||| ||||| ||||  ||| ||| |||| | |||  | |||||||  |||||||    
T  7168164 ttctcggtagtcaactaccgaggttttcctcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtatttta 7168065  T
Q  291 catgtgtgcctcagccctatcatatgtcttaacagcaattttct 334  Q
    | |||||||||||||| ||| | |||| | |||| |||||||||    
T  7168064 cttgtgtgcctcagccttatgaaatgtgtcaacaacaattttct 7168021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 335
Target Start/End: Original strand, 18441440 - 18441582
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttaca 292  Q
    |||||||||||||| || |  |||| |||||||||||||| ||| || || || ||||||||| ||||||||||||||  | ||||||   ||||||||     
T  18441440 ctcggcagttaactgccgaggtttttctcggcagttaactacaatcggttattgaatttctcggcagttaactgccgagggggcaaaaacgtattttact 18441539  T
Q  293 tgtgtgcctcagccctatcatatgtcttaacagcaattttctt 335  Q
    |||||| ||||||| ||| | |||| | |||| ||||| ||||    
T  18441540 tgtgtgtctcagccttatgaaatgtgtcaacaacaattctctt 18441582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 21406341 - 21406267
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||| || |||||||||| ||||||||||| ||| ||| | |||| |||| |||||||||||    
T  21406341 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgc 21406267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 21800833 - 21800759
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||| || |||||||||| ||||||||||| ||| ||| | |||| |||| |||||||||||    
T  21800833 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgc 21800759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 34823015 - 34823125
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttaca 292  Q
    ||||||||||||||||| |  ||||||||| || ||||||||| |||  |||| |||| ||||||||||||||||||| ||  |||||   ||| ||||     
T  34823015 ctcggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcctcgacagttaactgccgagaggacaaaaacgtatattacg 34823114  T
Q  293 tgtgtgcctca 303  Q
    |||||||||||    
T  34823115 tgtgtgcctca 34823125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 306
Target Start/End: Original strand, 38872932 - 38873042
Alignment:
Q  196 ggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgt 295  Q
    ||||||||| |||| |  |||||||||||||||||||||| ||| |||||||||| ||||  ||||||||| |||  |  ||||| ||| |||||| |||    
T  38872932 ggcagttaattaccgaggttttcctcggcagttaactgcagccggtttttaaattcctcggtagttaactgacgaggggacaaaaatattttttacttgt 38873031  T
Q  296 gtgcctcagcc 306  Q
    |||| ||||||    
T  38873032 gtgcatcagcc 38873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 35389579 - 35389504
Alignment:
Q  196 ggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    |||| ||||| |||||  |||||||||||||||||||||| | | ||||| ||||||||| |||||||||| ||||    
T  35389579 ggcatttaacaaccaaggttttcctcggcagttaactgcagctggtttttgaatttctcggcagttaactgtcgaa 35389504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 7121785 - 7121862
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| || || |||||||| ||||||||||||| ||| || |||||| || ||||||||||||||||||    
T  7121785 ctcggcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatt-tcgacagttaactgccga 7121862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 13783112 - 13783185
Alignment:
Q  198 cagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||| || || |||||||||||||||||||||| ||| || |||||| || |||||||||||||||||||    
T  13783112 cagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatt-tcgacagttaactgccgaa 13783185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 16940275 - 16940321
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccg 239  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||    
T  16940275 ctcggcagttaactgccgaaattttcctcgacagttaactgcaaccg 16940321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 21835178 - 21835252
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    |||||||||||| |||| || |||||||||| ||||||||||| ||| ||| | |||| ||||||| ||||||||    
T  21835178 ctcggcagttaaataccgaagttttcctcggtagttaactgcagccggtttatgaattcctcgacatttaactgc 21835252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 38135616 - 38135682
Alignment:
Q  201 ttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    |||| |||| ||||||||||||| ||||||||||| ||| ||| |||||| |||| |||||||||||    
T  38135616 ttaattaccgaaattttcctcggtagttaactgcagccggtttataaattcctcggcagttaactgc 38135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 43262495 - 43262453
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  43262495 ctcggcagttaactaccgaagttttcctcggcagttaactgca 43262453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 1116208 - 1116264
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||| ||||||||||||||||| |||  ||| ||||| |||||||||||||||||||    
T  1116208 tttttctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccga 1116264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 4866482 - 4866367
Alignment:
Q  219 ctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcatatgtc 318  Q
    ||||| ||||||||||| ||| ||||| ||||||| ||||||||||||||||  || |||  |  ||||||||  ||||| ||||||| ||| ||||||     
T  4866482 ctcggtagttaactgcagccggtttttgaatttcttgacagttaactgccgaggga-caatttcgtattttactcgtgtgtctcagccttatgatatgtg 4866384  T
Q  319 ttaacagcaattttctt 335  Q
    | |||| ||||||||||    
T  4866383 tgaacaacaattttctt 4866367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 20549252 - 20549308
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||| ||||||||||| |||| ||| ||||| |||| ||||||||||||||    
T  20549252 ttttcctcggtagttaactgcagccgaatttcaaattcctcggcagttaactgccga 20549308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 28645447 - 28645363
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagca 277  Q
    |||||||||||||  || || |||| |||| || |||||||||||||  |||| |||| |||| ||||||||||||| |||||||    
T  28645447 ctcggcagttaacggccgaagtttttctcgacaattaactgcaaccgtgtttttaattcctcggcagttaactgccgcaagagca 28645363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 28650031 - 28649947
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagca 277  Q
    |||||||||||||  || || |||| |||| || |||||||||||||  |||| |||| |||| ||||||||||||| |||||||    
T  28650031 ctcggcagttaacggccgaagtttttctcgacaattaactgcaaccgtgtttttaattcctcggcagttaactgccgcaagagca 28649947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 272
Target Start/End: Original strand, 36595945 - 36596024
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaaa 272  Q
    |||||||||||||| |  || |||||||||||||||||||||| ||| || |||||| || |||||| |||||||||||||    
T  36595945 ctcggcagttaactgcttaagttttcctcggcagttaactgcagccggttctttaaaatt-tcgacaattaactgccgaaa 36596024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 41274669 - 41274625
Alignment:
Q  190 attctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||    
T  41274669 attctcggcagttaactaccgagattttcctcggcaattaactgc 41274625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 45133274 - 45133350
Alignment:
Q  195 cggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||| ||| || |||||||||| ||||||||||| |||||||     || ||||||||||||||||||||    
T  45133274 cggcagttaacaaccgaagttttcctcggtagttaactgcagccgatttcatttttcctcgacagttaactgccgaa 45133350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 45317564 - 45317616
Alignment:
Q  62 ttatgatgtcgtttgattcaagtagccgactctacttaatgagataaaacttg 114  Q
    ||||||||| ||||||| || ||||||||||||| ||| ||||||||||||||    
T  45317564 ttatgatgttgtttgatccatgtagccgactctaattagtgagataaaacttg 45317616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 22550864 - 22550942
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| |  |||||||||||||||||||||| || ||||| ||||  | ||| |||||||||||||||    
T  22550864 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaact-tcggcagttaactgccgaa 22550942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 40740980 - 40740902
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaa 271  Q
    |||||||||||||| || || |||||||||||||||||||||| ||| || |||||| || ||| |||||||||| ||||    
T  40740980 ctcggcagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatt-tcggcagttaactgtcgaa 40740902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 2712476 - 2712434
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||| || ||||||||||||| |||||||||||    
T  2712476 ctcggcagttaactgccgaaattttcctcggtagttaactgca 2712434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 32383205 - 32383255
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttt 244  Q
    |||||||||||||||| |  |||||||||| ||||||||||| ||||||||    
T  32383205 tcggcagttaactaccgaggttttcctcggtagttaactgcagccgatttt 32383255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 32437160 - 32437210
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttt 244  Q
    |||||||||||||||| |  |||||||||| ||||||||||| ||||||||    
T  32437160 tcggcagttaactaccgaggttttcctcggtagttaactgcagccgatttt 32437210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 34892808 - 34892850
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||| || || ||||||||||||||||||||||    
T  34892808 ctcggcagttaactgccgaagttttcctcggcagttaactgca 34892850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 35047233 - 35047175
Alignment:
Q  192 tctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatt 250  Q
    |||||| ||||||||  | |||||||||||||||||||||||||   ||||||||||||    
T  35047233 tctcggtagttaactgtcgaaattttcctcggcagttaactgcagttgatttttaaatt 35047175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 40077249 - 40077291
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  40077249 ctcggcagttaactaccgaggttttcctcggcagttaactgca 40077291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 41016488 - 41016446
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  41016488 ctcggcagttaactaccgaggttttcctcggcagttaactgca 41016446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 41858143 - 41858197
Alignment:
Q  216 ttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||||| ||| ||||| ||||  ||| ||||||||||||||    
T  41858143 ttcctcggcagttaactgcagccggtttttgaattcttcgccagttaactgccga 41858197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 43520775 - 43520852
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccga 270  Q
    ||||| |||||||| || || |||||||| ||||||||||||| |||||| |||||| || ||| ||||||||||||||    
T  43520775 ctcggtagttaactgccgaagttttcctcagcagttaactgcagccgattctttaaaatt-tcggcagttaactgccga 43520852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 45454457 - 45454403
Alignment:
Q  216 ttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  45454457 ttcctcggcagttaactgcatccggatttcaaattcctcggcagttaactgccga 45454403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 184551 - 184592
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  184551 ctcggcagttaactaccgaggttttcctcggcagttaactgc 184592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 4866850 - 4866805
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaa 236  Q
    ||||||||||||||||||  |||||| | |||||||||||||||||    
T  4866850 ttctcggcagttaactacagaaatttacttcggcagttaactgcaa 4866805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 8419478 - 8419437
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  8419478 ctcggcagttaactaccgaggttttcctcggcagttaactgc 8419437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 26663032 - 26663073
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  26663032 ctcggcagttaactaccgaggttttcctcggcagttaactgc 26663073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 32375725 - 32375684
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  32375725 ctcggcagttaactaccgaggttttcctcggcagttaactgc 32375684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 33482818 - 33482757
Alignment:
Q  212 aattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaag 273  Q
    |||||||||||||| ||||||||| ||||||||    ||||| ||||||||||| |||||||    
T  33482818 aattttcctcggcaattaactgcagccgattttattttttctagacagttaactaccgaaag 33482757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 41276879 - 41276936
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||| ||||||||||||||||| |||| |||  |||| ||| |||||||||||||||    
T  41276879 atttttctcggcagttaactgcagccgaatttctaattcctcaacagttaactgccga 41276936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 7172607 - 7172659
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactg 266  Q
    |||| |||||||||||| |||| ||| |||| |||||||||| ||||||||||    
T  7172607 tttttctcggcagttaattgcagccggttttaaaatttctcggcagttaactg 7172659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 26451554 - 26451482
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaact 265  Q
    ||||||||||||||||| |  ||||||||||||||||||| || |||| |||  |||| |||  |||||||||    
T  26451554 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttctaattcctcagcagttaact 26451482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 32382753 - 32382697
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||| | ||||||||||| ||| |||| || | ||||||||||||||||||||    
T  32382753 ttttcctcagtagttaactgcagccggttttgaactgtctcgacagttaactgccga 32382697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 32436708 - 32436652
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||| | ||||||||||| ||| |||| || | ||||||||||||||||||||    
T  32436708 ttttcctcagtagttaactgcagccggttttgaactgtctcgacagttaactgccga 32436652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 35206657 - 35206701
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||| ||||||||| |||| |||||||||| ||||||||||||    
T  35206657 ttctcgacagttaactgccaagattttcctcgacagttaactgca 35206701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 306
Target Start/End: Complemental strand, 10705324 - 10705209
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatatttta 290  Q
    |||||||||||||||| ||||  |||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||| |  | | |||| | |||||||    
T  10705324 ttctcggcagttaactcccaaggtttttctcggcagttaactgcagccgattttttaatttctcggcagttaactgccaaggggggaaaaatgtatttta 10705225  T
Q  291 catgtgtgcctcagcc 306  Q
    | ||||||||| ||||    
T  10705224 cttgtgtgccttagcc 10705209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 47061009 - 47060888
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaatta 283  Q
    |||||| ||||||||||||||||||| |  ||||||||||||||||||| || |||| |||| |||| |||||||||||||||||||  | ||||||       
T  47061009 aacatatttctcggcagttaactaccgaggttttcctcggcagttaactacagccga-ttttgaattcctcgacagttaactgccgagggggcaaaaacg 47060911  T
Q  284 tattttacatgtgtgcctcagcc 306  Q
    |||||||| ||| ||||||||||    
T  47060910 tattttacttgtatgcctcagcc 47060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 37340376 - 37340298
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| |  |||| ||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||    
T  37340376 ctcggcagttaactaccgaggtttttctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaa 37340298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 335
Target Start/End: Original strand, 9494805 - 9494947
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttaca 292  Q
    |||| ||||||||| || |  |||||||||||||||||||||| ||| ||||| |||| |||| ||||||||||||||  | ||| |    ||||||||     
T  9494805 ctcgacagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttact 9494904  T
Q  293 tgtgtgcctcagccctatcatatgtcttaacagcaattttctt 335  Q
    |||||||||||||| ||| | |||| | |||| ||||||||||    
T  9494905 tgtgtgcctcagccttatgaaatgtgtcaacaacaattttctt 9494947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 36392178 - 36392086
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagcc 306  Q
    |||||||||||||||||| ||||||||||||| |||| ||| ||||||||||| |||  | ||||||   |||||||| ||||||||| ||||    
T  36392178 ttttcctcggcagttaaccgcaaccgatttttgaattcctcaacagttaactgtcgagggggcaaaaacgtattttacttgtgtgcctaagcc 36392086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 46863344 - 46863456
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacat 293  Q
    |||||||||||||||  | |||||| |  ||||||||||||| ||| ||||| ||||||||| ||||||||||||||  | ||||||   |||||||| |    
T  46863344 tcggcagttaactacagagattttcgttcgcagttaactgcagccggtttttcaatttctcggcagttaactgccgatggggcaaaaacgtattttactt 46863443  T
Q  294 gtgtgcctcagcc 306  Q
    ||||| |||||||    
T  46863444 gtgtgtctcagcc 46863456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 35172136 - 35172073
Alignment:
Q  54 atagaatattatgatgtcgtttgattcaagtagccgactctacttaatgagataaaacttggtt 117  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||| | ||||||    
T  35172136 atagaaaattatgatgtcgtttgattcatgtagccgaccctacttagtgagataagagttggtt 35172073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 30355238 - 30355315
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  |||||||||||||||||||||| ||||||||| ||||  ||  || |||||||||||    
T  30355238 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcagcaattaactgccga 30355315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 41047851 - 41047794
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatt 250  Q
    ||||||||||||||||| || ||||||||||||||||||| || |||||| |||||||    
T  41047851 ctcggcagttaactaccgaagttttcctcggcagttaactacacccgattattaaatt 41047794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 47776406 - 47776282
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    |||||||||||| |||| |  |||||||||||||||||||||| || ||||||| ||||||||| |||||||||| |||  | |||||||  ||||||||    
T  47776406 ctcggcagttaattaccgaggttttcctcggcagttaactgcagccagattttt-aatttctcggcagttaactgtcgagggggcaaaatcgtattttac 47776308  T
Q  292 atgtgtgcctcagccctatcatatgt 317  Q
      ||||  ||||||| ||||| ||||    
T  47776307 tcgtgtttctcagccttatcaaatgt 47776282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 41049196 - 41049266
Alignment:
Q  201 ttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||| |  |||||||||||||||||||||| |||||| || ||||  ||||||||||||| |||||    
T  41049196 ttaactaccgaggttttcctcggcagttaactgcagccgattattgaattcttcgacagttaactaccgaa 41049266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 45361703 - 45361625
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    ||||| ||||||||||||||||| |||  |||| |||| |||| ||||||||||||||  ||||||||  |||||||||    
T  45361703 atttttctcggcagttaactgcagccggatttttaattcctcgtcagttaactgccgagggagcaaaaacatattttac 45361625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 618744 - 618801
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  618744 attttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 618801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 17834561 - 17834520
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  17834561 ctcggcagttaactaccgaagttttcctcggcagttaactgc 17834520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 19072511 - 19072462
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt 242  Q
    |||||||||||||| ||||| |||||||||||||||||||| | ||||||    
T  19072511 ctcggcagttaactgccaaagttttcctcggcagttaactgtagccgatt 19072462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 42682068 - 42681991
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||| |||| |  |||||||||||||||||||||| | | ||||| |||||||| || ||||||| ||||    
T  42682068 ctcggcagttaattaccgaggttttcctcggcagttaactgcagctggtttttgaatttctcaaccgttaactaccga 42681991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 306
Target Start/End: Complemental strand, 46860553 - 46860472
Alignment:
Q  225 agttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagcc 306  Q
    |||||||||||  || ||||| |||| |||||||||||||||||||  | ||||||   |||||||| ||||||||||||||    
T  46860553 agttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtattttacttgtgtgcctcagcc 46860472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 40142658 - 40142734
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    |||||||||||||| |||  || ||||| |||| ||||||||||||||| ||| | |||| ||||||| ||||||||    
T  40142658 ttctcggcagttaattacagaagttttcttcggtagttaactgcaaccggtttatgaattcctcgacaattaactgc 40142734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 27453615 - 27453670
Alignment:
Q  215 tttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||| |||  |||| |||| |||| ||||||||||||||    
T  27453615 tttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccga 27453670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 34623401 - 34623456
Alignment:
Q  215 tttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||| ||||| | | |||| |||| ||||||||||||||    
T  34623401 tttcctcggcagttaactgcagccgatctcttaattcctcggcagttaactgccga 34623456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 36185885 - 36185842
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagt 227  Q
    |||||||||||||| ||||||||||| || ||||||||||||||    
T  36185885 aacataattctcggtagttaactaccgaagttttcctcggcagt 36185842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 42795110 - 42795153
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    |||||||||||||||| || || |||||||||||||||||||||    
T  42795110 ttctcggcagttaactgccgaagttttcctcggcagttaactgc 42795153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 48590339 - 48590390
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    ||||||||||||| || | ||||||||||| ||||||||||| |||||||||    
T  48590339 tcggcagttaactgccgagattttcctcggtagttaactgcagccgattttt 48590390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 9367723 - 9367765
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  9367723 ctcggcagttaactaccgaggttttcctcggcagttaactgca 9367765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 13645341 - 13645383
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||| || || ||||||||||||||||||||||    
T  13645341 ctcggcagttaactgcctaagttttcctcggcagttaactgca 13645383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 14102347 - 14102420
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactg 266  Q
    |||||||||||||| || || ||||||||||||||||| |||| |||||| |||||| || ||| ||||||||||    
T  14102347 ctcggcagttaactgccgaagttttcctcggcagttaattgcagccgattctttaaaatt-tcggcagttaactg 14102420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 14412364 - 14412437
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactg 266  Q
    |||||||||||||| || || ||||||||||||||||| |||| |||||| |||||| || ||| ||||||||||    
T  14412364 ctcggcagttaactgccgaagttttcctcggcagttaattgcagccgattctttaaaatt-tcggcagttaactg 14412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 15070429 - 15070379
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattt 243  Q
    ||||||||||||||||| |  |||||||||||||||||||||  |||||||    
T  15070429 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccgattt 15070379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 17840889 - 17840931
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  17840889 ctcggcagttaactaccgaggttttcctcggcagttaactgca 17840931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 19044367 - 19044325
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| || |||||||||||| |||||||||    
T  19044367 ctcggcagttaactaccgaagttttcctcggcaattaactgca 19044325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 20710269 - 20710311
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| || |||||||||||| |||||||||    
T  20710269 ctcggcagttaactaccgaagttttcctcggcaattaactgca 20710311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 29592612 - 29592542
Alignment:
Q  198 cagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgcc 268  Q
    |||||||||||| || ||||| ||||||||||| ||||  ||  ||| ||||| |||||||||||||||||    
T  29592612 cagttaactaccgaagttttcatcggcagttaattgcagtcggatttcaaattcctcgacagttaactgcc 29592542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 38555413 - 38555490
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||| || || |||||||||||||||||||||| | | || |||||| || ||| |||||||||||||||    
T  38555413 tcggcagttaactgccgaagttttcctcggcagttaactgcagctggttctttaaaatt-tcggcagttaactgccgaa 38555490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 40141488 - 40141438
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattt 243  Q
    ||||||| |||||||||||| |||| ||||| ||||||||||| |||||||    
T  40141488 ctcggcaattaactaccaaagtttttctcggtagttaactgcagccgattt 40141438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 42499483 - 42499441
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  42499483 ctcggcagttaactaccgaggttttcctcggcagttaactgca 42499441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 18105447 - 18105406
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  18105447 ctcggcagttaactaccgaggttttcctcggcagttaactgc 18105406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 21188423 - 21188472
Alignment:
Q  217 tcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactg 266  Q
    ||||||||||||||||||| ||| ||||| |||| |||| ||||||||||    
T  21188423 tcctcggcagttaactgcagccggtttttgaattcctcggcagttaactg 21188472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 35606863 - 35606822
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  35606863 ctcggcagttaactaccgaggttttcctcggcagttaactgc 35606822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 45767860 - 45767901
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  45767860 ctcggcagttaactaccgaggttttcctcggcagttaactgc 45767901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 5537925 - 5537869
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||||||| |||| |||  |||| |||| ||| ||||||||||    
T  5537925 ttttcctcggcagttaactgcagccgaatttctaattcctcggcagctaactgccga 5537869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 33603254 - 33603202
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgat-ttttaaatttctcgacagttaact 265  Q
    |||||||||| ||||||||||||||||| |||| ||||| ||| |||||||||    
T  33603254 ttttcctcgggagttaactgcaaccgattttttgaatttgtcggcagttaact 33603202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 46596954 - 46596902
Alignment:
Q  198 cagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatt 250  Q
    ||||||||| || || |||||||||||||||||||||| | ||||||| ||||    
T  46596954 cagttaactcccgaagttttcctcggcagttaactgcagctgatttttgaatt 46596902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 16192852 - 16192766
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||||| || |   |||||||| || ||||||||| |||||||||||||| |||||||||||||||||||    
T  16192852 aacataattctcggcagttaactgccgaggctttcctcgacacttaactgcagccgatttttaaattactcgacagttaactgccga 16192766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 334
Target Start/End: Complemental strand, 23958966 - 23958823
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatatttta 290  Q
    ||||||||||||||||||| |  |||||||||||| ||||||||| ||| ||||  ||||||||| ||||||||||||||  |  |||||   |||||||    
T  23958966 ttctcggcagttaactaccgaggttttcctcggcatttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgtatttta 23958867  T
Q  291 catgtgtgcctcagccctatcatatgtcttaacagcaattttct 334  Q
      || ||| ||||||| |||||||||| | |||| |||||||||    
T  23958866 gttgggtgtctcagccttatcatatgtgtcaacaacaattttct 23958823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 13401560 - 13401483
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||| ||||||||||||| ||||||||  ||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  13401560 ctcggtagttaactaccaatattttccttagcagttaactgcagccgattttttaattcctcggcagttaactgccga 13401483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 13388707 - 13388784
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  ||||||||| |||||||||||| |||| ||| |||||||||| ||||||||| ||||    
T  13388707 ctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttgaaatttctcggcagttaactaccga 13388784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 306
Target Start/End: Complemental strand, 2051098 - 2050990
Alignment:
Q  197 gcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtg 296  Q
    |||| |||||||| |  ||||||||||||||||||||||||||  ||| |||||  ||| ||||||||||||||| ||||||||   ||||||||  |||    
T  2051098 gcagataactaccgaggttttcctcggcagttaactgcaaccg-gtttcaaattcatcggcagttaactgccgaaggagcaaaaacgtattttactcgtg 2051000  T
Q  297 tgcctcagcc 306  Q
    ||| ||||||    
T  2050999 tgcatcagcc 2050990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 13404627 - 13404708
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||| ||||||||||||||||||  |||||| ||||||||||||||| | | || || |||| |||||||||||||| ||||    
T  13404627 aattttcggcagttaactaccaaggttttccacggcagttaactgcagcaggttattgaattcctcgacagttaactaccga 13404708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 31768827 - 31768750
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  |||||||||||| ||||||||| |||  |||| |||| |||| ||||||||||||||    
T  31768827 ctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttaactgccga 31768750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 23986009 - 23986093
Alignment:
Q  222 ggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagcc 306  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||| |  | ||||||   |||||||| |||||| |||||||    
T  23986009 ggcagttaactgcaaccggtttttgaatttctcggcagttaactgccaagggggcaaaaacgtattttacttgtgtgtctcagcc 23986093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 22305182 - 22305103
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| |  |||||||||||||||||||||| || ||||||| ||  | ||| |||||||||||||||    
T  22305182 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaa 22305103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 31146456 - 31146373
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    |||||| | ||||||||||||||||| |  ||||||||| |||||||||||| |||  ||| ||||| |||| |||||||||||    
T  31146456 aacatattcctcggcagttaactaccgatgttttcctcgacagttaactgcagccggatttcaaattcctcggcagttaactgc 31146373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 8193208 - 8193282
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||  | || |||||||||||||||||||||| |||  |||| |||| |||| |||||||||||    
T  8193208 ctcggcagttaactgtcgaagttttcctcggcagttaactgcagccgtgtttttaattcctcggcagttaactgc 8193282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 12783956 - 12784069
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttaca 292  Q
    ||||||||||||||||  |  ||||||||| ||| |||||||| ||| || || ||||  ||| ||||||||||||||  | ||||||   ||||||||     
T  12783956 ctcggcagttaactactgaggttttcctcgacagctaactgcagccggttattgaattcatcggcagttaactgccgatggggcaaaagcgtattttact 12784055  T
Q  293 tgtgtgcctcagcc 306  Q
    ||||||||||||||    
T  12784056 tgtgtgcctcagcc 12784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 9048149 - 9048097
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    ||||||||||||||||| || |||||||||| ||||||||||| ||| |||||    
T  9048149 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttt 9048097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 9049083 - 9049135
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    ||||||||||||||||| || |||||||||| ||||||||||| ||| |||||    
T  9049083 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttt 9049135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 29076322 - 29076409
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||||||||||||| |  |||||||| ||||||||||||| || ||||| ||||  | ||||||||||||||||||| | ||||||    
T  29076322 ctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaact-tcgacagttaactgccgaaggggcaaaa 29076409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 29109855 - 29109942
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||||||||||||| |  |||||||| ||||||||||||| || ||||| ||||  | ||||||||||||||||||| | ||||||    
T  29109855 ctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaact-tcgacagttaactgccgaaggggcaaaa 29109942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 29111295 - 29111382
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    ||||||||||||||||| |  |||||||| ||||||||||||| || ||||| ||||  | ||||||||||||||||||| | ||||||    
T  29111295 ctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaact-tcgacagttaactgccgaaggggcaaaa 29111382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 32223512 - 32223564
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    ||||||||||||||||| || ||||||||||  |||||||||| |||||||||    
T  32223512 ctcggcagttaactaccgaagttttcctcggtggttaactgcagccgattttt 32223564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 334
Target Start/End: Complemental strand, 13479770 - 13479659
Alignment:
Q  223 gcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcatatgtcttaa 322  Q
    ||||||||||||| | | ||||| |||| | |||||||||||| ||||  | ||||||   |||||||| |||||||||||||| ||| | |||| | ||    
T  13479770 gcagttaactgcagctggtttttgaattccccgacagttaactaccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaa 13479671  T
Q  323 cagcaattttct 334  Q
    || |||||||||    
T  13479670 caacaattttct 13479659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 6204901 - 6204859
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  6204901 ctcggcagttaactaccgaggttttcctcggcagttaactgca 6204859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 11691868 - 11691826
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  11691868 ctcggcagttaactaccgaggttttcctcggcagttaactgca 11691826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 17338761 - 17338815
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattttt 245  Q
    |||||||||||||| | || || |||||||||||||||||||||| || ||||||    
T  17338761 ttctcggcagttaattgccgaagttttcctcggcagttaactgcagccaattttt 17338815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 26712122 - 26712072
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgattt 243  Q
    ||||||||||||||||| |  |||||||||||||||||||||  |||||||    
T  26712122 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccgattt 26712072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 28362734 - 28362804
Alignment:
Q  197 gcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||| | |  |||||||||||||||||||||| |||  ||| ||||| |||| |||||||||||    
T  28362734 gcagttaactatcgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgc 28362804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 29097828 - 29097913
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaaagagcaaa 279  Q
    |||||||||||||||| || |||| ||| ||||||||||||| || ||||| |||| || ||||||||||| |||||| ||| ||||    
T  29097828 tcggcagttaactaccgaagtttttctcagcagttaactgcagccggatttctaaaatt-tcgacagttaattgccgagagaacaaa 29097913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 31771740 - 31771782
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||| ||||||||| | |||||||||||||||||||||||    
T  31771740 ctcggcaattaactaccgagattttcctcggcagttaactgca 31771782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 32643523 - 32643597
Alignment:
Q  196 ggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| |  ||||||||| |||||||||||| |||  |||| |||| || | ||||||||||||||    
T  32643523 ggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattccttggcagttaactgccga 32643597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 13382703 - 13382662
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  13382703 ctcggcagttaactaccgaggttttcctcggcagttaactgc 13382662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 260
Target Start/End: Complemental strand, 13616324 - 13616247
Alignment:
Q  183 taacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagt 260  Q
    ||||||| |||||| |||||||||||| || ||||| |  |||||||||||||  || ||||| |||| |||||||||    
T  13616324 taacatatttctcgacagttaactaccgaagttttctttagcagttaactgcagtcggttttttaattcctcgacagt 13616247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 15888797 - 15888850
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttt 244  Q
    ||||||||||| |||||||  | |||||||||||||||||||||| ||| ||||    
T  15888797 ttctcggcagtaaactaccgcagttttcctcggcagttaactgcagccggtttt 15888850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 17597523 - 17597564
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    |||||||||||||| || || |||||||||||||||||||||    
T  17597523 ctcggcagttaactcccgaagttttcctcggcagttaactgc 17597564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 18347095 - 18347038
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||||| |||  ||| | ||| |||| ||||||||||||||    
T  18347095 attttcctcggcagttaactgcagccggatttcagattcctcggcagttaactgccga 18347038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 18351643 - 18351688
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccg 239  Q
    |||||||||||||||| |  ||||||||||||||||||||| ||||    
T  18351643 tcggcagttaactaccgaggttttcctcggcagttaactgccaccg 18351688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 24219648 - 24219603
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaa 236  Q
    ||||||||||||||||||| |||||| | | |||||||||||||||    
T  24219648 ttctcggcagttaactaccgaaatttactttggcagttaactgcaa 24219603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 25141099 - 25141156
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    |||||||||||||||||||| | | | | ||| |||| ||||||||||||||||||||    
T  25141099 ttttcctcggcagttaactgtagctggtatttgaattcctcgacagttaactgccgaa 25141156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 28249959 - 28249918
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  28249959 ctcggcagttaactaccgaggttttcctcggcagttaactgc 28249918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 8192410 - 8192362
Alignment:
Q  199 agttaactaccaaaattttcctcggcagttaactgcaaccgatttttaa 247  Q
    |||||||| || || ||||||||||||||||||| |||||| |||||||    
T  8192410 agttaactgccgaagttttcctcggcagttaactacaaccggtttttaa 8192362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 17597009 - 17596941
Alignment:
Q  199 agttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    |||||||| || | ||||||||||||||||||||||| ||| ||||    || ||||||||||||||||    
T  17597009 agttaactgccgagattttcctcggcagttaactgcagccggttttatttttcctcgacagttaactgc 17596941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 18001266 - 18001211
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||| |||||||||||||||| ||| ||||| |||| ||| |||||||||||||||    
T  18001266 ttttcttcggcagttaactgcagccggttttt-aattcctcaacagttaactgccga 18001211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 18606120 - 18606076
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||    
T  18606120 ttctcggcagttaagtaccgaggttttcctcggcagttaactgca 18606076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 29286282 - 29286226
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||||||||||| ||| | | || |||| ||||||||| ||||    
T  29286282 ttttcctcggcagttaactgcaaccggtttcttatttcctcggcagttaactaccga 29286226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 23220 - 23296
Alignment:
Q  187 ataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaa 263  Q
    |||||| ||||||||||| || ||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  23220 ataattttcggcagttaattatcaatattttcctcggtagttaactgcagccgatttttaaattcctcgacagttaa 23296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 3951 - 3850
Alignment:
Q  201 ttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcc 300  Q
    ||||||||| |  |||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  |  |||||  ||||||||| ||||||||    
T  3951 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaa-aatattttacttgtgtgcc 3853  T
Q  301 tca 303  Q
    |||    
T  3852 tca 3850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 22477 - 22400
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| | ||||||||| ||||||||||||| |||| ||| ||||| |||| ||||||||||||||    
T  22477 ctcggcagttaactaccgagattttcctcagcagttaactgcagccgaatttcaaattcctcggcagttaactgccga 22400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 49572895 - 49573012
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| ||| ||||| |||||| |  |||||||||||||||||||||| |||||| || |||| ||||||||||||||| |||  | ||||||   |||||    
T  49572895 aattttcgacagtttactaccgaggttttcctcggcagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtattt 49572994  T
Q  289 tacatgtgtgcctcagcc 306  Q
    ||| ||||||||||||||    
T  49572995 tacttgtgtgcctcagcc 49573012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 51426615 - 51426498
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattt 288  Q
    |||| |||||||||||||||  |  |||| ||||||| ||||||||| ||||||||| |||| ||||||||||||||| ||||||  |||||   |||||    
T  51426615 aattttcggcagttaactactgaggtttttctcggcaattaactgcagccgatttttgaattcctcgacagttaactgtcgaaaggacaaaaacgtattt 51426516  T
Q  289 tacatgtgtgcctcagcc 306  Q
    ||| ||||||||| ||||    
T  51426515 tacttgtgtgcctaagcc 51426498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 333
Target Start/End: Original strand, 958593 - 958732
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttaca 292  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||| ||||| ||||  ||| |||||||||| ||| ||  |||||   ||||||||     
T  958593 ctcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcatcg-cagttaactgtcgagaggacaaaaacgtattttact 958691  T
Q  293 tgtgtgcctcagccctatcatatgtcttaacagcaattttc 333  Q
    | |||||||||||| ||| | |||| | |||| ||||||||    
T  958692 tatgtgcctcagccttataaaatgtgtcaacatcaattttc 958732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 4768726 - 4768610
Alignment:
Q  219 ctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacatgtgtgcctcagccctatcatatgtc 318  Q
    ||||||||||||||||| ||   |||| |||| |||| ||||||||||||||  | ||||||||||||||||| ||||||| |||||| ||| | ||||     
T  4768726 ctcggcagttaactgcagccagattttgaattcctcggcagttaactgccgagggggcaaaattatattttacttgtgtgcatcagccttatgaaatgtg 4768627  T
Q  319 ttaacagcaattttctt 335  Q
    | |||| ||||||||||    
T  4768626 tcaacaacaattttctt 4768610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 955870 - 955756
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaaga-gcaaaattatatt 287  Q
    |||| |||||||||||||||| |  |||| ||||||||||||||||| ||||||||| |||| |||  |||||||||||| ||||| ||||||   ||||    
T  955870 aattttcggcagttaactaccgaggtttttctcggcagttaactgcagccgatttttgaattcctcagcagttaactgcc-aaagaggcaaaaacgtatt 955772  T
Q  288 ttacatgtgtgcctca 303  Q
    |||| |||||||||||    
T  955771 ttacttgtgtgcctca 955756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 9473663 - 9473734
Alignment:
Q  196 ggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||| | |||| ||||||| ||||||||    
T  9473663 ggcagttaactaccgaaattttcctcggtagttaactgcagccgatttatgaattcctcgacaattaactgc 9473734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 291
Target Start/End: Original strand, 1044538 - 1044616
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttac 291  Q
    ||||||||||||||||||||||| ||   ||| |||||  ||||||||||||||||||| ||||||||| |||||||||    
T  1044538 attttcctcggcagttaactgcagccagatttcaaattcatcgacagttaactgccgaaggagcaaaatcatattttac 1044616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 11494626 - 11494541
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||| |||||||||||||||| |  |||||||||||||||||||||| |||  |||| |||| |||||||||||| ||||||    
T  11494626 aacataattttcggcagttaactaccgaggttttcctcggcagttaactgcagccg-gttttgaattcctcgacagttaattgccga 11494541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 335
Target Start/End: Original strand, 44561329 - 44561471
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttaca 292  Q
    ||||||||||||||||| | ||||||||||| ||||||||||| ||| ||||| | || |||| ||||||||  |||| || |||||||  ||||||||     
T  44561329 ctcggcagttaactaccgagattttcctcggtagttaactgcagccggttttttatttactcggcagttaacaaccgagagggcaaaatcgtattttact 44561428  T
Q  293 tgtgtgcctcagccctatcatatgtcttaacagcaattttctt 335  Q
     ||||  ||||||| ||| | |||| | |||| ||||||||||    
T  44561429 cgtgtttctcagccttatgaaatgtgtcaacaacaattttctt 44561471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 9890068 - 9889991
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  |||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  9890068 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 9889991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 15999798 - 15999875
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  ||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||    
T  15999798 ctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttcaaatttctcggcagttaactgccga 15999875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 21472503 - 21472560
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  21472503 attttcctcggcagttaactgcagccgatttttgaattcctcggcagttaactgccga 21472560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 37959715 - 37959796
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||| |||||||||||||||| |  |||||||||||||||||||||| | | || ||||||| ||| |||||||||||||||    
T  37959715 aattttcggcagttaactaccgatgttttcctcggcagttaactgcagctggttattaaattcctcaacagttaactgccga 37959796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 48806559 - 48806479
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccgaaag 273  Q
    |||||||||||||| |  ||||||||||||||||||||||||| ||| || |||||| || |||||||||||||||||||||    
T  48806559 ctcggcagttaactgctgaaattttcctcggcagttaactgcagccggttctttaaaatt-tcgacagttaactgccgaaag 48806479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 17342218 - 17342142
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||||| || |||| ||||| ||||||||||| ||||||| | |||| |||| |||||||||||    
T  17342218 ttctcggcagttaactaccgaagtttttctcggtagttaactgcagccgatttatgaattcctcggcagttaactgc 17342142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 33383878 - 33383771
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaattatattttacat 293  Q
    ||||||||||||| || |  ||||||||||||||||||||||  || |||||||| | ||||||| |||||| |||| |  |||||| | |||||||| |    
T  33383878 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcggtttttaaaatcctcgacaattaactaccgagaaggcaaaaatgtattttactt 33383779  T
Q  294 gtgtgcct 301  Q
    ||||||||    
T  33383778 gtgtgcct 33383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 4979916 - 4979993
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| | | ||||||| ||||||||||||| ||| ||||| || |  ||||||||||||||||||    
T  4979916 ctcggcagttaactaccgataatttcctcagcagttaactgcagccggtttttgaaatcgtcgacagttaactgccga 4979993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 15995796 - 15995719
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  |||||||||||||||||||||| |||  ||| ||||| |||| || |||||||||||    
T  15995796 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccga 15995719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 19069261 - 19069184
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  |||||||||||||||||||||| |||  ||| ||||| |||| || |||||||||||    
T  19069261 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccga 19069184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 17343399 - 17343475
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||||  || ||||| |||| | ||||||||||||| ||| | |||| ||||||||||||||||    
T  17343399 ttctcggcagttaactacagaagttttcttcggtaattaactgcaaccggtttatgaattcctcgacagttaactgc 17343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 21470986 - 21470867
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga-aagagcaaaatt 282  Q
    |||||| ||||||||||||||||||| |  |||||||| || ||||||||||  |  ||||| |||  ||||||||||||||||||| |||| |||||      
T  21470986 aacatatttctcggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttttgaatacctcgacagttaactgccgagaaga-caaaaac 21470888  T
Q  283 atattttacatgtgtgcctca 303  Q
     |||||||| |||||||||||    
T  21470887 gtattttacttgtgtgcctca 21470867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 34151692 - 34151616
Alignment:
Q  189 aattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaact 265  Q
    |||| ||||||||| |||||| |  |||||||||||||||||||||| ||||||||| |||| |||| || ||||||    
T  34151692 aattttcggcagtttactaccgaggttttcctcggcagttaactgcagccgatttttgaattactcggcatttaact 34151616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 41023460 - 41023385
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgcc 268  Q
    ||||||||||||||||| |   ||||||| ||||||||||||| |||  ||| |||||||||| ||||||||||||    
T  41023460 ctcggcagttaactaccgaggatttcctcagcagttaactgcagccggatttcaaatttctcggcagttaactgcc 41023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 55407792 - 55407847
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaa 247  Q
    ||||||||||||||||| | ||||||||||||||||||||||| || |||||||||    
T  55407792 ctcggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaa 55407847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 3403901 - 3403843
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||||||||| |||  ||| ||||| |||| |||||||||||||||    
T  3403901 attttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaa 3403843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 19682111 - 19682161
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttt 244  Q
    ||||||||||||| ||||||||||||||||  |||||||||| ||||||||    
T  19682111 tcggcagttaactgccaaaattttcctcgggcgttaactgcagccgatttt 19682161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 37394302 - 37394244
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaa 271  Q
    |||| |||||||||||||||||| |||  ||| ||||| ||||||||||||||||||||    
T  37394302 atttacctcggcagttaactgcatccggatttcaaattcctcgacagttaactgccgaa 37394244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 56138326 - 56138223
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gattttta----aatttctcgacagttaactgccgaaagagcaaaattatatt 287  Q
    ||||||||||||||||  |  |||||||||||||||||||||| || ||||||||    ||||||||| |||||||||| |||| | |||||||  ||||    
T  56138326 ctcggcagttaactactgaggttttcctcggcagttaactgcagccggatttttaatttaatttctcggcagttaactgtcgaaggggcaaaatcgtatt 56138227  T
Q  288 ttac 291  Q
    ||||    
T  56138226 ttac 56138223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 1042009 - 1041932
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| | ||||| |||||||||||||||||  ||  |||  |||| |||| ||||||||||||||    
T  1042009 ctcggcagttaactaccgagatttttctcggcagttaactgcagtcggatttctaattcctcggcagttaactgccga 1041932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 17139678 - 17139622
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||| ||||||||||||||||| ||| ||||| | ||||||||||||||||||||||    
T  17139678 atttttctcggcagttaactgcagccggtttttta-tttctcgacagttaactgccga 17139622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 18884503 - 18884580
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| || || |||| ||||||||||||||||| ||| ||||| ||  | ||| ||||||||||||||    
T  18884503 ctcggcagttaactgccgaagtttttctcggcagttaactgcagccggtttttcaaaatttcggcagttaactgccga 18884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 334
Target Start/End: Original strand, 29700302 - 29700442
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga-aagagcaaaattatattttaca 292  Q
    |||||| ||||||||| |  |||||||||||||||||||||| ||| || || |||| |||  |||||||||| |||  ||| |||||   ||||||||     
T  29700302 tcggcaattaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcagttaactgtcgaggaga-caaaagcgtattttact 29700400  T
Q  293 tgtgtgcctcagccctatcatatgtcttaacagcaattttct 334  Q
    |||||||||||||| ||| | |||| | |||| |||||||||    
T  29700401 tgtgtgcctcagccttatgaaatgtgtcaacaacaattttct 29700442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 37865218 - 37865185
Alignment:
Q  217 tcctcggcagttaactgcaaccgatttttaaatt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  37865218 tcctcggcagttaactgcaaccgatttttaaatt 37865185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 48256566 - 48256622
Alignment:
Q  192 tctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaa 247  Q
    |||||||||||||||||  || |||||||||||||||||||||| || |||||||||    
T  48256566 tctcggcagttaactactgaagttttcctcggcagttaactgcagccggatttttaa 48256622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 24414902 - 24414839
Alignment:
Q  200 gttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaa 263  Q
    |||||||||| |  |||| ||| ||||||||||||||||||||||| |||| |||| |||||||    
T  24414902 gttaactaccgaggttttactcagcagttaactgcaaccgatttttgaattcctcggcagttaa 24414839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 55793994 - 55793915
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaa 271  Q
    |||||||||||||| || |  |||||||||||||||||||||| || ||||||| ||  | ||| |||||||||||||||    
T  55793994 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaa 55793915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 4783719 - 4783677
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgcaa 236  Q
    ||||||||||||| || || |||||||||||||||||||||||    
T  4783719 tcggcagttaactgccgaagttttcctcggcagttaactgcaa 4783677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 6178109 - 6178151
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  6178109 ctcggcagttaactaccgaggttttcctcggcagttaactgca 6178151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 6280926 - 6280844
Alignment:
Q  198 cagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaaa 280  Q
    |||||||||||| |  |||||||| | | ||||||||| ||| ||||||||||  | |||||||||||||||| || ||||||    
T  6280926 cagttaactaccgatgttttcctcagtatttaactgcagccggtttttaaattctttgacagttaactgccgagagggcaaaa 6280844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 18578702 - 18578648
Alignment:
Q  214 ttttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgcc 268  Q
    |||| |||||||| |||||||| ||| ||||| |||| |||||||||||||||||    
T  18578702 tttttctcggcagataactgcagccgttttttgaattcctcgacagttaactgcc 18578648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 21022887 - 21022929
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  21022887 ctcggcagttaactaccgaggttttcctcggcagttaactgca 21022929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 26792246 - 26792284
Alignment:
Q  196 ggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  26792246 ggcagttaactaccgagattttcctcggcagttaactgc 26792284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 34503783 - 34503709
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||| || |||| ||||| ||||||||||| | | ||| | |||| |||| |||||||||||    
T  34503783 ctcggcagttaactaccgaagtttttctcggtagttaactgcagctggtttatgaattcctcggcagttaactgc 34503709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 37015969 - 37015931
Alignment:
Q  196 ggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    |||||||||||||| || |||||||||||||||||||||    
T  37015969 ggcagttaactaccgaagttttcctcggcagttaactgc 37015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 48807389 - 48807462
Alignment:
Q  197 gcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccga 270  Q
    |||||||||| || || |||||||| ||||||||||||| ||| || |||||| || ||||||||||||||||||    
T  48807389 gcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatt-tcgacagttaactgccga 48807462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 49094158 - 49094116
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  49094158 ctcggcagttaactaccgaggttttcctcggcagttaactgca 49094116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 4136796 - 4136751
Alignment:
Q  72 gtttgattcaagtagccgactctacttaatgagataaaacttggtt 117  Q
    ||||||| || ||||||||| ||||||| |||||||||||||||||    
T  4136796 gtttgatccatgtagccgaccctacttagtgagataaaacttggtt 4136751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 24417446 - 24417487
Alignment:
Q  224 cagttaactgcaaccgatttttaaatttctcgacagttaact 265  Q
    |||||||||||| ||| ||||| |||||||||||||||||||    
T  24417446 cagttaactgcagccggtttttgaatttctcgacagttaact 24417487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 30726740 - 30726781
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  30726740 ctcggcagttaactaccgaggttttcctcggcagttaactgc 30726781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 31425317 - 31425358
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  31425317 ctcggcagttaactaccgaggttttcctcggcagttaactgc 31425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 34154425 - 34154478
Alignment:
Q  217 tcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||| ||||||||||||| ||| ||||| |||| |||| ||||||||||||||    
T  34154425 tcctctgcagttaactgcagccggttttttaattcctcggcagttaactgccga 34154478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 37563279 - 37563320
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  37563279 ctcggcagttaactaccgaggttttcctcggcagttaactgc 37563320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 39590568 - 39590609
Alignment:
Q  194 tcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    |||||||||||||||| |  ||||||||||||||||||||||    
T  39590568 tcggcagttaactaccgaggttttcctcggcagttaactgca 39590609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 39773478 - 39773437
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  39773478 ctcggcagttaactaccgaggttttcctcggcagttaactgc 39773437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 40358279 - 40358320
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  40358279 ctcggcagttaactaccgaggttttcctcggcagttaactgc 40358320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 49889736 - 49889680
Alignment:
Q  214 ttttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||||    
T  49889736 ttttcctcggcagttaactgcaaccagatttctaaaact-tcgacagttaactgccga 49889680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 54634014 - 54634055
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  54634014 ctcggcagttaactaccgaggttttcctcggcagttaactgc 54634055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 20209324 - 20209368
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||||||||||||||| || |||| ||| |||||||||||||    
T  20209324 ttctcggcagttaactaccgaagttttactcagcagttaactgca 20209368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 38368304 - 38368260
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgca 235  Q
    ||||||| |||| |||||| || ||||||||||||||||||||||    
T  38368304 ttctcggtagtttactaccgaagttttcctcggcagttaactgca 38368260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 44719425 - 44719369
Alignment:
Q  61 attatgatgtcgtttgattcaagtagccgactctacttaatgagataaaacttggtt 117  Q
    |||||| ||||||||||| || ||||||||| ||||||| || ||||| ||||||||    
T  44719425 attatggtgtcgtttgatccatgtagccgaccctacttagtgggataagacttggtt 44719369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 15754 - 15704
Alignment:
Q  216 ttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactg 266  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||||||||    
T  15754 ttcctcggcagttaactgcaaccggtttttgaattcctcgacagttaactg 15704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 20111 - 20185
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||| ||||||| |   |||||||| |||||||||| | ||||||||| |||| |||| |||||||||||    
T  20111 ctcggcagtaaactaccgaggatttcctcgacagttaactgtagccgatttttgaattcctcggcagttaactgc 20185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 905 - 828
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |  ||||||||||||||||||| || |||| ||| ||||| || | ||||||||||||||    
T  905 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttcaaattcctaggcagttaactgccga 828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 5405 - 5364
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  5405 ctcggcagttaactaccgaggttttcctcggcagttaactgc 5364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 17350 - 17427
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||| |   ||||||||||||||||||||| |||  ||| ||||| |||| ||||||||||||||    
T  17350 ctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 17427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 15619 - 15662
Alignment:
Q  191 ttctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  15619 ttctcggcagttaactaccaaggttttcctcggcagttaactgc 15662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 15954 - 16040
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaagagcaaa 279  Q
    ||||| ||||||||||| |  |||||||||||||||||||||| | |  ||| ||||| |||| ||||||||||||||  |||||||    
T  15954 ctcggaagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccgagggagcaaa 16040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 65392 - 65314
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgat--ttttaaatttctcgacagttaactgccgaa 271  Q
    |||||||||||||| || || ||||||||| |||||||||||| |||||  |||||||||  ||| |||||||||||||||    
T  65392 ctcggcagttaactgccgaagttttcctcgacagttaactgcagccgattcttttaaatt--tcggcagttaactgccgaa 65314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 36533 - 36612
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaacc-gatttttaaatttctcgacagttaactgccgaa 271  Q
    ||||||||||||||||| |  ||||||||||||||||| |||| || ||||||| ||  | ||| |||||||||||||||    
T  36533 ctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttttcaaaatttcggcagttaactgccgaa 36612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 232600 - 232545
Alignment:
Q  215 tttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||||||||||  ||  |||| |||| |||||||||||||||||||    
T  232600 tttcctcggcagttaactgcagtcggatttttaattcctcgacagttaactgccga 232545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 232831 - 232893
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcg 255  Q
    ||||||||||||||||| |  ||||||||||||||||| |||| |||| |||| |||| ||||    
T  232831 ctcggcagttaactaccgaggttttcctcggcagttaattgcagccgaatttttaattcctcg 232893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 758 - 832
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgc 267  Q
    ||||||||||||||||| || ||||||| || ||||||| ||| ||| ||| | |||| |||| |||||||||||    
T  758 ctcggcagttaactaccgaagttttcctaggtagttaacagcagccggtttatgaattcctcggcagttaactgc 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 7294 - 7360
Alignment:
Q  184 aacataattctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatt 250  Q
    |||||||||||||||||||||||||| |  |||| |||||||||| | |||| ||| ||||| ||||    
T  7294 aacataattctcggcagttaactaccgaggtttttctcggcagttgattgcagccggtttttgaatt 7360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 127575 - 127498
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatt-tttaaatttctcgacagttaactgccga 270  Q
    |||||||||||||| || || |||||||| |||||||||| ||||||||| |||||| || ||| ||||||||| ||||    
T  127575 ctcggcagttaactgccgaagttttcctctgcagttaactacaaccgattctttaaaatt-tcggcagttaactaccga 127498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 422 - 463
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  422 ctcggcagttaactaccgaggttttcctcggcagttaactgc 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 11834 - 11777
Alignment:
Q  213 attttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccga 270  Q
    ||||||||||||||||||||||| |||  ||| ||||| ||||  |||||||||||||    
T  11834 attttcctcggcagttaactgcagccggatttcaaattcctcggtagttaactgccga 11777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 3858 - 3919
Alignment:
Q  212 aattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccgaaag 273  Q
    |||||||||||||| ||||||||| ||||||||    ||||| ||||||||||| |||||||    
T  3858 aattttcctcggcaattaactgcagccgattttattttttctagacagttaactaccgaaag 3919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 50121 - 50080
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgc 234  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  50121 ctcggcagttaactaccgaggttttcctcggcagttaactgc 50080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 13908 - 13984
Alignment:
Q  193 ctcggcagttaactaccaaaattttcctcggcagttaactgcaaccgatttttaaatttctcgacagttaactgccg 269  Q
    ||||| |||||||| || |  |||| ||||||||||||||||| |||  |||| ||||||||| ||||| |||||||    
T  13908 ctcggtagttaactgccgatgtttttctcggcagttaactgcagccgtgtttttaatttctcggcagttcactgccg 13984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University