View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6547_high_21 (Length: 294)
Name: NF6547_high_21
Description: NF6547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6547_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 31 - 279
Target Start/End: Original strand, 30876801 - 30877042
Alignment:
| Q |
31 |
taactacgcatggattttagttgtggtgtatagataagttatatgtgttccctca-aaaaagaaaagat-aagttatatgtgttgtctccattaaataat |
128 |
Q |
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| T |
30876801 |
taactacgcatggattttagttgcggtgtatagataagttatatgtgttccctcagaaaaaaaaaagattaagttatatgtgttgtctccattaaataat |
30876900 |
T |
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| Q |
129 |
gttcaaattacattatcttttcattta-ttttaaaaacatagattctcctctcataggatattaatatttcttgtactttaagttatatacattaataac |
227 |
Q |
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| T |
30876901 |
gttcaaattacattatcttttcatttatttttaaaaaca----------tgtcataggatattactatttcttgtactttaagttatatacattaataac |
30876990 |
T |
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| Q |
228 |
ttttttgataaatttaaagtaatatatgatcacctctcttcacgactttcag |
279 |
Q |
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| T |
30876991 |
ttttttgataaatttaaagtaatatatgatcacctctcttcacgactttcag |
30877042 |
T |
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