View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6547_low_15 (Length: 417)

Name: NF6547_low_15
Description: NF6547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6547_low_15
NF6547_low_15
[»] chr4 (52 HSPs)
chr4 (3-402)||(18459388-18459786)
chr4 (1-383)||(7452469-7452858)
chr4 (94-341)||(8010954-8011214)
chr4 (11-383)||(10394569-10394963)
chr4 (151-384)||(9149497-9149745)
chr4 (1-264)||(4156812-4157072)
chr4 (160-383)||(6346731-6346968)
chr4 (160-351)||(5943067-5943259)
chr4 (151-324)||(7044870-7045057)
chr4 (151-231)||(7825157-7825237)
chr4 (160-351)||(7045058-7045265)
chr4 (267-344)||(37240476-37240553)
chr4 (151-216)||(7815754-7815819)
chr4 (187-341)||(10143043-10143211)
chr4 (151-211)||(7803203-7803263)
chr4 (149-264)||(55476080-55476195)
chr4 (72-141)||(6347015-6347084)
chr4 (191-383)||(24719722-24719921)
chr4 (261-344)||(5361780-5361863)
chr4 (151-242)||(8743708-8743801)
chr4 (155-243)||(18403639-18403728)
chr4 (275-383)||(8889462-8889569)
chr4 (151-236)||(22060666-22060753)
chr4 (272-377)||(4157269-4157377)
chr4 (272-377)||(4157556-4157664)
chr4 (180-379)||(9911191-9911403)
chr4 (180-342)||(17466216-17466391)
chr4 (185-241)||(5846050-5846106)
chr4 (185-264)||(8409723-8409801)
chr4 (265-327)||(55476223-55476285)
chr4 (180-264)||(5375801-5375885)
chr4 (189-264)||(5884202-5884277)
chr4 (1-64)||(7044776-7044839)
chr4 (268-351)||(9770350-9770433)
chr4 (1-141)||(24719566-24719695)
chr4 (180-241)||(13023707-13023768)
chr4 (152-196)||(46664264-46664308)
chr4 (151-264)||(20812634-20812750)
chr4 (306-381)||(46664152-46664227)
chr4 (180-226)||(5361909-5361955)
chr4 (262-384)||(23064736-23064858)
chr4 (187-264)||(36120968-36121043)
chr4 (262-383)||(36121055-36121176)
chr4 (268-327)||(5375903-5375962)
chr4 (200-243)||(8020731-8020774)
chr4 (5-55)||(9770165-9770215)
chr4 (268-341)||(8743583-8743656)
chr4 (297-382)||(22060526-22060611)
chr4 (297-329)||(4157054-4157086)
chr4 (297-329)||(5884085-5884117)
chr4 (297-329)||(9911409-9911441)
chr4 (297-341)||(13551490-13551534)
[»] chr7 (61 HSPs)
chr7 (1-329)||(21157523-21157854)
chr7 (72-383)||(26565324-26565648)
chr7 (81-344)||(30294291-30294559)
chr7 (262-383)||(39182388-39182509)
chr7 (261-375)||(1977780-1977893)
chr7 (151-243)||(17809057-17809149)
chr7 (261-383)||(22687043-22687165)
chr7 (262-383)||(14055489-14055609)
chr7 (262-383)||(14365517-14365637)
chr7 (151-242)||(1981266-1981358)
chr7 (180-383)||(44944621-44944837)
chr7 (152-264)||(25842653-25842765)
chr7 (268-383)||(4574968-4575083)
chr7 (180-383)||(5058666-5058881)
chr7 (152-264)||(23618351-23618463)
chr7 (261-329)||(8329874-8329942)
chr7 (261-381)||(8343580-8343700)
chr7 (261-339)||(8329799-8329877)
chr7 (187-382)||(20570662-20570870)
chr7 (261-343)||(21846263-21846345)
chr7 (260-329)||(8346361-8346430)
chr7 (272-341)||(17741886-17741955)
chr7 (262-344)||(7730174-7730256)
chr7 (262-351)||(5715517-5715606)
chr7 (261-381)||(8346244-8346364)
chr7 (303-383)||(10285679-10285759)
chr7 (260-327)||(4247586-4247653)
chr7 (268-383)||(17811586-17811701)
chr7 (152-264)||(8254028-8254143)
chr7 (268-382)||(8304324-8304438)
chr7 (151-243)||(8629670-8629761)
chr7 (180-264)||(4247493-4247576)
chr7 (180-264)||(17811484-17811568)
chr7 (271-383)||(23618205-23618317)
chr7 (68-185)||(24915791-24915908)
chr7 (180-223)||(5715426-5715469)
chr7 (180-231)||(24725418-24725469)
chr7 (262-324)||(24725307-24725369)
chr7 (180-225)||(14055388-14055433)
chr7 (180-225)||(14365416-14365461)
chr7 (307-356)||(17808995-17809044)
chr7 (262-327)||(24989606-24989670)
chr7 (180-233)||(24990010-24990063)
chr7 (262-338)||(27509228-27509309)
chr7 (282-383)||(48621431-48621532)
chr7 (206-262)||(4574879-4574935)
chr7 (268-344)||(11325216-11325292)
chr7 (297-341)||(27221681-27221725)
chr7 (302-341)||(7307204-7307243)
chr7 (13-56)||(24990096-24990139)
chr7 (185-243)||(7307140-7307197)
chr7 (151-224)||(8304178-8304252)
chr7 (70-116)||(23618594-23618640)
chr7 (72-138)||(25842884-25842950)
chr7 (180-226)||(26281256-26281302)
chr7 (180-222)||(27221555-27221597)
chr7 (304-341)||(8254002-8254039)
chr7 (297-329)||(5058628-5058660)
chr7 (297-341)||(9685112-9685156)
chr7 (297-329)||(22687662-22687694)
chr7 (297-329)||(27221517-27221549)
[»] chr3 (60 HSPs)
chr3 (1-381)||(27676405-27676787)
chr3 (262-383)||(17064539-17064660)
chr3 (2-221)||(10872816-10873025)
chr3 (81-383)||(17796605-17796918)
chr3 (81-383)||(19105045-19105358)
chr3 (262-383)||(25870098-25870219)
chr3 (263-383)||(3449086-3449206)
chr3 (180-383)||(42696984-42697200)
chr3 (261-380)||(6136348-6136467)
chr3 (261-383)||(10872491-10872613)
chr3 (261-383)||(13286175-13286297)
chr3 (254-383)||(8592175-8592304)
chr3 (262-383)||(28135994-28136115)
chr3 (277-383)||(41671426-41671532)
chr3 (151-264)||(6861048-6861163)
chr3 (271-383)||(9152762-9152873)
chr3 (261-381)||(22137508-22137628)
chr3 (152-264)||(19348648-19348760)
chr3 (153-242)||(18014089-18014177)
chr3 (1-198)||(15806409-15806586)
chr3 (152-264)||(22970903-22971016)
chr3 (180-351)||(28745913-28746097)
chr3 (263-383)||(8155905-8156025)
chr3 (261-377)||(21963662-21963778)
chr3 (261-377)||(21986098-21986214)
chr3 (180-264)||(39428039-39428123)
chr3 (165-264)||(9169782-9169880)
chr3 (165-243)||(8592341-8592421)
chr3 (189-240)||(27055255-27055306)
chr3 (268-325)||(24620031-24620088)
chr3 (254-383)||(27090666-27090795)
chr3 (151-218)||(8566180-8566248)
chr3 (199-243)||(10591788-10591832)
chr3 (180-236)||(15515192-15515248)
chr3 (204-264)||(15806292-15806352)
chr3 (94-183)||(24649597-24649686)
chr3 (69-116)||(3041197-3041244)
chr3 (185-264)||(23649368-23649447)
chr3 (271-341)||(3041464-3041534)
chr3 (275-341)||(22971054-22971120)
chr3 (180-226)||(24620146-24620192)
chr3 (22-116)||(26234889-26234983)
chr3 (200-264)||(6136478-6136540)
chr3 (268-341)||(8560275-8560348)
chr3 (274-383)||(15515034-15515143)
chr3 (298-383)||(15806224-15806309)
chr3 (262-327)||(20756254-20756319)
chr3 (199-264)||(25870231-25870295)
chr3 (297-341)||(19348820-19348864)
chr3 (303-383)||(20766677-20766757)
chr3 (69-116)||(20767443-20767490)
chr3 (69-116)||(22970725-22970772)
chr3 (297-351)||(13006092-13006146)
chr3 (297-327)||(18014258-18014288)
chr3 (193-264)||(21553814-21553888)
chr3 (180-226)||(22494734-22494780)
chr3 (72-116)||(24263376-24263421)
chr3 (1-78)||(28135771-28135848)
chr3 (304-353)||(30727665-30727714)
chr3 (297-329)||(8156128-8156160)
[»] chr5 (47 HSPs)
chr5 (151-351)||(24648124-24648330)
chr5 (81-383)||(43005635-43005953)
chr5 (167-323)||(26021444-26021612)
chr5 (151-241)||(19377706-19377798)
chr5 (262-383)||(27339963-27340084)
chr5 (151-264)||(41427512-41427626)
chr5 (153-243)||(30804032-30804122)
chr5 (151-264)||(15446304-15446419)
chr5 (180-264)||(18843852-18843935)
chr5 (151-231)||(22984755-22984837)
chr5 (255-383)||(13341473-13341601)
chr5 (262-337)||(21058978-21059054)
chr5 (151-198)||(13349509-13349556)
chr5 (151-230)||(30799499-30799578)
chr5 (268-383)||(41427657-41427772)
chr5 (206-264)||(9996892-9996950)
chr5 (265-351)||(19377838-19377924)
chr5 (151-243)||(187814-187907)
chr5 (271-383)||(16417218-16417328)
chr5 (180-264)||(19579079-19579163)
chr5 (268-351)||(41688474-41688557)
chr5 (83-141)||(26021395-26021453)
chr5 (262-324)||(43235100-43235162)
chr5 (262-351)||(19042236-19042325)
chr5 (262-322)||(38158101-38158161)
chr5 (275-341)||(15051915-15051981)
chr5 (255-317)||(22984643-22984705)
chr5 (69-138)||(4289918-4289987)
chr5 (195-264)||(15052013-15052081)
chr5 (180-225)||(19979736-19979781)
chr5 (268-324)||(19579181-19579237)
chr5 (180-264)||(20321079-20321163)
chr5 (180-264)||(23172337-23172420)
chr5 (68-115)||(15445860-15445907)
chr5 (298-341)||(15446402-15446445)
chr5 (253-324)||(15446435-15446506)
chr5 (268-351)||(18843953-18844036)
chr5 (151-218)||(29270237-29270303)
chr5 (256-338)||(9996790-9996872)
chr5 (262-324)||(20321175-20321237)
chr5 (187-264)||(21059066-21059141)
chr5 (69-119)||(29269774-29269824)
chr5 (280-329)||(17624851-17624900)
chr5 (297-350)||(22645536-22645589)
chr5 (180-264)||(41688575-41688657)
chr5 (315-383)||(19979853-19979921)
chr5 (262-322)||(23172265-23172325)
[»] chr2 (53 HSPs)
chr2 (94-327)||(25538977-25539224)
chr2 (95-264)||(19491983-19492153)
chr2 (151-344)||(16766894-16767100)
chr2 (151-383)||(19245690-19245942)
chr2 (151-344)||(27406898-27407106)
chr2 (99-264)||(5395431-5395596)
chr2 (1-264)||(31023272-31023522)
chr2 (151-264)||(41002119-41002232)
chr2 (151-264)||(974431-974545)
chr2 (168-264)||(34841705-34841801)
chr2 (17-116)||(5395613-5395712)
chr2 (151-383)||(8428332-8428575)
chr2 (151-264)||(21869243-21869357)
chr2 (73-266)||(15627771-15627966)
chr2 (208-383)||(13502450-13502638)
chr2 (262-383)||(20063955-20064076)
chr2 (187-344)||(35565769-35565939)
chr2 (152-264)||(34577986-34578096)
chr2 (152-264)||(20034144-20034255)
chr2 (153-237)||(26251621-26251708)
chr2 (154-264)||(7301884-7301994)
chr2 (262-341)||(19262134-19262213)
chr2 (262-350)||(1405015-1405103)
chr2 (73-190)||(13502947-13503063)
chr2 (180-382)||(15588632-15588842)
chr2 (160-243)||(27524038-27524122)
chr2 (261-337)||(29661100-29661176)
chr2 (268-327)||(974576-974635)
chr2 (156-260)||(24473931-24474037)
chr2 (271-341)||(20034040-20034110)
chr2 (271-341)||(27523914-27523984)
chr2 (180-264)||(31237885-31237969)
chr2 (180-236)||(31578141-31578197)
chr2 (17-116)||(8428207-8428306)
chr2 (312-383)||(34167571-34167641)
chr2 (69-116)||(34577808-34577855)
chr2 (271-341)||(7302023-7302093)
chr2 (253-383)||(21869097-21869227)
chr2 (70-119)||(19257490-19257539)
chr2 (151-221)||(27749713-27749785)
chr2 (270-327)||(36430088-36430145)
chr2 (297-365)||(23863283-23863351)
chr2 (268-380)||(31237755-31237867)
chr2 (2-57)||(13503066-13503121)
chr2 (333-383)||(5434160-5434210)
chr2 (277-339)||(15627991-15628053)
chr2 (1-51)||(16766759-16766809)
chr2 (199-241)||(19519529-19519571)
chr2 (262-324)||(30433047-30433109)
chr2 (292-344)||(16767184-16767237)
chr2 (297-329)||(31237975-31238007)
chr2 (298-334)||(34841784-34841820)
chr2 (180-264)||(36429985-36430068)
[»] chr6 (56 HSPs)
chr6 (1-264)||(4841738-4841999)
chr6 (180-380)||(23897948-23898160)
chr6 (151-243)||(31407401-31407495)
chr6 (151-264)||(18490548-18490661)
chr6 (162-264)||(20399995-20400099)
chr6 (260-383)||(30912182-30912305)
chr6 (166-243)||(5422589-5422665)
chr6 (268-341)||(20432411-20432484)
chr6 (1-186)||(18490780-18490965)
chr6 (151-264)||(33593072-33593187)
chr6 (152-243)||(27890480-27890573)
chr6 (262-383)||(11327338-11327459)
chr6 (262-383)||(19748565-19748686)
chr6 (151-264)||(20432515-20432629)
chr6 (262-367)||(2912053-2912158)
chr6 (262-383)||(7223747-7223868)
chr6 (262-351)||(15527918-15528007)
chr6 (255-380)||(33592930-33593054)
chr6 (94-197)||(3573866-3573969)
chr6 (151-243)||(7621909-7622004)
chr6 (180-381)||(26053074-26053288)
chr6 (180-381)||(26073127-26073341)
chr6 (185-240)||(645415-645470)
chr6 (262-327)||(3573732-3573797)
chr6 (262-383)||(17103427-17103548)
chr6 (153-242)||(31108252-31108341)
chr6 (255-383)||(27890611-27890739)
chr6 (1-104)||(5422725-5422828)
chr6 (297-383)||(21354942-21355028)
chr6 (298-375)||(18490488-18490565)
chr6 (262-327)||(22498272-22498337)
chr6 (273-329)||(4841659-4841715)
chr6 (304-344)||(10508846-10508886)
chr6 (269-341)||(17543548-17543620)
chr6 (180-236)||(30912348-30912404)
chr6 (180-223)||(7223649-7223692)
chr6 (187-264)||(7918259-7918333)
chr6 (180-231)||(15528051-15528102)
chr6 (180-231)||(17543681-17543732)
chr6 (180-231)||(21354877-21354928)
chr6 (266-329)||(33583497-33583559)
chr6 (151-198)||(7857099-7857148)
chr6 (5-55)||(17543766-17543816)
chr6 (1-39)||(18491079-18491117)
chr6 (271-321)||(28669544-28669594)
chr6 (297-379)||(31108422-31108504)
chr6 (274-381)||(1179068-1179177)
chr6 (262-327)||(7918182-7918247)
chr6 (1-42)||(18491000-18491041)
chr6 (280-341)||(23506092-23506153)
chr6 (151-184)||(28669422-28669455)
chr6 (304-341)||(31108351-31108388)
chr6 (297-329)||(7223611-7223643)
chr6 (297-329)||(23897910-23897942)
chr6 (319-383)||(24209480-24209544)
chr6 (297-381)||(27614434-27614518)
[»] scaffold0603 (2 HSPs)
scaffold0603 (151-377)||(8741-8981)
scaffold0603 (1-52)||(9049-9100)
[»] chr1 (52 HSPs)
chr1 (94-327)||(17055751-17055997)
chr1 (72-264)||(18891503-18891697)
chr1 (180-382)||(47785996-47786209)
chr1 (262-382)||(32881552-32881672)
chr1 (81-264)||(27917281-27917462)
chr1 (262-383)||(41032549-41032670)
chr1 (268-383)||(25146544-25146659)
chr1 (156-243)||(12002801-12002890)
chr1 (269-383)||(30619181-30619293)
chr1 (262-383)||(21846050-21846171)
chr1 (254-350)||(16434733-16434829)
chr1 (261-383)||(13100421-13100543)
chr1 (180-327)||(16125287-16125447)
chr1 (152-264)||(17197450-17197562)
chr1 (151-244)||(24117602-24117695)
chr1 (180-264)||(42179973-42180057)
chr1 (277-383)||(12513518-12513624)
chr1 (169-231)||(16446700-16446762)
chr1 (262-383)||(14074259-14074380)
chr1 (158-218)||(18337239-18337300)
chr1 (1-78)||(18337525-18337602)
chr1 (262-327)||(23528888-23528953)
chr1 (262-329)||(18304641-18304708)
chr1 (180-383)||(9351839-9352055)
chr1 (262-360)||(19009747-19009845)
chr1 (187-264)||(13276175-13276251)
chr1 (265-329)||(21242857-21242921)
chr1 (180-264)||(25146678-25146761)
chr1 (297-351)||(9954841-9954895)
chr1 (262-315)||(13276112-13276163)
chr1 (297-383)||(42179847-42179933)
chr1 (187-264)||(18304720-18304796)
chr1 (297-341)||(9321553-9321597)
chr1 (5-53)||(13100244-13100292)
chr1 (11-55)||(23528715-23528759)
chr1 (268-327)||(8773506-8773565)
chr1 (268-359)||(39845055-39845146)
chr1 (5-56)||(41032695-41032746)
chr1 (268-350)||(9128647-9128729)
chr1 (291-329)||(17055997-17056035)
chr1 (151-185)||(39845218-39845252)
chr1 (151-221)||(8773066-8773138)
chr1 (188-264)||(9954942-9955019)
chr1 (208-264)||(16434674-16434731)
chr1 (297-350)||(17869559-17869612)
chr1 (297-329)||(9327213-9327245)
chr1 (297-329)||(9955033-9955065)
chr1 (297-329)||(12513380-12513412)
chr1 (274-382)||(17197306-17197414)
chr1 (81-141)||(18337472-18337532)
chr1 (297-329)||(19009944-19009976)
chr1 (188-236)||(21846210-21846258)
[»] chr8 (49 HSPs)
chr8 (151-264)||(26575032-26575147)
chr8 (158-367)||(15761150-15761375)
chr8 (261-383)||(29384088-29384210)
chr8 (262-383)||(17647229-17647350)
chr8 (180-383)||(6810958-6811172)
chr8 (262-383)||(15231853-15231974)
chr8 (155-264)||(1018090-1018199)
chr8 (151-375)||(17566217-17566443)
chr8 (187-351)||(45403173-45403350)
chr8 (261-344)||(22910018-22910101)
chr8 (262-381)||(24056348-24056467)
chr8 (187-383)||(23142319-23142527)
chr8 (268-383)||(7489059-7489174)
chr8 (262-383)||(31424399-31424517)
chr8 (153-264)||(8582153-8582263)
chr8 (180-383)||(11879737-11879953)
chr8 (180-383)||(11897153-11897369)
chr8 (151-236)||(40541770-40541856)
chr8 (153-241)||(16752119-16752208)
chr8 (262-327)||(24414119-24414184)
chr8 (302-382)||(11973942-11974022)
chr8 (261-324)||(15294900-15294963)
chr8 (261-324)||(15475269-15475332)
chr8 (81-136)||(24056523-24056578)
chr8 (278-384)||(3094019-3094125)
chr8 (180-264)||(3094151-3094235)
chr8 (5-56)||(3094278-3094329)
chr8 (262-321)||(5922280-5922339)
chr8 (271-341)||(2040360-2040430)
chr8 (189-264)||(29384221-29384300)
chr8 (265-383)||(40541596-40541714)
chr8 (258-327)||(16752251-16752320)
chr8 (275-328)||(26574948-26575001)
chr8 (262-327)||(32424566-32424631)
chr8 (180-264)||(27836373-27836456)
chr8 (9-56)||(31424220-31424267)
chr8 (269-367)||(19704249-19704347)
chr8 (297-327)||(27836131-27836161)
chr8 (274-351)||(7262006-7262083)
chr8 (5-54)||(11879653-11879702)
chr8 (5-54)||(11897069-11897118)
chr8 (69-138)||(16751932-16752000)
chr8 (298-383)||(26879778-26879863)
chr8 (297-329)||(3094251-3094283)
chr8 (297-341)||(6292227-6292271)
chr8 (187-231)||(7489224-7489268)
chr8 (81-141)||(15761391-15761451)
chr8 (297-329)||(29384207-29384239)
chr8 (297-329)||(45403128-45403160)
[»] scaffold0048 (7 HSPs)
scaffold0048 (1-190)||(48680-48868)
scaffold0048 (1-141)||(61323-61463)
scaffold0048 (261-329)||(61144-61212)
scaffold0048 (264-324)||(48497-48557)
scaffold0048 (156-217)||(48616-48679)
scaffold0048 (156-187)||(61268-61299)
scaffold0048 (215-263)||(48572-48620)
[»] scaffold0115 (2 HSPs)
scaffold0115 (151-259)||(34903-35011)
scaffold0115 (85-119)||(35039-35073)
[»] scaffold0534 (1 HSPs)
scaffold0534 (151-375)||(789-1015)
[»] scaffold0036 (2 HSPs)
scaffold0036 (1-138)||(37110-37246)
scaffold0036 (159-205)||(37057-37103)
[»] scaffold0042 (3 HSPs)
scaffold0042 (261-380)||(93483-93603)
scaffold0042 (297-329)||(93600-93632)
scaffold0042 (297-329)||(93704-93736)
[»] scaffold0028 (1 HSPs)
scaffold0028 (255-383)||(145813-145941)
[»] scaffold0510 (1 HSPs)
scaffold0510 (262-344)||(19-100)
[»] scaffold1178 (1 HSPs)
scaffold1178 (151-264)||(428-542)
[»] scaffold0017 (2 HSPs)
scaffold0017 (153-241)||(38475-38565)
scaffold0017 (254-383)||(38303-38431)
[»] scaffold0027 (2 HSPs)
scaffold0027 (152-241)||(133059-133149)
scaffold0027 (271-327)||(132947-133003)
[»] scaffold0016 (1 HSPs)
scaffold0016 (262-383)||(56201-56322)
[»] scaffold0001 (1 HSPs)
scaffold0001 (151-240)||(142724-142814)
[»] scaffold0684 (2 HSPs)
scaffold0684 (151-236)||(5161-5247)
scaffold0684 (69-138)||(5554-5623)
[»] scaffold0150 (1 HSPs)
scaffold0150 (265-338)||(33173-33246)
[»] scaffold0186 (1 HSPs)
scaffold0186 (180-327)||(8580-8738)
[»] scaffold0061 (1 HSPs)
scaffold0061 (190-241)||(76257-76308)
[»] scaffold0417 (1 HSPs)
scaffold0417 (262-341)||(7273-7352)
[»] scaffold0259 (1 HSPs)
scaffold0259 (197-264)||(18537-18604)
[»] scaffold0163 (2 HSPs)
scaffold0163 (151-236)||(2871-2957)
scaffold0163 (69-138)||(2495-2564)
[»] scaffold0079 (2 HSPs)
scaffold0079 (271-341)||(14744-14814)
scaffold0079 (69-116)||(15021-15068)
[»] scaffold0182 (1 HSPs)
scaffold0182 (69-118)||(24299-24348)
[»] scaffold0007 (1 HSPs)
scaffold0007 (298-341)||(220435-220478)
[»] scaffold0526 (1 HSPs)
scaffold0526 (187-264)||(8288-8363)


Alignment Details
Target: chr4 (Bit Score: 311; Significance: 1e-175; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 3 - 402
Target Start/End: Complemental strand, 18459786 - 18459388
Alignment:
Q  3 tattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatacaa 102  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18459786 tattcactttcaacgactcaaatccatagcagaatcctaaaataggcaaaatcctagtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatacaa 18459687  T
Q  103 aattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatttatgattat 202  Q
    |||||||||||||||||||||||| ||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  18459686 aattgcaggattttaaacggttttgaaggattttgtccatttttgtaatcatttatgtataagtattttgtggactttaaaccgagtcatttatgactat 18459587  T
Q  203 atacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatttcttatatcgattctacaaaattagttaagtcaaatcc 302  Q
    ||||| || |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18459586 atacagttcataacatatatttagcgttacttttgttttggcaaag-ccatcgattttgatttcttatatcaattctacaaaattagttaagtcaaatcc 18459488  T
Q  303 ttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacctcgtctaagatcaatatatt 402  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  18459487 ttcgattttaattgcgattttacgattgtcgattttgctctttcctttcaacctgaagcaaaatctcgattttgacaaccttgtctaagatcaatatatt 18459388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 383
Target Start/End: Original strand, 7452469 - 7452858
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||| ||||||||||||| |||||||  || |||||| ||||||||||||||  |||||   | || |||||||||||||||||||||| |||||    
T  7452469 tttattcaccttcaacgactcaa-tccatagtggattcctaatataggcaaaatcctaataaaatcgcttctaaatcgcacaaaatcgtgaaatacatac 7452567  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgtcc-annnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatttatgat 199  Q
    ||||||||||||||||||| |||||| |||||  |||||| |         |||||| ||||||||| ||||||||| |||||||||||||||||         
T  7452568 aaaattgcaggattttaaagggttttgaagga--ttgtccaatttttttggtcatttttgtataagtgttttgtggaatttaaactgagtcattt----c 7452661  T
Q  200 tatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgatttt--------------gatttcttatatcgattctacaaaa 285  Q
    |||||| ||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||              |||||| ||||| ||||||||||||    
T  7452662 tatatagaatttataacatatattaagcattatttttgttttgacaaaatccatcgattttagttgtgcttttacgatttcgtatattgattctacaaaa 7452761  T
Q  286 ttagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
     ||||| ||| ||||||||||||||||||||||||||||||||| || | ||| ||||| |||||| |  |||||||||||| | |||||||||||||    
T  7452762 gtagttgagt-aaatccttcgattttgattgcgattttacgattttcaacttttctcttccctttcgacctgaagcaaaatcctaattttgacaacct 7452858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 94 - 341
Target Start/End: Complemental strand, 8011214 - 8010954
Alignment:
Q  94 ttcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatt 193  Q
    |||| ||||||| ||||||||||||| |||||| ||| |||||||| |       | ||||||||||||||||||||||||||||||||||| | |||||    
T  8011214 ttcaaacaaaatcgcaggattttaaagggttttgaagaattttgtc-atttctttattcatttatgtataagtattttgtggactttaaactaattcatt 8011116  T
Q  194 tatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------atttcttatatcgattct 279  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||||| ||| | |||||||||||              ||||||||||||||||||    
T  8011115 tataattatatacaatttataacatatatttagcattatttttgttttggtaaaatacatcgattttgattgcgattttacaatttcttatatcgattct 8011016  T
Q  280 acaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    | |||| ||||| ||| ||||||||||||||||||||||||||||||| |  ||||||||||    
T  8011015 ataaaaatagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgct 8010954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 11 - 383
Target Start/End: Original strand, 10394569 - 10394963
Alignment:
Q  11 ttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatacaaaattgcag 110  Q
    |||||||||| |||| |||||  ||||  ||| |||||||| |||||||||||| | ||| |||||||||||||||| | |||| ||| |||||| ||||    
T  10394569 ttcaacgacttaaattcatagtagaattttaaaataggcaagatccttgtaaaattgcattaaaatcgcacaaaatcattaaatccattcaaaatcgcag 10394668  T
Q  111 gattttaaacggtttttaaggattttgtccannnnnnn-aatcatttatgtataagtattttgtggactttaaactgagtcatttatgatt--------a 201  Q
    |||||||||  ||||| ||||||||  |||         ||||||||||||||||| |||||||| | ||||||| |||||||||||  ||        |    
T  10394669 gattttaaagagttttgaaggatttcttcctcttttattaatcatttatgtataagaattttgtgaattttaaacggagtcatttatttttgggaggtaa 10394768  T
Q  202 tatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgatttt-------------gatttcttatatcgattctacaaaatta 288  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||              |||||| |||| ||||||||||||| ||    
T  10394769 tatacaatttataacatatatttaccattatttttgttttggtaatatccatcgatttgattgtaattttacgatttcctataccgattctacaaaagta 10394868  T
Q  289 gttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    ||| ||| || |||||||||||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||||    |||||||||||||    
T  10394869 gttgagtaaagtccttcgattttgattgcgattttacgatttttgattttgctctttcttttcaacttgaagcaaaattccaattttgacaacct 10394963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 151 - 384
Target Start/End: Complemental strand, 9149745 - 9149497
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||| |||| |||||| ||| ||    
T  9149745 tcatttatgtataagtattttttggactttaagctgagtcatttataactatatacaatttataacatatatttagcattatttttcttttggtaaaatc 9149646  T
Q  251 catcgatttt---------------gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgat 335  Q
     ||| |||||               ||||||||||||||||||||| ||| ||||| ||| ||||||||| ||||||||||  ||||||| ||| | |||    
T  9149645 tatcaattttgattgcgttttttacgatttcttatatcgattctacgaaagtagttgagtaaaatccttcaattttgattggaattttacaattttagat 9149546  T
Q  336 tttgctctttcctttcaatttgaagcaaaatcttgattttgacaacctc 384  Q
    || ||||||||||||| |  | ||||||||| |||||||||||| ||||    
T  9149545 ttcgctctttcctttcgacctaaagcaaaatattgattttgacaccctc 9149497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 4156812 - 4157072
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||| || |||||||||||||  |||  ||||||||| ||| |||||||| | ||||||   |||||||||| |||||| | ||||||| |||||    
T  4156812 tttattcacctttaacgactcaaatctgtagtagaatcctaaaataagcaaaatcttagtaaaatcgcatcaaaatcacacaaatt-gtgaaatacatac 4156910  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatttatgatt 200  Q
    ||||| ||| ||||||||| | |||| ||||||||||||||       | |||||||||||||||||||||||| ||||||||| || |||||||| | |    
T  4156911 aaaatcgcaagattttaaaggattttgaaggattttgtccatttttt-attcatttatgtataagtattttgtgaactttaaaccgaatcatttatcact 4157009  T
Q  201 atatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||| |||||||||||||| | ||||| ||||||||| | ||| ||||||||||||||||    
T  4157010 atatacaa-ttataacatatattcaacattatttttgttttagtaaaatccatcgattttgatt 4157072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 160 - 383
Target Start/End: Complemental strand, 6346968 - 6346731
Alignment:
Q  160 tataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattt 259  Q
    ||||| |||||| | |||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||||||  || |||||||||||    
T  6346968 tataactattttctagactttaacctgagtcatttatgcatatatacaatttataacatatatttatcattatttttgttttggtgaaatccatcgattt 6346869  T
Q  260 tgatt--------------tcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctcttt 345  Q
    |||||              ||||||||  ||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||| ||||||||||||||     
T  6346868 tgattgcgattttacaatttcttatattcattctacaaaagtagttgagtaaaatccttcgattttgattgtgattttacgattttcgattttgctcttc 6346769  T
Q  346 cctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    |||||| |  ||||||||| |   ||||||||||||||    
T  6346768 cctttcgacctgaagcaaatttccgattttgacaacct 6346731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 160 - 351
Target Start/End: Complemental strand, 5943259 - 5943067
Alignment:
Q  160 tataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacat-atatttagcattacttttgttttggcaaagtccatcgatt 258  Q
    ||||||||||||||| ||||||||||  ||||||||||| |||| |  ||||||||||| ||||||| ||||| |||| |||||| ||| ||||||||||    
T  5943259 tataagtattttgtgcactttaaactttgtcatttatgactataaa--atttataacattatatttaacattatttttattttggtaaaatccatcgatt 5943162  T
Q  259 tt--gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    ||  ||||||||| | ||||||||||||| ||||| ||| ||||||||| |||||  |||||||||||||||| | |||||||||||| ||||||    
T  5943161 ttacgatttcttaaaccgattctacaaaagtagttgagtaaaatccttcaattttacttgcgattttacgatttttgattttgctcttccctttc 5943067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 151 - 324
Target Start/End: Original strand, 7044870 - 7045057
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| | ||||||||| |||||||| || |||| ||||| ||||||||||| ||| ||    
T  7044870 tcatttatgtataagtatcttgtcgactttaaactgagtcatttatcactatatacaaattataacacatgtttaacattatttttgttttggtaaaatc 7044969  T
Q  251 catcgatttt--------------gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttta 324  Q
    ||||||||||              ||||||||||||||||| | ||||| ||||| ||| ||||| ||||||||||||||||||||||    
T  7044970 catcgattttgattgatattttacgatttcttatatcgattattcaaaagtagttgagtaaaatcattcgattttgattgcgatttta 7045057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 7825157 - 7825237
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcatta 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  7825157 tcatttatgtataagtattttgtggactttaaactgagtcatttatgactatatacaatttataacttgtatttagcatta 7825237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 351
Target Start/End: Original strand, 7045058 - 7045265
Alignment:
Q  160 tataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattt 259  Q
    ||||||||| || | |||||||||||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||||||| ||  ||||| |||||    
T  7045058 tataagtatcttatcgactttaaactgagtcatttatcactatatacaaattataacatatatttaacattatttttgttttggtaagatccatagattt 7045157  T
Q  260 t--------------gatttcttata--tcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctct 343  Q
    |              |||||||||||  ||||||||  ||||  |||| ||| |||||||||||||||||||||||||||| |||| | |||||||||||    
T  7045158 tgattgatattttacgatttcttatatctcgattcttgaaaagcagttgagtaaaatccttcgattttgattgcgattttatgatttttgattttgctct 7045257  T
Q  344 ttcctttc 351  Q
    | ||||||    
T  7045258 tccctttc 7045265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 344
Target Start/End: Original strand, 37240476 - 37240553
Alignment:
Q  267 ttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctt 344  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37240476 ttatatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgatttagctctt 37240553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 7815754 - 7815819
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataac 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  7815754 tcatttatgtataagtattatgtggactttaaactgagtcatttatgactatatacaatttataac 7815819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 187 - 341
Target Start/End: Original strand, 10143043 - 10143211
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt--------------tcttatat 272  Q
    |||||||||||| ||||||| | |||||| |||||||||| |||| |||| |||||  ||| |||||| |||||||||              ||||||||    
T  10143043 agtcatttatgactatataccaattataatatatatttagtattattttttttttgataaaatccatcaattttgattgcgattttacaatctcttatat 10143142  T
Q  273 cgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||  ||||||||    
T  10143143 cgattctacaaaattagttgaataaaatccttcgattttgattgcgattttacgattgttaattttgct 10143211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 7803203 - 7803263
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaattt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7803203 tcatttatgtataagtattttgtggactttaaactgagtcatttatgactatatacaattt 7803263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 149 - 264
Target Start/End: Original strand, 55476080 - 55476195
Alignment:
Q  149 aatcatttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaa 247  Q
    ||||||||||||||| |||||||||| ||||| ||||  |||||||||||| ||||| ||||||||||||||||||| |||||| ||||||||||| | |    
T  55476080 aatcatttatgtatatgtattttgtgtactttgaactttagtcatttatgactatatgcaatttataacatatattttgcattatttttgttttggtaga 55476179  T
Q  248 gtccatcgattttgatt 264  Q
     ||| ||||||||||||    
T  55476180 atcc-tcgattttgatt 55476195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 6347084 - 6347015
Alignment:
Q  72 aaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtcca 141  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||    
T  6347084 aaaatcgcacaaaatcgtgaaattcacacaaaatcgcaggattttaaagggttttgaaggattttgtcca 6347015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 191 - 383
Target Start/End: Original strand, 24719722 - 24719921
Alignment:
Q  191 atttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgatttt--------------gatttcttatatcgat 276  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| |||   ||||||||||              ||||||||||||||||    
T  24719722 atttatgactatatacaatttataacatatatttaacattatttttgctttggtaaaactcatcgattttgattgcgattttacgatttcttatatcgat 24719821  T
Q  277 tctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttg 376  Q
    ||||||||| || |  ||| ||||||||||||| ||||| |||||||       |||||||||||||| |||||| |  ||||||||||||| |||||||    
T  24719822 tctacaaaagtaatcgagtaaaatccttcgattgtgatttcgatttt-------tcgattttgctcttccctttcgacctgaagcaaaatctcgattttg 24719914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 5361863 - 5361780
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctt 344  Q
    |||||| |||||||||||||||||| ||||| ||| ||| |||||||||||| |||| |||||||||||||| |||||||||||    
T  5361863 gatttcatatatcgattctacaaaagtagttgagtaaaacccttcgattttgtttgcaattttacgattgtctattttgctctt 5361780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 8743801 - 8743708
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttg 242  Q
    ||||||||||| ||||||||||| |||||||||||  ||||||||||||| |||  |||||||| |||||||||||| ||||| ||||||||||    
T  8743801 tcatttatgtacaagtattttgtagactttaaactttgagtcatttatgactatgaacaatttaaaacatatatttaacattatttttgttttg 8743708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 18403639 - 18403728
Alignment:
Q  155 ttatgtataagtattttgtggactttaaact-gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    |||||||||  ||||||||||||||| || | |||||||| |||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  18403639 ttatgtatatttattttgtggactttgaatttgagtcattcatgactatatacaatttataacatatatttaacattatttttgttttgg 18403728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 383
Target Start/End: Original strand, 8889462 - 8889569
Alignment:
Q  275 attctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattt 374  Q
    ||||||||||| ||||| ||| | |||||||||||||| |||||||||||| |||||| |||||||||| | ||||| |  ||||||||||||  |||||    
T  8889462 attctacaaaagtagttgagtaagatccttcgattttggttgcgattttacaattgtcaattttgctctct-ctttcgacctgaagcaaaatcccgattt 8889560  T
Q  375 tgacaacct 383  Q
    |||||||||    
T  8889561 tgacaacct 8889569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 22060753 - 22060666
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattactttt 236  Q
    ||||||||||||||||||||||||||||| |||||  ||  ||||||||| || ||||||||||| ||||||||||||||||| ||||    
T  22060753 tcatttatgtataagtattttgtggacttgaaactttgatacatttatgactacatacaatttattacatatatttagcattattttt 22060666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 377
Target Start/End: Original strand, 4157269 - 4157377
Alignment:
Q  272 tcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttac---gattgtcgattttgctctttcctttcaatttgaagcaaaatct 368  Q
    |||||||||||||| ||||| ||| ||||| |||||| ||||||||||||||||   |||| |||||||||||||| |||||| | || ||||||||||     
T  4157269 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgacttaaagcaaaatcc 4157368  T
Q  369 tgattttga 377  Q
     ||||||||    
T  4157369 cgattttga 4157377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 377
Target Start/End: Original strand, 4157556 - 4157664
Alignment:
Q  272 tcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttac---gattgtcgattttgctctttcctttcaatttgaagcaaaatct 368  Q
    |||||||||||||| ||||| ||| ||||| |||||| ||||||||||||||||   |||| |||||||||||||| |||||| | || ||||||||||     
T  4157556 tcgattctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgacttaaagcaaaatcc 4157655  T
Q  369 tgattttga 377  Q
     ||||||||    
T  4157656 cgattttga 4157664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 379
Target Start/End: Complemental strand, 9911403 - 9911191
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------attt 265  Q
    |||||| |||||||||||| ||||||| |||||||||||||||| || |||| || | |||||| |||||||||||||||||              ||||    
T  9911403 taaactaagtcatttatgactatataccatttataacatatattaagtatta-ttattttttggtaaagtccatcgattttgattgcgattttacaattt 9911305  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
    |||||||||||||||||||| |  |  ||| |||||||||| |||| ||||||||||||||| |  ||||||| || || |||||| || ||||| |||     
T  9911304 cttatatcgattctacaaaagttctcgagtaaaatccttcgttttttattgcgattttacgagtcccgattttactattccctttcgatatgaagtaaag 9911205  T
Q  366 tcttgattttgaca 379  Q
    || | |||||||||    
T  9911204 tcctaattttgaca 9911191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 17466216 - 17466391
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt--------------t 265  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||  |||| |||| | |||  ||| ||||||||||||||||              |    
T  17466216 taaactaagtcatttatgactatataccatttataacatatatttaatattatttttttgttgtaaaa-tccatcgattttgattgcaattttacaattt 17466314  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctc 342  Q
    ||||||||||||| |||||| ||||| |||  |||| ||| |||||| |||| ||||||||||||||||||||||||    
T  17466315 cttatatcgattccacaaaagtagttgagtataatctttcaattttgtttgcaattttacgattgtcgattttgctc 17466391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 5846106 - 5846050
Alignment:
Q  185 tgagtcatttatgattatatacaatttataacatatatttagcattacttttgtttt 241  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  5846106 tgagtcatttatgacaatatacaatttataacatatatttagcattatttttgtttt 5846050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 8409723 - 8409801
Alignment:
Q  185 tgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||| ||||||||||| | | ||| ||||||||||||    
T  8409723 tgagtcatttatgactatatgtaatttataacatatatttagcattatttttgttttggtagaatcc-tcgattttgatt 8409801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 55476223 - 55476285
Alignment:
Q  265 tcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||||||||||||||||||| |  || ||| |||||||||||||||||||||||||||||||    
T  55476223 tcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 55476285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 5375801 - 5375885
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| ||||||||||||  |||||  ||||||||||||||||||| |||| |||| ||| || ||| ||||||||||||||||    
T  5375801 taaactaagtcatttatgaccatatatcatttataacatatatttagtattaattttttttgggtaaaatccatcgattttgatt 5375885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 5884277 - 5884202
Alignment:
Q  189 tcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    ||||||||||  |||| ||||||||||||||  |||||||||||||||||||| | ||| |||||| |||||||||    
T  5884277 tcatttatgacaatatgcaatttataacatacttttagcattacttttgtttttgtaaaatccatctattttgatt 5884202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7044776 - 7044839
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaa 64  Q
    ||||||||| |||||||||||||||||||||| |||||| || ||| |||||||||| ||||||    
T  7044776 tttattcaccttcaacgactcaaatccatagcagaatcccaaaataagcaaaatcctagtaaaa 7044839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 351
Target Start/End: Original strand, 9770350 - 9770433
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    ||||||||||||||||||    || ||| ||||||||||||||||||||||||||||||| |  |||||||||| || ||||||    
T  9770350 tatatcgattctacaaaagaccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttc 9770433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 24719566 - 24719695
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||| |||||||||||||||||||||| ||||||||| || ||  ||||||| ||           |||||||||| ||| |||||||| |||||    
T  24719566 tttattcaccttcaacgactcaaatccatagcagaatcctaaaatgggtgaaatcctagt-----------aaaatcgcacgaaaacgtgaaatacatac 24719654  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgtcca 141  Q
    ||||| ||||||||||||  || ||||||| ||| ||||||    
T  24719655 aaaatcgcaggattttaatgggcttttaagaattgtgtcca 24719695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 13023707 - 13023768
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgtttt 241  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||| |||| |||| ||||    
T  13023707 taaactaagtcatttatgactatataccatttataacatatatttagtattaattttttttt 13023768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 46664308 - 46664264
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactgagtcatttat 196  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  46664308 catttatgtataagtatgttgcggactttaaactgagtcatttat 46664264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 20812634 - 20812750
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaac--tgagtcatttatgattatatacaatttataaca--tatatttagcattacttttgttttggcaa 246  Q
    |||||||| |||||||||||||| ||||| ||||  |||||||||||||| ||||| || ||||||| |  |||||||||||||| |||| |||||| |     
T  20812634 tcatttatttataagtattttgtagacttgaaactttgagtcatttatgactatatgcactttataatatttatatttagcatta-ttttcttttggtag 20812732  T
Q  247 agtccatcgattttgatt 264  Q
    | ||| ||||| ||||||    
T  20812733 aatccttcgatcttgatt 20812750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 46664227 - 46664152
Alignment:
Q  306 gattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaac 381  Q
    |||||||||||||||||| ||||| ||||||||||| |||| |||| |  ||||||||||||   |||||||||||    
T  46664227 gattttgattgcgattttccgattttcgattttgctatttcttttcgacctgaagcaaaatcccaattttgacaac 46664152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 5361955 - 5361909
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttag 226  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||||    
T  5361955 taaactaagtcatttatgattatataccatttttaacatatatttag 5361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 384
Target Start/End: Complemental strand, 23064858 - 23064736
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||| |||||||||||||||||| |  || | | ||||||||| ||||||||||||||||||||| |  |||||| | | || |||||| |  |||||     
T  23064858 atttcctatatcgattctacaaaagtccttgaataaaatccttcaattttgattgcgattttacgagttccgatttcgttattccctttcgacctgaagt 23064759  T
Q  362 aaaatcttgattttgacaacctc 384  Q
    ||| ||  |||||||||||||||    
T  23064758 aaagtcccgattttgacaacctc 23064736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 36120968 - 36121043
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||| ||||||| |||||||| |||||||||| ||||  ||  |||||| ||| ||||||||||||||||    
T  36120968 agtcatttatgactatataccatttataaaatatatttagtatta--ttatttttggtaaaatccatcgattttgatt 36121043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 36121055 - 36121176
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||| ||||||||| |||||||| |  || ||| ||||| ||||||||||||| ||||||||||| |  |||||  ||| || |||||||| ||||||     
T  36121055 atttcctatatcgatactacaaaagtccttgagtaaaatctttcgattttgattccgattttacgagtcccgattaagctattccctttcaacttgaagt 36121154  T
Q  362 aaaatcttgattttgacaacct 383  Q
    |||  |  ||||||||||||||    
T  36121155 aaagacccgattttgacaacct 36121176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 5375903 - 5375962
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||| ||||||||| || |  || ||| |||||||||||||||||||||||||||||||    
T  5375903 tatatagattctacagaagtccttgagtaaaatccttcgattttgattgcgattttacga 5375962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 8020774 - 8020731
Alignment:
Q  200 tatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||    
T  8020774 tatatgcaatttataacatatatttaacattatttttgttttgg 8020731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 9770165 - 9770215
Alignment:
Q  5 ttcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatc 55  Q
    ||||| |||||||||||||||||||||  ||||||||| |||| |||||||    
T  9770165 ttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaaaatc 9770215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 8743656 - 8743583
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    |||||||||| ||||||  ||||| ||| ||||| ||||||||||||| |||| |||| ||| | |||||||||    
T  8743656 tatatcgattatacaaatgtagttgagtaaaatctttcgattttgattacgatgttactatttttgattttgct 8743583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 382
Target Start/End: Complemental strand, 22060611 - 22060526
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacc 382  Q
    |||||||||||||| ||||| |||||||  ||| | ||||||||| || ||||||||| | || |||||||  ||||| |||||||    
T  22060611 aaatccttcgatttcgattgtgattttataattattgattttgctattccctttcaatctaaaacaaaatcacgatttcgacaacc 22060526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 4157054 - 4157086
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  4157054 aaatccatcgattttgattgcgattttacgatt 4157086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 5884117 - 5884085
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||||||||||| ||||||||||||||||||    
T  5884117 aaatccttcgatttcgattgcgattttacgatt 5884085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 9911441 - 9911409
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  9911441 aaatccatcgattttgattgcgattttacgatt 9911409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 13551534 - 13551490
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||| ||||||||||||||| | | |||||||||    
T  13551534 aaatccttcgattttaattgcgattttacgagtcttgattttgct 13551490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 21157854 - 21157523
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    |||| |||||| ||||||||||||||||||||  |||||||| | | | |||||| | ||||||   | | ||||| |||||||| ||||||||||||||    
T  21157854 tttactcacttacaacgactcaaatccatagcaaaatcctaaaacaagaaaaatcgtagtaaaatcgcttaaaaattgcacaaaaccgtgaaattcatac 21157755  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatttatgatt 200  Q
    ||||| |||| |||||||| | |||| ||| ||||||||||       | ||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  21157754 aaaatcgcagaattttaaaggattttgaagaattttgtccagtttttgagtcatttatgtataagtattttgtagactttaaac-gagtcatttacgatt 21157656  T
Q  201 atatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt----tcttatatcgattctacaaaattagttaagtc 296  Q
    |||||| |||||||||||||||||||||||||||||||||||| | | ||||| ||||||| ||    || ||||| |||||||||||| ||||| | |     
T  21157655 atataccatttataacatatatttagcattacttttgttttggtagaatccattgattttgtttaccatcctatatagattctacaaaagtagttgaata 21157556  T
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    ||||||||| |||||||||| ||||||||||||    
T  21157555 aaatccttcaattttgattgagattttacgatt 21157523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 72 - 383
Target Start/End: Complemental strand, 26565648 - 26565324
Alignment:
Q  72 aaaatcgca-caaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattt 170  Q
    ||||||||| ||||||| |||||||||||||||||   ||||||||||| |||||  ||| |||||||| |       | ||||||||||||||||||||    
T  26565648 aaaatcgcatcaaaatcatgaaattcatacaaaatcctaggattttaaagggtttggaagtattttgtctacttttt-agtcatttatgtataagtattt 26565550  T
Q  171 tgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgatttt---------- 260  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||| ||||||||||| ||| |||||| |||||              
T  26565549 tgtggactttaaactgagtcatttatgactatatacagtttataacatata-ttaacattatttttgttttggtaaaatccatcaattttgattgcaatt 26565451  T
Q  261 ----gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaattt 356  Q
        ||||| |||||| |||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||| ||| ||||| |||| ||||| ||  |    
T  26565450 ttacgattttttatattgattctacaaaagtagttgagtaaaatccttcgattttgattacgattttacgattttcgtttttgttcttcccttttaacct 26565351  T
Q  357 gaagcaaaatcttgattttgacaacct 383  Q
    |||| || |||   |||||||||||||    
T  26565350 gaagaaagatcccaattttgacaacct 26565324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 81 - 344
Target Start/End: Original strand, 30294291 - 30294559
Alignment:
Q  81 caaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggacttt 180  Q
    |||||||||||||||||||||||||   || |||||||| |||||| || |||||||||||       | |||||||||||||| |||||||||||||||    
T  30294291 caaaatcgtgaaattcatacaaaatcatagaattttaaagggttttgaaagattttgtccatttttttagtcatttatgtataactattttgtggacttt 30294390  T
Q  181 aaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt--------------tc 266  Q
    | |||| |||||||||        ||||||||||||||||||||| |||||  |||||||||| ||| |||||||| |||||||              ||    
T  30294391 atactgggtcatttat--------acaatttataacatatatttaacattatctttgttttggtaaaatccatcgagtttgattgtgattttaggatttc 30294482  T
Q  267 ttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctt 344  Q
    || ||||||||||| |||| ||||||||| |||||||||||||||||||| || ||||||||| | ||||||||||||    
T  30294483 ttttatcgattctataaaagtagttaagtaaaatccttcgattttgattgtga-tttacgatttttgattttgctctt 30294559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 39182388 - 39182509
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||||| |||||  ||||  |  ||||||    
T  39182388 atttcttatatcgattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattgtcgatttttctcttctctttggaactgaagc 39182487  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||||||  ||||||||||||||    
T  39182488 aaaatcacgattttgacaacct 39182509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 1977780 - 1977893
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    |||||||||||||||||||| ||||| | || ||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||||| |  |||||    
T  1977780 gatttcttatatcgattctaaaaaataa-ttgagtaaaatccttcgattttgattgcgattttacgattgtcgatttttctcttctctttcgacctgaag 1977878  T
Q  361 caaaatcttgatttt 375  Q
    |||||||||||||||    
T  1977879 caaaatcttgatttt 1977893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 17809149 - 17809057
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    |||||||||||||||||||||   || || |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  17809149 tcatttatgtataagtatttttcagatttaaaactgagtcatttatgattatatgcaatttataacatatatttagcattatttttgttttgg 17809057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 261 - 383
Target Start/End: Complemental strand, 22687165 - 22687043
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    ||||||||||||||||||||||||| ||||| ||| |||| |||| |||||| ||| |||||||||||| ||||||||||||||  ||||| || |||||    
T  22687165 gatttcttatatcgattctacaaaagtagttgagtaaaattcttcaattttggttgtgattttacgattctcgattttgctcttctctttcgatctgaag 22687066  T
Q  361 caaaatcttgattttgacaacct 383  Q
    |||||||  |||||| |||||||    
T  22687065 caaaatcccgattttaacaacct 22687043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 14055489 - 14055609
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||||||||||| |||||||||| ||||| ||| |||||||||||||||| |||||||||||| |||||||||||||||| |  ||||| |  ||||||    
T  14055489 atttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttaccattgtcgattttgctcatctctttcgacctgaagc 14055588  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||||||  ||||||||||||||    
T  14055589 aaaatc-cgattttgacaacct 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 14365517 - 14365637
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||||||||||| |||||||||| ||||| ||| |||||||||||||||| |||||||||||| |||||||||||||||| |  ||||| |  ||||||    
T  14365517 atttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttaccattgtcgattttgctcatctctttcgacctgaagc 14365616  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||||||  ||||||||||||||    
T  14365617 aaaatc-cgattttgacaacct 14365637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 1981358 - 1981266
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttg 242  Q
    ||||||||||||| |||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  1981358 tcatttatgtatatgtattttgtggactttgaactttagtcatttatgactatatgcaatttataacatatatttagcattatttttgttttg 1981266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 383
Target Start/End: Complemental strand, 44944837 - 44944621
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt--------------t 265  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||| |||| | || |||||| |||||| |||||||||||||              |    
T  44944837 taaactaagtcatttatgactatataccatttataacatatatttagtattattatt-ttttggtaaagtctatcgattttgattgcgattttacaattt 44944739  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
    |||||||||||||||||||| |  |||||| ||||  ||||||||| ||||||||||||||| |  ||  |||||| ||||||||| || ||||| |||     
T  44944738 cttatatcgattctacaaaagtccttaagtaaaattgttcgattttaattgcgattttacgagtcccgcatttgctatttcctttcgatctgaagtaaag 44944639  T
Q  366 tcttgattttgacaacct 383  Q
    ||  ||||||||||||||    
T  44944638 tcccgattttgacaacct 44944621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 25842765 - 25842653
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    ||||||||| || |||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| | | ||    
T  25842765 catttatgtgtatgtattttgtggactttgaactttagtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtagaatc 25842666  T
Q  251 catcgattttgatt 264  Q
    | ||||||||||||    
T  25842665 c-tcgattttgatt 25842653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 383
Target Start/End: Original strand, 4574968 - 4575083
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatc 367  Q
    |||||||||||||||||| ||||| |||  ||| ||| |||||||||||||||||||||||| | |||||| || || ||||||||  ||||| ||||||    
T  4574968 tatatcgattctacaaaagtagttgagtagaattctttgattttgattgcgattttacgatttttgattttactattccctttcaacctgaagaaaaatc 4575067  T
Q  368 ttgattttgacaacct 383  Q
    |  |||||||||||||    
T  4575068 tcaattttgacaacct 4575083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 180 - 383
Target Start/End: Original strand, 5058666 - 5058881
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------attt 265  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||| |||| || | |||||| |||||||||||||||||              ||||    
T  5058666 taaactaagtcatttatgactatataccatttataacatatatttagtatta-ttattttttggtaaagtccatcgattttgattgcgattttacaattt 5058764  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
     |||||||||||| ||||||||  || | | ||||||||||||||||||||| ||||||||| |  |||||||||| || |||||  || ||||| |||     
T  5058765 tttatatcgattc-acaaaattccttgattaaaatccttcgattttgattgcaattttacgaattccgattttgctattcccttttgatctgaagtaaag 5058863  T
Q  366 tcttgattttgacaacct 383  Q
    ||  ||||||||||||||    
T  5058864 tcccgattttgacaacct 5058881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 23618463 - 23618351
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    |||||||||||| ||||||||| |||||| ||||  |||||||||||| ||||| |||||||||| ||||||||| ||||| ||||||||||| | | ||    
T  23618463 catttatgtatatgtattttgtagactttgaactttagtcatttatgactatatgcaatttataatatatatttaacattatttttgttttggtagaatc 23618364  T
Q  251 catcgattttgatt 264  Q
    | ||||||||||||    
T  23618363 c-tcgattttgatt 23618351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 8329942 - 8329874
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgatt 329  Q
    ||||||||||||| ||||||||||| ||||| ||| |||||||| ||||||||||||||||||||||||    
T  8329942 gatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgattttacgatt 8329874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 8343700 - 8343580
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    ||||| ||||||| ||||||||||| ||||| ||| |||| ||||||||||||||||  ||||||||||||| |||||| ||||  ||||| |  |||||    
T  8343700 gattttttatatcaattctacaaaagtagttgagtaaaatacttcgattttgattgcatttttacgattgtcaattttgttcttctctttcgacctgaag 8343601  T
Q  361 caaaatcttgattttgacaac 381  Q
    ||||||  ||||||| |||||    
T  8343600 caaaattctgattttaacaac 8343580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 8329877 - 8329799
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttg 339  Q
    ||||||||||||| ||||||||||| ||||| ||| ||||||||| ||||||||||| |||||| ||||||| ||||||    
T  8329877 gatttcttatatcaattctacaaaagtagttgagtaaaatccttcaattttgattgcaattttatgattgtcaattttg 8329799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 382
Target Start/End: Complemental strand, 20570870 - 20570662
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------atttcttatat 272  Q
    |||||||||||| ||||||| ||||||||||||||||||| |||| || | |||||| |||||||||||||||||              |||||||||||    
T  20570870 agtcatttatgactatataccatttataacatatatttagtatta-ttcttttttggtaaagtccatcgattttgattgtgattttataatttcttatat 20570772  T
Q  273 cgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgat 372  Q
    ||||||||||||| |  || ||| ||||| ||| |||||||||||||||||| || | || |||||| | || ||||||||  ||||| | | ||  |||    
T  20570771 cgattctacaaaagtccttgagtaaaatctttcaattttgattgcgattttatgagtctcaattttgttattccctttcaacctgaagtagagtcccgat 20570672  T
Q  373 tttgacaacc 382  Q
    ||||||||||    
T  20570671 tttgacaacc 20570662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 21846345 - 21846263
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctct 343  Q
    |||||||||||||||||||| |||| ||||| | | |||||||||||||||| ||||||||||| |||| | |||||||||||    
T  21846345 gatttcttatatcgattctataaaagtagttgattaaaatccttcgattttggttgcgattttaggatttttgattttgctct 21846263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 8346430 - 8346361
Alignment:
Q  260 tgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgatt 329  Q
    |||||||||||||| ||||||||||| ||||| ||| |||||||| ||||||||||||||| ||||||||    
T  8346430 tgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgatattacgatt 8346361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 341
Target Start/End: Original strand, 17741886 - 17741955
Alignment:
Q  272 tcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||| |||| ||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||    
T  17741886 tcgattctaaaaaagtagttaagtaaaatccttcaattttgattgcaattttacgattttcgattttgct 17741955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 7730256 - 7730174
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctt 344  Q
    |||||||||||| ||| ||||||| ||||| ||| ||| | |||||||||| |||||||||||||||||  ||||||||||||    
T  7730256 atttcttatatcaattatacaaaagtagttgagtaaaaccattcgattttggttgcgattttacgattgatgattttgctctt 7730174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 351
Target Start/End: Original strand, 5715517 - 5715606
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    ||||| |||||||||||||||||| |  || ||| |||||| |||||||||||||||||||||||| |  ||||||| || |||||||||    
T  5715517 atttcctatatcgattctacaaaagtccttgagtaaaatccctcgattttgattgcgattttacgagtcccgatttttctatttcctttc 5715606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 8346364 - 8346244
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    ||||||||||||| |||||| |||| ||||| ||| |||||||||||||||| ||||  | ||||||||||| |||||| ||||  ||||| |   ||||    
T  8346364 gatttcttatatcaattctataaaagtagttgagtaaaatccttcgattttgtttgcattcttacgattgtcaattttgttcttctctttcgaccggaag 8346265  T
Q  361 caaaatcttgattttgacaac 381  Q
     |||||| ||||||| |||||    
T  8346264 taaaatcctgattttaacaac 8346244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 10285759 - 10285679
Alignment:
Q  303 ttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    ||||||||||||||||||||||||||||| |||||| |||||  ||||| |  ||||| ||||||  ||||||||||||||    
T  10285759 ttcgattttgattgcgattttacgattgttgatttttctcttctctttcgacctgaagtaaaatcccgattttgacaacct 10285679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 4247586 - 4247653
Alignment:
Q  260 tgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    |||||||||||||||||||||||||| |  || ||| |||||||| || |||||||||||||||||||    
T  4247586 tgatttcttatatcgattctacaaaaatccttgagtaaaatcctttgaatttgattgcgattttacga 4247653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 383
Target Start/End: Original strand, 17811586 - 17811701
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatc 367  Q
    |||||||||||||||||| |  || ||| ||||| ||||||||||||||||||||||||| |  |||||||||| || |||||  |  ||||| ||| ||    
T  17811586 tatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgaatcccgattttgctattcccttttgacctgaagtaaagtc 17811685  T
Q  368 ttgattttgacaacct 383  Q
      ||||||||||||||    
T  17811686 ccgattttgacaacct 17811701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 8254143 - 8254028
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactg-agtcatttatgat---tatatacaatttataacatatatttagcattacttttgttttggcaaa 247  Q
    |||||||| ||| |||||||||  ||||| ||||  |||||||||||||   ||||| |||||||||||||||||||| ||||| ||||||||||| | |    
T  8254143 catttatgcatatgtattttgttcactttgaactttagtcatttatgatgactatatgcaatttataacatatatttaacattatttttgttttggtaga 8254044  T
Q  248 gtccatcgattttgatt 264  Q
     ||| ||||||||||||    
T  8254043 atcc-tcgattttgatt 8254028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 8304324 - 8304438
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatc 367  Q
    |||||| ||||||||||| |  || ||| |||||||||||||||||||| |||||||||| |  ||||||||||  |  ||||| | |||||| ||| ||    
T  8304324 tatatcaattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttacgagtcgcgattttgctactctctttcgacttgaagtaaagtc 8304423  T
Q  368 ttgattttgacaacc 382  Q
    | |||||||||||||    
T  8304424 tcgattttgacaacc 8304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 8629761 - 8629670
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactga-gtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    ||||||||||||| |||||||||||||||| || | | |  |||||||| |||   |||||||||||||||||||||||||| |||||||||||    
T  8629761 tcatttatgtatatgtattttgtggactttgaatttaagatatttatgactatg--caatttataacatatatttagcattatttttgttttgg 8629670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 4247493 - 4247576
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| |||||||||||| ||||||  |||| |||||||||||||| |||| |||| ||| || ||| ||||||||||||||||    
T  4247493 taaactaagtcatttatgactatatatcatttgtaacatatatttagtatta-ttttttttaggtaaaatccatcgattttgatt 4247576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 17811484 - 17811568
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| |||||||||| ||||||||| |||||||| |||||||||  |||| | || ||| || ||| ||||||||||||||||    
T  17811484 taaactaagtcatttataattatataccatttataaaatatatttaatattaatattttttgggtaaaatccatcgattttgatt 17811568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 383
Target Start/End: Complemental strand, 23618317 - 23618205
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttg 370  Q
    ||||||||||||||| |  || ||| |||| ||||||||||||||||||||||  || |  ||||||||||  | |||||||| || ||| ||| |||||    
T  23618317 atcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgattttcggagtcccgattttgctactccctttcaacttaaagtaaagtcttg 23618218  T
Q  371 attttgacaacct 383  Q
    ||||||| |||||    
T  23618217 attttgataacct 23618205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 24915908 - 24915791
Alignment:
Q  68 catcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagta 167  Q
    |||||| |||| |||||||||| |||| || ||||||  ||||  |||||||  ||||  ||| ||||||||||       ||||||||| |||||||||    
T  24915908 catcaagatcgtacaaaatcgtaaaatccaaacaaaaacgcagagttttaaagagtttcgaagaattttgtccatttttttaatcatttacgtataagta 24915809  T
Q  168 ttttgtggactttaaact 185  Q
    ||||||||||||||||||    
T  24915808 ttttgtggactttaaact 24915791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 5715426 - 5715469
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatt 223  Q
    |||||| |||||||||||||||||||| ||||||||||||||||    
T  5715426 taaactaagtcatttatgattatataccatttataacatatatt 5715469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 24725469 - 24725418
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcatta 231  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||| ||||    
T  24725469 taaactaagtcatttatgactatataccatttataacatatatttagtatta 24725418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 24725369 - 24725307
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttta 324  Q
    ||||| |||||||||||||||||| |  || ||| |||||||| |||||||||||||||||||    
T  24725369 atttcctatatcgattctacaaaagtccttgagtaaaatcctttgattttgattgcgatttta 24725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 14055388 - 14055433
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatattta 225  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||    
T  14055388 taaactaagtcatttatgactatataccatttataacatatattta 14055433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 14365416 - 14365461
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatattta 225  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||    
T  14365416 taaactaagtcatttatgactatataccatttataacatatattta 14365461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 17809044 - 17808995
Alignment:
Q  307 attttgattgcgattttacgattgtcgattttgctctttcctttcaattt 356  Q
    ||||||||||||||||||||||| ||||||||||| || | |||||||||    
T  17809044 attttgattgcgattttacgattttcgattttgctattccatttcaattt 17808995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 24989670 - 24989606
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||| |||||||||||||||||| |  ||| || ||||||||||||||||||||| |||||||||    
T  24989670 atttcctatatcgattctacaaaagtcctta-gtaaaatccttcgattttgattgccattttacga 24989606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 24990063 - 24990010
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattact 233  Q
    |||||| | |||||||||| ||||||| ||||||||||||||||||| ||||||    
T  24990063 taaactaaatcatttatgactatatactatttataacatatatttagtattact 24990010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 27509309 - 27509228
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgat-----tgcgattttacgattgtcgatttt 338  Q
    ||||||||||||||||||| |||| ||||| ||| ||||||||| ||||| ||     ||| ||||||||||||||||||||    
T  27509309 atttcttatatcgattctataaaagtagttgagtaaaatccttcaattttaatttggctgcaattttacgattgtcgatttt 27509228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 383
Target Start/End: Complemental strand, 48621532 - 48621431
Alignment:
Q  282 aaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaac 381  Q
    |||| ||||| ||| ||||| ||| ||||  ||||||||||||||||| ||||||||| | ||||||||  |||||||| ||||| |  || ||||||||    
T  48621532 aaaagtagttgagtaaaatctttcaatttcaattgcgattttacgattttcgattttgttatttcctttagatttgaagtaaaatttcaatgttgacaac 48621433  T
Q  382 ct 383  Q
    ||    
T  48621432 ct 48621431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 4574879 - 4574935
Alignment:
Q  206 caatttataacatatatttagcattacttttgttttggcaaagtccatcgattttga 262  Q
    |||||||||||||||||| ||||||| |||| |||||| ||| || |||||||||||    
T  4574879 caatttataacatatattaagcattatttttattttggtaaaatctatcgattttga 4574935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 11325216 - 11325292
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctt 344  Q
    |||||| ||| |||| || ||||| ||| ||| ||||  | |||| |||||||||||||||||||||||||||||||    
T  11325216 tatatcaattttacagaagtagttgagtaaaacccttgaaatttggttgcgattttacgattgtcgattttgctctt 11325292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 27221681 - 27221725
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||    
T  27221681 aaatccttcgattttgattgcgattttacgaatcccgattttgct 27221725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 341
Target Start/End: Original strand, 7307204 - 7307243
Alignment:
Q  302 cttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  7307204 cttcgattttgattgcgattttacgatttgcgattttgct 7307243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 24990139 - 24990096
Alignment:
Q  13 caacgactcaaatccatagccgaatcctaacataggcaaaatcc 56  Q
    |||||||||||||||||||  ||||||||| |||||||||||||    
T  24990139 caacgactcaaatccatagtagaatcctaaaataggcaaaatcc 24990096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 7307140 - 7307197
Alignment:
Q  185 tgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    ||||||||||| || ||||| ||||||||| |||||||||| ||||| |||||||||||    
T  7307140 tgagtcatttacgactatatgcaatttata-catatatttaacattatttttgttttgg 7307197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 8304178 - 8304252
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatattt 224  Q
    |||||||| |||| | ||||| |||||||| ||||  || ||||||||| ||||| |||||||||||||||||||    
T  8304178 tcatttatatatatgcattttttggactttgaactttagacatttatgactatatgcaatttataacatatattt 8304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 23618640 - 23618594
Alignment:
Q  70 tcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggatttt 116  Q
    ||||||||||||||||||||||||| ||| |||||| | ||||||||    
T  23618640 tcaaaatcgcacaaaatcgtgaaatccattcaaaatcgtaggatttt 23618594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 25842950 - 25842884
Alignment:
Q  72 aaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgt 138  Q
    ||||| ||||||||||||||||||||| |||||| ||| |||||| |  | |||| |||||||||||    
T  25842950 aaaattgcacaaaatcgtgaaattcattcaaaatcgcaagattttgatggattttgaaggattttgt 25842884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 26281302 - 26281256
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttag 226  Q
    |||||| |||||||||||| ||||||| ||||||||| |||||||||    
T  26281302 taaactaagtcatttatgactatataccatttataacttatatttag 26281256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 27221555 - 27221597
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatat 222  Q
    |||||| |||||||||||| ||||||| |||||||||||||||    
T  27221555 taaactaagtcatttatgactatataccatttataacatatat 27221597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 8254039 - 8254002
Alignment:
Q  304 tcgattttgattgcgattttacgattgtcgattttgct 341  Q
    |||||||||||||||||||||||| | |||||||||||    
T  8254039 tcgattttgattgcgattttacgagtctcgattttgct 8254002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 5058628 - 5058660
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    ||||||| |||||||||||||||||||||||||    
T  5058628 aaatcctacgattttgattgcgattttacgatt 5058660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 9685156 - 9685112
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||| ||||||||||||||| | | |||||||||    
T  9685156 aaatccttcgattttaattgcgattttacgagtcttgattttgct 9685112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 22687694 - 22687662
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  22687694 aaatccatcgattttgattgcgattttacgatt 22687662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 27221517 - 27221549
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  27221517 aaatccatcgattttgattgcgattttacgatt 27221549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 4e-57; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 381
Target Start/End: Original strand, 27676405 - 27676787
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||| ||| | |||||||||||||||| |||||| || ||||| |||||||| ||||||           | ||||| ||||||||||| |||||    
T  27676405 tttattcaccttctatgactcaaatccatagcagaatcccaaaataggtaaaatcctagtaaaa-----------tagcacagaatcgtgaaatccatac 27676493  T
Q  101 aaaattgcaggattttaaacggt-ttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatttatgat 199  Q
    |||| | ||||| || ||| ||  ||||||||||||||||||       | |||||||||||||||||||||||||| ||||||| |||||||||||||     
T  27676494 aaaaattcaggaattgaaaaggggttttaaggattttgtccatttttt-agtcatttatgtataagtattttgtgga-tttaaaccgagtcatttatgac 27676591  T
Q  200 tatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt--------------tcttatatcgattctacaaaa 285  Q
    |||||| ||||||||||||||||||| ||||  ||||||||||| ||| ||||| ||||||||||              ||||||||||||| |||||||    
T  27676592 tatatataatttataacatatatttaacattgtttttgttttggtaaaatccattgattttgattgtgattttacgatttcttatatcgattttacaaaa 27676691  T
Q  286 ttagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaac 381  Q
     ||||| ||| ||||| |||||||||||||||||||||| |||| |||||||||||||| |||||| | ||||||||||||| ||||||| |||||    
T  27676692 gtagttgagtaaaatctttcgattttgattgcgattttaagattttcgattttgctcttccctttcgacttgaagcaaaatcctgattttaacaac 27676787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 17064539 - 17064660
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |  ||||||    
T  17064539 atttcttatattgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgattttgatcttttctttcgacctgaagc 17064638  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||||||   |||||||||||||    
T  17064639 aaaatcccaattttgacaacct 17064660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 10873025 - 10872816
Alignment:
Q  2 ttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcataca 101  Q
    |||||||| |||||||||||||||||||||| |||||  || |||||||||||||| ||||||           |||||||||||| | |||| ||||||    
T  10873025 ttattcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcctagtaaaa-----------tcgcacaaaatcttaaaatccataca 10872937  T
Q  102 aaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaa-tcatttatgtataagtattttgtggactttaaactgagtcatttatgatt 200  Q
    ||||  || ||||||||| |||||| ||||||||||||||        | |||||||||| ||||||||||||||||||||||||  |||||||||||      
T  10872936 aaatcacaagattttaaaaggttttgaaggattttgtccattttttttagtcatttatgtttaagtattttgtggactttaaactatgtcatttatgaca 10872837  T
Q  201 atatacaatttataacatata 221  Q
    | |||||||||||||||||||    
T  10872836 aaatacaatttataacatata 10872816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 81 - 383
Target Start/End: Original strand, 17796605 - 17796918
Alignment:
Q  81 caaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtcca-nnnnnnnaatcatttatgtataagtattttgtggactt 179  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |        | |||||||| ||||||| ||||||| ||||    
T  17796605 caaaatcgtgaaatccatacaaaattgcaggattttaaagggtttttaatgattttgtctattttttttagtcatttatttataagtgttttgtgaactt 17796704  T
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatttc----tta------ 269  Q
    |||||  |||||||||| | ||||||||||||||||||  ||||| ||| || |||| ||||||  |  |||||| |||||||||||    |||          
T  17796705 taaaccaagtcatttattaatatatacaatttataacagttattttgcactatttttattttgg--acatccatcaattttgatttcgattttacgattt 17796802  T
Q  270 --tatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatc 367  Q
      |||||||||||||||| ||||| ||| |||| |||||||||| ||||| ||||||||||| |  ||||| || || |||||| |  |||| |||||||    
T  17796803 cttatcgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgattttttatttttcttttccctttcgacctgaatcaaaatc 17796902  T
Q  368 ttgattttgacaacct 383  Q
    |  ||||||| |||||    
T  17796903 tcaattttgataacct 17796918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 81 - 383
Target Start/End: Original strand, 19105045 - 19105358
Alignment:
Q  81 caaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtcca-nnnnnnnaatcatttatgtataagtattttgtggactt 179  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |        | |||||||| ||||||| ||||||| ||||    
T  19105045 caaaatcgtgaaatccatacaaaattgcaggattttaaagggtttttaatgattttgtctattttttttagtcatttatttataagtgttttgtgaactt 19105144  T
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatttc----tta------ 269  Q
    |||||  |||||||||| | ||||||||||||||||||  ||||| ||| || |||| ||||||  |  |||||| |||||||||||    |||          
T  19105145 taaaccaagtcatttattaatatatacaatttataacagttattttgcactatttttattttgg--acatccatcaattttgatttcgattttacgattt 19105242  T
Q  270 --tatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatc 367  Q
      |||||||||||||||| ||||| ||| |||| |||||||||| ||||| ||||||||||| |  ||||| || || |||||| |  |||| |||||||    
T  19105243 cttatcgattctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgattttttatttttcttttccctttcgacctgaatcaaaatc 19105342  T
Q  368 ttgattttgacaacct 383  Q
    |  ||||||| |||||    
T  19105343 tcaattttgataacct 19105358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 25870219 - 25870098
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| ||||||||||||||||||||||||| |||||  ||||| |  | ||||    
T  25870219 atttcttatatcgattctacaaacttagttgagtaaaatcctttgattttggttgcgattttacgattgtcgattttactcttctctttcgacctaaagc 25870120  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||||||| ||||||||||||||    
T  25870119 aaaatctcgattttgacaacct 25870098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 383
Target Start/End: Complemental strand, 3449206 - 3449086
Alignment:
Q  263 tttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagca 362  Q
    ||||||||||||||||||||||| ||||| | | ||||| |||||||||| |||||||||||||||||||||||||||||||  |||||||  | |||||    
T  3449206 tttcttatatcgattctacaaaagtagttgaataaaatcattcgattttggttgcgattttacgattgtcgattttgctcttctctttcaacctaaagca 3449107  T
Q  363 aaatcttgattttgacaacct 383  Q
    |||||   |||||||||||||    
T  3449106 aaatcccaattttgacaacct 3449086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 383
Target Start/End: Original strand, 42696984 - 42697200
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgat--------------tt 265  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||| | |||  |||| |||||| ||| |||||||||||||||              ||    
T  42696984 taaactaagtcatttatgactatataccatttataacatatatttggtatttttttttttttggtaaaatccatcgattttgattgcgagtttatgattt 42697083  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
    |||||||||||||||||||| ||||| | | ||||||||| |||||  |||||||||||| |||||||||||| |||||  | ||| |  ||||||||||    
T  42697084 cttatatcgattctacaaaagtagttgaataaaatccttcaattttagttgcgattttacaattgtcgatttt-ctcttctcattcgacctgaagcaaaa 42697182  T
Q  366 tcttgattttgacaacct 383  Q
    || |||||||||||||||    
T  42697183 tcctgattttgacaacct 42697200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 380
Target Start/End: Complemental strand, 6136467 - 6136348
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    |||||||||||||||||||| |||| ||||| ||| ||||| || |||||||||||||||||||||||| | ||||||||| || |||| | || |||||    
T  6136467 gatttcttatatcgattctataaaagtagttgagtaaaatcttttgattttgattgcgattttacgatttttgattttgcttttcccttccgatatgaag 6136368  T
Q  361 caaaatcttgattttgacaa 380  Q
    ||||||  ||||||||||||    
T  6136367 caaaattgtgattttgacaa 6136348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 261 - 383
Target Start/End: Complemental strand, 10872613 - 10872491
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    ||||||||||||||||||| ||||| ||||| ||| ||||||||| |||||||||||||||||| |||| | |||||| ||||| |||||  |  |||||    
T  10872613 gatttcttatatcgattcttcaaaagtagtttagtaaaatccttcaattttgattgcgattttatgatttttgatttttctcttcccttttgacctgaag 10872514  T
Q  361 caaaatcttgattttgacaacct 383  Q
     |||||| |||||||||||||||    
T  10872513 taaaatcctgattttgacaacct 10872491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 261 - 383
Target Start/End: Original strand, 13286175 - 13286297
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    ||||||||||||||||||||||||| ||||| ||| ||||| || |||||||||||||||||||||| | | |||||| ||||| |||| | |  |||||    
T  13286175 gatttcttatatcgattctacaaaagtagttgagtaaaatcttttgattttgattgcgattttacgagttttgatttttctcttcccttccgacctgaag 13286274  T
Q  361 caaaatcttgattttgacaacct 383  Q
    ||||||  |||||||||||||||    
T  13286275 caaaattgtgattttgacaacct 13286297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 254 - 383
Target Start/End: Complemental strand, 8592304 - 8592175
Alignment:
Q  254 cgattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaa 353  Q
    |||||||| | || |||||||||||||||||| |  || ||| ||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| |    
T  8592304 cgattttgctatcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctatttcctttcga 8592205  T
Q  354 tttgaagcaaaatcttgattttgacaacct 383  Q
     |||||| ||| ||  ||||| ||||||||    
T  8592204 cttgaagtaaagtcccgatttcgacaacct 8592175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 28135994 - 28136115
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||||||||||| ||| ||||||| ||||| ||| |||||||||||||||||| |||||||||||||| |||||||| ||||  | ||| || ||||||     
T  28135994 atttcttatatcaattttacaaaagtagttgagtaaaatccttcgattttgatagcgattttacgattctcgattttactctaccattttaacttgaagt 28136093  T
Q  362 aaaatcttgattttgacaacct 383  Q
    |||||| | |||||||||||||    
T  28136094 aaaatcctaattttgacaacct 28136115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 383
Target Start/End: Original strand, 41671426 - 41671532
Alignment:
Q  277 tctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttg 376  Q
    ||||||||| ||||| ||| |||||||||||||||| |||||||||||| ||| ||||||||||||||  ||||| |  ||||||||||||  |||||||    
T  41671426 tctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacaattatcgattttgctcttctctttcgacctgaagcaaaatcccgattttg 41671525  T
Q  377 acaacct 383  Q
    |||||||    
T  41671526 acaacct 41671532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 6861163 - 6861048
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaag 248  Q
    |||| ||||||||| | ||||||| ||||||||||  || |||||||||| |||| ||||||||||||||||| ||||| ||| ||||||||||| | |     
T  6861163 tcatatatgtataaatgttttgtgcactttaaacttcgaatcatttatgactatagacaatttataacatatagttagctttatttttgttttggtagaa 6861064  T
Q  249 tccatcgattttgatt 264  Q
    ||||||||||||||||    
T  6861063 tccatcgattttgatt 6861048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 383
Target Start/End: Complemental strand, 9152873 - 9152762
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttg 370  Q
    ||||||||||||||| ||||| ||||||||| |||||||||| || ||||||||||||||| |||||| |||||  ||||| |  | |||||||||| ||    
T  9152873 atcgattctacaaaaatagttgagtcaaatctttcgattttggttacgattttacgattgttgattttactcttctctttcgacct-aagcaaaatcctg 9152775  T
Q  371 attttgacaacct 383  Q
    |||||||||||||    
T  9152774 attttgacaacct 9152762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 381
Target Start/End: Original strand, 22137508 - 22137628
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    ||||||||||||||||||||||||| ||||| ||| |||| ||| ||||||| ||| |||||||| ||||  ||||||||||||  ||||| |  ||||     
T  22137508 gatttcttatatcgattctacaaaagtagttgagtaaaattctttgattttggttgtgattttactattgctgattttgctcttctctttcgacctgaaa 22137607  T
Q  361 caaaatcttgattttgacaac 381  Q
    |||||||| ||||||||||||    
T  22137608 caaaatctcgattttgacaac 22137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 19348648 - 19348760
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    |||||||||||| ||||| |||||||||| || |  |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| | | ||    
T  19348648 catttatgtatatgtattatgtggactttgaattatagtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtataatc 19348747  T
Q  251 catcgattttgatt 264  Q
    | ||||||||||||    
T  19348748 c-tcgattttgatt 19348760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 18014089 - 18014177
Alignment:
Q  153 atttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttg 242  Q
    ||||||||||| |||||||||||||||| ||||  |||||||||||| |||   |||||||||||||||||||||||||| ||||||||||    
T  18014089 atttatgtatatgtattttgtggactttgaactttagtcatttatgactatg--caatttataacatatatttagcattatttttgttttg 18014177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 15806586 - 15806409
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||| ||||| |||||||||||||||| |||||| || | |||||||||||| ||||||           ||||||||||||||||||| |||||    
T  15806586 tttattcaccttcaatgactcaaatccatagcagaatcccaaaacaggcaaaatcctagtaaaa-----------tcgcacaaaatcgtgaaatccatac 15806498  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatttatga 198  Q
    ||||| |||||||||| |||  ||||     ||||| ||||        ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  15806497 aaaatcgcaggattttgaacaattttgtcc-attttttcca--------atcatttatgtataagtatttcgtggactttaaaccgagtcatttatga 15806409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 22970903 - 22971016
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactg-agtcattt-atgattatatacaatttataacatatatttagcattacttttgttttggcaaagt 249  Q
    |||||||||||| |||||||||||||||| ||||  |||||||| |||| ||||| ||||||||||||||||| || ||||| ||||||||||| | | |    
T  22970903 catttatgtatatgtattttgtggactttgaactttagtcattttatgactatatgcaatttataacatatatataacattatttttgttttggtagaat 22971002  T
Q  250 ccatcgattttgatt 264  Q
    || ||||||||||||    
T  22971003 cc-tcgattttgatt 22971016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 351
Target Start/End: Original strand, 28745913 - 28746097
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt--------------t 265  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||  |||| |||| ||| || ||| ||||||||||||||||              |    
T  28745913 taaactaagtcatttatgactatatactatttataacatatatttactattaatttt-tttgggtaaaatccatcgattttgattgcgattttacaattt 28746011  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    | |||||||||||||||||| |  || ||| |||| |||||||||||||||||||||||||| |  |||||||||| ||| |||||    
T  28746012 cctatatcgattctacaaaagttcttgagtaaaattcttcgattttgattgcgattttacgagtcccgattttgctattttctttc 28746097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 383
Target Start/End: Complemental strand, 8156025 - 8155905
Alignment:
Q  263 tttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagca 362  Q
    ||||||||||| || |||||||| ||||| ||| |||||||||||| ||  ||||||||||| ||||||| |||||||||||  ||| | |  |||||||    
T  8156025 tttcttatatcaatgctacaaaagtagttgagtaaaatccttcgatcttagttgcgattttatgattgtccattttgctcttctcttaccacctgaagca 8155926  T
Q  363 aaatcttgattttgacaacct 383  Q
    ||||  | |||||||||||||    
T  8155925 aaattctaattttgacaacct 8155905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 377
Target Start/End: Original strand, 21963662 - 21963778
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    |||||||||||||||||||| |||| || || ||| |||| |||  |||||| ||| |||||||| ||||||||||||||||||  ||||| |  ||||     
T  21963662 gatttcttatatcgattctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtcgattttgctcttctctttcgacctgaaa 21963761  T
Q  361 caaaatcttgattttga 377  Q
    |||||||| ||||||||    
T  21963762 caaaatctcgattttga 21963778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 377
Target Start/End: Original strand, 21986098 - 21986214
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    |||||||||||||||||||| |||| || || ||| |||| |||  |||||| ||| |||||||| ||||||||||||||||||  ||||| |  ||||     
T  21986098 gatttcttatatcgattctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtcgattttgctcttctctttcgacctgaaa 21986197  T
Q  361 caaaatcttgattttga 377  Q
    |||||||| ||||||||    
T  21986198 caaaatctcgattttga 21986214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 39428039 - 39428123
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| |||||||||||| ||||||| | ||||||||||||||||| |||| |||| ||| || ||| ||||||||||||||||    
T  39428039 taaactaagtcatttatgactatatactacttataacatatatttagtattaattttttttgggtaaaatccatcgattttgatt 39428123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 9169782 - 9169880
Alignment:
Q  165 gtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||| ||||| ||||   |||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| | | ||| ||||||||||||    
T  9169782 gtattttgtgaactttgaactttatcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtagaatcc-tcgattttgatt 9169880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 8592421 - 8592341
Alignment:
Q  165 gtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    |||||||||||||||  ||||   |||||||||||| ||||| |||||||||||||||||||| ||||| |||||||||||    
T  8592421 gtattttgtggacttcgaactttaagtcatttatgactatatgcaatttataacatatatttatcattatttttgttttgg 8592341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 27055255 - 27055306
Alignment:
Q  189 tcatttatgattatatacaatttataacatatatttagcattacttttgttt 240  Q
    |||||||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  27055255 tcatttatgattatatgcaatttacaacatatatttagcattatttttgttt 27055306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 24620088 - 24620031
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttac 325  Q
    |||||||||||||||||| |  || ||| |||||||||||||||||||||||||||||    
T  24620088 tatatcgattctacaaaagtctttgagtaaaatccttcgattttgattgcgattttac 24620031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 383
Target Start/End: Original strand, 27090666 - 27090795
Alignment:
Q  254 cgattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaa 353  Q
    |||||||| | || |||||||||| |||||||||  || ||| ||||||||||||||| |||||||| ||||||||  | ||||| || || |||||| |    
T  27090666 cgattttgctatcctatatcgattatacaaaattccttgagtaaaatccttcgatttttattgcgatcttacgatttgcaatttttctattccctttcga 27090765  T
Q  354 tttgaagcaaaatcttgattttgacaacct 383  Q
      | ||| ||||||| ||||| ||||||||    
T  27090766 cctaaagtaaaatctcgatttcgacaacct 27090795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 8566248 - 8566180
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaac-tgagtcatttatgattatatacaatttataacat 218  Q
    ||||||||||||| |||||||||||||||  ||| | |||||||||||| ||||| |||||||||||||    
T  8566248 tcatttatgtatatgtattttgtggacttcgaactttagtcatttatgactatatgcaatttataacat 8566180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 10591788 - 10591832
Alignment:
Q  199 ttatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  10591788 ttatatgcaatttataacatatatttagcattatttttgttttgg 10591832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 15515248 - 15515192
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattactttt 236  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||| |||| ||||    
T  15515248 taaactaagtcatttatgactatataccatttataacatatatttagtattattttt 15515192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 15806352 - 15806292
Alignment:
Q  204 tacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||||||||||||||||||| ||||||||||| | | |||||| ||| |||||    
T  15806352 tacaatttataacatatatttagcattatttttgttttggtagaatccatcaattctgatt 15806292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 24649686 - 24649597
Alignment:
Q  94 ttcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaa 183  Q
    ||||||||| || ||||||||||||| |||||| ||| ||||| ||||       | |||||||||||||||||||||||| ||||||||    
T  24649686 ttcatacaatatcgcaggattttaaagggttttgaagaattttatccatttttttagtcatttatgtataagtattttgtgaactttaaa 24649597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 3041197 - 3041244
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggatttt 116  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  3041197 atcaaaatcgcacaaaatcgtgaaatccattcaaaatcgcaggatttt 3041244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 23649368 - 23649447
Alignment:
Q  185 tgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    ||||||||||||| || ||| |||||||||||||||||||| ||||| ||||| |||||  ||   ||||||||||||||    
T  23649368 tgagtcatttatgtttttatgcaatttataacatatatttaacattatttttgctttggtgaaactcatcgattttgatt 23649447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 3041464 - 3041534
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    |||| |||||||||| |  || ||| ||||||||||||||||||||||||||||||| |  ||||||||||    
T  3041464 atcgtttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgct 3041534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 22971054 - 22971120
Alignment:
Q  275 attctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||| |  || ||| ||||||||||||||||||||||||||||||| |  ||||||||||    
T  22971054 attctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgct 22971120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 24620192 - 24620146
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttag 226  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||||    
T  24620192 taaactaagtcatttatgattatataccatttataaaatatatttag 24620146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 26234889 - 26234983
Alignment:
Q  22 aaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggatttt 116  Q
    ||||||||||| |||||  || |||| ||||||| |  ||||| |  |||||||||||||||||| || |||||||| |||||| ||||||||||    
T  26234889 aaatccatagcagaatctaaaaatagacaaaatcttaataaaattgtatcaaaatcgcacaaaattgtaaaattcatgcaaaatcgcaggatttt 26234983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 6136540 - 6136478
Alignment:
Q  200 tatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||||  ||||||| |||| |||| ||||||||||| ||| ||||||||||||||||    
T  6136540 tatatacaattta--acatatagttagtattatttttgttttggtaaaatccatcgattttgatt 6136478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 8560348 - 8560275
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||| ||||||||||||    || ||| |||||||||||||||||||||||||| |||| | |||||||||||    
T  8560348 tatattgattctacaaaaaaccttgagtaaaatccttcgattttgattgcgatttcacgagtctcgattttgct 8560275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 383
Target Start/End: Complemental strand, 15515143 - 15515034
Alignment:
Q  274 gattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgatt 373  Q
    ||||||| |||| ||||| ||| |||| ||||||||||  ||  |||||||| ||||||||||||| || |  |||||||  ||||||||||||  ||||    
T  15515143 gattctataaaagtagttgagtaaaatacttcgattttagttaagattttacaattgtcgattttggtcatctctttcaacctgaagcaaaatcccgatt 15515044  T
Q  374 ttgacaacct 383  Q
    || |||||||    
T  15515043 ttaacaacct 15515034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 15806309 - 15806224
Alignment:
Q  298 aatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    ||||| || ||| ||||| ||||| || |||| ||||||||||| || |||||| |  ||||||||||||| ||||||||||||||    
T  15806309 aatccatcaattctgattacgattgtatgattttcgattttgcttttccctttcgagctgaagcaaaatctcgattttgacaacct 15806224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 20756254 - 20756319
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||| |||||||||||||||||| |  || ||| ||||| ||| |||||||||||||||||||||    
T  20756254 atttcctatatcgattctacaaaaatccttgagtaaaatctttcaattttgattgcgattttacga 20756319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 25870295 - 25870231
Alignment:
Q  199 ttatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||| ||||||||||||||||||| |||| || | |||||| ||| ||||||||||||||||    
T  25870295 ttatataccatttataacatatatttagtatta-ttgttttttggtaaaatccatcgattttgatt 25870231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 19348820 - 19348864
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||| ||||||||||||||||||||| | |||||||||||    
T  19348820 aaatccttccattttgattgcgattttacgagtctcgattttgct 19348864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 20766757 - 20766677
Alignment:
Q  303 ttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    ||||||||||||||||||||||||| | |||||||||||  |  ||||| | |||||| ||| ||  ||||||||||||||    
T  20766757 ttcgattttgattgcgattttacgagtctcgattttgctactctctttcgagttgaagtaaagtcccgattttgacaacct 20766677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 20767490 - 20767443
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggatttt 116  Q
    |||||||| |||||||| |||||||||| | |||||||||||||||||    
T  20767490 atcaaaattgcacaaaaccgtgaaattcgttcaaaattgcaggatttt 20767443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 22970725 - 22970772
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggatttt 116  Q
    ||||||||||||||||||| |||||| ||| |||||| ||||||||||    
T  22970725 atcaaaatcgcacaaaatcatgaaatccattcaaaatcgcaggatttt 22970772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 13006092 - 13006146
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||| || ||||||    
T  13006092 aaatcattcaattttgattgcgattttacgattttcaattttgctattccctttc 13006146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 327
Target Start/End: Original strand, 18014258 - 18014288
Alignment:
Q  297 aaatccttcgattttgattgcgattttacga 327  Q
    |||||||||||||||||||||||||||||||    
T  18014258 aaatccttcgattttgattgcgattttacga 18014288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 21553888 - 21553814
Alignment:
Q  193 ttatgattatatacaatttataacatatatttag----cattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||| |||||||||||||||||||||    ||||| ||||||||||| | | ||| ||||||||||||    
T  21553888 ttatgattatatgcaatttataacatatatttagtcaacattatttttgttttggtagaatcc-tcgattttgatt 21553814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 22494780 - 22494734
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttag 226  Q
    |||||| ||||| |||||| ||||||| |||||||||||||||||||    
T  22494780 taaactaagtcagttatgactatataccatttataacatatatttag 22494734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 24263421 - 24263376
Alignment:
Q  72 aaaatcgcacaaaa-tcgtgaaattcatacaaaattgcaggatttt 116  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||    
T  24263421 aaaatcgcacaaaaatcgtgaaatccatacaaaattgtaggatttt 24263376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28135771 - 28135848
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcg 78  Q
    ||||||||||||||  ||||||||||||||||  ||| || | ||||||||||| || ||||||   |||||||||||    
T  28135771 tttattcactttcagtgactcaaatccatagcaaaattctcaaataggcaaaattctagtaaaatcacatcaaaatcg 28135848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 353
Target Start/End: Complemental strand, 30727714 - 30727665
Alignment:
Q  304 tcgattttgattgcgattttacgattgtcgattttgctctttcctttcaa 353  Q
    ||||||||||||||||||||| || | ||||||||||| || ||||||||    
T  30727714 tcgattttgattgcgattttaggagtctcgattttgctattccctttcaa 30727665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 8156160 - 8156128
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  8156160 aaatccatcgattttgattgcgattttacgatt 8156128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 4e-54; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 151 - 351
Target Start/End: Original strand, 24648124 - 24648330
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| || |||||| | ||| ||    
T  24648124 tcatttatgtataagtattttgtggactttaaattgagtcatttatgactatatacaatttataatatatatttagcattatttatgttttagtaaaatc 24648223  T
Q  251 catcgatttt------gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctt 344  Q
    || |||||||      ||||| |||||| |||||||||||| ||||| ||| |||||||| |||||||||| ||||||||||||| |||||||| |||||    
T  24648224 caccgattttgattgcgattttttatattgattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacgattttcgattttactctt 24648323  T
Q  345 tcctttc 351  Q
     ||||||    
T  24648324 ccctttc 24648330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 81 - 383
Target Start/End: Complemental strand, 43005953 - 43005635
Alignment:
Q  81 caaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaa-tcatttatgtataagtatttt-gtggact 178  Q
    ||||||| ||||||||||||||||| |||||||||| || |||||| ||||||||||| ||        | |||||||| | |||||||||| ||| | |    
T  43005953 caaaatcatgaaattcatacaaaatcgcaggatttttaagggttttgaaggattttgttcattttttttagtcatttatatttaagtatttttgtgaaat 43005854  T
Q  179 ttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgatttt--------------gatt 264  Q
    |||| |||||| |||||||| | |||||||||||||||||||||||||||||| ||||||||||| | | ||||||||||||              ||||    
T  43005853 ttaatctgagtgatttatgagtgtatacaatttataacatatatttagcattatttttgttttggtacaatccatcgattttaattgcgattttacgatt 43005754  T
Q  265 tcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaa 364  Q
    || ||||||||||||||||||  |||| ||| ||||| ||| ||||||||||||||||||| ||| |||| ||| || ||||||||| || | |||||||    
T  43005753 tcctatatcgattctacaaaagaagttgagtaaaatctttcaattttgattgcgattttacaattttcgaattttctatttcctttcgatctaaagcaaa 43005654  T
Q  365 atcttgattttgacaacct 383  Q
    |||  ||||||||||||||    
T  43005653 atcccgattttgacaacct 43005635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 323
Target Start/End: Original strand, 26021444 - 26021612
Alignment:
Q  167 attttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatc----------ga 256  Q
    |||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||| | ||||          ||    
T  26021444 attttgtccactttaatctgagtcatttatgactatatacaatttataacatatatttagcattattattgttttggtaaaatgcatcgtttaattgtga 26021543  T
Q  257 tttt--gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttt 323  Q
    ||||  ||||||||||||||||  |||| || ||||| ||| ||||||| |||||||||||| ||||||    
T  26021544 ttttacgatttcttatatcgatgttacacaagtagttgagtaaaatcctacgattttgattgtgatttt 26021612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 19377706 - 19377798
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatatatttagcattacttttgtttt 241  Q
    ||||||||||||| |||||||||||||||| ||||   |||||||||||| ||||| |||||||||||||||||||| ||||| |||||||||    
T  19377706 tcatttatgtatatgtattttgtggactttgaactttaagtcatttatgactatatccaatttataacatatatttaacattatttttgtttt 19377798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 27340084 - 27339963
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||||||||||| ||||||||||| |   | ||| |||||||||||||||||||||||||| |||||| ||||||||||| || |||||||| ||||||     
T  27340084 atttcttatatcaattctacaaaagtccgtgagtaaaatccttcgattttgattgcgatttcacgattttcgattttgctattccctttcaacttgaagt 27339985  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||| |   ||||||||||||||    
T  27339984 aaagttccgattttgacaacct 27339963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 41427512 - 41427626
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaag 248  Q
    ||||||||||||| |||||||||||||||| ||||   |||||||||||| ||||| |||||||||| ||||||||| ||||| ||||||||||| | |     
T  41427512 tcatttatgtatatgtattttgtggactttgaactttaagtcatttatgactatatgcaatttataatatatatttatcattatttttgttttggtagaa 41427611  T
Q  249 tccatcgattttgatt 264  Q
    ||| ||||||||||||    
T  41427612 tcc-tcgattttgatt 41427626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 30804032 - 30804122
Alignment:
Q  153 atttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    ||||||||||||||||||||| || || |||||||||||||||||| |||||  |||| |||| | ||||||||||||| |||||||||||    
T  30804032 atttatgtataagtattttgtagaattgaaactgagtcatttatgactatatgtaattcataataaatatttagcattatttttgttttgg 30804122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 15446304 - 15446419
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaag 248  Q
    ||||||||||| ||||| |||||||||||||||||  ||||||||||||| | | | ||||| |||||||||||||| | ||| ||||||||||  | |     
T  15446304 tcatttatgtacaagtaatttgtggactttaaactttgagtcatttatgagtgtgtgcaattgataacatatatttatcgttatttttgttttgatagaa 15446403  T
Q  249 tccatcgattttgatt 264  Q
    ||||||||||||||||    
T  15446404 tccatcgattttgatt 15446419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 18843852 - 18843935
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| |||| |||| ||| || ||| ||||||||||||||||    
T  18843852 taaactaagtcatttatgattatataccatttataacatatatttagtattaatttt-tttgggtaaaatccatcgattttgatt 18843935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 22984837 - 22984755
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcatta 231  Q
    ||||||||||||| |||||||||||| ||| ||||  ||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  22984837 tcatttatgtatatgtattttgtggaatttgaactttgagtcatctatgactatatgcaatttataacatatatttagcatta 22984755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 383
Target Start/End: Complemental strand, 13341601 - 13341473
Alignment:
Q  255 gattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgt-cgattttgctctttcctttcaa 353  Q
    ||||||| | || |||||||||||||||||| ||||  ||| ||||||||| |||| | |||||||||||||||| | | ||||| || || |||||| |    
T  13341601 gattttgctatcctatatcgattctacaaaagtagtcgagt-aaatccttcaatttcgtttgcgattttacgatttttcaatttttctattccctttcga 13341503  T
Q  354 tttgaagcaaaatcttgattttgacaacct 383  Q
    ||||||||||||||  ||||||||||||||    
T  13341502 tttgaagcaaaatcccgattttgacaacct 13341473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 21059054 - 21058978
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaa-tccttcgattttgattgcgattttacgattgtcgattt 337  Q
    |||||||||||  ||||||||||| ||||||||| ||| || |||||||||| ||||||||||||||||||||||||    
T  21059054 atttcttatataaattctacaaaagtagttaagtaaaaatctttcgattttggttgcgattttacgattgtcgattt 21058978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 13349556 - 13349509
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatga 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13349556 tcatttatgtataagtattttgtggacttcaaactgagtcatttatga 13349509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 30799499 - 30799578
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcatt 230  Q
    ||||||||||||||||||||| || |||| ||||| ||||||||||||  ||| | ||||||||||| ||||||||||||    
T  30799499 tcatttatgtataagtattttatgaacttgaaactaagtcatttatgaccatacataatttataacaaatatttagcatt 30799578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 383
Target Start/End: Original strand, 41427657 - 41427772
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatc 367  Q
    |||||||||||||||||| |  |  ||| ||||||||||||||||||||||||||||||| |  ||||||||||  | |||||| | | |||| ||| ||    
T  41427657 tatatcgattctacaaaagtcctcgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgactcgaagtaaagtc 41427756  T
Q  368 ttgattttgacaacct 383  Q
    | ||||||||||||||    
T  41427757 tcgattttgacaacct 41427772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 9996950 - 9996892
Alignment:
Q  206 caatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||||    
T  9996950 caatttataacatatattaagcattatttttgttttggtaaaatccatcgattttgatt 9996892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 351
Target Start/End: Original strand, 19377838 - 19377924
Alignment:
Q  265 tcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    ||||||||||||||||||||| |  || ||| ||||||||||||||||||||  | ||||||||| ||||||||||| || ||||||    
T  19377838 tcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtaaatttacgattctcgattttgctattccctttc 19377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 187907 - 187814
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    |||||||||||||  ||||||||||||||  ||||  ||| |||||| | ||||| |||||||||||||||||||| ||||| |||||||||||    
T  187907 tcatttatgtatatatattttgtggacttcgaactttagttatttattactatatgcaatttataacatatatttaacattatttttgttttgg 187814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 383
Target Start/End: Original strand, 16417218 - 16417328
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttg 370  Q
    |||||| ||||||| ||| || ||| ||||| |||||||| ||||||||||||| |||| | ||||||| | | ||||||||||||||||||||||  ||    
T  16417218 atcgatcctacaaagttatttgagtaaaatc-ttcgatttcgattgcgattttatgatttt-gattttgttatctcctttcaatttgaagcaaaattctg 16417315  T
Q  371 attttgacaacct 383  Q
     ||||||||||||    
T  16417316 gttttgacaacct 16417328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 19579079 - 19579163
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| |||||||||||| ||| ||| ||| ||||||||||||| | |||| |||| |||||| ||| ||||||||||||||||    
T  19579079 taaactaagtcatttatgactatttaccattcataacatatatttggtattattttttttttggtaaaatccatcgattttgatt 19579163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 351
Target Start/End: Complemental strand, 41688557 - 41688474
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    |||||||||||||||||| |  |||||| |||||||||||||||| ||||||||||| || |  |||||||||| || ||||||    
T  41688557 tatatcgattctacaaaagtccttaagtaaaatccttcgattttggttgcgattttaggagtcccgattttgctattccctttc 41688474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 26021395 - 26021453
Alignment:
Q  83 aaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtcca 141  Q
    ||||||||| || |||||||||| ||||||||||||| |||||| ||||||||||||||    
T  26021395 aaatcgtgacatccatacaaaatcgcaggattttaaagggttttgaaggattttgtcca 26021453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 43235100 - 43235162
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttta 324  Q
    |||| ||||||||||||||||||| |  || ||| ||||||||||||||||||||||||||||    
T  43235100 attttttatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatttta 43235162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 19042325 - 19042236
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    ||||| |||||||||||||||||| |  |||||| |||| |||||||||| |||| |||||||||| |  | |||||||| |||||||||    
T  19042325 atttcctatatcgattctacaaaagtccttaagtaaaattcttcgattttaattgtgattttacgagtccctattttgctatttcctttc 19042236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 38158161 - 38158101
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattt 322  Q
    |||||||| || |||||||||||| ||||| ||| |||||||||||||||| |||||||||    
T  38158161 atttcttacatagattctacaaaaatagttgagtaaaatccttcgattttggttgcgattt 38158101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 15051981 - 15051915
Alignment:
Q  275 attctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||| |  || ||| ||||||||||||||||||||||||||||||| |  ||||||||||    
T  15051981 attctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgct 15051915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 22984705 - 22984643
Alignment:
Q  255 gattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgc 317  Q
    ||||||| | || ||||||||||||||||||||  || ||| |||||||||||||||||||||    
T  22984705 gattttgctatcctatatcgattctacaaaattccttgagtaaaatccttcgattttgattgc 22984643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 4289918 - 4289987
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgt 138  Q
    |||||||||||||||||||||||||| | | |||||| |||||||||| |  | |||| |||||||||||    
T  4289918 atcaaaatcgcacaaaatcgtgaaatccgttcaaaatcgcaggattttgatggattttgaaggattttgt 4289987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 15052081 - 15052013
Alignment:
Q  195 atgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||| ||||| |||||||||||||||||||| ||||| ||||||||||| | | ||| ||||||||||||    
T  15052081 atgactatatgcaatttataacatatatttaacattatttttgttttggtagaatcc-tcgattttgatt 15052013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 19979736 - 19979781
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatattta 225  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||    
T  19979736 taaactaagtcatttatgactatataccatttataacatatattta 19979781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 19579181 - 19579237
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttta 324  Q
    |||| ||||||||||||| |  || ||| ||||||||||||||||||||||||||||    
T  19579181 tataacgattctacaaaagtccttgagtgaaatccttcgattttgattgcgatttta 19579237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 20321079 - 20321163
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| ||||||||||||  |||||  ||||||||||||||||||  |||| |||| | | || ||| ||||||||||||||||    
T  20321079 taaactaagtcatttatgaccatatatcatttataacatatatttaatattaattttttctgggtaaaatccatcgattttgatt 20321163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 23172420 - 23172337
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| |||||||||||| ||||||| |||| |||||||||||||  |||| |||| ||| || ||| | ||||||||||||||    
T  23172420 taaactaagtcatttatgactatataccatttgtaacatatatttaatattaatttt-tttgggtaaaattcatcgattttgatt 23172337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 15445860 - 15445907
Alignment:
Q  68 catcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattt 115  Q
    |||||||||||||||||||| ||||||||||  |||||| ||||||||    
T  15445860 catcaaaatcgcacaaaatcatgaaattcatgtaaaatttcaggattt 15445907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 15446402 - 15446445
Alignment:
Q  298 aatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||| |||||||||||||||||||||||| | |||||||||||    
T  15446402 aatccatcgattttgattgcgattttacgagtttcgattttgct 15446445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 15446435 - 15446506
Alignment:
Q  253 tcgattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttta 324  Q
    ||||||||| | ||||||||||||||||||||| ||||  | | |||||||||| ||| ||||| |||||||    
T  15446435 tcgattttgctatcttatatcgattctacaaaagtagtcgactaaaatccttcggtttcgattgtgatttta 15446506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 351
Target Start/End: Original strand, 18843953 - 18844036
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    ||||| |||||||||||| |  || ||| |||| || ||||||||||||||||||||||| |  |||||||||| || ||||||    
T  18843953 tatatggattctacaaaagtccttgagtaaaatactccgattttgattgcgattttacgagtcccgattttgctattccctttc 18844036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 29270237 - 29270303
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacat 218  Q
    ||||||||||||||||||||||| |||||||   ||||| |||||||| ||||| ||||||| |||||    
T  29270237 tcatttatgtataagtattttgt-gactttactttgagtaatttatgactatatgcaatttaaaacat 29270303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 9996872 - 9996790
Alignment:
Q  256 attttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgatttt 338  Q
    |||||| | ||||||||  | ||||||||| |||| |||| ||||| || |||||| ||||||||||||| ||| ||||||||    
T  9996872 attttgctatcttatattaactctacaaaagtagtcaagtaaaatcttttgattttaattgcgattttacaattttcgatttt 9996790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 20321175 - 20321237
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttta 324  Q
    ||||| ||||| |||||||||||| |  || ||| ||||||||| ||||||||||||||||||    
T  20321175 atttcctatatagattctacaaaagtccttcagtaaaatccttcaattttgattgcgatttta 20321237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 21059141 - 21059066
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||| |||| || ||||||||||||||||||| |||  |||| || | | ||| ||||||||||||||||    
T  21059141 agtcatttatgactataaaccatttataacatatatttagtatt--tttttttgttgtaaaatccatcgattttgatt 21059066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 29269774 - 29269824
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaa 119  Q
    ||||||||| || ||||| ||||||||||| |||||||| |||||||||||    
T  29269774 atcaaaatcacaaaaaattgtgaaattcatgcaaaattgtaggattttaaa 29269824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 17624851 - 17624900
Alignment:
Q  280 acaaaattagttaagtcaaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||| ||| ||||| || ||||||||||||||||||||||||    
T  17624851 acaaaagtagttgagtaaaatcttttgattttgattgcgattttacgatt 17624900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 22645589 - 22645536
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgctctttccttt 350  Q
    ||||||||||||||||||||| ||||||||| | || |||||||| || |||||    
T  22645589 aaatccttcgattttgattgcaattttacgagtctcaattttgctattcccttt 22645536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 41688657 - 41688575
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| | |||||||| | ||||||| ||| ||||||||||||||| ||||  ||| |||||| ||| | ||||||||||||||    
T  41688657 taaactaaatcatttataactatataccattcataacatatatttagtatta--ttttttttggtaaaattcatcgattttgatt 41688575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 383
Target Start/End: Original strand, 19979853 - 19979921
Alignment:
Q  315 tgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    |||| |||||||||||||||||||||||||  ||||  |  ||||||||||||  ||||||||| ||||    
T  19979853 tgcgtttttacgattgtcgattttgctcttctcttttgacctgaagcaaaatcccgattttgaccacct 19979921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 23172325 - 23172265
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattt 322  Q
    ||||| |||||||||||||||||| |  || ||| |||| |||||||||||||| ||||||    
T  23172325 atttcctatatcgattctacaaaagtctttgagtaaaattcttcgattttgattacgattt 23172265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 94 - 327
Target Start/End: Complemental strand, 25539224 - 25538977
Alignment:
Q  94 ttcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatt 193  Q
    |||||||||||| ||||||||||||| ||||||  || ||||||||||       | |||||||| ||||||||||||||||||||||||||||||||||    
T  25539224 ttcatacaaaatcgcaggattttaaagggttttgtagaattttgtccatttttttagtcatttatttataagtattttgtggactttaaactgagtcatt 25539125  T
Q  194 tatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------atttcttatatcgattct 279  Q
    ||||| |||||||||| ||||||||||||||||||||| || |||||||| ||| || ||||||||||              |||| |||||||||||||    
T  25539124 tatgactatatacaatatataacatatatttagcattatttctgttttggtaaaatctatcgattttgattgcaattttacaattttttatatcgattct 25539025  T
Q  280 acaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    |||||| ||||| ||| ||||||||  |||||||||||||||||||||    
T  25539024 acaaaagtagttcagtaaaatcctttaattttgattgcgattttacga 25538977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 95 - 264
Target Start/End: Original strand, 19491983 - 19492153
Alignment:
Q  95 tcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcattt 194  Q
    ||||||||||| ||||||||||||| |||||| ||| ||||| ||||       | ||||||||||||||||||| |||||||||||||| |||| ||||    
T  19491983 tcatacaaaatcgcaggattttaaagggttttgaagaattttatccattttgttagtcatttatgtataagtattctgtggactttaaacagagttattt 19492082  T
Q  195 atgattatatacaatttataacatatatttagcattact-tttgttttggcaaagtccatcgattttgatt 264  Q
    |||| |||||||||||||||||||||||||||||||| | ||| |||||| ||| ||||||||||||||||    
T  19492083 atgactatatacaatttataacatatatttagcattattattttttttggtaaaatccatcgattttgatt 19492153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 151 - 344
Target Start/End: Original strand, 16766894 - 16767100
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||| ||||||||||| ||| ||    
T  16766894 tcatttatgt-taagttttttgtggactttaaactgagtcatttatgactgtatacaatttataacaaatatttagcattatttttgttttggtaaa-tc 16766991  T
Q  251 catcgatttt--------------gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga-ttgtcgat 335  Q
    | | ||||||              |||||||||||||||||||| |||| ||||| ||| ||||||||| |||||||||||||||||| || || |||||    
T  16766992 ctttgattttgattgcgattttacgatttcttatatcgattctataaaagtagttgagtaaaatccttcaattttgattgcgattttatgatttttcgat 16767091  T
Q  336 tttgctctt 344  Q
    |||||||||    
T  16767092 tttgctctt 16767100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 151 - 383
Target Start/End: Original strand, 19245690 - 19245942
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaag 248  Q
    ||||||||| | |||||||||||||||||||||||  ||||||||||||| || || |||||| || |||||||||| ||||| |||| |||||| | |     
T  19245690 tcatttatgcaaaagtattttgtggactttaaactttgagtcatttatgactacatgcaatttctatcatatatttaacattatttttattttggtagaa 19245789  T
Q  249 tccatcgatttt------------gattt------cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattg 330  Q
    |||||||||||             |||||      | |||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||     
T  19245790 tccatcgatttgattacgattttcgattttactatcctatatcgattctacaaaagtagttaagtaaaatccttagattttgattgcgattttacgattt 19245889  T
Q  331 tcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    | ||||||||| || |||||||| |||||||||||||  ||||||||||||||    
T  19245890 ttgattttgctattccctttcaacttgaagcaaaatcccgattttgacaacct 19245942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 151 - 344
Target Start/End: Original strand, 27406898 - 27407106
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||| |||||||||||  || ||    
T  27406898 tcatttatgtatatgtattttgtggactttaaactgagtcatttattactatatacagtttataatatatatttagcattatttttgttttggtgaaatc 27406997  T
Q  251 catcgattttgat--------------ttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga-ttgtcgat 335  Q
    |||| ||||||||              ||||||||| |||| | ||||| ||||| ||| |||| ||| ||||||||||||||| |||||| || |||||    
T  27406998 catcaattttgattgcgattttatgatttcttatattgattatccaaaagtagttgagtaaaattcttggattttgattgcgatattacgatttttcgat 27407097  T
Q  336 tttgctctt 344  Q
    |||||||||    
T  27407098 tttgctctt 27407106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 264
Target Start/End: Complemental strand, 5395596 - 5395431
Alignment:
Q  99 acaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataa-gtattttgtggactttaaactgagtcatttatg 197  Q
    ||||||||||||||||||||| ||| || || |||||||||||       | |||||||||||||| |||||| |||||||||||| || ||||||||||    
T  5395596 acaaaattgcaggattttaaagggtcttaaatgattttgtccatttttt-agtcatttatgtataaagtatttggtggactttaaattgggtcatttatg 5395498  T
Q  198 attatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    | ||||||||||||||||||||| || | ||||| ||||||||||| ||| ||  ||||||||||||    
T  5395497 actatatacaatttataacatattttgaacattatttttgttttggtaaaatctttcgattttgatt 5395431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 31023272 - 31023522
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||||||||||||||||||| |||||  ||||||||| |||||||||||  |           || |||||||||||||||| ||||||  ||||    
T  31023272 tttattcactttcaacgactcaaattcatagtagaatcctaaaataggcaaaattat-----------attaaaatcgcacaaaatcttgaaatctatac 31023360  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatttatgatt 200  Q
    ||||| | ||||||||||| || ||| ||| |||||||| |       | |||||| ||||||||||||| |||||||| ||||| | |  ||||||| |    
T  31023361 aaaatcgtaggattttaaaagggtttgaagaattttgtc-aattttttagtcatttttgtataagtatttggtggactt-aaactaattagtttatgact 31023458  T
Q  201 atatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    || ||| |||||||||||||||||| ||||| |||| |||||| ||| ||||||||||||||||    
T  31023459 atttactatttataacatatatttaacattatttttattttggtaaaatccatcgattttgatt 31023522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 41002119 - 41002232
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagt 249  Q
    ||||||||||||| |||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| | | |    
T  41002119 tcatttatgtatatgtattttgtggactttgaactttagtcatttatgactatatgcaatttataacatatatttagcattatttttgttttggtagaat 41002218  T
Q  250 ccatcgattttgatt 264  Q
    || ||||||||||||    
T  41002219 cc-tcgattttgatt 41002232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 974431 - 974545
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaag 248  Q
    ||||||||||||| |||||||||||||||| ||||   |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| | |     
T  974431 tcatttatgtatatgtattttgtggactttgaactttaagtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtagaa 974530  T
Q  249 tccatcgattttgatt 264  Q
    ||| ||||||||||||    
T  974531 tcc-tcgattttgatt 974545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 264
Target Start/End: Original strand, 34841705 - 34841801
Alignment:
Q  168 ttttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||  |||| |||||||| |  | | ||||||||||||||||    
T  34841705 ttttgtggactttaaactgagttatttatgactatatacaatttataacatatatttattattatttttgtttggatagaatccatcgattttgatt 34841801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 5395712 - 5395613
Alignment:
Q  17 gactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggatttt 116  Q
    |||||||||||||||| |||||  || |||||||||||| | |||||| | |||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  5395712 gactcaaatccatagcagaatctcaaaataggcaaaatcttagtaaaaatgcatcaaaatctcacaaaatcatgaaattcaaacaaaattgcaggatttt 5395613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 151 - 383
Target Start/End: Original strand, 8428332 - 8428575
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    |||||||||||||| ||||||||||||||   || |||| |||||||| |||||| ||||||||| ||||| ||||||||| ||||||||||| | | |     
T  8428332 tcatttatgtataaatattttgtggactt---accgagtaatttatgactatatataatttataatatatagttagcattatttttgttttggtataatt 8428428  T
Q  251 catcgattt--------------tgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgatt 336  Q
    |||||||||               ||||| | |||| |||||||||||| ||||| ||  ||||||||||||||||||||||||||||  ||| | ||||    
T  8428429 catcgatttgtattgcgattttacgatttttgatattgattctacaaaaatagttgagcaaaatccttcgattttgattgcgattttagaatttttgatt 8428528  T
Q  337 ttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    || || || |||||| |  | ||||||||||  ||||||||||||||    
T  8428529 tttctattccctttcgacctaaagcaaaatcccgattttgacaacct 8428575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 21869357 - 21869243
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaag 248  Q
    ||||||||||||| |||||||||||||||| ||||   ||| |||||||| ||||| |||||||||||||||||||||||| | ||||||||||| | |     
T  21869357 tcatttatgtatatgtattttgtggactttgaactttaagttatttatgactatatgcaatttataacatatatttagcataatttttgttttggtagaa 21869258  T
Q  249 tccatcgattttgatt 264  Q
    | ||||||||||||||    
T  21869257 t-catcgattttgatt 21869243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 266
Target Start/End: Original strand, 15627771 - 15627966
Alignment:
Q  73 aaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtcca--nnnnnnnaatcatttatgtataagtattt 170  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||| |||||  ||||||||||||||         | |||||||| |||||||||||    
T  15627771 aaatcgcacaaaactgtgaaattcatacaaaatcacaggattttaaagggtttcaaaggattttgtccatttttttttagtcatttatatataagtattt 15627870  T
Q  171 tgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatttc 266  Q
    || | |||||||||| ||||||||| ||  ||||| |||||| |||||||| ||| | ||  |||| | |||  ||| |||||||||||| |||||    
T  15627871 tgcgcactttaaactaagtcatttacgacaatatataatttaaaacatatacttaaccttttttttttgttgataaaatccatcgattttaatttc 15627966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 383
Target Start/End: Complemental strand, 13502638 - 13502450
Alignment:
Q  208 atttataacatatatttagcattacttttgttttggcaaagtccatcgatttt--------------gatttcttatatcgattctacaaaattagttaa 293  Q
    ||||||||||||||||||  |||| ||||||||||| ||| ||||||||||||              |||||||||||| |||||||||||| ||||| |    
T  13502638 atttataacatatatttaatattatttttgttttggtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagttga 13502539  T
Q  294 gtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
     | | ||||||| ||||||||| ||||||||||||| |||||||| ||||| |||||| | ||||| |||||| |  |||||||||||||    
T  13502538 ctaatatccttcaattttgattacgattttacgattttcgattttactcttccctttccacttgaaacaaaat-tcaattttgacaacct 13502450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 20063955 - 20064076
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||| |||||||||||||||||| |  || ||| |||| |||||||||||||||||||||||||| | ||||||||||| || ||||||||  |||||     
T  20063955 atttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagt 20064054  T
Q  362 aaaatcttgattttgacaacct 383  Q
    |||  |  ||||||||||||||    
T  20064055 aaagccccgattttgacaacct 20064076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 187 - 344
Target Start/End: Complemental strand, 35565939 - 35565769
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt--------------tcttatat 272  Q
    |||||||||||| ||||||||||||||||||||||||||| |||    || |||||| ||| ||||||||||||||||              ||||||||    
T  35565939 agtcatttatgactatatacaatttataacatatatttagtatt----tttttttggtaaaatccatcgattttgattgtgattttatgatttcttatat 35565844  T
Q  273 cgattctacaaaattagttaagtca---aatccttcgattttgattgcgattttacgattgtcgattttgctctt 344  Q
    ||||||||||||| ||||| ||| |   ||||||||||||||  |||||||||||| ||| ||||||||||||||    
T  35565843 cgattctacaaaagtagttgagtaataaaatccttcgattttagttgcgattttacaattatcgattttgctctt 35565769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 34577986 - 34578096
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    |||||||||||| |||||||||||||||| ||||  |||||||||||| |||   |||||||||||||||||||| ||||| ||||||||||| | | ||    
T  34577986 catttatgtatatgtattttgtggactttgaactttagtcatttatgactatg--caatttataacatatatttaacattatttttgttttggtagaatc 34578083  T
Q  251 catcgattttgatt 264  Q
    | ||||||||||||    
T  34578084 c-tcgattttgatt 34578096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 20034255 - 20034144
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    |||||||||| | |||||||||||| ||| ||||  |||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| | | ||    
T  20034255 catttatgta-atgtattttgtggattttgaactttagtcatttatgagtatatgcaatttataacatatatttaacattatttttgttttggtagaatc 20034157  T
Q  251 catcgattttgatt 264  Q
    | ||||||||||||    
T  20034156 c-tcgattttgatt 20034144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 26251621 - 26251708
Alignment:
Q  153 atttatgtataagtattttgtggactttaaact---gagtcatttatgattatatacaatttataacatatatttagcattacttttg 237  Q
    |||||| |||| ||||||||||||||| |||||   ||||||||||||| ||||| |||||||||||||||||||| ||||| |||||    
T  26251621 atttatttataggtattttgtggacttgaaacttttgagtcatttatgactatatgcaatttataacatatatttaccattatttttg 26251708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 154 - 264
Target Start/End: Original strand, 7301884 - 7301994
Alignment:
Q  154 tttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtcca 252  Q
    |||||| ||| |||||||||||||||| ||||  ||||||||||||  |||| |||||||||||||||||||| ||||| |||| |||||| | | |||     
T  7301884 tttatgcatatgtattttgtggactttgaactttagtcatttatgaccatatgcaatttataacatatatttaacattatttttattttggtagaatcc- 7301982  T
Q  253 tcgattttgatt 264  Q
    ||||||||||||    
T  7301983 tcgattttgatt 7301994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 19262213 - 19262134
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    |||||||||||||||||||||||| |  || ||| ||||| ||||||||||||||||||||||||| |  ||||||||||    
T  19262213 atttcttatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgagtcccgattttgct 19262134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 1405015 - 1405103
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttccttt 350  Q
    ||||| |||||||||||||||||| |  || ||| |||||||||||||||||||||||||||| || |  |||||||||| || |||||    
T  1405015 atttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtaccgattttgctattcccttt 1405103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 13503063 - 13502947
Alignment:
Q  73 aaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttg 172  Q
    |||||||||||| ||||||||| ||| ||||||  |||||||||||| ||||||  ||||||| || ||         ||||||||||||||||||||||    
T  13503063 aaatcgcacaaactcgtgaaatccatgcaaaatcacaggattttaaaaggttttggaggatttagttcatttttttg-tcatttatgtataagtattttg 13502965  T
Q  173 tggactttaaactgagtc 190  Q
    |||| |||||||||||||    
T  13502964 tggagtttaaactgagtc 13502947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 382
Target Start/End: Complemental strand, 15588842 - 15588632
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------attt 265  Q
    |||||| |||||||||||||||||||| ||||||  ||||||||||| ||||   || |||||| ||| |||||||||||||              ||||    
T  15588842 taaactaagtcatttatgattatataccatttat--catatatttagtatta---tttttttggtaaaatccatcgattttgattgcgattttataattt 15588748  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
    ||||||||||| ||||  || || || ||| |||||||||||||||| ||||||||||| ||||||||||||| || ||  ||||| |  ||||||||||    
T  15588747 cttatatcgatcctac-gaagtaattgagtaaaatccttcgattttggttgcgattttatgattgtcgatttttcttttctctttcgacctgaagcaaaa 15588649  T
Q  366 tcttgattttgacaacc 382  Q
    |||  || |||||||||    
T  15588648 tctcaatattgacaacc 15588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 27524122 - 27524038
Alignment:
Q  160 tataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    |||| |||||||||||||||| ||||  | |||||||||| ||||| |||||||||| ||||||||| ||||| |||||||||||    
T  27524122 tatatgtattttgtggactttgaactttaatcatttatgaatatatgcaatttataatatatatttaacattatttttgttttgg 27524038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 29661100 - 29661176
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattt 337  Q
    |||||||||||||||| |||||||| ||||| | | ||| ||||||||||| |||||| |||||||||| |||||||    
T  29661100 gatttcttatatcgatactacaaaagtagtttaataaaaaccttcgattttaattgcggttttacgattttcgattt 29661176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 974576 - 974635
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    |||||||||||||||||| |  || ||| |||||||||||||||||||||||||||||||    
T  974576 tatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 974635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 24473931 - 24474037
Alignment:
Q  156 tatgtataagtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccat 253  Q
    ||||||||||||||||||||| ||| ||||   |||||||||| | ||||| ||||||||| ||| |||||| ||||| ||||||||||| | | ||||     
T  24473931 tatgtataagtattttgtggaattttaacttttagtcatttataactatatgcaatttatatcatctatttatcattaattttgttttggtagaatccaa 24474030  T
Q  254 cgatttt 260  Q
    |||||||    
T  24474031 cgatttt 24474037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 20034110 - 20034040
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||| |  || ||| ||||||||| ||||||||||||||||||||| | |||||||||||    
T  20034110 atcgattctacaaaagtccttgagtaaaatccttcaattttgattgcgattttacgagtctcgattttgct 20034040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 27523984 - 27523914
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||| |  || ||| ||||||||||||||||||||||||||||||| |  ||||||||||    
T  27523984 atcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgct 27523914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 31237969 - 31237885
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatattta-gcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| |||||||||||||||||||| |||||||||||||||| | | |||| || | |||||| ||| ||||||||||||||||    
T  31237969 taaactaagtcatttatgattatataccatttataacatatattcatgtatta-ttattttttggtaaaatccatcgattttgatt 31237885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 31578141 - 31578197
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattactttt 236  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||| |||| ||||    
T  31578141 taaactaagtcatttatgactatataccatttataacatatatttagtattattttt 31578197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 8428207 - 8428306
Alignment:
Q  17 gactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggatttt 116  Q
    ||||||||| |||||  ||||| ||| |||||||||||| | ||||||    |||||||||  ||||||||  |||||||||||||||||| ||||||||    
T  8428207 gactcaaattcataggagaatcttaaaataggcaaaatcttagtaaaatcgtatcaaaatcctacaaaatcccgaaattcatacaaaattgaaggatttt 8428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 34167571 - 34167641
Alignment:
Q  312 gattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    |||||||||||||||||| ||||||||||| || |||||| || ||||  |||||||||||||| |||||||    
T  34167571 gattgcgattttacgattttcgattttgctattccctttc-atctgaaataaaatcttgatttttacaacct 34167641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 34577808 - 34577855
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggatttt 116  Q
    |||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  34577808 atcaaaatcgcacaaaatcgtggaattcattcaaaatcgcaggatttt 34577855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 7302023 - 7302093
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||| |  || ||| ||||||||||||||||||||| ||||||||| |  ||||||||||    
T  7302023 atcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgct 7302093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 21869227 - 21869097
Alignment:
Q  253 tcgattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttca 352  Q
    ||||||||| | || |||||||||||||||||| |  || | | ||||||||||||||| |||||||||||| || |  ||||||| || || ||||||     
T  21869227 tcgattttgctatcatatatcgattctacaaaagtcattgaataaaatccttcgattttaattgcgattttaagagtcccgatttttctattccctttcg 21869128  T
Q  353 atttgaagcaaaatcttgattttgacaacct 383  Q
    | |||||| ||| ||  ||||||||| ||||    
T  21869127 acttgaagtaaagtcccgattttgacgacct 21869097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 19257539 - 19257490
Alignment:
Q  70 tcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaa 119  Q
    ||||||||||||||||| ||||||| ||| |||||| |||||||||||||    
T  19257539 tcaaaatcgcacaaaattgtgaaatccattcaaaatcgcaggattttaaa 19257490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 27749785 - 27749713
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatata 221  Q
    |||||||||| || ||||||||| |||||| ||||  ||||||||||||| || || ||||||||||||||||    
T  27749785 tcatttatgtgtatgtattttgtagactttgaactttgagtcatttatgactacatgcaatttataacatata 27749713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 36430088 - 36430145
Alignment:
Q  270 tatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    |||||||||||||||| |  || ||| | |||||||||||||||||||||||||||||    
T  36430088 tatcgattctacaaaaattattgagtaatatccttcgattttgattgcgattttacga 36430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 23863351 - 23863283
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
    |||||| ||||||||| |||||||||||||| ||| ||||||||| ||  ||||| | |||||||||||    
T  23863351 aaatccatcgattttggttgcgattttacgaatgttgattttgcttttctctttcgacttgaagcaaaa 23863283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 380
Target Start/End: Complemental strand, 31237867 - 31237755
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatc 367  Q
    |||||||||| ||||||| |  || ||| |||||||||||| |||||||||||||||||| |  ||||||| || || |||||  |  ||||| ||| ||    
T  31237867 tatatcgattttacaaaagtccttgagtaaaatccttcgatattgattgcgattttacgagtcccgattttactattcccttttgaactgaagtaaagtc 31237768  T
Q  368 ttgattttgacaa 380  Q
     ||||||||||||    
T  31237767 ctgattttgacaa 31237755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 13503121 - 13503066
Alignment:
Q  2 ttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatcct 57  Q
    |||||||||||||||| |||||||||||| |  ||| |||| ||||||||||||||    
T  13503121 ttattcactttcaacggctcaaatccataacaaaattctaaaataggcaaaatcct 13503066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 5434160 - 5434210
Alignment:
Q  333 gattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    ||||||||| |  |||||| |||||||||||||||||||||||| ||||||    
T  5434160 gattttgctgtcccctttcgatttgaagcaaaatcttgattttgtcaacct 5434210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 339
Target Start/End: Original strand, 15627991 - 15628053
Alignment:
Q  277 tctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttg 339  Q
    ||||||||| ||||| ||| ||| ||||||||||||||| | ||||||| ||| |||||||||    
T  15627991 tctacaaaagtagttgagtaaaaaccttcgattttgatttccattttacaattttcgattttg 15628053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16766759 - 16766809
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaa 51  Q
    ||||||||| |||||||| ||||||||||||| ||||||||| ||| ||||    
T  16766759 tttattcaccttcaacgaatcaaatccatagcagaatcctaaaataagcaa 16766809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 241
Target Start/End: Original strand, 19519529 - 19519571
Alignment:
Q  199 ttatatacaatttataacatatatttagcattacttttgtttt 241  Q
    |||||| |||||||||||||||||||||||||| ||| |||||    
T  19519529 ttatatgcaatttataacatatatttagcattattttggtttt 19519571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 30433047 - 30433109
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttta 324  Q
    ||||| ||||||||||||| |||| |  || ||| ||||| ||||||||||||||||||||||    
T  30433047 atttcctatatcgattctataaaagtccttgagtaaaatcattcgattttgattgcgatttta 30433109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 16767184 - 16767237
Alignment:
Q  292 aagtcaaatccttcgattttgattgcgattttacga-ttgtcgattttgctctt 344  Q
    |||| ||||||||| |||||||||||||||||| || || ||||||||||||||    
T  16767184 aagtaaaatccttcaattttgattgcgattttatgatttttcgattttgctctt 16767237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 31238007 - 31237975
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  31238007 aaatccatcgattttgattgcgattttacgatt 31237975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 34841784 - 34841820
Alignment:
Q  298 aatccttcgattttgattgcgattttacgattgtcga 334  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  34841784 aatccatcgattttgattgcgattttacgattttcga 34841820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 36429985 - 36430068
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| ||| |||||||| ||||||  |||| |||||||||||||| |||  |||| ||| || ||| ||||||||||||||||    
T  36429985 taaactaagtaatttatgactatatatcatttctaacatatatttagtatt-tttttttttaggtaaaatccatcgattttgatt 36430068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 6e-47; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 4841999 - 4841738
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||| ||||||||||||||||| |||| |||||| |  ||||||||||| || ||||||   | |||||||||||||||||||||| ||||||||    
T  4841999 tttattcaccttcaacgactcaaatccgtagcagaatcccataataggcaaaatactagtaaaatcgcttcaaaatcgcacaaaatcgtgagattcatac 4841900  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatttatgatt 200  Q
    || || ||| ||||||||| ||||||  |||||||||| ||       | ||||||||||||||  ||||| |||||||||||| |||| ||||||||      
T  4841899 aagatcgcatgattttaaagggttttggaggattttgtgcatttttttagtcatttatgtataaacattttatggactttaaaccgagtaatttatga-- 4841802  T
Q  201 atatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
     ||||||||||||||||||||||| ||||   ||||||||||| ||| | ||||||||||||||    
T  4841801 ctatacaatttataacatatattttgcatattttttgttttggtaaaatacatcgattttgatt 4841738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 380
Target Start/End: Original strand, 23897948 - 23898160
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt--------------t 265  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||| |||  |||| |||||| ||| ||||||||||||||||              |    
T  23897948 taaactaagtcatttatgactatataccatttataacatatatttagtatttttttt-ttttggtaaaatccatcgattttgattgagattttacaattt 23898046  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
    ||||||||||||||||||| | |||| ||| |||||||||||||||| || ||||||||||||||||||||||||||||  | ||| |  ||||||||||    
T  23898047 cttatatcgattctacaaagt-agttgagtaaaatccttcgattttggtttcgattttacgattgtcgattttgctcttctcattcgacctgaagcaaaa 23898145  T
Q  366 tcttgattttgacaa 380  Q
    ||  |||||||||||    
T  23898146 tcccgattttgacaa 23898160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 31407401 - 31407495
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||  |||| |||||||||||||||||||| ||||| |||||||||||    
T  31407401 tcatttatgtataagtattttgtggaatttaaactttgagtcatttatgacaatatgcaatttataacatatatttaacattatttttgttttgg 31407495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 18490661 - 18490548
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||  | ||||||| |||||||||||||||||| ||||| ||||| ||||| | | ||    
T  18490661 tcatttatgtatatgtattttgtggactttatactgagttatttagcactatatacgatttataacatatatttatcattatttttgatttggtagaatc 18490562  T
Q  251 catcgattttgatt 264  Q
    |||| |||||||||    
T  18490561 catcaattttgatt 18490548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 264
Target Start/End: Complemental strand, 20400099 - 20399995
Alignment:
Q  162 taagtattttgtggactttaaac--tgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattt 259  Q
    |||||||||||||||||||||||  ||||| |||||||| ||||| |||||||||||||||||||| ||||| |||||||||||   | |||||||||||    
T  20400099 taagtattttgtggactttaaacattgagttatttatgactatatgcaatttataacatatatttatcattatttttgttttggtggaatccatcgattt 20400000  T
Q  260 tgatt 264  Q
    |||||    
T  20399999 tgatt 20399995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 383
Target Start/End: Complemental strand, 30912305 - 30912182
Alignment:
Q  260 tgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaa 359  Q
    |||||||||||||||||| ||||||| ||||| | | ||||||||| |||||| ||| |||||||||||| ||||||||||| ||  |||||||  ||||    
T  30912305 tgatttcttatatcgattttacaaaagtagttgaataaaatccttcaattttggttgagattttacgattatcgattttgctattctctttcaacctgaa 30912206  T
Q  360 gcaaaatcttgattttgacaacct 383  Q
    |||||||   ||||||||||||||    
T  30912205 gcaaaattccgattttgacaacct 30912182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 166 - 243
Target Start/End: Complemental strand, 5422665 - 5422589
Alignment:
Q  166 tattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    |||||||||||||||||| || ||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  5422665 tattttgtggactttaaattg-gtcatttatgactatatataatttataacatatatttagcattatttttgttttgg 5422589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 20432484 - 20432411
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    |||||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||| |||||||||||    
T  20432484 tatatcgattctacaaaactagttaagtaaaattcttcaattttgattgcgattttacgattttcgattttgct 20432411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 18490965 - 18490780
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||| |||||||||| ||| |||||||  ||||| || |  | ||||||||| |||||| | | |||||||| |||||||||||||||| |||||    
T  18490965 tttattcaccttcaacgactgaaacccatagcataatcccaaaaatgacaaaatcctagtaaaattgcttcaaaatcacacaaaatcgtgaaatccatac 18490866  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactg 186  Q
    ||||||  |  ||||||||   |||| ||||||||| ||||       | ||||||||||| |||||||||||| |||||||||||    
T  18490865 aaaattttataattttaaagaattttgaaggattttatccatttttttagtcatttatgtacaagtattttgtgaactttaaactg 18490780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 33593187 - 33593072
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaag 248  Q
    ||||||||||||||||||||||| ||||| |||||  |||||| | |||| ||||| ||||||||||||||| |||| ||||| |||| |||||| | |     
T  33593187 tcatttatgtataagtattttgtagacttgaaactttgagtcaataatgactatatgcaatttataacatatgtttaacattatttttcttttggtagaa 33593088  T
Q  249 tccatcgattttgatt 264  Q
    ||||||||||||||||    
T  33593087 tccatcgattttgatt 33593072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 27890480 - 27890573
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    ||||||| |||| |||||||||||||||| ||||   | |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  27890480 catttatatatatgtattttgtggactttgaactttaactcatttatgactatatgcaatttataacatatatttagcattatttttgttttgg 27890573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 11327459 - 11327338
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||| |||||||||||||||||| |  || ||| |||| |||||||||||||||||||||||||| | ||||||||||| || ||||||||  |||||     
T  11327459 atttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagt 11327360  T
Q  362 aaaatcttgattttgacaacct 383  Q
    |||  |  ||||||||||||||    
T  11327359 aaagccccgattttgacaacct 11327338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 19748565 - 19748686
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||| |||||||||||||||||| |  || ||| ||||||||||||||||||||||||||||||| |  |||||||||| || ||||||||  ||||      
T  19748565 atttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctattccctttcaacctgaatt 19748664  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||| ||  ||||||||||||||    
T  19748665 aaagtcccgattttgacaacct 19748686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 20432629 - 20432515
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaag 248  Q
    ||||||||||| ||||||||||||||||| ||| |  |||| |||||||| ||||| |||||||||||||||| |||| |||| |||||||||||   |     
T  20432629 tcatttatgtaaaagtattttgtggacttaaaattttgagttatttatgactatatgcaatttataacatata-ttagtattatttttgttttggtggaa 20432531  T
Q  249 tccatcgattttgatt 264  Q
    ||||||||||||||||    
T  20432530 tccatcgattttgatt 20432515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 367
Target Start/End: Complemental strand, 2912158 - 2912053
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||||||||| | ||||||||||| ||||| ||| ||||||||| |||| ||||  |||||||||||| ||||||| ||||||  |||||||  ||||||    
T  2912158 atttcttataacaattctacaaaagtagttgagtaaaatccttcaatttcgattatgattttacgattatcgatttcgctcttctctttcaacctgaagc 2912059  T
Q  362 aaaatc 367  Q
    ||||||    
T  2912058 aaaatc 2912053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 7223747 - 7223868
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||| |||||||||||||||||| |  || ||| ||||||||||||||||||||| ||||||||| |  |||||||||| || |||||| |  |||||     
T  7223747 atttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgctattccctttcgacctgaagt 7223846  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||| ||  ||||||||||||||    
T  7223847 aaagtcccgattttgacaacct 7223868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 15528007 - 15527918
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    ||||| |||||||||||||||||| |  || ||| ||||||||||||||||||||||||||| ||| |  |||||||||| |||||||||    
T  15528007 atttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttccgagttccgattttgctatttcctttc 15527918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 380
Target Start/End: Complemental strand, 33593054 - 33592930
Alignment:
Q  255 gattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaat 354  Q
    ||||||| | || |||||| ||||||||||| ||||| ||| ||||| |||||||| |||||| ||||||||||| || |||||| | || |||||| ||    
T  33593054 gattttgctatcctatatcaattctacaaaagtagttgagt-aaatcattcgatttcgattgcaattttacgattttcaattttgttattccctttcgat 33592956  T
Q  355 ttgaagcaaaatcttgattttgacaa 380  Q
     ||||||||||||  |||||||||||    
T  33592955 atgaagcaaaatcccgattttgacaa 33592930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 3573969 - 3573866
Alignment:
Q  94 ttcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtcatt 193  Q
    |||| ||||||||||| ||| ||||| |||||| ||| ||||| ||||       | |||||||||| ||||||||||||||||||||| ||||||||||    
T  3573969 ttcaaacaaaattgcatgatgttaaagggttttgaagaattttttccatttttttagtcatttatgtttaagtattttgtggactttaatctgagtcatt 3573870  T
Q  194 tatg 197  Q
    ||||    
T  3573869 tatg 3573866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 7622004 - 7621909
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact---gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    ||||||||||||||||||||| || |||| |||||   || |||||||||| ||||  |||||||||| ||||||||| ||||| |||||||||||    
T  7622004 tcatttatgtataagtattttatgaacttgaaacttttgaatcatttatgactataggcaatttataatatatatttatcattatttttgttttgg 7621909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 381
Target Start/End: Complemental strand, 26053288 - 26053074
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------attt 265  Q
    |||||| ||| |||||||| ||||||| |||||||||||||| |||| |||| || | |||||| ||| |||||||||||||              ||||    
T  26053288 taaactaagttatttatgactatataccatttataacatatagttagtatta-ttattttttggtaaaatccatcgattttgattgcgattttacaattt 26053190  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
    |  ||||||||||||||||| |  || ||| ||||| |||||||||||||| |||||||||| |  | |||||||| ||||||||| |  ||||| |||     
T  26053189 ccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgacctgaagtaaag 26053090  T
Q  366 tcttgattttgacaac 381  Q
    || |||||||||||||    
T  26053089 tcctgattttgacaac 26053074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 381
Target Start/End: Complemental strand, 26073341 - 26073127
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------attt 265  Q
    |||||| ||| |||||||| ||||||| |||||||||||||| |||| |||| || | |||||| ||| |||||||||||||              ||||    
T  26073341 taaactaagttatttatgactatataccatttataacatatagttagtatta-ttattttttggtaaaatccatcgattttgattgcgattttacaattt 26073243  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
    |  ||||||||||||||||| |  || ||| ||||| |||||||||||||| |||||||||| |  | |||||||| ||||||||| |  ||||| |||     
T  26073242 ccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgacctgaagtaaag 26073143  T
Q  366 tcttgattttgacaac 381  Q
    || |||||||||||||    
T  26073142 tcctgattttgacaac 26073127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 645415 - 645470
Alignment:
Q  185 tgagtcatttatgattatatacaatttataacatatatttagcattacttttgttt 240  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||| | ||||||    
T  645415 tgagtcatttatgactatatgcaatttataacatatatttagcattattattgttt 645470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 3573797 - 3573732
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    |||||||||||| ||||||||| | ||||| ||| || |||| |||||||||||||||||||||||    
T  3573797 atttcttatatctattctacaagagtagttgagtaaattcctacgattttgattgcgattttacga 3573732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 17103427 - 17103548
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||| |||||||||||||||||| |  || ||| |||||||||| | |||||||||||||||||| |   ||||||| | || |||||| | ||||||     
T  17103427 atttcctatatcgattctacaaaagtccttgagtaaaatccttcggtattgattgcgattttacgagtcctgattttgttattccctttcgacttgaagt 17103526  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||| ||  ||||||||||||||    
T  17103527 aaagtcccgattttgacaacct 17103548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 31108252 - 31108341
Alignment:
Q  153 atttatgtataagtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatatatttagcattacttttgttttg 242  Q
    ||||||||||| |||||||| ||||||| ||||   |||||||||||| |||   ||||||||||||| |||||||| ||||||||||||||    
T  31108252 atttatgtatatgtattttgcggactttgaactttaagtcatttatgactatg--caatttataacatgtatttagctttacttttgttttg 31108341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 383
Target Start/End: Original strand, 27890611 - 27890739
Alignment:
Q  255 gattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaat 354  Q
    ||||||| | || |||||||||||||||||| |  || ||| ||||||||| ||||||||| ||||||||||| |  | ||||| ||  | ||||||||     
T  27890611 gattttgctatcctatatcgattctacaaaagtccttgagtaaaatccttcaattttgattacgattttacgagttccaattttactactccctttcaac 27890710  T
Q  355 ttgaagcaaaatcttgattttgacaacct 383  Q
    |||||| ||| ||| || |||||||||||    
T  27890711 ttgaagtaaagtctcgaatttgacaacct 27890739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 5422828 - 5422725
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||| |||||||||||||||| |||||  ||| |  | | ||||| | |||| ||||||   ||||||||||||||||||| ||| |||||||||    
T  5422828 tttattcaccttcaacgactcaaatctatagcaaaattccgaaagaggcagactcctagtaaaatcgcatcaaaatcgcacaaaattgtggaattcatac 5422729  T
Q  101 aaaa 104  Q
    ||||    
T  5422728 aaaa 5422725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 383
Target Start/End: Original strand, 21354942 - 21355028
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    |||||| |||||||||||||||||||||||| |   |||||| || || |||||||| |||||| ||||||   |||||||||||||    
T  21354942 aaatccatcgattttgattgcgattttacgagtcctgatttttctattccctttcaacttgaagtaaaatcccaattttgacaacct 21355028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 375
Target Start/End: Complemental strand, 18490565 - 18490488
Alignment:
Q  298 aatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgatttt 375  Q
    ||||| || ||||||||||||||||||||| | |||||||||||| | || ||| |  |||| |||||||||||||||    
T  18490565 aatccatcaattttgattgcgattttacgaatttcgattttgctcctcccattcgacgtgaaacaaaatcttgatttt 18490488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 22498337 - 22498272
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||| |||||||||||||||||| |  || ||| ||||| ||| |||||||||||||||||||||    
T  22498337 atttcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgattgcgattttacga 22498272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 4841715 - 4841659
Alignment:
Q  273 cgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgatt 329  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||||| |||||| |||||    
T  4841715 cgattctacaaaagtagttgagtaaaatcctttgattttgattgtgatttttcgatt 4841659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 344
Target Start/End: Complemental strand, 10508886 - 10508846
Alignment:
Q  304 tcgattttgattgcgattttacgattgtcgattttgctctt 344  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  10508886 tcgaatttggttgcgattttacgattgtcgattttgctctt 10508846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 341
Target Start/End: Complemental strand, 17543620 - 17543548
Alignment:
Q  269 atatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||||| |  || ||| ||||||||||||||||||| |||||||| || |  ||||||||||    
T  17543620 atatcgattctacaaaagtccttgagtaaaatccttcgattttgatttcgattttatgagtcccgattttgct 17543548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 30912404 - 30912348
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattactttt 236  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||| |||| ||||    
T  30912404 taaactaagtcatttatgattatatatcatttatcacatatatttagtattattttt 30912348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 7223649 - 7223692
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatt 223  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||    
T  7223649 taaactaagtcatttatgactatataccatttataacatatatt 7223692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 7918333 - 7918259
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||| ||||||  |||||||||||| |||||| ||||   || |||||| ||| ||||||||||||||||    
T  7918333 agtcatttatgactatatatcatttataacataaatttagtatta---tttttttggtaaaatccatcgattttgatt 7918259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 15528102 - 15528051
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcatta 231  Q
    |||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  15528102 taaactaagtcatttataactatataccatttataacatatatttagtatta 15528051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 17543732 - 17543681
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcatta 231  Q
    |||||| ||||||||| || ||||||| ||||||||||||||||||| ||||    
T  17543732 taaactaagtcatttacgactatataccatttataacatatatttagtatta 17543681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 21354877 - 21354928
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcatta 231  Q
    |||||| ||| |||||||| ||||||| ||||||||||||||||||| ||||    
T  21354877 taaactaagtaatttatgactatataccatttataacatatatttagtatta 21354928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 33583559 - 33583497
Alignment:
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgatt 329  Q
    |||||||||||||||||||| |  |||||| ||||| |||||||||||||  ||||||||||||    
T  33583559 cttatatcgattctacaaaagtccttaagtaaaatc-ttcgattttgattttgattttacgatt 33583497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 7857099 - 7857148
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaac--tgagtcatttatga 198  Q
    ||||||||||||||||||||||||||| | ||||  ||||||||||||||    
T  7857099 tcatttatgtataagtattttgtggacctcaaactttgagtcatttatga 7857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 17543816 - 17543766
Alignment:
Q  5 ttcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatc 55  Q
    |||||||||||||||||||||||||||  ||||| ||| ||| ||||||||    
T  17543816 ttcactttcaacgactcaaatccatagtagaatcttaaaataagcaaaatc 17543766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18491117 - 18491079
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcc 39  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  18491117 tttattcaccttcaacgactcaaatccatagcagaatcc 18491079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 28669544 - 28669594
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatt 321  Q
    ||||||||||||||| ||||||||| |||||||||  |||| |||||||||    
T  28669544 atcgattctacaaaaatagttaagtaaaatccttcattttttattgcgatt 28669594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 31108422 - 31108504
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgaca 379  Q
    ||||| || ||||||||||||| |||||||| | ||||||||||| || |||||| |  ||||| ||| || |||||||||||    
T  31108422 aaatcttttgattttgattgcggttttacgaatctcgattttgctattccctttcgacctgaagtaaagtcctgattttgaca 31108504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 381
Target Start/End: Original strand, 1179068 - 1179177
Alignment:
Q  274 gattctacaaaattagttaagtcaaatccttc-gattttgattgcgattttacgattgtcgattttgctctt-tcctttcaatttgaagcaaaatcttga 371  Q
    |||||||||||| ||||| ||| ||||||||| |||||||||||||| |||| |||| | ||  ||||  ||  ||||||||  ||||||||||||  ||    
T  1179068 gattctacaaaagtagttgagtaaaatccttcagattttgattgcgactttaggatttttgaaattgccattcacctttcaacctgaagcaaaatcccga 1179167  T
Q  372 ttttgacaac 381  Q
    ||||||||||    
T  1179168 ttttgacaac 1179177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 7918247 - 7918182
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||| ||||| |||||||||||| |  || ||| |||| |||||||||||||||| |||||||||    
T  7918247 atttcctatattgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacga 7918182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18491041 - 18491000
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaa 42  Q
    ||||||||| ||||| |||||||||||||||| |||||||||    
T  18491041 tttattcaccttcaatgactcaaatccatagcagaatcctaa 18491000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 23506092 - 23506153
Alignment:
Q  280 acaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    |||||| ||||| | | ||||||||||||||| |||| |||||||| ||| |||||||||||    
T  23506092 acaaaaatagttgactaaaatccttcgattttaattgtgattttacaattttcgattttgct 23506153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 28669422 - 28669455
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaac 184  Q
    |||||||||||||||||||||||||| |||||||    
T  28669422 tcatttatgtataagtattttgtggaatttaaac 28669455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 31108351 - 31108388
Alignment:
Q  304 tcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  31108351 tcgattttgattgcgattttacgatttacgattttgct 31108388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 7223611 - 7223643
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  7223611 aaatccatcgattttgattgcgattttacgatt 7223643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 23897910 - 23897942
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  23897910 aaatccatcgattttgattgcgattttacgatt 23897942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 24209544 - 24209480
Alignment:
Q  319 attttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    |||||| |||| |||||| |||| || |||||| ||  ||||||||||||| |||||||||||||    
T  24209544 attttatgattttcgattctgctattccctttcgatcggaagcaaaatcttaattttgacaacct 24209480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 381
Target Start/End: Complemental strand, 27614518 - 27614434
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaac 381  Q
    |||||||||||||||||||| |||||||||| |  ||||||| || || |||||| |  ||||| ||| || | |||||||||||    
T  27614518 aaatccttcgattttgattgtgattttacgagtcccgattttactattccctttcgacctgaagtaaattcctaattttgacaac 27614434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 377
Target Start/End: Complemental strand, 8981 - 8741
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    |||||||  |||||||||| ||||||  |||||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||||||||| ||| ||    
T  8981 tcatttacatataagtattgtgtggaaattaaactgagtcatttatgactatatacaacttataacatatatttagcattatctttgttttggtaaaatc 8882  T
Q  251 catcgattttgat--------------ttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgatt 336  Q
    |||||||||||||              |||||||||| ||||||||||| ||||| ||| ||||||||||||||||||| |||||||| |||| ||||||    
T  8881 catcgattttgattgcgattttacaagttcttatatctattctacaaaagtagttgagtaaaatccttcgattttgattacgattttatgattttcgatt 8782  T
Q  337 ttgctctttcctttcaatttgaagcaaaatcttgattttga 377  Q
    |||||||  | ||||||  | ||||||||||  ||||||||    
T  8781 ttgctctaccttttcaacctaaagcaaaatcccgattttga 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9100 - 9049
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaa 52  Q
    ||||||||| ||||||||||||||||||||||  |||||| | |||||||||    
T  9100 tttattcaccttcaacgactcaaatccatagcaaaatccttaaataggcaaa 9049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 94 - 327
Target Start/End: Complemental strand, 17055997 - 17055751
Alignment:
Q  94 ttcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaa-tcatttatgtataagtattttgtggactttaaactgagtcat 192  Q
    |||||||||||| ||| ||||||||| |||||| ||| |||||||| |        | ||||||||||||||||||||||||||||||||| ||||||||    
T  17055997 ttcatacaaaatcgcaagattttaaagggttttgaagaattttgtcgatttttgttagtcatttatgtataagtattttgtggactttaaattgagtcat 17055898  T
Q  193 ttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------atttcttatatcgattc 278  Q
     ||||| |||||| |||||||| |  ||||||||||||| ||||||||||| ||| |||||| ||||||              ||||||| |||||||||    
T  17055897 atatgactatatataatttatagc--atatttagcattatttttgttttggtaaaatccatccattttgattgcaattttacaatttcttgtatcgattc 17055800  T
Q  279 tacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  17055799 tacaaaagtagttgagtaaaatccttcgattttgattgcgattttacga 17055751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 264
Target Start/End: Complemental strand, 18891697 - 18891503
Alignment:
Q  72 aaaatcgca-caaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatc-atttatgtataagtatt 169  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||| |||||| |||  | |||||||        | | |||||||||||||||||    
T  18891697 aaaatcgcatcaaaatcgtgaaattcatacgaaattgcacgattttaaagggttttgaagtctattgtccattttttttagccatttatgtataagtatt 18891598  T
Q  170 ttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    ||||||| |||||||||| |||||||||| ||| || ||||||||| ||||||||| ||||| ||| ||||||| ||| | |||| |||||||||    
T  18891597 ttgtggaatttaaactgaatcatttatgactatctataatttataatatatatttaacattattttcgttttggtaaaattcatcaattttgatt 18891503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 382
Target Start/End: Original strand, 47785996 - 47786209
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgatttt--------------gattt 265  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||| |||| ||||  | ||| ||| ||||||||||||              |||||    
T  47785996 taaactaagtcatttatgactatataccatttataacatatatttagtattattttt--tgtggtaaaatccatcgatttttatttcgattttgtgattt 47786093  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
    |||||||| ||||||||||| ||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||||||  |||||||  | ||| ||||    
T  47786094 cttatatcaattctacaaaagtagttgagtaaaatccttcgattttggttgtgattttacgattgtcgattttgctcttctctttcaacctaaag-aaaa 47786192  T
Q  366 tcttgattttgacaacc 382  Q
    ||  |||||||||||||    
T  47786193 tcccgattttgacaacc 47786209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 262 - 382
Target Start/End: Original strand, 32881552 - 32881672
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||||||||||||||||||||||  ||||| ||| ||||||||||||||   |||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  32881552 atttcttatatcgattctacaaacgtagttgagtaaaatccttcgatttcagttgcgattttacgattgtcgattttgcttttctctttcaatctgaagc 32881651  T
Q  362 aaaatcttgattttgacaacc 382  Q
    ||||||  |||||||| ||||    
T  32881652 aaaatcccgattttgaaaacc 32881672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 81 - 264
Target Start/End: Complemental strand, 27917462 - 27917281
Alignment:
Q  81 caaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaa-tcatttatgtataagtattttgtggactt 179  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||  ||||| || | ||        | |||||||||||||||||||||||| ||||    
T  27917462 caaaattgtgaaattcatacaaaattggaggattttaaagggttttggaggatgttttacattttgtttagtcatttatgtataagtattttgtg-actt 27917364  T
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||| |||||||| ||||||| |||||||| |||||||| |||||| || |||||  | ||| | ||||||||||||||    
T  27917363 taaactgagttatttatgactatatacgatttataatatatattttgcattatttatgttt--gtaaaattcatcgattttgatt 27917281  T

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Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 41032670 - 41032549
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||||||||||||||||||||||| ||||| ||| |||| ||||||||||  |||||||||||||||| || |||||||||||  |||||||  |||||     
T  41032670 atttcttatatcgattctacaaaactagttgagtaaaattcttcgattttagttgcgattttacgattatcaattttgctcttctctttcaacctgaagt 41032571  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||||||   |||||||||||||    
T  41032570 aaaatccctattttgacaacct 41032549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 383
Target Start/End: Complemental strand, 25146659 - 25146544
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatc 367  Q
    |||||||||||||| |||    || ||| |||||||||||||||||||||||||||||||||  |||||||||| || ||||||||  ||||| ||| ||    
T  25146659 tatatcgattctacgaaagaccttgagtaaaatccttcgattttgattgcgattttacgatttccgattttgctattccctttcaacctgaagtaaagtc 25146560  T
Q  368 ttgattttgacaacct 383  Q
     |||||||||||||||    
T  25146559 ctgattttgacaacct 25146544  T

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Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 12002890 - 12002801
Alignment:
Q  156 tatgtataagtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatatatttagcattacttttgttttgg 243  Q
    |||||||| |||||||||||||||| || |   |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  12002890 tatgtatatgtattttgtggactttgaattttaagtcatttatgactatatgcaatttataacatatatttagcattatttttgttttgg 12002801  T

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Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 383
Target Start/End: Original strand, 30619181 - 30619293
Alignment:
Q  269 atatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatct 368  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||  |||||| ||||||||||||||||||||||||  ||||| |  ||||| ||||||     
T  30619181 atatcgattctacaaaagtagttgagtaaaatccttcgatttttgttgcga-tttacgattgtcgattttgctcttctctttcgacctgaag-aaaatcc 30619278  T
Q  369 tgattttgacaacct 383  Q
     ||||||||||||||    
T  30619279 cgattttgacaacct 30619293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 21846171 - 21846050
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||||||||||||||||||||||| |  || ||| |||||||||||||||||||||||||||| || |  |||||||||| || |||||| |  || ||     
T  21846171 atttcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttaagagtcccgattttgctattccctttcgacctggagt 21846072  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||| || |||||||||||||||    
T  21846071 aaagtcctgattttgacaacct 21846050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 350
Target Start/End: Original strand, 16434733 - 16434829
Alignment:
Q  254 cgattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttccttt 350  Q
    |||||||| | ||||||||| ||||||||||| | ||  ||| ||||||||||||||||||||| ||||||||||| ||||||||||| || |||||    
T  16434733 cgattttgttatcttatatcaattctacaaaagttgtcgagtaaaatccttcgattttgattgcaattttacgattttcgattttgctattcccttt 16434829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 383
Target Start/End: Original strand, 13100421 - 13100543
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    ||||||||||||||||||||||||  |  || ||| |||||||| |||||||||||||||||||||| |  |||||||||  || |||||| | ||||||    
T  13100421 gatttcttatatcgattctacaaatgtccttgagtaaaatcctttgattttgattgcgattttacgagttccgattttgccattccctttcgacttgaag 13100520  T
Q  361 caaaatcttgattttgacaacct 383  Q
     ||| ||  ||||||||||||||    
T  13100521 taaagtcccgattttgacaacct 13100543  T

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Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 16125447 - 16125287
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt--------------t 265  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||| |||| | || ||| || || |||||||||||||||||              |    
T  16125447 taaactaagtcatttatgaatatataccatttataacatatatttagtattattatt-tttgggtaacgtccatcgattttgattgcgattttacaattt 16125349  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    |||||||||||||||||||  |  || ||| |||||||||||||||||||||||||||||||    
T  16125348 cttatatcgattctacaaatgtccttgagtaaaatccttcgattttgattgcgattttacga 16125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 17197562 - 17197450
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    |||||||||||| |||||||  ||||||| ||||  |||||||||||| ||||| |||||| ||||||||||||| ||||| ||||||||||| | | ||    
T  17197562 catttatgtatatgtattttacggactttgaactttagtcatttatgactatatgcaatttgtaacatatatttaacattatttttgttttggtagaatc 17197463  T
Q  251 catcgattttgatt 264  Q
    | ||||||||||||    
T  17197462 c-tcgattttgatt 17197450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 24117602 - 24117695
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaa--ctgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggc 244  Q
    ||||||||||||| |||||||||| ||||||||   |||||||||||||| ||||| ||||||| |||  ||||||||||||| ||||||||||||    
T  24117602 tcatttatgtatatgtattttgtgaactttaaattttgagtcatttatgactatatgcaatttaaaac--atatttagcattatttttgttttggc 24117695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 42180057 - 42179973
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| |||||||||||| ||||||| ||||||||||||||| ||| ||||  ||| |||||| ||| ||||||||||||||||    
T  42180057 taaactaagtcatttatgactatataccatttataacatatatatagtattatattttttttggtaaaatccatcgattttgatt 42179973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 383
Target Start/End: Original strand, 12513518 - 12513624
Alignment:
Q  277 tctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttg 376  Q
    |||||| || ||||| ||| |||||||| ||||||| |||||||||||| ||||||||||||||||||  ||||  |  ||||||||||||   ||||||    
T  12513518 tctacagaagtagttgagtaaaatcctttgattttggttgcgattttacaattgtcgattttgctcttctcttttgacctgaagcaaaatcccaattttg 12513617  T
Q  377 acaacct 383  Q
    |||||||    
T  12513618 acaacct 12513624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 16446762 - 16446700
Alignment:
Q  169 tttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcatta 231  Q
    ||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  16446762 tttgtgggcttgaaactgagtcatatatgattatatgcaatttataacatatatttagtatta 16446700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 14074380 - 14074259
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    ||||| |||||||||||||||||| |  || ||| |||||||||||||||||||| ||||||| || |  | |||||||| || |||||| |  |||||     
T  14074380 atttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttatgagttccaattttgctattccctttcgacctgaagt 14074281  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||| || |||||||||||||||    
T  14074280 aaagtcctgattttgacaacct 14074259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 18337300 - 18337239
Alignment:
Q  158 tgtataagtattttgtggactttaaact-gagtcatttatgattatatacaatttataacat 218  Q
    ||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  18337300 tgtatgagtattttgtggattttaaacttgagtcatttatgactatatacaatttataacat 18337239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18337602 - 18337525
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcg 78  Q
    ||||||||| |||||||||||||||||||||| ||| || || |||||||||||||| ||||||   |||||||||||    
T  18337602 tttattcaccttcaacgactcaaatccatagcagaaccccaaaataggcaaaatcctagtaaaatcgcatcaaaatcg 18337525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 23528888 - 23528953
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||| |||||||||||||||||| |  || ||| |||||||||||||||||||||||||||||||    
T  23528888 atttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 23528953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 18304708 - 18304641
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgatt 329  Q
    ||||| |||||||||||||||||| |  || ||| ||||||||||||||||| |||||||||||||||    
T  18304708 atttcctatatcgattctacaaaagtcctttagtaaaatccttcgattttgaatgcgattttacgatt 18304641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 383
Target Start/End: Complemental strand, 9352055 - 9351839
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------attt 265  Q
    |||||| |||||||| ||| ||||||| ||||||||||||||||||| |||| |||| ||| || ||| | |||||||||||              ||||    
T  9352055 taaactaagtcatttttgactatataccatttataacatatatttagtattaatttt-tttgggtaaaattcatcgattttgattgtgattttacaattt 9351957  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
    | ||||| |||||||||||| |  ||   | ||||||| ||||||||||||||||||||||| |  |||||||||| ||  ||||| |  ||||| |||     
T  9351956 cctatatagattctacaaaagtccttggataaaatcctacgattttgattgcgattttacgagtcccgattttgctattcgctttcgacctgaagtaaag 9351857  T
Q  366 tcttgattttgacaacct 383  Q
    ||||||||||||||||||    
T  9351856 tcttgattttgacaacct 9351839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 360
Target Start/End: Complemental strand, 19009845 - 19009747
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    ||||| |||||||||| ||||||| |  || ||| |||||||| |||||||||||||||||||||| |  |||||||||| || |||||| || |||||    
T  19009845 atttcctatatcgattttacaaaagttcttgagtaaaatcctttgattttgattgcgattttacgagtcccgattttgctattccctttcgatctgaag 19009747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 13276251 - 13276175
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||| ||||||  ||||||||||||||||||| |||| || | |||||| | ||||||||||||||||||    
T  13276251 agtcatttatgactatatatcatttataacatatatttagtatta-ttattttttggtatagtccatcgattttgatt 13276175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 21242921 - 21242857
Alignment:
Q  265 tcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgatt 329  Q
    ||||||||||||||||||||||||||| ||| |||| |||| ||| | ||| |||||||||||||    
T  21242921 tcttatatcgattctacaaaattagttgagtaaaattcttcaattgtaattacgattttacgatt 21242857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 25146761 - 25146678
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| ||| |||||||| ||||||||||||||||| ||||||||| || | |||| ||| || ||| ||||||||||||||||    
T  25146761 taaactaagttatttatgactatatacaatttataacgtatatttagtatcaatttt-tttgggtaaaatccatcgattttgatt 25146678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 9954895 - 9954841
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    ||||||||||||||||||||||||||||||| |  |||||||||| || ||||||    
T  9954895 aaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttc 9954841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 13276163 - 13276112
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgatt 315  Q
    ||||||||||||||||||||||||||  ||||||  ||||||||||||||||||    
T  13276163 atttcttatatcgattctacaaaattccttaagt--aatccttcgattttgatt 13276112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 383
Target Start/End: Complemental strand, 42179933 - 42179847
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    ||||||||||||||||||||||||||||||| | |||||| |||| || ||||| ||   |||| ||| |  |||||||||||||||    
T  42179933 aaatccttcgattttgattgcgattttacgagtttcgattatgctattcccttttaacccgaagtaaatttctgattttgacaacct 42179847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 18304796 - 18304720
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||| ||||||| ||| ||||| ||||||||| |||| |||| |||||  ||| ||||||||||||||||    
T  18304796 agtcatttatgactatataccattcataacgtatatttagtattaatttt-ttttgataaaatccatcgattttgatt 18304720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 9321597 - 9321553
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||    
T  9321597 aaatccttcgattttgattgcgattttacgagttccgattttgct 9321553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 13100244 - 13100292
Alignment:
Q  5 ttcactttcaacgactcaaatccatagccgaatcctaacataggcaaaa 53  Q
    ||||| |||||||||||||||||||||  ||||||||| ||||||||||    
T  13100244 ttcacgttcaacgactcaaatccatagtagaatcctaaaataggcaaaa 13100292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 23528715 - 23528759
Alignment:
Q  11 ttcaacgactcaaatccatagccgaatcctaacataggcaaaatc 55  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||    
T  23528715 ttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 23528759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 8773506 - 8773565
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    |||||| ||||||||||| |  |||||| ||||||||| ||||| |||||||||||||||    
T  8773506 tatatcaattctacaaaaatccttaagtaaaatccttcaattttaattgcgattttacga 8773565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 39845146 - 39845055
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaa 359  Q
    |||||||| | ||||||| ||||| ||| ||||| ||| ||||| ||||| ||||||| ||| ||||||||||| ||  ||||| |||||||    
T  39845146 tatatcgactttacaaaaatagttgagtaaaatcattcaattttaattgcaattttacaattttcgattttgctattctctttcgatttgaa 39845055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 41032746 - 41032695
Alignment:
Q  5 ttcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatcc 56  Q
    ||||| |||||||||||||||||||||  |||| |||| |||||||||||||    
T  41032746 ttcaccttcaacgactcaaatccatagtagaattctaaaataggcaaaatcc 41032695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 350
Target Start/End: Complemental strand, 9128729 - 9128647
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttccttt 350  Q
    ||||||||| |||||||| |  || ||| |||||||||||||||||| | |||||||||| |  |||||||||| || |||||    
T  9128729 tatatcgatcctacaaaaatcctttagtaaaatccttcgattttgatcgtgattttacgagtcccgattttgctattcccttt 9128647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 329
Target Start/End: Complemental strand, 17056035 - 17055997
Alignment:
Q  291 taagtcaaatccttcgattttgattgcgattttacgatt 329  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  17056035 taagtaaaatccatcgattttgattgcgattttacgatt 17055997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 185
Target Start/End: Complemental strand, 39845252 - 39845218
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact 185  Q
    |||||||| ||||||||||||||||||||||||||    
T  39845252 tcatttatttataagtattttgtggactttaaact 39845218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 8773066 - 8773138
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatata 221  Q
    |||||||||||||  ||||||| ||||||| ||||   |||||||||||| | ||| ||||||||||||||||    
T  8773066 tcatttatgtatatttattttgcggactttgaactttaagtcatttatgactctatgcaatttataacatata 8773138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 9955019 - 9954942
Alignment:
Q  188 gtcatttatgattatatacaatttataacatatatttagcattacttttgttttg-gcaaagtccatcgattttgatt 264  Q
    ||||||||||| ||||||| |||||||||||||||| || |||| | || ||||| | ||| ||||||||| ||||||    
T  9955019 gtcatttatgactatataccatttataacatatattcagtattattatttttttgtgtaaaatccatcgatcttgatt 9954942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 16434674 - 16434731
Alignment:
Q  208 atttataacatatatttagcatt-acttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||||||||| |||| | ||||||||||| | | ||||||||||||||||    
T  16434674 atttataacatatatttatcattaatttttgttttggtagaatccatcgattttgatt 16434731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 17869612 - 17869559
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgctctttccttt 350  Q
    |||||||| |||||||||||||||||||||  |  ||||||||||||| |||||    
T  17869612 aaatcctttgattttgattgcgattttacgtgtcccgattttgctcttcccttt 17869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 9327245 - 9327213
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  9327245 aaatccatcgattttgattgcgattttacgatt 9327213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 9955065 - 9955033
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  9955065 aaatccatcgattttgattgcgattttacgatt 9955033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 12513380 - 12513412
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  12513380 aaatccatcgattttgattgcgattttacgatt 12513412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 382
Target Start/End: Complemental strand, 17197414 - 17197306
Alignment:
Q  274 gattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgatt 373  Q
    |||||||||||| |  || ||| |||||||||||||||  |||||||||||||| |  ||||||||||  | |||||| | |||||| ||| ||  ||||    
T  17197414 gattctacaaaagtccttgagtaaaatccttcgattttagttgcgattttacgagttccgattttgctactccctttcgacttgaagtaaagtcccgatt 17197315  T
Q  374 ttgacaacc 382  Q
    |||| ||||    
T  17197314 ttgataacc 17197306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 18337532 - 18337472
Alignment:
Q  81 caaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtcca 141  Q
    |||||||||||||| |||||||||| | ||||||||||| ||| || | | ||||||||||    
T  18337532 caaaatcgtgaaatccatacaaaatcgtaggattttaaagggtcttgatgaattttgtcca 18337472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 19009976 - 19009944
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  19009976 aaatccatcgattttgattgcgattttacgatt 19009944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 21846258 - 21846210
Alignment:
Q  188 gtcatttatgattatatacaatttataacatatatttagcattactttt 236  Q
    ||||||||| | |||||| |||||||||||||||||||| |||| ||||    
T  21846258 gtcatttataactatatataatttataacatatatttagtattaatttt 21846210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 26575147 - 26575032
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaag 248  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||||| | |     
T  26575147 tcatttatgtataagtattttgtggactttaaactttgagtcatttatgattatattcaatttaaaacatatttttagcatcaattttgttttggtagaa 26575048  T
Q  249 tccatcgattttgatt 264  Q
    ||||||||||||||||    
T  26575047 tccatcgattttgatt 26575032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 367
Target Start/End: Complemental strand, 15761375 - 15761150
Alignment:
Q  158 tgtataagtattttgtggactttaaactgagtcatttatgatt--atatacaatttataacatatatttagcattacttttgttttggcaaagtccatcg 255  Q
    ||||||| ||||||||| | |||||||| | |||||||||| |  ||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  15761375 tgtataactattttgtgaattttaaacttactcatttatgactctatatacaatttataacatatatttagcattatttttgttttggtaaaatccatcg 15761276  T
Q  256 attttgat--------------ttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||              |||||||||||||||||||||| || || ||| ||||||||||||||  ||||||||||||||||| || ||||   |    
T  15761275 attttgattgcgattttactacttcttatatcgattctacaaaagtaattgagtaaaatccttcgatttatattgcgattttacgattctcaatttcatt 15761176  T
Q  342 ctttcctttcaatttgaagcaaaatc 367  Q
    ||| ||||||   |||||||||||||    
T  15761175 cttccctttcggcttgaagcaaaatc 15761150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 261 - 383
Target Start/End: Complemental strand, 29384210 - 29384088
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaag 360  Q
    ||||||||||||  ||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| |  |||||    
T  29384210 gatttcttatattaattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattgtcgatttttctcttttctttcgacctgaag 29384111  T
Q  361 caaaatcttgattttgacaacct 383  Q
    |||||||  ||||||||||||||    
T  29384110 caaaatcccgattttgacaacct 29384088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 17647229 - 17647350
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| |  ||||| |  ||||||    
T  17647229 atttcttatatcgattctacaaaactagttgagtaaaatccttcgattttgattgcgattttatgattgtcgattttgctcatctctttcgacctgaagc 17647328  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||||||  |||||| |||||||    
T  17647329 aaaatcccgattttaacaacct 17647350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 180 - 383
Target Start/End: Original strand, 6810958 - 6811172
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt-------------tc 266  Q
    |||||| |||||||||| | ||||||  ||||||||||||||||||| |||| ||||  ||||| ||| ||||||||||||||||             ||    
T  6810958 taaactaagtcatttataactatatatcatttataacatatatttagtattattttt--tttggtaaaatccatcgattttgattgcgattttcaatttc 6811055  T
Q  267 ttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaat 366  Q
    ||||||| ||||||||||| ||||| | | |||| ||||||||||| |||||||||||||||||||||||||||||||  ||||| ||||||| |||| |    
T  6811056 ttatatctattctacaaaagtagttgattaaaattcttcgattttggttgcgattttacgattgtcgattttgctcttctctttcgatttgaaacaaagt 6811155  T
Q  367 cttgattttgacaacct 383  Q
       ||||||||||||||    
T  6811156 tccgattttgacaacct 6811172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 15231853 - 15231974
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||| ||||||||||||||||||| ||||| ||| ||||| | |||||||  |||||||||||||||||||||||||||||||  ||||| | |||||||    
T  15231853 attttttatatcgattctacaaaagtagttgagtaaaatcgtacgattttagttgcgattttacgattgtcgattttgctcttctctttcgacttgaagc 15231952  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||||||| || ||| |||||||    
T  15231953 aaaatctcgaatttaacaacct 15231974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 264
Target Start/End: Complemental strand, 1018199 - 1018090
Alignment:
Q  155 ttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatc 254  Q
    ||||||||||||||||||| ||||||||| || ||||||||||| |||||| ||||||||||||| ||||| ||||| |||| |||||| | | || |||    
T  1018199 ttatgtataagtattttgttgactttaaagtgggtcatttatgactatatataatttataacatacatttaacattatttttattttggtagaatctatc 1018100  T
Q  255 gattttgatt 264  Q
    ||||||||||    
T  1018099 gattttgatt 1018090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 375
Target Start/End: Original strand, 17566217 - 17566443
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattactttt-gttttggcaaagt 249  Q
    |||||||| ||| ||||||||||| |||||||||| || |||| |||| |||||||||||||||       |||||||||  |||| ||||||| ||| |    
T  17566217 tcatttatctatgagtattttgtgaactttaaactaagccattaatgactatatacaatttata-------tttagcatttttttttgttttggtaaaat 17566309  T
Q  250 ccat------cgattttg--atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||      |||||||   ||||||||||||  |||||||||| ||||| ||| |||| |||||||||||||||| ||||||||||| || ||||||||    
T  17566310 ccattgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgct 17566409  T
Q  342 ctttcctttcaatttgaagcaaaatcttgatttt 375  Q
    ||| |||||  |  |||||||||||| |||||||    
T  17566410 cttcccttttgacctgaagcaaaatcctgatttt 17566443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 187 - 351
Target Start/End: Original strand, 45403173 - 45403350
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt-------------tcttatatc 273  Q
    ||||||||||||| |||||| ||||||||||||||||||  |||| | || |||||| ||| || |||||||||||||             || ||||||    
T  45403173 agtcatttatgataatataccatttataacatatatttaatattattatttttttggtaaaatctatcgattttgattgcgttttacaatttcctatatc 45403272  T
Q  274 gattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    |||||||||||| |  |||||| ||||||||||||||||||||||||||||||| | ||||||||||| || ||||||    
T  45403273 gattctacaaaagtctttaagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctattccctttc 45403350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 22910101 - 22910018
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctt 344  Q
    ||||||||||||||||||||||||| ||||| | | ||||||||| |||| | ||||||||||||||||||||||||| |||||    
T  22910101 gatttcttatatcgattctacaaaaatagttgaataaaatccttcaatttcggttgcgattttacgattgtcgatttttctctt 22910018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 381
Target Start/End: Complemental strand, 24056467 - 24056348
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||| |||||| |||||||||||| ||||| ||| ||||||||||||||||||| | |||||| |||  || ||||||||||| |||||| |  ||||||    
T  24056467 atttgttatattgattctacaaaactagttgagtaaaatccttcgattttgattaccattttatgatattcaattttgctcttccctttcgacctgaagc 24056368  T
Q  362 aaaatcttgattttgacaac 381  Q
    ||||||| | ||||||||||    
T  24056367 aaaatctcggttttgacaac 24056348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 187 - 383
Target Start/End: Original strand, 23142319 - 23142527
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------atttcttatat 272  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||  ||  |||||| |||||||||||||||||              |||||||||||    
T  23142319 agtcatttatgactatataccatttataacatatatttagtatta--ttatttttggtaaagtccatcgattttgattgcgattttacaatttcttatat 23142416  T
Q  273 cgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgat 372  Q
    ||||||||||||| |  || | | ||||| ||||||||  |||||||||||||||||  || ||||||| || |||||| | |||||  ||| || ||||    
T  23142417 cgattctacaaaagtttttgactaaaatcattcgatttaaattgcgattttacgattaccggttttgctattccctttcgaattgaaataaagtcctgat 23142516  T
Q  373 tttgacaacct 383  Q
    |||||||||||    
T  23142517 tttgacaacct 23142527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 383
Target Start/End: Complemental strand, 7489174 - 7489059
Alignment:
Q  268 tatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatc 367  Q
    |||||||||||||||||| |  || ||| ||||||| ||||||||||||||||||||||| |    |||||||| ||||||||| | |||||| ||| ||    
T  7489174 tatatcgattctacaaaagtccttgagtaaaatcctccgattttgattgcgattttacgagtcctaattttgctatttcctttcgacttgaagtaaagtc 7489075  T
Q  368 ttgattttgacaacct 383  Q
     |||||||||||||||    
T  7489074 ctgattttgacaacct 7489059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 31424399 - 31424517
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagc 361  Q
    |||||||||||| |||| |||| | ||||| ||| |||||||    ||||||||||||||||||||||||||||||||||| |  ||||| |  |||||     
T  31424399 atttcttatatcaattccacaagagtagttgagtaaaatcctg---ttttgattgcgattttacgattgtcgattttgctcatctctttcgacctgaagt 31424495  T
Q  362 aaaatcttgattttgacaacct 383  Q
    ||||||| ||||||||||||||    
T  31424496 aaaatctcgattttgacaacct 31424517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 8582153 - 8582263
Alignment:
Q  153 atttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtcca 252  Q
    |||||||||||| ||||||||||||||||||  | || |||||| | ||  |||||| ||||||||||||||| ||||| || |||||||| ||| | ||    
T  8582153 atttatgtataaatattttgtggactttaaatcg-gtaatttataactaattacaatgtataacatatatttaacattatttatgttttggtaaaattca 8582251  T
Q  253 tcgattttgatt 264  Q
    ||||||||||||    
T  8582252 tcgattttgatt 8582263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 383
Target Start/End: Original strand, 11879737 - 11879953
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttga--------------ttt 265  Q
    |||||| ||| |||||||| ||||||| ||||||||||||||||||| |||| | || |||||| ||| ||||||||||||||              |||    
T  11879737 taaactaagtaatttatgactatataccatttataacatatatttagtattattatt-ttttggtaaaatccatcgattttgaatgcgattttacaattt 11879835  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
      ||||||||||||| |||| |  ||| || ||||||||||||||||||||||||||||||| |  ||||||| || || |||||  |  ||||| ||||    
T  11879836 tctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacctgaagtaaaa 11879935  T
Q  366 tcttgattttgacaacct 383  Q
    ||  ||||||||||||||    
T  11879936 tcccgattttgacaacct 11879953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 383
Target Start/End: Original strand, 11897153 - 11897369
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttga--------------ttt 265  Q
    |||||| ||| |||||||| ||||||| ||||||||||||||||||| |||| | || |||||| ||| ||||||||||||||              |||    
T  11897153 taaactaagtaatttatgactatataccatttataacatatatttagtattattatt-ttttggtaaaatccatcgattttgaatgcgattttacaattt 11897251  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaa 365  Q
      ||||||||||||| |||| |  ||| || ||||||||||||||||||||||||||||||| |  ||||||| || || |||||  |  ||||| ||||    
T  11897252 tctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacctgaagtaaaa 11897351  T
Q  366 tcttgattttgacaacct 383  Q
    ||  ||||||||||||||    
T  11897352 tcccgattttgacaacct 11897369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 40541856 - 40541770
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattactttt 236  Q
    ||||||||||||| |||||||||| || || ||||  |||||||||||| ||||| |||||||||||||||||||| ||||| ||||    
T  40541856 tcatttatgtatacgtattttgtgtaccttgaactttagtcatttatgactatatgcaatttataacatatatttaacattattttt 40541770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 16752119 - 16752208
Alignment:
Q  153 atttatgtataagtattttgtggactttaaactg-agtcatttatgattatatacaatttataacatatatttagcattacttttgtttt 241  Q
    ||||||||||| ||||||| || ||||| ||||  | |||||||||| ||||| |||||||||||||||||||| ||||| |||||||||    
T  16752119 atttatgtatatgtattttatgaactttgaactttactcatttatgactatatgcaatttataacatatatttaacattatttttgtttt 16752208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 24414184 - 24414119
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||| |||||||||||||||||| |  || ||| |||||||||||||||||||||||||||||||    
T  24414184 atttcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacga 24414119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 382
Target Start/End: Complemental strand, 11974022 - 11973942
Alignment:
Q  302 cttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacc 382  Q
    |||| |||| ||||||||||||| |||| ||||||||||| ||  |||||||| ||| |||||||| ||||||||||||||    
T  11974022 cttcaatttcgattgcgattttatgattttcgattttgctattctctttcaatctgatgcaaaatcctgattttgacaacc 11973942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 15294900 - 15294963
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttta 324  Q
    |||||||||||| |||||||||||| |  || ||| ||||||||||||||||||||||||||||    
T  15294900 gatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgatttta 15294963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 15475269 - 15475332
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttta 324  Q
    |||||||||||| |||||||||||| |  || ||| ||||||||||||||||||||||||||||    
T  15475269 gatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgatttta 15475332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 24056578 - 24056523
Alignment:
Q  81 caaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggatttt 136  Q
    ||||||||||||||||||||||||||||||||||||| | |||||  |||||||||    
T  24056578 caaaatcgtgaaattcatacaaaattgcaggattttataaggtttcgaaggatttt 24056523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 384
Target Start/End: Complemental strand, 3094125 - 3094019
Alignment:
Q  278 ctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttga 377  Q
    |||||||| || || ||| ||||||||| |||||  ||||  ||||||||||||||||||||||||   ||||| |  | ||| ||||||||||||||||    
T  3094125 ctacaaaagtaattgagtaaaatccttcaatttttgttgcagttttacgattgtcgattttgctctactctttccacctaaagtaaaatcttgattttga 3094026  T
Q  378 caacctc 384  Q
    |||||||    
T  3094025 caacctc 3094019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 3094235 - 3094151
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||||| |||  |||| |||| | ||| || ||| |||||||||    
T  3094235 taaactaagtcatttatgactatataccatttataacatatatttagtattttttttttttttgtaaaatctatcaattttgatt 3094151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 3094329 - 3094278
Alignment:
Q  5 ttcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatcc 56  Q
    ||||| |||||||||||||||||||||  ||||||||| |||||||||||||    
T  3094329 ttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaatcc 3094278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 5922280 - 5922339
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatt 321  Q
    ||||| |||||||||||||||||| |  || ||| |||||||||||||||||||||||||    
T  5922280 atttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatt 5922339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 2040360 - 2040430
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||| |   | ||| ||||||||||||||||||||||||||||||| |  ||||||||||    
T  2040360 atcgattctacaaaagtccatgagtaaaatccttcgattttgattgcgattttacgagttccgattttgct 2040430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 29384300 - 29384221
Alignment:
Q  189 tcatttatgattatatacaatttataacatatatttagcatta----cttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||     |||| |||||| ||| ||||||||||||||||    
T  29384300 tcatttatgactatataccatttataacatatatttagtattagtatttttttttttggtaaaatccatcgattttgatt 29384221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 383
Target Start/End: Complemental strand, 40541714 - 40541596
Alignment:
Q  265 tcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaa 364  Q
    |||||||||||||||||| || |  || | | ||||| ||| ||||||||||||||||||||| |  ||||||||||  |||||||| | |||||| |||    
T  40541714 tcttatatcgattctacagaagtccttgaataaaatctttcaattttgattgcgattttacgagtcccgattttgctacttcctttcgacttgaagtaaa 40541615  T
Q  365 atcttgattttgacaacct 383  Q
     ||  |||||||| |||||    
T  40541614 gtcccgattttgataacct 40541596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 16752251 - 16752320
Alignment:
Q  258 tttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    |||| |||| || ||| |||||||||||||  || ||| |||||||||||||||| ||||||||||||||    
T  16752251 tttgctttcctacatcaattctacaaaattccttgagtaaaatccttcgattttgtttgcgattttacga 16752320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 26575001 - 26574948
Alignment:
Q  275 attctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgat 328  Q
    |||||||| || |||||| || ||||||||| ||||||||||||||||||||||    
T  26575001 attctacataaatagttaggtaaaatccttcaattttgattgcgattttacgat 26574948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 32424566 - 32424631
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||| ||| |||||||||||||| |  || ||| ||||||||||||||| |||||||||||||||    
T  32424566 atttcctatctcgattctacaaaactccttgagtaaaatccttcgattttaattgcgattttacga 32424631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 27836456 - 27836373
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||| |||||||||||| ||||||| ||||||||||| ||||||| |||  |||| |  ||| ||| ||||||||||||||||    
T  27836456 taaactaagtcatttatgactatataccatttataacatgtatttagtatt-tttttttgctggtaaaatccatcgattttgatt 27836373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 31424220 - 31424267
Alignment:
Q  9 ctttcaacgactcaaatccatagccgaatcctaacataggcaaaatcc 56  Q
    |||||||||||||||||||||||  |||||| || |||||||||||||    
T  31424220 ctttcaacgactcaaatccatagaagaatcccaaaataggcaaaatcc 31424267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 367
Target Start/End: Complemental strand, 19704347 - 19704249
Alignment:
Q  269 atatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatc 367  Q
    ||||||||||||||| | |  || ||| || ||||| |||||||||||||||||||||| |  |||||||||| || |||||  | |||||| ||||||    
T  19704347 atatcgattctacaacagtccttgagtaaattcctttgattttgattgcgattttacgagtcccgattttgctattccctttggacttgaagtaaaatc 19704249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 327
Target Start/End: Complemental strand, 27836161 - 27836131
Alignment:
Q  297 aaatccttcgattttgattgcgattttacga 327  Q
    |||||||||||||||||||||||||||||||    
T  27836161 aaatccttcgattttgattgcgattttacga 27836131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 351
Target Start/End: Original strand, 7262006 - 7262083
Alignment:
Q  274 gattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttc 351  Q
    |||||||||||| |  || ||| ||||||||  ||||||||||||||||||||| |  ||||||||||  ||||||||    
T  7262006 gattctacaaaagtccttgagtaaaatcctttaattttgattgcgattttacgagtcccgattttgctacttcctttc 7262083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 11879653 - 11879702
Alignment:
Q  5 ttcactttcaacgactcaaatccatagccgaatcctaacataggcaaaat 54  Q
    |||||||||||||||||||||| ||||  ||||||||| ||||| |||||    
T  11879653 ttcactttcaacgactcaaatctatagtagaatcctaaaataggaaaaat 11879702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 11897069 - 11897118
Alignment:
Q  5 ttcactttcaacgactcaaatccatagccgaatcctaacataggcaaaat 54  Q
    |||||||||||||||||||||| ||||  ||||||||| ||||| |||||    
T  11897069 ttcactttcaacgactcaaatctatagtagaatcctaaaataggaaaaat 11897118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 16751932 - 16752000
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgt 138  Q
    ||||||||||||||||||| |||||| ||| |||||| |||||||||| |  | |||| |||||||||||    
T  16751932 atcaaaatcgcacaaaatc-tgaaatccattcaaaatcgcaggattttgatggattttgaaggattttgt 16752000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 26879778 - 26879863
Alignment:
Q  298 aatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaatttgaagcaaaatcttgattttgacaacct 383  Q
    ||||| || ||||||||||||||||||||||| | |||||||||  | ||||||||  ||||  ||||||  || |||||||||||    
T  26879778 aatccatcaattttgattgcgattttacgatttttgattttgctgatccctttcaacctgaactaaaatcacgactttgacaacct 26879863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 3094283 - 3094251
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  3094283 aaatccatcgattttgattgcgattttacgatt 3094251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 6292271 - 6292227
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    |||||| || ||||| |||||||||| ||||||||||||||||||    
T  6292271 aaatccatcaattttaattgcgatttaacgattgtcgattttgct 6292227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 7489268 - 7489224
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcatta 231  Q
    |||||||||||| ||||||  ||||||||||||||||||| ||||    
T  7489268 agtcatttatgactatatatcatttataacatatatttagtatta 7489224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 15761451 - 15761391
Alignment:
Q  81 caaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgtcca 141  Q
    ||||||| |||||| |||||||| | | | ||||||||| |||||| ||||||||||||||    
T  15761451 caaaatcatgaaatccatacaaagtcgaaagattttaaagggttttgaaggattttgtcca 15761391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 29384239 - 29384207
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  29384239 aaatccatcgattttgattgcgattttacgatt 29384207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 45403128 - 45403160
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  45403128 aaatccatcgattttgattgcgattttacgatt 45403160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 69; Significance: 8e-31; HSPs: 7)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 48868 - 48680
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||| ||||||||||||||||||||   |||||| || | || ||||||  | ||||||   |||||||||||||||||| ||||||||||||||    
T  48868 tttattcaccttcaacgactcaaatccatatgagaatcccaaaaaag-caaaattatagtaaaatcgcatcaaaatcgcacaaaaacgtgaaattcatac 48770  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgtccannnnnnnaatcatttatgtataagtattttgtggactttaaactgagtc 190  Q
    ||||  ||| ||||||||  |||||| ||||||||||| ||       | |||||||||||||| |||||||||||||||||||||||||    
T  48769 aaaaccgcatgattttaatgggttttgaaggattttgttcatttttctagtcatttatgtataattattttgtggactttaaactgagtc 48680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 61463 - 61323
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||| | |||||||  |||||||||||   |||||| || ||| |||||||  | |||||| | |||||||||||||||||| ||||||||||||||    
T  61463 tttattcgccttcaacggttcaaatccatatgagaatcccaaaataagcaaaattatagtaaaattgcatcaaaatcgcacaaaaacgtgaaattcatac 61364  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgtcca 141  Q
    ||||  ||||||||||||  |||||| ||||||||||||||    
T  61363 aaaaccgcaggattttaatgggttttgaaggattttgtcca 61323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 61212 - 61144
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| |||||||||||||||||| ||||||||| |||| ||||||||||||||| ||||||||||||    
T  61212 gatttcatatatcgattctacaaaagtagttaagtaaaattcttcgattttgattgtgattttacgatt 61144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 48557 - 48497
Alignment:
Q  264 ttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgatttta 324  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  48557 ttcttttatcgattctacaaaagtagttaagtaaaatccttcgattttgattgagatttta 48497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 48616 - 48679
Alignment:
Q  156 tatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataaca 217  Q
    ||||||||||| ||||||||||||||||||  |||||  |||||| ||||||||||||||||||    
T  48616 tatgtataagtgttttgtggactttaaactgagagtcggttatgagtatatacaatttataaca 48679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 187
Target Start/End: Original strand, 61268 - 61299
Alignment:
Q  156 tatgtataagtattttgtggactttaaactga 187  Q
    ||||||||||||||||||||||||||||||||    
T  61268 tatgtataagtattttgtggactttaaactga 61299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 48620 - 48572
Alignment:
Q  215 acatatatttagcattacttttgttttggcaaagtccatcgattttgat 263  Q
    ||||||||||| ||||| |||||||| |  |||||||||||||||||||    
T  48620 acatatatttaacattatttttgtttggataaagtccatcgattttgat 48572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 35011 - 34903
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtc 250  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||| || ||| |||||||||||| |||||||| ||||||||| | ||| ||    
T  35011 tcatttatgtataaatattttgtggactttaaactgagccatttatgattatgtataatatataacatatatgtagcattatttttgtttttgtaaaatc 34912  T
Q  251 catcgattt 259  Q
    ||| |||||    
T  34911 cattgattt 34903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 119
Target Start/End: Complemental strand, 35073 - 35039
Alignment:
Q  85 atcgtgaaattcatacaaaattgcaggattttaaa 119  Q
    |||||||||||||||||| ||||||||||||||||    
T  35073 atcgtgaaattcatacaacattgcaggattttaaa 35039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 375
Target Start/End: Original strand, 789 - 1015
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgagtcatttatgattatatacaatttataacatatatttagcattactttt-gttttggcaaagt 249  Q
    |||||||| ||| ||||||||||| |||||||||| || |||| |||| |||||||||||||||       |||||||||  |||| ||||||| ||| |    
T  789 tcatttatctatgagtattttgtgaactttaaactaagccattaatgactatatacaatttata-------tttagcatttttttttgttttggtaaaat 881  T
Q  250 ccat------cgattttg--atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||      |||||||   ||||||||||||  |||||||||| ||||| ||| |||| |||||||||||||||| ||||||||||| || ||||||||    
T  882 ccattgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgct 981  T
Q  342 ctttcctttcaatttgaagcaaaatcttgatttt 375  Q
    ||| |||||  |  |||||||||||| |||||||    
T  982 cttcccttttgacctgaagcaaaatcctgatttt 1015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 37246 - 37110
Alignment:
Q  1 tttattcactttcaacgactcaaatccatagccgaatcctaacataggcaaaatccttgtaaaagtccatcaaaatcgcacaaaatcgtgaaattcatac 100  Q
    ||||||||| |||||| ||||||||||||||| ||||| ||| ||||| |||||||| ||||||   |||||||||| ||||||||||||||||  || |    
T  37246 tttattcaccttcaacaactcaaatccatagcagaatcttaaaataggtaaaatcctagtaaaatcgcatcaaaatcacacaaaatcgtgaaatctatgc 37147  T
Q  101 aaaattgcaggattttaaacggtttttaaggattttgt 138  Q
    |||| |||| ||||||||| |||||| ||||| |||||    
T  37146 aaaa-tgcatgattttaaagggttttgaaggactttgt 37110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 37103 - 37057
Alignment:
Q  159 gtataagtattttgtggactttaaactgagtcatttatgattatata 205  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  37103 gtataagtattttgtgtactttaaacggagtcatttatgactatata 37057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 380
Target Start/End: Complemental strand, 93603 - 93483
Alignment:
Q  261 gatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga-ttgtcgattttgctctttcctttcaatttgaa 359  Q
    ||||| ||||||||||||||||||| ||||| | | ||||||||||||||||||| ||||||||| | |||||||||||||||||| |||| ||  ||||    
T  93603 gatttattatatcgattctacaaaagtagttgaataaaatccttcgattttgattacgattttacaatttgtcgattttgctcttttcttttaacctgaa 93504  T
Q  360 gcaaaatcttgattttgacaa 380  Q
    |||||| | | ||||||||||    
T  93503 gcaaaaccctaattttgacaa 93483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 93632 - 93600
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  93632 aaatccatcgattttgattgcgattttacgatt 93600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 93736 - 93704
Alignment:
Q  297 aaatccttcgattttgattgcgattttacgatt 329  Q
    |||||| ||||||||||||||||||||||||||    
T  93736 aaatccatcgattttgattgcgattttacgatt 93704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 383
Target Start/End: Original strand, 145813 - 145941
Alignment:
Q  255 gattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaat 354  Q
    ||||||| | ||||||||||||||||||||| ||  | ||| ||||||||||||||||||||| ||||||||||| |||||||  || ||| ||||| |     
T  145813 gattttgctatcttatatcgattctacaaaagtaagtgagtaaaatccttcgattttgattgctattttacgattttcgatttaactattttctttcgac 145912  T
Q  355 ttgaagcaaaatcttgattttgacaacct 383  Q
     |||||||||||||  |||||||||||||    
T  145913 ctgaagcaaaatctcaattttgacaacct 145941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 100 - 19
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctt 344  Q
    ||||||||||||||||||||||| | |||| ||| |||||||||||||||| || ||||||||||||||||||||||||||||    
T  100 atttcttatatcgattctacaaagt-agttgagtaaaatccttcgattttggtttcgattttacgattgtcgattttgctctt 19  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 428 - 542
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaag 248  Q
    ||||||||||||| | |||||||| ||||| ||||  ||||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||| | |     
T  428 tcatttatgtatatgcattttgtgcactttgaactttgagtcatttatgactatatgcaatttatatcatatatttagcattatttttgttttggtagaa 527  T
Q  249 tccatcgattttgatt 264  Q
    ||| ||||||||||||    
T  528 tcc-tcgattttgatt 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 38565 - 38475
Alignment:
Q  153 atttatgtataagtattttgtggactttaaactg--agtcatttatgattatatacaatttataacatatatttagcattacttttgtttt 241  Q
    ||||||||||| |||||||||||||||| ||||   |||| ||||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  38565 atttatgtatatgtattttgtggactttgaactttaagtcctttatgactatatacaatttataacatatatttatcattatttttgtttt 38475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 383
Target Start/End: Complemental strand, 38431 - 38303
Alignment:
Q  254 cgattttgatttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgctctttcctttcaa 353  Q
    |||||||| | || || ||||||||||||||| |   | ||| |||||||||||| | |||||| ||||||||| |  |||||||||| ||||||||| |    
T  38431 cgattttgctatcctacatcgattctacaaaagtccatgagtaaaatccttcgatct-gattgcaattttacgagtcccgattttgctatttcctttcga 38333  T
Q  354 tttgaagcaaaatcttgattttgacaacct 383  Q
     |||||| ||| ||  ||||||||||||||    
T  38332 cttgaagtaaagtcccgattttgacaacct 38303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 133149 - 133059
Alignment:
Q  152 catttatgtataagtattttgtggactttaaactgag-tcatttatgattatatacaatttataacatatatttagcattacttttgtttt 241  Q
    |||||||||||| |||||||||||||||| ||||  | |||||||||| ||||| |||||||||||||||||||| ||||| |||||||||    
T  133149 catttatgtatatgtattttgtggactttgaactttggtcatttatgactatatgcaatttataacatatatttaacattaattttgtttt 133059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 133003 - 132947
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    ||||||||||||||| |  || ||  |||||||||||||||||||||||||||||||    
T  133003 atcgattctacaaaagtccttgaggaaaatccttcgattttgattgcgattttacga 132947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 56322 - 56201
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgat-tgtcgattttgctctttcctttcaatttgaag 360  Q
    ||||| |||||||||||||||||| |  || ||| |||||||||||||||||||||||||||| ||| | ||||||||||| || |||||| |  |||||    
T  56322 atttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgatttta-gatgtctcgattttgctattccctttcgacctgaag 56224  T
Q  361 caaaatcttgattttgacaacct 383  Q
     ||| ||| ||||||||||||||    
T  56223 taaagtctcgattttgacaacct 56201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 142724 - 142814
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaact--gagtcatttatgattatatacaatttataacatatatttagcattacttttgttt 240  Q
    ||||||||||||| ||||||| |||||||| ||||  || |||||| ||| ||||| |||||||||||||||||||||||||| ||||||||    
T  142724 tcatttatgtatatgtattttttggactttgaactttgaatcatttttgactatatgcaatttataacatatatttagcatta-ttttgttt 142814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 5247 - 5161
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgag-tcatttatgattatatacaatttataacatatatttagcattactttt 236  Q
    ||||||||||| | |||||||||||||||| ||||  | |||||||||| || || |||||||||||||||||||||||||| ||||    
T  5247 tcatttatgtacatgtattttgtggactttgaactttgatcatttatgactacatgcaatttataacatatatttagcattattttt 5161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 5623 - 5554
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgt 138  Q
    ||||||||||||||||||||| |||| | | |||||||| ||||||||||| | |||| |||| ||||||    
T  5623 atcaaaatcgcacaaaatcgtaaaatccgttcaaaattgtaggattttaaaggattttgaaggcttttgt 5554  T

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Target: scaffold0150 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 338
Target Start/End: Original strand, 33173 - 33246
Alignment:
Q  265 tcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgatttt 338  Q
    ||||||||||||||||||||| ||  | ||| |||| |||||||||||||||||||||||| ||| ||||||||    
T  33173 tcttatatcgattctacaaaagtaagtgagtaaaattcttcgattttgattgcgattttacaattttcgatttt 33246  T

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Target: scaffold0186 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 8580 - 8738
Alignment:
Q  180 taaactgagtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttg--------------attt 265  Q
    |||||| |||||||||||| ||||||| ||||||| ||||||||||| ||||   || |||||| ||| |||||||||||||              ||||    
T  8580 taaactaagtcatttatgactatataccatttataccatatatttagtatta---tttttttggtaaaatccatcgattttgattgcgattttacaattt 8676  T
Q  266 cttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacga 327  Q
    | |||||||||||||| ||| || || ||| ||||||||| |||||||||||||||||||||    
T  8677 cctatatcgattctacgaaaatacttgagtaaaatccttcaattttgattgcgattttacga 8738  T

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Target: scaffold0061 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 76308 - 76257
Alignment:
Q  190 catttatgattatatacaatttataacatatatttagcattacttttgtttt 241  Q
    ||||||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  76308 catttatgactatatacaatttataacatatatttatcattatttttgtttt 76257  T

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Target: scaffold0417 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 7352 - 7273
Alignment:
Q  262 atttcttatatcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||| |||||| |||| |||||| || || ||| ||||||||||||||||||| ||||||||| | | |||||||||||    
T  7352 atttcctatatctattcaacaaaagtacttgagtaaaatccttcgattttgattacgattttacaagtctcgattttgct 7273  T

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Target: scaffold0259 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 18537 - 18604
Alignment:
Q  197 gattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||  | | |||||| |||||||||    
T  18537 gattatatgcaatttataacatatatttagtattatttttgttttgatagaatccatctattttgatt 18604  T

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Target: scaffold0163 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 2871 - 2957
Alignment:
Q  151 tcatttatgtataagtattttgtggactttaaactgag-tcatttatgattatatacaatttataacatatatttagcattactttt 236  Q
    ||||||||||| | ||||||| |||||||| ||||  | |||||||||| || || ||| |||||||||||||||||||||| ||||    
T  2871 tcatttatgtacatgtattttatggactttgaactttgatcatttatgactacatgcaaattataacatatatttagcattattttt 2957  T

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Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 2495 - 2564
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaaacggtttttaaggattttgt 138  Q
    ||||||||||||||||||||| |||| | | |||||||  ||||||||||| | |||| |||| ||||||    
T  2495 atcaaaatcgcacaaaatcgtaaaatccgttcaaaattataggattttaaaggattttgaaggcttttgt 2564  T

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Target: scaffold0079 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 14814 - 14744
Alignment:
Q  271 atcgattctacaaaattagttaagtcaaatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||||| |  || | | ||||||||||||||||||||||||||||||| |  ||||||||||    
T  14814 atcgattctacaaaagtctttgaataaaatccttcgattttgattgcgattttacgagtcccgattttgct 14744  T

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Target: scaffold0079; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 15068 - 15021
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggatttt 116  Q
    ||||||||||||||||||||| |||| ||| |||||| ||||||||||    
T  15068 atcaaaatcgcacaaaatcgtaaaatccattcaaaatcgcaggatttt 15021  T

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Target: scaffold0182 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 24299 - 24348
Alignment:
Q  69 atcaaaatcgcacaaaatcgtgaaattcatacaaaattgcaggattttaa 118  Q
    |||||||||||||||||||||||||| ||| ||||||  |||||||||||    
T  24299 atcaaaatcgcacaaaatcgtgaaatccattcaaaatcacaggattttaa 24348  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 220478 - 220435
Alignment:
Q  298 aatccttcgattttgattgcgattttacgattgtcgattttgct 341  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  220478 aatccttcgatttcgattgcaattttacgattttcgattttgct 220435  T

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Target: scaffold0526 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 8288 - 8363
Alignment:
Q  187 agtcatttatgattatatacaatttataacatatatttagcattacttttgttttggcaaagtccatcgattttgatt 264  Q
    |||||||||||| ||||| |||||||| |||||||||||| ||||  |||||||||| | | ||| ||||||||||||    
T  8288 agtcatttatgactatatgcaatttat-acatatatttagtattatatttgttttggtagaatcc-tcgattttgatt 8363  T

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