View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6548_high_38 (Length: 206)

Name: NF6548_high_38
Description: NF6548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6548_high_38
NF6548_high_38
[»] chr8 (37 HSPs)
chr8 (70-183)||(4247608-4247723)
chr8 (72-171)||(1026942-1027043)
chr8 (72-174)||(7503047-7503152)
chr8 (72-174)||(11575499-11575604)
chr8 (72-174)||(31543165-31543270)
chr8 (72-174)||(16652995-16653100)
chr8 (72-180)||(11785566-11785677)
chr8 (91-174)||(41103618-41103704)
chr8 (72-174)||(1281189-1281294)
chr8 (75-142)||(6315143-6315210)
chr8 (72-174)||(9718572-9718677)
chr8 (91-180)||(42650448-42650540)
chr8 (72-180)||(33922560-33922671)
chr8 (73-142)||(40990278-40990347)
chr8 (75-174)||(11033463-11033565)
chr8 (75-139)||(29358435-29358499)
chr8 (72-142)||(30664442-30664512)
chr8 (72-142)||(37032460-37032530)
chr8 (75-183)||(7979177-7979288)
chr8 (73-142)||(31738504-31738573)
chr8 (91-142)||(3726967-3727018)
chr8 (75-142)||(13405057-13405124)
chr8 (72-139)||(36308927-36308994)
chr8 (72-142)||(30479810-30479880)
chr8 (73-142)||(28083823-28083892)
chr8 (73-142)||(37923172-37923241)
chr8 (72-124)||(29691015-29691067)
chr8 (94-183)||(35694870-35694955)
chr8 (72-142)||(2248533-2248603)
chr8 (92-179)||(10028151-10028241)
chr8 (101-141)||(34633819-34633859)
chr8 (91-142)||(12022255-12022306)
chr8 (91-142)||(27487071-27487122)
chr8 (91-133)||(30581922-30581964)
chr8 (97-142)||(8671912-8671957)
chr8 (97-138)||(38198167-38198208)
chr8 (91-131)||(24243159-24243199)
[»] chr2 (33 HSPs)
chr2 (72-175)||(39732822-39732927)
chr2 (73-180)||(36347635-36347745)
chr2 (72-169)||(36566944-36567044)
chr2 (72-139)||(37739984-37740051)
chr2 (72-142)||(16565858-16565928)
chr2 (76-174)||(15224791-15224892)
chr2 (75-145)||(2241488-2241558)
chr2 (72-142)||(23748176-23748246)
chr2 (73-174)||(39821715-39821819)
chr2 (72-139)||(12541850-12541917)
chr2 (88-139)||(12751899-12751950)
chr2 (91-142)||(31795881-31795932)
chr2 (72-138)||(17379897-17379963)
chr2 (72-142)||(19566914-19566984)
chr2 (92-169)||(40022421-40022501)
chr2 (91-142)||(8426983-8427034)
chr2 (72-174)||(28262536-28262641)
chr2 (91-142)||(41778854-41778905)
chr2 (93-139)||(7681332-7681378)
chr2 (72-124)||(42316857-42316909)
chr2 (91-173)||(886965-887048)
chr2 (72-131)||(9631652-9631711)
chr2 (72-127)||(34209560-34209615)
chr2 (91-146)||(35325346-35325401)
chr2 (72-142)||(9427066-9427136)
chr2 (96-142)||(35736256-35736302)
chr2 (87-180)||(39354282-39354378)
chr2 (98-139)||(32503243-32503284)
chr2 (74-142)||(6721717-6721785)
chr2 (101-145)||(29525855-29525899)
chr2 (91-138)||(18811413-18811460)
chr2 (97-138)||(21662327-21662368)
chr2 (72-108)||(27926668-27926704)
[»] chr7 (34 HSPs)
chr7 (72-169)||(24970258-24970358)
chr7 (72-174)||(33655201-33655306)
chr7 (91-173)||(17852918-17853003)
chr7 (72-174)||(43230282-43230387)
chr7 (76-142)||(22163206-22163272)
chr7 (76-142)||(22221914-22221980)
chr7 (72-175)||(1051592-1051697)
chr7 (75-174)||(41497053-41497155)
chr7 (74-174)||(47390901-47391005)
chr7 (72-174)||(34235100-34235206)
chr7 (72-142)||(25887273-25887343)
chr7 (72-142)||(34228411-34228481)
chr7 (72-142)||(40196625-40196695)
chr7 (91-170)||(18063673-18063751)
chr7 (72-142)||(37417726-37417796)
chr7 (72-145)||(40572327-40572400)
chr7 (91-174)||(39855977-39856063)
chr7 (72-179)||(13771039-13771149)
chr7 (72-116)||(18231693-18231737)
chr7 (72-139)||(41008267-41008332)
chr7 (80-139)||(45940757-45940816)
chr7 (87-142)||(48152061-48152115)
chr7 (72-133)||(4833624-4833685)
chr7 (88-145)||(30891104-30891160)
chr7 (72-132)||(13425213-13425273)
chr7 (91-131)||(20393693-20393733)
chr7 (93-179)||(26365809-26365898)
chr7 (75-137)||(10315719-10315781)
chr7 (72-137)||(32872874-32872939)
chr7 (87-179)||(38378086-38378181)
chr7 (91-139)||(3143564-3143612)
chr7 (91-127)||(18127354-18127390)
chr7 (91-139)||(23116372-23116420)
chr7 (91-139)||(48093977-48094025)
[»] chr5 (31 HSPs)
chr5 (72-142)||(10072740-10072810)
chr5 (72-180)||(9856920-9857031)
chr5 (72-174)||(13634757-13634862)
chr5 (72-174)||(26414939-26415044)
chr5 (72-142)||(7544217-7544287)
chr5 (72-142)||(17024317-17024387)
chr5 (72-138)||(36392243-36392309)
chr5 (72-179)||(37606936-37607045)
chr5 (72-174)||(37551454-37551558)
chr5 (72-174)||(37654284-37654388)
chr5 (72-174)||(28279569-28279675)
chr5 (72-179)||(37779146-37779254)
chr5 (72-180)||(4373659-4373770)
chr5 (77-142)||(10476109-10476174)
chr5 (72-139)||(16501883-16501950)
chr5 (76-142)||(11756958-11757024)
chr5 (72-142)||(36363113-36363183)
chr5 (73-142)||(16938560-16938629)
chr5 (72-141)||(20513538-20513611)
chr5 (93-175)||(9798726-9798811)
chr5 (77-132)||(29002304-29002359)
chr5 (91-142)||(2550464-2550515)
chr5 (72-126)||(20146959-20147013)
chr5 (72-132)||(43497-43558)
chr5 (106-142)||(10650510-10650546)
chr5 (103-138)||(8502959-8502994)
chr5 (91-142)||(33424914-33424965)
chr5 (91-142)||(42681534-42681585)
chr5 (119-174)||(20147016-20147073)
chr5 (89-142)||(10204657-10204710)
chr5 (151-180)||(35176834-35176863)
[»] chr3 (30 HSPs)
chr3 (72-180)||(220490-220601)
chr3 (92-174)||(46204932-46205017)
chr3 (72-142)||(24560298-24560368)
chr3 (76-169)||(27542028-27542124)
chr3 (72-183)||(14898013-14898127)
chr3 (72-174)||(41110414-41110519)
chr3 (72-174)||(52185061-52185167)
chr3 (72-142)||(21773863-21773933)
chr3 (72-142)||(36568996-36569066)
chr3 (73-142)||(18654694-18654763)
chr3 (72-139)||(37102242-37102308)
chr3 (72-142)||(2387853-2387923)
chr3 (72-138)||(9312564-9312630)
chr3 (72-142)||(16275798-16275868)
chr3 (73-142)||(25655064-25655135)
chr3 (72-174)||(30200181-30200289)
chr3 (72-115)||(13082955-13082998)
chr3 (80-174)||(28582610-28582707)
chr3 (72-127)||(37807176-37807231)
chr3 (72-174)||(41040043-41040148)
chr3 (72-139)||(43005832-43005899)
chr3 (82-145)||(51819228-51819291)
chr3 (97-174)||(651777-651857)
chr3 (72-169)||(52473966-52474066)
chr3 (91-140)||(54574473-54574522)
chr3 (101-145)||(46556221-46556265)
chr3 (99-142)||(10748417-10748460)
chr3 (72-138)||(55327455-55327521)
chr3 (110-142)||(31684367-31684399)
chr3 (91-139)||(40463983-40464031)
[»] chr4 (38 HSPs)
chr4 (72-142)||(16400881-16400951)
chr4 (72-142)||(36151657-36151727)
chr4 (72-175)||(45741935-45742041)
chr4 (72-145)||(1968452-1968525)
chr4 (73-142)||(26167018-26167087)
chr4 (72-174)||(54935114-54935220)
chr4 (91-174)||(6891406-6891492)
chr4 (72-142)||(35248767-35248837)
chr4 (74-140)||(44784075-44784141)
chr4 (72-142)||(54320515-54320585)
chr4 (73-142)||(5730924-5730993)
chr4 (73-142)||(27735826-27735895)
chr4 (72-133)||(45132594-45132655)
chr4 (72-141)||(46007794-46007863)
chr4 (92-140)||(28332887-28332935)
chr4 (76-174)||(31348418-31348519)
chr4 (91-142)||(47433820-47433871)
chr4 (91-183)||(22921018-22921114)
chr4 (91-183)||(22970685-22970781)
chr4 (80-142)||(37711224-37711286)
chr4 (72-142)||(41174426-41174496)
chr4 (77-138)||(2917061-2917122)
chr4 (72-142)||(49735561-49735631)
chr4 (91-131)||(17938219-17938259)
chr4 (95-171)||(23332650-23332727)
chr4 (87-128)||(29798379-29798420)
chr4 (91-171)||(43961459-43961542)
chr4 (97-142)||(55510251-55510296)
chr4 (82-142)||(56135830-56135890)
chr4 (87-138)||(14539357-14539408)
chr4 (72-131)||(34110897-34110956)
chr4 (102-132)||(34108349-34108379)
chr4 (92-138)||(54494723-54494769)
chr4 (97-130)||(21695007-21695040)
chr4 (91-131)||(11842399-11842439)
chr4 (91-139)||(17182597-17182645)
chr4 (102-142)||(34995132-34995172)
chr4 (91-127)||(41227576-41227612)
[»] chr1 (28 HSPs)
chr1 (72-180)||(32951411-32951522)
chr1 (73-180)||(30010372-30010482)
chr1 (72-174)||(8529845-8529950)
chr1 (72-139)||(40095026-40095093)
chr1 (72-174)||(41498450-41498555)
chr1 (73-140)||(50744375-50744442)
chr1 (72-142)||(7444576-7444646)
chr1 (72-180)||(42230579-42230689)
chr1 (72-180)||(51597708-51597819)
chr1 (75-139)||(41676363-41676427)
chr1 (72-174)||(10391918-10392023)
chr1 (72-142)||(36285667-36285737)
chr1 (91-141)||(44211017-44211067)
chr1 (72-142)||(45585778-45585848)
chr1 (72-174)||(2859025-2859130)
chr1 (72-142)||(49946681-49946751)
chr1 (72-139)||(35349555-35349622)
chr1 (91-142)||(38510006-38510057)
chr1 (72-142)||(12234091-12234161)
chr1 (72-142)||(26940936-26941006)
chr1 (91-139)||(35927897-35927945)
chr1 (85-142)||(1085596-1085653)
chr1 (73-118)||(20576225-20576270)
chr1 (70-142)||(6563658-6563729)
chr1 (88-142)||(2506620-2506674)
chr1 (97-142)||(33643349-33643394)
chr1 (91-139)||(525211-525259)
chr1 (91-139)||(51303496-51303544)
[»] chr6 (27 HSPs)
chr6 (72-139)||(4097605-4097672)
chr6 (72-174)||(33235997-33236102)
chr6 (91-180)||(30850024-30850116)
chr6 (72-142)||(34176416-34176486)
chr6 (72-144)||(21606937-21607009)
chr6 (75-142)||(13583800-13583867)
chr6 (76-142)||(5585399-5585465)
chr6 (80-142)||(19278139-19278201)
chr6 (73-169)||(14515524-14515621)
chr6 (91-180)||(2892715-2892807)
chr6 (95-180)||(16738112-16738200)
chr6 (72-142)||(30487398-30487468)
chr6 (72-129)||(1300714-1300771)
chr6 (72-179)||(1390360-1390470)
chr6 (75-139)||(1395720-1395784)
chr6 (75-139)||(31849194-31849258)
chr6 (107-145)||(12811108-12811146)
chr6 (72-142)||(25741488-25741558)
chr6 (101-142)||(2893711-2893752)
chr6 (91-131)||(32926737-32926777)
chr6 (85-132)||(16509371-16509418)
chr6 (75-133)||(665937-665995)
chr6 (70-116)||(2900017-2900063)
chr6 (108-142)||(6034201-6034235)
chr6 (75-117)||(10818322-10818364)
chr6 (72-133)||(9719124-9719185)
chr6 (97-142)||(26318386-26318431)
[»] scaffold0262 (1 HSPs)
scaffold0262 (74-142)||(16391-16459)
[»] scaffold0067 (1 HSPs)
scaffold0067 (72-174)||(39280-39388)
[»] scaffold0294 (1 HSPs)
scaffold0294 (77-142)||(15344-15409)
[»] scaffold0096 (1 HSPs)
scaffold0096 (91-174)||(6630-6716)
[»] scaffold0006 (1 HSPs)
scaffold0006 (91-132)||(81523-81564)
[»] scaffold0341 (1 HSPs)
scaffold0341 (70-142)||(18851-18922)
[»] scaffold0783 (1 HSPs)
scaffold0783 (91-132)||(6022-6063)


Alignment Details
Target: chr8 (Bit Score: 76; Significance: 2e-35; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 70 - 183
Target Start/End: Original strand, 4247608 - 4247723
Alignment:
Q  70 agaagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatat-ttaattcataattt-aaaaaagaa 167  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||| |||||||||    
T  4247608 agaagttaacatattagcatgataaacgatcatataatacttaaatcatacttaatttattttaaaaaaacatataataattcataatttaaaaaaagaa 4247707  T
Q  168 aagtaaattctcctct 183  Q
    |||||||  |||||||    
T  4247708 aagtaaaccctcctct 4247723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 1026942 - 1027043
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca--tatttaattcataatttaaaaaagaaaa 169  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || | | |||||||||||||||||    
T  1026942 aagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatttatatagtccgtaatttaaaaaagaaaa 1027041  T
Q  170 gt 171  Q
    ||    
T  1027042 gt 1027043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 7503047 - 7503152
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||   ||| |||| ||||||||||||| ||||    
T  7503047 aagttaacatattaacatgataaacaatcatataatactttaatcacacttaatttattttagaaaaacatgttatataatccataatttaaaaacgaaa 7503146  T
Q  169 agtaaa 174  Q
    ||||||    
T  7503147 agtaaa 7503152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 11575499 - 11575604
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||   ||| |||||  ||||||||||| ||||    
T  11575499 aagttaacatattaacatgataaacgatcatataatactttaatcacacttaatttattttagaaaaacatgttatataatttgtaatttaaaaatgaaa 11575598  T
Q  169 agtaaa 174  Q
    ||||||    
T  11575599 agtaaa 11575604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 31543165 - 31543270
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||   ||| |  | ||||||||||||||||||    
T  31543165 aagttaacatattaacatcataaacggtcatataatacttcaatcacacttaatttattttagaaaaacatgttatatggtccataatttaaaaaagaaa 31543264  T
Q  169 agtaaa 174  Q
    ||||||    
T  31543265 agtaaa 31543270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 16653100 - 16652995
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| || |||||||||||||||||||||||||||| |||| |||||||||| |||||||   ||| || | | ||||||||||||||||    
T  16653100 aagttaacatattaacaaaataaacgatcatataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtaatttaaaaaagaaa 16653001  T
Q  169 agtaaa 174  Q
    ||||||    
T  16653000 agtaaa 16652995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 11785677 - 11785566
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||| ||||||| ||| |||||| | |||||||||||||||||  | ||||| |||||||||||||||   ||| || ||||||||||||||||||||    
T  11785677 aagttagcatattaacatgataaacaaacatataatacttcaatcgcaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaa 11785578  T
Q  169 agtaaattctcc 180  Q
    |||||| |||||    
T  11785577 agtaaactctcc 11785566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 41103618 - 41103704
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaa 174  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||   ||| ||  |  ||||||||||||||||||||||    
T  41103618 ataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcttgtaatttaaaaaagaaaagtaaa 41103704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 1281294 - 1281189
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||||||||||||| |||||||||||||| || |||| |||||| |||||||||||   ||| |  | | ||||||||||||||||    
T  1281294 aagttaacatattaacataataaacgataatataatacttcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaa 1281195  T
Q  169 agtaaa 174  Q
    ||||||    
T  1281194 agtaaa 1281189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 6315210 - 6315143
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||| | | |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  6315210 ttaacatattaacttgataaacgatcgtataatacttcaatcacacttaatttattttagaaaaacat 6315143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 9718572 - 9718677
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||| ||||||| ||| |||||| |||||||||||||||||||| | |||||  |||||||||||| |   ||| || ||||||||||||||||||||    
T  9718572 aagttagcatattaacatgataaacaatcatataatacttcaatcacaattaatgaattttagaaaaatatgttatatagttcataatttaaaaaagaaa 9718671  T
Q  169 agtaaa 174  Q
    ||||||    
T  9718672 agtaaa 9718677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 42650448 - 42650540
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaattctcc 180  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||   ||| || | | ||||||||||| |||||||||| |||||    
T  42650448 ataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacgaaaagtaaactctcc 42650540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 33922671 - 33922560
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||| ||||||| |||||||||||||||| ||||||||||| ||||| |   ||| || | |  |||||||||||||||    
T  33922671 aagttaacatattatcatgataaacaatcatatcatacttcaatcatactaaatttattttaaaaaaatatgttatatagtccggaatttaaaaaagaaa 33922572  T
Q  169 agtaaattctcc 180  Q
    |||||| |||||    
T  33922571 agtaaactctcc 33922560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 40990278 - 40990347
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||||||||| | ||||||    
T  40990278 agttaacatattaacatgataagcgatcatataatacttcaatcagacttaatttattttaaagaaacat 40990347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 11033565 - 11033463
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaac---atatttaattcataatttaaaaaagaaaagt 171  Q
    ||||||||||| ||| |||||||||||||||||  |||||||| || |||||||||||||||||||   |||| || | | | |||||||||||||||||    
T  11033565 ttaacatattaacatgataaacgatcatataattattcaatcacacataatttattttagaaaaacatgatatatagtccgttatttaaaaaagaaaagt 11033466  T
Q  172 aaa 174  Q
    |||    
T  11033465 aaa 11033463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 29358435 - 29358499
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||||||||| ||| |||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  29358435 ttaacatattaacattataaacgatcctataatacttcaatcacacttaatttattctagaaaaa 29358499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 30664512 - 30664442
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||  || ||||||| | ||||||||||||||||| |||||||||||||| |||||||||    
T  30664512 aagttaacatattaatatgataaacggttatataatacttcaatcacacttaatttatttttgaaaaacat 30664442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 37032530 - 37032460
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||  || |||||| |||||||||||||| ||||| ||||||||||||||| ||||||||    
T  37032530 aagttaacatattaagatgataaactatcatataatactttaatcacacttaatttattttaaaaaaacat 37032460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 7979288 - 7979177
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagt 171  Q
    ||||| ||||| ||| |||||  ||||||||||||||||||   |||| ||||||||||||||||||   ||| || | | |||||||||||||||||||    
T  7979288 ttaacttattaacatgataaataatcatataatacttcaattgcacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagt 7979189  T
Q  172 aaattctcctct 183  Q
    ||| ||||||||    
T  7979188 aaactctcctct 7979177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 31738573 - 31738504
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  31738573 agttaacatattaacatgataaatgatcatataatacttcaattacacttaatttattctagagaaacat 31738504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 3726967 - 3727018
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  3726967 ataaacggtcatataatatttcaatcatgcttaatttattttagaaaaacat 3727018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 13405124 - 13405057
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||| ||||| ||| |||||||||||||||||| |||||| |||  |||||||||||||||||||||    
T  13405124 ttaacgtattaacatgataaacgatcatataataattcaattatatataatttattttagaaaaacat 13405057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 36308994 - 36308927
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    |||| ||||||||| ||| |||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  36308994 aagtaaacatattaacatgataaacaatcatataatacttcaatcacacttagtttattttataaaaa 36308927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 30479810 - 30479880
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||   | ||||| ||| ||||||||||||||||| |||| |||||||||||||||||||    
T  30479810 aagttaacatattaaggtgataaatgataatataatacttcaatcacacttgatttattttagaaaaacat 30479880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 28083892 - 28083823
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||| | | ||| |||||| ||||||||||||| |||||| ||||||||||||||||| ||||||    
T  28083892 agttaacatgtcaacatgataaacaatcatataatactccaatcacacttaatttattttagagaaacat 28083823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 37923172 - 37923241
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| |||||| ||| ||||| |||||||||||| || ||||  ||||||||||||||||||||||||    
T  37923172 agttaaaatattaacatgataaatgatcatataatattttaatcgcacttaatttattttagaaaaacat 37923241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 29691015 - 29691067
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaa 124  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||| ||||||    
T  29691015 aagttaacatattaacatgataaacgatcatatgatacttcaatcacacttaa 29691067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 183
Target Start/End: Original strand, 35694870 - 35694955
Alignment:
Q  94 aacgatcatataatacttcaatcatacttaatttattttagaaaaacatatttaattcataatttaaaaaagaaaagtaaattctcctct 183  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||| ||||    | | ||||| ||||||||||| |||||||| ||||    
T  35694870 aacgatcatataatacttcaatcacacttgatttattttaaaaaaatatat----tacttaattaaaaaaagaaaaataaattcttctct 35694955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 2248603 - 2248533
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||| ||||| |||  |||||| |||||||||| | |||||| |||| |||||||||||||||||||    
T  2248603 aagttaacttattaacatcgtaaacggtcatataatattccaatcacacttgatttattttagaaaaacat 2248533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 10028241 - 10028151
Alignment:
Q  92 taaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaattctc 179  Q
    ||||||||||||||| ||||||| || ||||||||||||||| ||||| |   ||| |  | | |||||||||||||||||||||| ||||    
T  10028241 taaacgatcatataagacttcaaccacacttaatttattttaaaaaaatatgttatatggtccgtaatttaaaaaagaaaagtaaaatctc 10028151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 34633859 - 34633819
Alignment:
Q  101 atataatacttcaatcatacttaatttattttagaaaaaca 141  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  34633859 atataatacttcaatcacacttgatttattttagaaaaaca 34633819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 12022255 - 12022306
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||| ||||||||||||||||||  | ||||||||||||||| ||||||||    
T  12022255 ataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacat 12022306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 27487122 - 27487071
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||| ||||||||||||||||||| | ||||||||  ||||||||||||||    
T  27487122 ataaatgatcatataatacttcaataacacttaattggttttagaaaaacat 27487071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 30581922 - 30581964
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttatttta 133  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||    
T  30581922 ataaatgatcatataatacttcaatcacacttaatttgtttta 30581964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 8671912 - 8671957
Alignment:
Q  97 gatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||||||  ||||||||||||||||| ||| ||||    
T  8671912 gatcatataatacttcaaaaatacttaatttattttaaaaatacat 8671957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 38198167 - 38198208
Alignment:
Q  97 gatcatataatacttcaatcatacttaatttattttagaaaa 138  Q
    ||||||||||||||||||||| |||||||| |||||| ||||    
T  38198167 gatcatataatacttcaatcacacttaattcattttaaaaaa 38198208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 24243159 - 24243199
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattt 131  Q
    ||||| ||||||||||||||||||||| |||||||| ||||    
T  24243159 ataaatgatcatataatacttcaatcacacttaattaattt 24243199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 39732822 - 39732927
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca--tatttaattcataatttaaaaaagaaaa 169  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || | | ||||||||||| |||||    
T  39732822 aagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatgtatatagtccgtaatttaaaaacgaaaa 39732921  T
Q  170 gtaaat 175  Q
    ||||||    
T  39732922 gtaaat 39732927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 36347635 - 36347745
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaa 169  Q
    ||||||||||||| ||| |||||| || ||||||||||||||||| |||||||||||||||||||||||   ||| || | | |||||||||||||||||    
T  36347635 agttaacatattaacatgataaacaattatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaa 36347734  T
Q  170 gtaaattctcc 180  Q
    ||||| |||||    
T  36347735 gtaaactctcc 36347745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 36566944 - 36567044
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||| | |||||||||| ||||||||||   ||| |||||||||||||||||| ||||    
T  36566944 aagttaacatattaacatgataaatgatcatataatacttcaatcacaattaatttattatagaaaaacatgttatataattcataatttaaaaacgaaa 36567043  T
Q  169 a 169  Q
    |    
T  36567044 a 36567044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 37739984 - 37740051
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37739984 aagttaagatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaa 37740051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 16565928 - 16565858
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||| |  || ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16565928 aagttaacatataaatatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacat 16565858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 15224791 - 15224892
Alignment:
Q  76 taacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagta 172  Q
    |||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||||   ||| ||   | ||||||||||||||||||||    
T  15224791 taacatattaacatgataaatgatcatataatacttcaatcacacttaatttattctagaaaaacatgttatatagcccgtaatttaaaaaagaaaagta 15224890  T
Q  173 aa 174  Q
    ||    
T  15224891 aa 15224892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 2241558 - 2241488
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt 145  Q
    ||||||||||| ||| |||||| |||||||||||||||||| | |||||||||||||||||||||| ||||    
T  2241558 ttaacatattaacatgataaacaatcatataatacttcaattacacttaatttattttagaaaaacgtatt 2241488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 23748246 - 23748176
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||| |||| ||||||||| |||||||||    
T  23748246 aagttaacatattaacatgataaacgataatataatacttcaatcacacttgatttatttttgaaaaacat 23748176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 73 - 174
Target Start/End: Complemental strand, 39821819 - 39821715
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaa 169  Q
    ||||||||||||| ||| ||||| |||| |||||||||| ||||  |||||||||||||||||||||||   |||  ||| ||||||||||||| |||||    
T  39821819 agttaacatattaacatgataaatgatcttataatacttaaatcgcacttaatttattttagaaaaacatgttatagaatccataatttaaaaatgaaaa 39821720  T
Q  170 gtaaa 174  Q
    |||||    
T  39821719 gtaaa 39821715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 12541917 - 12541850
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||||||| |||| ||| ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  12541917 aagttaacacattaacatgataaacgatcatatagtacttcaatcgcacttaatttattttagaaaaa 12541850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 12751950 - 12751899
Alignment:
Q  88 ataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  12751950 ataataaacgatcatataatacttcaatcacacttaaattattttagaaaaa 12751899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 31795881 - 31795932
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  31795881 ataaacgatcatataatacttcaatcacacttaatttattttaaaaaaacat 31795932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 17379963 - 17379897
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaa 138  Q
    |||||| ||||||| ||| |||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  17379963 aagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaa 17379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 19566914 - 19566984
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| |||||||  || ||||||| || |||||||||||||||| ||||||||||||||||||||||||    
T  19566914 aagttagcatattaaaatgataaacggtcgtataatacttcaatcacacttaatttattttagaaaaacat 19566984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 40022501 - 40022421
Alignment:
Q  92 taaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaa 169  Q
    ||||| |||||||||||||||||||| ||||||||||||||| |||||||   ||| || |||||||||||||||| ||||    
T  40022501 taaacaatcatataatacttcaatcacacttaatttattttacaaaaacatgttatatagttcataatttaaaaaaaaaaa 40022421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 8426983 - 8427034
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  8426983 ataaatgatcatataatacttcaatcgcacttaatttattttagaaaaacat 8427034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 28262536 - 28262641
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    ||||||| ||| || ||| |||||||||||| ||||| |||||||| |  ||||||||||||||||||||   ||| || |  |||||||||||||||||    
T  28262536 aagttaatataataacatgataaacgatcatgtaatatttcaatcacatgtaatttattttagaaaaacatgttatatagtcaataatttaaaaaagaaa 28262635  T
Q  169 agtaaa 174  Q
    ||||||    
T  28262636 agtaaa 28262641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 41778905 - 41778854
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41778905 ataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacat 41778854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 7681378 - 7681332
Alignment:
Q  93 aaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  7681378 aaacgatcatataatacttcaatcacacttaatttattttacaaaaa 7681332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 42316857 - 42316909
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaa 124  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||    
T  42316857 aagttaacgtattaacatgataaacgatcatataatacttcaatcacacttaa 42316909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 887048 - 886965
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt-taattcataatttaaaaaagaaaagtaa 173  Q
    ||||| ||||||||||||||||||||| || |||||||||||| |||| ||| || || |   |||||||||||||||||||||    
T  887048 ataaatgatcatataatacttcaatcacacataatttattttaaaaaagcattttatattgtgtaatttaaaaaagaaaagtaa 886965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 9631711 - 9631652
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattt 131  Q
    |||||||||||||| ||| ||||||||| ||||||||||||| ||| |||| ||||||||    
T  9631711 aagttaacatattaacatgataaacgataatataatacttcattcacacttgatttattt 9631652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 34209615 - 34209560
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaattt 127  Q
    |||||||||||||| ||| |||||| ||||||||| |||||||||| |||||||||    
T  34209615 aagttaacatattaacatgataaacaatcatataacacttcaatcacacttaattt 34209560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 35325401 - 35325346
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatattt 146  Q
    ||||| ||||||||||||||||||  ||||||||||||||||| ||||| ||||||    
T  35325401 ataaatgatcatataatacttcaaaaatacttaatttattttaaaaaaatatattt 35325346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 9427136 - 9427066
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| ||||||||||| |||||| | ||||||||||||||||||  | ||||||| ||| |||||||||    
T  9427136 aagttagcatattagcatgataaacaaacatataatacttcaatcacgcataatttagttttgaaaaacat 9427066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 35736302 - 35736256
Alignment:
Q  96 cgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||||    
T  35736302 cgatcatataatacttcagtcacacttcatttattttagaaaaacat 35736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 39354282 - 39354378
Alignment:
Q  87 cataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaattctcc 180  Q
    |||||||| ||||||| |||||||||||||| ||| | ||||||||||| |||||   ||| ||| |  |||||||||||| ||||||||| |||||    
T  39354282 cataataatcgatcatgtaatacttcaatcacactaactttattttagataaacatgttatataacttgtaatttaaaaaaaaaaagtaaactctcc 39354378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 32503284 - 32503243
Alignment:
Q  98 atcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  32503284 atcatataatattttaatcatacttaatttattttagaaaaa 32503243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 6721717 - 6721785
Alignment:
Q  74 gttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||| || ||| ||| ||||| ||| |||||||| |||||||| |||| |||||||||||||||||||    
T  6721717 gttaatatcttaacatgataaatgataatataatatttcaatcacacttgatttattttagaaaaacat 6721785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 29525855 - 29525899
Alignment:
Q  101 atataatacttcaatcatacttaatttattttagaaaaacatatt 145  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||    
T  29525855 atataatacttcaatcacatttaatttattttaaaaaaacatatt 29525899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 18811460 - 18811413
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaa 138  Q
    |||||| ||||||||||| |||||||| ||||||||||||||| ||||    
T  18811460 ataaacaatcatataatatttcaatcacacttaatttattttaaaaaa 18811413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 21662327 - 21662368
Alignment:
Q  97 gatcatataatacttcaatcatacttaatttattttagaaaa 138  Q
    ||||||||||||||||||||| |||||||| |||||| ||||    
T  21662327 gatcatataatacttcaatcaaacttaattgattttaaaaaa 21662368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 27926704 - 27926668
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataata 108  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  27926704 aagttaacatattaacatgataaacgatcatataata 27926668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 1e-27; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 24970258 - 24970358
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| | | ||||||||||||||||||||||||||| |||||||||||||||||||||||   ||| |||| ||||||||||||||||||    
T  24970258 aagttaacatattaacttgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatataatccataatttaaaaaagaaa 24970357  T
Q  169 a 169  Q
    |    
T  24970358 a 24970358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 33655201 - 33655306
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||   ||| ||   ||||||||||||||||||    
T  33655201 aagttaacatattaacatgataaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcccataatttaaaaaagaaa 33655300  T
Q  169 agtaaa 174  Q
    ||||||    
T  33655301 agtaaa 33655306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 17853003 - 17852918
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaa 173  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||   |||||||| | |||||||||||||||||||||    
T  17853003 ataaacgatcatataatacctcaatcacacttaatttattttagaaaaacatgttatttaatccgtaatttaaaaaagaaaagtaa 17852918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 43230387 - 43230282
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||||||| |||||| ||||||||  |||||||||||||||||||||||   ||| |||| | ||||||||||||||||    
T  43230387 aagttaacatattaacatgataaacgatcgtataattcttcaatcgcacttaatttattttagaaaaacatgttatataatccgtaatttaaaaaagaaa 43230288  T
Q  169 agtaaa 174  Q
    ||||||    
T  43230287 agtaaa 43230282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 22163206 - 22163272
Alignment:
Q  76 taacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22163206 taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacat 22163272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 22221914 - 22221980
Alignment:
Q  76 taacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22221914 taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacat 22221980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 1051592 - 1051697
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||   ||| || ||| ||||||||||||||||    
T  1051592 aagttaacatatta-catgataaacaatcatataatgcttcaatcacacttaatttattttagaaaaacaggttatatagttcgtaatttaaaaaagaaa 1051690  T
Q  169 agtaaat 175  Q
    | |||||    
T  1051691 aataaat 1051697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 41497053 - 41497155
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagt 171  Q
    ||||||||||| ||| ||||| ||||||||||| ||||||||| |||||||||||||||||||||||   ||| || | | |||||||||||||||||||    
T  41497053 ttaacatattaacatgataaatgatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagt 41497152  T
Q  172 aaa 174  Q
    |||    
T  41497153 aaa 41497155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 47391005 - 47390901
Alignment:
Q  74 gttaacatattagcataataaacga-tcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaa 169  Q
    |||||||||||| ||| |||||| | ||||||||||||||||||| | ||||| |||||||||||||||   ||| || |||||||||||||||||||||    
T  47391005 gttaacatattaacatgataaacaagtcatataatacttcaatcacaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaa 47390906  T
Q  170 gtaaa 174  Q
    |||||    
T  47390905 gtaaa 47390901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 34235100 - 34235206
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa-catatt---taattcataatttaaaaaagaa 167  Q
    ||||||||||||||  || |||||| |||||||||||||||||||| ||||||||||||||||||||| ||| ||   |||| | ||||||||||| |||    
T  34235100 aagttaacatattaatatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaaacatgttatataatccgtaatttaaaaatgaa 34235199  T
Q  168 aagtaaa 174  Q
    |||||||    
T  34235200 aagtaaa 34235206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 25887343 - 25887273
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||  || |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  25887343 aagttaacatattaatatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacat 25887273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 34228411 - 34228481
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||  || |||| | |||||||||||||||||||| ||||||||||||||||||||||||    
T  34228411 aagttaacatattaatatgataagcaatcatataatacttcaatcacacttaatttattttagaaaaacat 34228481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 40196625 - 40196695
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||| | | | |||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  40196625 aagttaacatatcaacctgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacat 40196695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 18063673 - 18063751
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatttaattcataatttaaaaaagaaaag 170  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||  ||| | || ||||||||||||||||||||    
T  18063673 ataaatgatcatataatacttcaatcacacttaatttatttta-aaaaaattatattatccataatttaaaaaagaaaag 18063751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 37417726 - 37417796
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||| |||||| ||| ||| |||||||||    
T  37417726 aagttaacatattcacatgataaacgatcatataatacttcaatcacacttaacttaattttgaaaaacat 37417796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 40572327 - 40572400
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt 145  Q
    |||||||||||||| ||| ||||| | ||||||||||||| |||||  |||||||||||||||| |||||||||    
T  40572327 aagttaacatattaacatgataaaaggtcatataatactttaatcacgcttaatttattttagagaaacatatt 40572400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 39855977 - 39856063
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaa 174  Q
    ||||| ||||||||||||||| | ||| |||||||||||||||||||||||   ||| || | | ||||||||||||||||||||||    
T  39855977 ataaatgatcatataatacttaagtcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaa 39856063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 179
Target Start/End: Original strand, 13771039 - 13771149
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||| || |||||| |||  ||||| ||||||||||||||| |||||||   ||| || | | ||||||||||| ||||    
T  13771039 aagttaacatattaacatgataaacaatgatataacactcgaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaacgaaa 13771138  T
Q  169 agtaaattctc 179  Q
    |||||| ||||    
T  13771139 agtaaactctc 13771149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 18231737 - 18231693
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatc 116  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||    
T  18231737 aagttaacatattaacatgataaacgatcatataatacttcaatc 18231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 41008332 - 41008267
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    |||||||||||||| ||| |||||| |||||||||  ||||||||| ||||||||||||||| |||||    
T  41008332 aagttaacatattaacatgataaacaatcatataa--cttcaatcacacttaatttattttaaaaaaa 41008267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 45940757 - 45940816
Alignment:
Q  80 atattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    |||||| |||||||| |||| ||||||||||||||| | | |||||||||||||||||||    
T  45940757 atattaacataataagcgataatataatacttcaattacatttaatttattttagaaaaa 45940816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 48152115 - 48152061
Alignment:
Q  87 cataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  48152115 cataataaatgatcat-taatacttcaatcacactaaatttattttagaaaaacat 48152061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 4833624 - 4833685
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttatttta 133  Q
    |||||||| ||||| ||| |||||| |||||||||||||| ||||| | |||||||||||||    
T  4833624 aagttaacctattaacatgataaacaatcatataatacttaaatcacatttaatttatttta 4833685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 30891104 - 30891160
Alignment:
Q  88 ataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt 145  Q
    |||||||||||| ||||||||||||||||| | |||||||| |||| |||||||||||    
T  30891104 ataataaacgataatataatacttcaatcacatttaattta-tttaaaaaaacatatt 30891160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 13425213 - 13425273
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttatttt 132  Q
    |||| ||||||||| ||| |||||| ||||||| |||||||| ||| ||||||||||||||    
T  13425213 aagtcaacatattaacatgataaacaatcatattatacttcattcacacttaatttatttt 13425273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 20393733 - 20393693
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattt 131  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  20393733 ataaatgatcatataatacttcaatcacacttaatttattt 20393693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 26365898 - 26365809
Alignment:
Q  93 aaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaattctc 179  Q
    |||| |||||||||||||||||||| || || ||||||||||||||| |   ||| || ||  |||| ||||||||||||||||| ||||    
T  26365898 aaacaatcatataatacttcaatcacacctagtttattttagaaaaatatgttatatagtttgtaatataaaaaagaaaagtaaactctc 26365809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 10315781 - 10315719
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaa 137  Q
    ||||||||||| ||  ||||||||| ||||||||||||||||| |||   |||||||||||||    
T  10315781 ttaacatattaacaagataaacgattatataatacttcaatcacactgggtttattttagaaa 10315719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 32872874 - 32872939
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaa 137  Q
    |||||||||||||| ||| ||||||  |||||| ||  |||||| | |||||||||||||||||||    
T  32872874 aagttaacatattaacatgataaacactcatatcatctttcaattaaacttaatttattttagaaa 32872939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 38378181 - 38378086
Alignment:
Q  87 cataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaattctc 179  Q
    ||||||||||||||||||||||| ||||| | | || |||||||||  |||||||   ||| || ||| || ||||||||||||||| ||| ||||    
T  38378181 cataataaacgatcatataatacctcaattacaattgatttatttttaaaaaacatgttatatagttcgtagtttaaaaaagaaaagaaaactctc 38378086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 3143612 - 3143564
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||| ||||||||||||||||||  | ||||||||||||||| |||||    
T  3143612 ataaatgatcatataatacttcaaaaaaacttaatttattttataaaaa 3143564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 18127354 - 18127390
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaattt 127  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  18127354 ataaatgatcatataatacttcaatcacacttaattt 18127390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 23116372 - 23116420
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||| ||| ||||||||||||||||| ||||||||| ||||| |||||    
T  23116372 ataaatgattatataatacttcaatcacacttaattttttttaaaaaaa 23116420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 48094025 - 48093977
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||| ||||||||||||||| || || ||||||||||||||| |||||    
T  48094025 ataaatgatcatataatactttaaccacacttaatttattttaaaaaaa 48093977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 1e-27; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 10072740 - 10072810
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10072740 aagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 10072810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 9857031 - 9856920
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||   ||| || | | ||||||||||||||||    
T  9857031 aagttaacatattaacataataaacgatcatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccttaatttaaaaaagaaa 9856932  T
Q  169 agtaaattctcc 180  Q
    | |||| |||||    
T  9856931 actaaactctcc 9856920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 13634862 - 13634757
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||||||||||||||| |||||||| || ||||||||||||||||||||   ||| || | | | ||||||||||||||    
T  13634862 aagttaacatattaacatgataaacgatcatataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaa 13634763  T
Q  169 agtaaa 174  Q
    ||||||    
T  13634762 agtaaa 13634757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 26415044 - 26414939
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat---atttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||||| |||||||||||||||||| ||||||| ||||||||||||||||   || || | | ||||||||||| ||||    
T  26415044 aagttaacatattaacatgataaacgaccatataatacttcaatcacacttaatatattttagaaaaacatgtcatatagtccgtaatttaaaaacgaaa 26414945  T
Q  169 agtaaa 174  Q
    ||||||    
T  26414944 agtaaa 26414939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 7544287 - 7544217
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  7544287 aagttagcatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacat 7544217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 17024317 - 17024387
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| ||||||| ||| | |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17024317 aagttatcatattaacatgaaaaacgatcatataatacttcaatcgtacttaatttattttagaaaaacat 17024387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 36392243 - 36392309
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaa 138  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  36392243 aagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatctattttagaaaa 36392309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 179
Target Start/End: Complemental strand, 37607045 - 37606936
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca--tatttaattcataatttaaaaaagaaaa 169  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| |  |||||||||||| |||||||  ||| || | | ||||||||||| |||||    
T  37607045 aagttaacatattaacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacatttatatagtccttaatttaaaaacgaaaa 37606946  T
Q  170 gtaaattctc 179  Q
    ||||| ||||    
T  37606945 gtaaactctc 37606936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 37551558 - 37551454
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaac--atatttaattcataatttaaaaaagaaaa 169  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||||||  ||||||   ||| || | ||||||||||||| |||||    
T  37551558 aagttaacatattaacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaacttttatatagtccataatttaaaaacgaaaa 37551459  T
Q  170 gtaaa 174  Q
    |||||    
T  37551458 gtaaa 37551454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 37654388 - 37654284
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaac--atatttaattcataatttaaaaaagaaaa 169  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||||||  ||||||   ||| || | ||||||||||||| |||||    
T  37654388 aagttaacatattaacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaacttttatatagtccataatttaaaaacgaaaa 37654289  T
Q  170 gtaaa 174  Q
    |||||    
T  37654288 gtaaa 37654284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 28279569 - 28279675
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa-catatt---taattcataatttaaaaaagaa 167  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||| ||| ||   || | ||||||||||||| |||    
T  28279569 aagttaacatattaacatgataaatgatcatataatacttcaatcacacttagtttattttagaaaaaacatgttatatattccataatttaaaaaggaa 28279668  T
Q  168 aagtaaa 174  Q
    |||||||    
T  28279669 aagtaaa 28279675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 179
Target Start/End: Complemental strand, 37779254 - 37779146
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatat-ttaattcataatttaaaaaagaaaag 170  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| |  |||||||||||| |||||||| |  || | | ||||||||||| ||||||    
T  37779254 aagttaacatattaacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacatttaatagtccttaatttaaaaacgaaaag 37779155  T
Q  171 taaattctc 179  Q
    |||| ||||    
T  37779154 taaactctc 37779146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 4373659 - 4373770
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaac---atatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| ||||| |||||||||||| |||||||| ||||||||||||||  ||||||    ||| || | | ||||||||||||||||    
T  4373659 aagttaacatattaacatgataaatgatcatataatatttcaatcacacttaatttatttttaaaaaacttgttatatagtccgtaatttaaaaaagaaa 4373758  T
Q  169 agtaaattctcc 180  Q
    ||||||| ||||    
T  4373759 agtaaatcctcc 4373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 10476174 - 10476109
Alignment:
Q  77 aacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||  || ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  10476174 aacatattaagatgataaacgattatataatacttcaatcacacttaatttattttagaaaaacat 10476109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 16501883 - 16501950
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    |||||||||||||| ||||||||| |||||||||| |||| ||||| |||| ||||||||||||||||    
T  16501883 aagttaacatattaacataataaatgatcatataaaactttaatcacacttgatttattttagaaaaa 16501950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 11757024 - 11756958
Alignment:
Q  76 taacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||| ||| ||||| ||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  11757024 taacatattaacatcataaatgatcatataatactttaatcacacttaatttattttagagaaacat 11756958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 36363183 - 36363113
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||||||| |||||| || |||||| |||||||| | |||| |||||||||||||||||||    
T  36363183 aagttaacatattagcatgataaacaatgatataaaacttcaatgacacttgatttattttagaaaaacat 36363113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 16938629 - 16938560
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||| ||| ||| ||||| |||||||||||| |||||||| ||||||||||||||||| ||||||    
T  16938629 agttaacatgttaacatgataaatgatcatataatatttcaatcacacttaatttattttagagaaacat 16938560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 20513538 - 20513611
Alignment:
Q  72 aagttaacatattagcataataaacgatcatat----aatacttcaatcatacttaatttattttagaaaaaca 141  Q
    |||||||||||||| ||| ||||||||||||||    ||||||||||||| ||||||||||||||| |||||||    
T  20513538 aagttaacatattatcatgataaacgatcatatatataatacttcaatcacacttaatttattttataaaaaca 20513611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 9798726 - 9798811
Alignment:
Q  93 aaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaat 175  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||   ||| ||||   |||||| ||||||||||||||||    
T  9798726 aaacgatcatataatacttcaatcacaattaatttatttaagaaaaacatgttatataatctgtaattttaaaaagaaaagtaaat 9798811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 29002304 - 29002359
Alignment:
Q  77 aacatattagcataataaacgatcatataatacttcaatcatacttaatttatttt 132  Q
    ||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  29002304 aacatattaacatgataaacgatcatataatactacaatcatatttaatttatttt 29002359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 2550464 - 2550515
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| |||||||||||||||||||| || ||||||||| |||||||||||    
T  2550464 ataaacaatcatataatacttcaatcacacgtaatttattatagaaaaacat 2550515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 20146959 - 20147013
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatt 126  Q
    |||||||||||||| ||| |||| ||||||||||||| |||||||| ||||||||    
T  20146959 aagttaacatattaacatgataagcgatcatataatatttcaatcacacttaatt 20147013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 43558 - 43497
Alignment:
Q  72 aagttaacatattagcataataaacgat-catataatacttcaatcatacttaatttatttt 132  Q
    |||||||||||||| ||||||||| ||| ||| |||||||||| ||||||||||||| ||||    
T  43558 aagttaacatattaacataataaaagatacatgtaatacttcagtcatacttaatttttttt 43497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 10650546 - 10650510
Alignment:
Q  106 atacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10650546 atacttcaatcacacttaatttattttagaaaaacat 10650510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 8502959 - 8502994
Alignment:
Q  103 ataatacttcaatcatacttaatttattttagaaaa 138  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8502959 ataatacttcaatcacacttaatttattttagaaaa 8502994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 33424914 - 33424965
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||| ||||||||||||||| ||||| | ||||||||||||| ||||||||    
T  33424914 ataaatgatcatataatactttaatcagatttaatttattttataaaaacat 33424965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 42681585 - 42681534
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||| ||||||||||||||| ||||| ||| || |||||||||||||||||    
T  42681585 ataaatgatcatataatactttaatcacactaaaattattttagaaaaacat 42681534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 20147016 - 20147073
Alignment:
Q  119 acttaatttattttagaaaaaca--tatttaattcataatttaaaaaagaaaagtaaa 174  Q
    |||||||||||||||||||||||  ||| |||| | ||||||||||| ||||||||||    
T  20147016 acttaatttattttagaaaaacatgtatataatccgtaatttaaaaatgaaaagtaaa 20147073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 10204710 - 10204657
Alignment:
Q  89 taataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||| ||||||||||||||||||  | ||||||||||||||| ||| ||||    
T  10204710 taataaatgatcatataatacttcaaaaacacttaatttattttaaaaagacat 10204657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 180
Target Start/End: Original strand, 35176834 - 35176863
Alignment:
Q  151 cataatttaaaaaagaaaagtaaattctcc 180  Q
    ||||||||||||||||||||||||||||||    
T  35176834 cataatttaaaaaagaaaagtaaattctcc 35176863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 220490 - 220601
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt---taattcataatttaaaaaagaaa 168  Q
    |||||||||||||| |||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||| ||   || | | ||||||||||||||||    
T  220490 aagttaacatattaacataataaacaatcttataacacttcaatcatacttgatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaa 220589  T
Q  169 agtaaattctcc 180  Q
    ||||||||||||    
T  220590 agtaaattctcc 220601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 46205017 - 46204932
Alignment:
Q  92 taaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaa 174  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||   ||| || ||||||||||||||||||||||||||    
T  46205017 taaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaa 46204932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 24560368 - 24560298
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  24560368 aagttaacatattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacat 24560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 27542028 - 27542124
Alignment:
Q  76 taacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaa 169  Q
    |||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |   ||| || |||||||||||||||||||||    
T  27542028 taacatattaacatgataaacgatcatataatacttcaatcacagttaatttattttagaaaaatatgttatatagttcataatttaaaaaagaaaa 27542124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 14898127 - 14898013
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat---atttaattcataatttaaaaaagaaa 168  Q
    ||||||| |||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||   || || |   ||||||||||||||||    
T  14898127 aagttaatatattaacacgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgtcatatagtctgtaatttaaaaaagaaa 14898028  T
Q  169 agtaaattctcctct 183  Q
    |||||| | ||||||    
T  14898027 agtaaaatttcctct 14898013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 41110414 - 41110519
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||| |||||||||||||||||||| |||||||||||||| ||||||||   ||| || | | ||||||||||| ||||    
T  41110414 aagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttcgaaaaacatgttatctagtccgtaatttaaaaacgaaa 41110513  T
Q  169 agtaaa 174  Q
    ||||||    
T  41110514 agtaaa 41110519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 52185167 - 52185061
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa-catatt---taattcataatttaaaaaagaa 167  Q
    |||||||||||||| ||| |||||| |||||||||||||||||| ||| ||||||||||||||||||| ||| ||   |||||  ||||||||||| |||    
T  52185167 aagttaacatattaacatgataaacaatcatataatacttcaattatatttaatttattttagaaaaaacatgttatataatttgtaatttaaaaacgaa 52185068  T
Q  168 aagtaaa 174  Q
    |||||||    
T  52185067 aagtaaa 52185061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 21773933 - 21773863
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||  ||| |||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  21773933 aagttaacatatttacatgataaacaatcatataattcttcaatcacacttaatttattttagaaaaacat 21773863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 36568996 - 36569066
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| ||| |||||| ||| ||||||| |||||||| ||||||||||||||||||||||||    
T  36568996 aagttaacatattaacatgataaacaatcgtataatagttcaatcacacttaatttattttagaaaaacat 36569066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 18654694 - 18654763
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  18654694 agttaacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacat 18654763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 37102242 - 37102308
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    |||||||||||||| |||||||| ||||||||||||||||||| || |||| ||||||||||||||||    
T  37102242 aagttaacatattaacataataa-cgatcatataatacttcaaccacacttgatttattttagaaaaa 37102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 2387853 - 2387923
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||| ||| || ||| |||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  2387853 aagttaaaataataacatgataaacgatcatataataatttaatcacacttaatttattttagaaaaacat 2387923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 9312564 - 9312630
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaa 138  Q
    |||||||||||||| ||| |||||| |||||||||||||  ||||| ||||||||||||||||||||    
T  9312564 aagttaacatattaacatgataaacaatcatataatactcaaatcacacttaatttattttagaaaa 9312630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 16275798 - 16275868
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||| ||||| ||| |||||| | |||||||||||||||||| |||| |||||||||||||||||||    
T  16275798 aagttaacttattaacatgataaacaaccatataatacttcaatcacacttgatttattttagaaaaacat 16275868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 25655064 - 25655135
Alignment:
Q  73 agttaacatattagcataataaacgatcatat--aatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||  || ||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  25655064 agttaacatattaatatgataaatgatcatatataatacttcaatcacacttaatttattttagaaaaacat 25655135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 30200181 - 30200289
Alignment:
Q  72 aagttaacatattagcataataaac---gatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaag 165  Q
    ||||| |||||||| ||||||||||   ||||||||| ||||| ||||| |||| ||||||||||||||||||   ||| || | | |||||||||||||    
T  30200181 aagtttacatattaacataataaacaacgatcatatagtactttaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaag 30200280  T
Q  166 aaaagtaaa 174  Q
    |||||||||    
T  30200281 aaaagtaaa 30200289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 13082955 - 13082998
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaat 115  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  13082955 aagttaacatattaacataataaacgatcatataatacttcaat 13082998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 28582610 - 28582707
Alignment:
Q  80 atattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaa 174  Q
    |||||| ||||||||||||| |||||||||||||| || |||| |||||| |||||||||||   ||| |  | | ||||||||||||||||||||||    
T  28582610 atattaacataataaacgataatataatacttcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaa 28582707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 37807231 - 37807176
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaattt 127  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  37807231 aagttaatatattaacatgataaacgatcatataatacttcaatcacacttaattt 37807176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 41040043 - 41040148
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||  |||| ||||||||| |||| ||   ||| |||| | ||||||||||  ||||    
T  41040043 aagttaacatattaacatgataaacaatcatataatacttcaatcacgcttactttattttaaaaaatcatgttatctaatccgtaatttaaaagcgaaa 41040142  T
Q  169 agtaaa 174  Q
    ||||||    
T  41040143 agtaaa 41040148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 43005832 - 43005899
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||||||||||||  || |||||  |||||||||||||||||||| | | |||||||||||||||||    
T  43005832 aagttaacatattaatatgataaaatatcatataatacttcaatcaaattaaatttattttagaaaaa 43005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 51819228 - 51819291
Alignment:
Q  82 attagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt 145  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||||||||||| ||||| |||||    
T  51819228 attaacatgataaacgatcgtataatacttcaatcacactaaatttattttaaaaaaatatatt 51819291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 651857 - 651777
Alignment:
Q  97 gatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaa 174  Q
    |||| ||||||| || ||||| |||||||||||||||||||||||   ||| || |  |||||||||||||||||||||||    
T  651857 gatcgtataatattttaatcacacttaatttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaa 651777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 52474066 - 52473966
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    ||||||||||||||  || ||||||  ||||||||||||||||||| |  |||||||||||| || ||||   ||| |||| | ||||||||||||||||    
T  52474066 aagttaacatattaatatgataaacagtcatataatacttcaatcacatgtaatttattttaaaataacatgttatataatccgtaatttaaaaaagaaa 52473967  T
Q  169 a 169  Q
    |    
T  52473966 a 52473966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 54574473 - 54574522
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaac 140  Q
    ||||||| | |||||||||||||||||  |||||||||||||||||||||    
T  54574473 ataaacggttatataatacttcaatcacgcttaatttattttagaaaaac 54574522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 46556265 - 46556221
Alignment:
Q  101 atataatacttcaatcatacttaatttattttagaaaaacatatt 145  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||    
T  46556265 atataatacttcaatcacactcaatttattttggaaaaacatatt 46556221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 10748417 - 10748460
Alignment:
Q  99 tcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||  |||| ||||||||||||||||||||||||    
T  10748417 tcatataatacttttatcacacttaatttattttagaaaaacat 10748460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 55327521 - 55327455
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaa 138  Q
    |||||| | ||||| |||||||||||| |||||||| ||||||||| | || |||||||| ||||||    
T  55327521 aagttagcgtattaacataataaacgaacatataatgcttcaatcacatttgatttatttaagaaaa 55327455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 142
Target Start/End: Complemental strand, 31684399 - 31684367
Alignment:
Q  110 ttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||| ||||||||||||||||||||||||    
T  31684399 ttcaatcacacttaatttattttagaaaaacat 31684367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 40463983 - 40464031
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    |||||| ||||||||| | |||||||  |||||||||||||||||||||    
T  40463983 ataaacaatcatataaaaattcaatctcacttaatttattttagaaaaa 40464031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 3e-25; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 16400951 - 16400881
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16400951 aagttaacatattaacatgataaacgatcatataatacttcaatcataattaatttattttagaaaaacat 16400881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 36151727 - 36151657
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36151727 aagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacat 36151657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 45742041 - 45741935
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||||||||||||   ||| || | | |||||||||||| |||    
T  45742041 aagttaacatattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacaagttatatagtccgtaatttaaaaaacaaa 45741942  T
Q  169 agtaaat 175  Q
    |||||||    
T  45741941 agtaaat 45741935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 1968452 - 1968525
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt 145  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| || | ||||||||||||||||||||||    
T  1968452 aagttaacatattaacatgataaacgatcatataatacttcaatcacacctgatttattttagaaaaacatatt 1968525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 26167087 - 26167018
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  26167087 agttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagagaaacat 26167018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 54935220 - 54935114
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataa-tacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaa 167  Q
    |||||| |||||||  || |||||||||||||||| ||||||||||| |||||||||||||||||||||||   ||| || ||| |||||||||||||||    
T  54935220 aagttatcatattaatatgataaacgatcatataaatacttcaatcacacttaatttattttagaaaaacatgttatatagttcgtaatttaaaaaagaa 54935121  T
Q  168 aagtaaa 174  Q
    |||||||    
T  54935120 aagtaaa 54935114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 6891492 - 6891406
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaa 174  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||   ||| |||||  || |||||||||||||| ||||    
T  6891492 ataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatataatttgtattttaaaaaagaaaaataaa 6891406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 35248837 - 35248767
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||| ||||| ||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  35248837 aagttaacgtattaacatgataaataatcatataatacttcaatcacacttaatttattttagaaaaacat 35248767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 44784141 - 44784075
Alignment:
Q  74 gttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaac 140  Q
    |||||||||||| | | ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  44784141 gttaacatattaaccttataaacgatcatataatacttcaatcacacttaatttactttagaaaaac 44784075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 54320585 - 54320515
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| ||||||| ||| |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  54320585 aagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacat 54320515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 5730924 - 5730993
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  5730924 agttaacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacat 5730993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 27735895 - 27735826
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  27735895 agttagcatattaacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacat 27735826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 45132594 - 45132655
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttatttta 133  Q
    ||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||    
T  45132594 aagttaacatattaaaatgataaacgatcatataatacttcaatcacacttaatttatttta 45132655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 46007794 - 46007863
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca 141  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||  ||||||||||||||| |||||||    
T  46007794 aagttaacatattaacatgataaatgatcatataatacttcaatctcacttaatttattttacaaaaaca 46007863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 28332935 - 28332887
Alignment:
Q  92 taaacgatcatataatacttcaatcatacttaatttattttagaaaaac 140  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28332935 taaacgatcatataatacttcaatcatacttaatttactttagaaaaac 28332887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 31348418 - 31348519
Alignment:
Q  76 taacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagta 172  Q
    |||||||||| ||| |||||| ||||||||||| |||||||| || ||||||||||||||||||||   ||| || | | | ||||||||||||||||||    
T  31348418 taacatattaacatgataaacaatcatataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagta 31348517  T
Q  173 aa 174  Q
    ||    
T  31348518 aa 31348519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 47433820 - 47433871
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  47433820 ataaacgatcatataatacttcaatcacacttaatttattttaaaaaaacat 47433871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 22921114 - 22921018
Alignment:
Q  91 ataaacgatcatataatacttcaatcatac-ttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaattctcctct 183  Q
    ||||||||||||||||||||||||||| || || ||||||| ||||||||||   ||| || ||  |||||||||||||||| ||||||||||||||    
T  22921114 ataaacgatcatataatacttcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaacgtaaattctcctct 22921018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 22970685 - 22970781
Alignment:
Q  91 ataaacgatcatataatacttcaatcatac-ttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaattctcctct 183  Q
    ||||||||||||||||||||||||||| || || ||||||| ||||||||||   ||| || ||  |||||||||||||||| ||||||||||||||    
T  22970685 ataaacgatcatataatacttcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaacgtaaattctcctct 22970781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 37711286 - 37711224
Alignment:
Q  80 atattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  37711286 atattaacatgataaatgatcatataatacttcaatcacacttaatttattttagagaaacat 37711224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 41174496 - 41174426
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| ||||||| ||||||||| ||||||||||||| ||||||| | || |||||||||||||||||||    
T  41174496 aagttagcatattaacataataaatgatcatataatacatcaatcacatttgatttattttagaaaaacat 41174426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 2917061 - 2917122
Alignment:
Q  77 aacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaa 138  Q
    ||||||||| ||| ||||||||||||||||||||||||||| | | ||||||||||||||||    
T  2917061 aacatattaacatgataaacgatcatataatacttcaatcacaataaatttattttagaaaa 2917122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 49735561 - 49735631
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||| ||||| ||| ||||||||| |||||||| ||| |||| |||| |||||||||||||||||||    
T  49735561 aagttaacctattaacatgataaacgataatataatatttctatcacacttgatttattttagaaaaacat 49735631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 17938219 - 17938259
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattt 131  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  17938219 ataaacgatcatataatacttcaatcacacttaatttattt 17938259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 23332650 - 23332727
Alignment:
Q  95 acgatcatataatacttcaatcatacttaatttattttagaaaaacatatttaattc--ataatttaaaaaagaaaagt 171  Q
    |||||||||||||||||| |||| |||||||||| |||| ||||||||   ||||||  ||||||||||||||||||||    
T  23332650 acgatcatataatacttctatcacacttaattta-tttaaaaaaacattcataattcttataatttaaaaaagaaaagt 23332727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 29798420 - 29798379
Alignment:
Q  87 cataataaacgatcatataatacttcaatcatacttaattta 128  Q
    ||||||||||||||||||||||||||||||| |||| |||||    
T  29798420 cataataaacgatcatataatacttcaatcacacttgattta 29798379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 43961542 - 43961459
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt---taattcataatttaaaaaagaaaagt 171  Q
    ||||| ||||||||||||||||||  | ||||||||||||||| |||||||| ||   |  |||||||||||||||| ||||||    
T  43961542 ataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcataatttaaaaaataaaagt 43961459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 55510296 - 55510251
Alignment:
Q  97 gatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  55510296 gatcatataatacttcagtcacacttaatttattttaaaaaaacat 55510251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 56135890 - 56135830
Alignment:
Q  82 attagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||| ||| ||||| ||||||||||||||||||  | ||||||||||||||| ||||||||    
T  56135890 attaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacat 56135830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 14539408 - 14539357
Alignment:
Q  87 cataataaacgatcatataatacttcaatcatacttaatttattttagaaaa 138  Q
    ||||||||| ||||||||||||||||||  | ||||||||||||||| ||||    
T  14539408 cataataaatgatcatataatacttcaaaaacacttaatttattttaaaaaa 14539357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 34110956 - 34110897
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattt 131  Q
    |||||||||||||| ||| |||||||||||||||||| || || || ||||| |||||||    
T  34110956 aagttaacatattaacatgataaacgatcatataatattttaagcacacttactttattt 34110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 34108349 - 34108379
Alignment:
Q  102 tataatacttcaatcatacttaatttatttt 132  Q
    |||||||||||||||||||||||||||||||    
T  34108349 tataatacttcaatcatacttaatttatttt 34108379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 54494769 - 54494723
Alignment:
Q  92 taaacgatcatataatacttcaatcatacttaatttattttagaaaa 138  Q
    ||||| |||||||||||||||||||| |||||| |||||||| ||||    
T  54494769 taaacaatcatataatacttcaatcacacttaacttattttaaaaaa 54494723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 21695007 - 21695040
Alignment:
Q  97 gatcatataatacttcaatcatacttaatttatt 130  Q
    ||||||||||||||||||||| ||||||||||||    
T  21695007 gatcatataatacttcaatcacacttaatttatt 21695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 11842439 - 11842399
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattt 131  Q
    ||||| ||||||||||||||||||||| |||||||| ||||    
T  11842439 ataaatgatcatataatacttcaatcagacttaattcattt 11842399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 17182597 - 17182645
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||| ||||||||||||||||||  | ||||||||||||||| |||||    
T  17182597 ataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaa 17182645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 34995172 - 34995132
Alignment:
Q  102 tataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||  | ||||||||||||||||||||||||    
T  34995172 tataatacttcaaaaacacttaatttattttagaaaaacat 34995132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 41227612 - 41227576
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaattt 127  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  41227612 ataaatgatcatataatacttcaatcacacttaattt 41227576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 1e-24; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 32951411 - 32951522
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt---taattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||| |||||||||||||||||||||||| ||   || | | ||||||||||| ||||    
T  32951411 aagttaacatattaacatgataaacgatcgtataatacttcaatcacacttaatttattttagaaaaacatgttctatagtccgtaatttaaaaacgaaa 32951510  T
Q  169 agtaaattctcc 180  Q
    |||||| |||||    
T  32951511 agtaaactctcc 32951522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 73 - 180
Target Start/End: Complemental strand, 30010482 - 30010372
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaa 169  Q
    ||||||||||||| ||| |||||||||||||||||||||||| || |||||||||||||||||||||||   ||| || | | ||||||||| |||||||    
T  30010482 agttaacatattaacattataaacgatcatataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaatttaaacaagaaaa 30010383  T
Q  170 gtaaattctcc 180  Q
    |||||| ||||    
T  30010382 gtaaatcctcc 30010372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 8529950 - 8529845
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||| | |||||||   ||| || ||  ||||||||||||||||    
T  8529950 aagttaacatattaacatggtaaacgatcatataatacttcaatcacacttaatttatttaaaaaaaacatgttatatagtttgtaatttaaaaaagaaa 8529851  T
Q  169 agtaaa 174  Q
    ||||||    
T  8529850 agtaaa 8529845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 40095026 - 40095093
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||||||| |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40095026 aagttaacaaattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaa 40095093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 41498555 - 41498450
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt---taattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||  ||||||| ||| ||   || ||||||||||||||| ||||    
T  41498555 aagttaacatattaacatgataaacgatcatataatacttcaatcacacttaacttatcgtagaaaatcatgttaaatagttcataatttaaaaacgaaa 41498456  T
Q  169 agtaaa 174  Q
    ||||||    
T  41498455 agtaaa 41498450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 50744375 - 50744442
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaac 140  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  50744375 agttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagagaaac 50744442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 7444646 - 7444576
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||  |||| |||||||||||||    
T  7444646 aagttaacatattaacataataaacgatcatataatacttcaatcacacttggtttaatttagaaaaacat 7444576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 42230689 - 42230579
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt---taattcataatttaaaaaagaaa 168  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||| ||||||||||||||  |||||||| ||   ||||  ||||||| ||||| |||    
T  42230689 aagttaaaatattaacataataaacaatcatataatacttcaatcacacttaatttatttttaaaaaacatgttaaataatcaataattttaaaaa-aaa 42230591  T
Q  169 agtaaattctcc 180  Q
    ||||||||||||    
T  42230590 agtaaattctcc 42230579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 51597819 - 51597708
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    ||||||||||||||  || |||||| |||||||||||||||||||| ||||||||||||||| |||||||   ||| || | | | ||||||||||||||    
T  51597819 aagttaacatattaagatgataaacaatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtgatttaaaaaagaaa 51597720  T
Q  169 agtaaattctcc 180  Q
    |||||| |||||    
T  51597719 agtaaactctcc 51597708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 41676427 - 41676363
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||||||||| ||| |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  41676427 ttaacatattaacatgataaacgatcatataatactacaatcacacttaatttattttagaaaaa 41676363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 10392023 - 10391918
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat---atttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| ||||||| ||||||||||||| ||||| | ||||||||||||||||||||||   || || | | ||||||||||| ||||    
T  10392023 aagttaacatattaacatgataaacggtcatataatactttaatcacaattaatttattttagaaaaacatgtaatatagtccgtaatttaaaaatgaaa 10391924  T
Q  169 agtaaa 174  Q
    ||||||    
T  10391923 agtaaa 10391918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 36285667 - 36285737
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| |||| || ||||||| ||||||||    
T  36285667 aagttaacatattaacatgataaacgatcatataatacttcaatcacacttgatatattttaaaaaaacat 36285737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 44211017 - 44211067
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca 141  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44211017 ataaacgatcatataatacttcaatcacacttaatttattttagaaaaaca 44211067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 45585778 - 45585848
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| ||| ||||||||||||||| |||||| |||| ||||||||||||||| ||||||||    
T  45585778 aagttaacatattaacatgataaacgatcatatagtacttcgatcacacttaatttattttaaaaaaacat 45585848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 2859025 - 2859130
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    ||||||||||| |  ||| |||||| |||||||||||||||||||| |||||||||||||| ||||||||   ||| || | | |||||||||||| |||    
T  2859025 aagttaacatacttacattataaacaatcatataatacttcaatcacacttaatttatttttgaaaaacatgttatatagtccgtaatttaaaaaataaa 2859124  T
Q  169 agtaaa 174  Q
    ||||||    
T  2859125 agtaaa 2859130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 49946681 - 49946751
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| ||| |||||  |||||||||||||||||||| | ||||||||||||| ||||||||    
T  49946681 aagttaacatattaacatgataaattatcatataatacttcaatcacatttaatttattttaaaaaaacat 49946751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 35349555 - 35349622
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    |||||||||||||| ||| |||||| |||||||||||||||||| |  |||| |||||||||||||||    
T  35349555 aagttaacatattaacatgataaacaatcatataatacttcaataacccttagtttattttagaaaaa 35349622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 38510006 - 38510057
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  38510006 ataaacgataatataatacttcaatcacacttgatttattttagaaaaacat 38510057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 12234161 - 12234091
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| ||||||| ||||||| | |||||||| |||| ||||||| |||| |||||||||||||||||||    
T  12234161 aagttagcatattaacataatatatgatcatattatacatcaatcacacttgatttattttagaaaaacat 12234091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 26940936 - 26941006
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||| ||||| |||  |||||  ||||||||||||||||||| |||| |||||||||||||||||||    
T  26940936 aagttaacttattaacatcgtaaacagtcatataatacttcaatcacacttgatttattttagaaaaacat 26941006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 35927945 - 35927897
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  35927945 ataaatgatcatataatacttcaaaaatacttaatttattttagaaaaa 35927897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 1085596 - 1085653
Alignment:
Q  85 agcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||| ||||| ||||||||||||||||||  | ||||||||||||||| ||||||||    
T  1085596 agcatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacat 1085653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 20576225 - 20576270
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcat 118  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||||    
T  20576225 agttaatatattaacatgataaacgatcatataatacttcaatcat 20576270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 6563729 - 6563658
Alignment:
Q  70 agaagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||| |||||| ||| ||||| |||||||||||| |||||| | || |||||||||||||||| ||||    
T  6563729 agaagttaatatattaacatgataaa-gatcatataataattcaatgacacataatttattttagaaagacat 6563658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 2506674 - 2506620
Alignment:
Q  88 ataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||| ||||||||||||||||||  | ||||||||||||||  ||||||||    
T  2506674 ataataaatgatcatataatacttcaaaaacacttaatttattttgaaaaaacat 2506620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 33643394 - 33643349
Alignment:
Q  97 gatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||||||  | ||||||||||||||| ||||||||    
T  33643394 gatcatataatacttcaaaaacacttaatttattttaaaaaaacat 33643349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 525211 - 525259
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||| ||| |||||||||||||| || ||||||||||||||| |||||    
T  525211 ataaatgattatataatacttcaaacaaacttaatttattttaaaaaaa 525259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 51303496 - 51303544
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||| ||||||||||||||||||  | ||||||||||||||| |||||    
T  51303496 ataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaa 51303544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 5e-21; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 4097605 - 4097672
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  4097605 aagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttggaaaaa 4097672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 33236102 - 33235997
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaa 168  Q
    |||||||||||||| ||| |||||| |||||||||| |||||||||  ||||||||||||||||||||||   ||| || | | ||||||||||||||||    
T  33236102 aagttaacatattaacatgataaacaatcatataattcttcaatcagtcttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaa 33236003  T
Q  169 agtaaa 174  Q
    ||||||    
T  33236002 agtaaa 33235997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 30850024 - 30850116
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatatt---taattcataatttaaaaaagaaaagtaaattctcc 180  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||   ||||||||||||||||| | ||||||||| |||||    
T  30850024 ataaacgatcatataatacttcaattatactaaatttgttttaaaaaaacatattatataattcataatttaaaataaaaaagtaaactctcc 30850116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 34176486 - 34176416
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||    
T  34176486 aagttaacatattaacataataaacgatcgtataatactgcaatcacacttgatttattttagaaaaacat 34176416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 21606937 - 21607009
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatat 144  Q
    |||||||||||||| ||| |||||||||| |||||||||||| ||| |||| |||||||||||||||||||||    
T  21606937 aagttaacatattaacatgataaacgatcgtataatacttcagtcacactttatttattttagaaaaacatat 21607009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 13583867 - 13583800
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||| ||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  13583867 ttaacatgttaacataataaatgatcatataatatttcaatcacacttaatttattttagaaaaacat 13583800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 5585399 - 5585465
Alignment:
Q  76 taacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||| ||||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||    
T  5585399 taacatattaacataataaacgattatacaatatttcaatcacacttaatttattttagaaaaacat 5585465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 19278139 - 19278201
Alignment:
Q  80 atattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||| ||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  19278139 atattaacatgataaacgatcatatgatacttcaatcagactaaatttattttagaaaaacat 19278201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 14515621 - 14515524
Alignment:
Q  73 agttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca-tatttaattcataatttaaaaaagaaaa 169  Q
    ||||||||||| | ||| ||||| ||| ||||||||||||| ||| ||||||||||||||||| ||||| ||| || | | |||||||||||||||||    
T  14515621 agttaacatatgaacatgataaatgataatataatacttcattcacacttaatttattttagagaaacattatctagtccgtaatttaaaaaagaaaa 14515524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 2892715 - 2892807
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaac---atatttaattcataatttaaaaaagaaaagtaaattctcc 180  Q
    |||||| ||||||||||| |||||||| ||| ||||||||||||||||||    ||| || | | || |||||||||||||||||||||||||    
T  2892715 ataaacaatcatataatatttcaatcacactaaatttattttagaaaaacgtgttatatagtccgtagtttaaaaaagaaaagtaaattctcc 2892807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 16738112 - 16738200
Alignment:
Q  95 acgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaattctcc 180  Q
    ||||||||||||||||| ||| | ||||| |||||||||||||||||   ||| ||||   |||||||||||||||||||||| |||||    
T  16738112 acgatcatataatacttaaataacacttactttattttagaaaaacattttatataatctgtaatttaaaaaagaaaagtaaactctcc 16738200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 30487398 - 30487468
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||| ||||||||| ||| |||||| || ||||||||||||||||| |||| |||||||||| ||||||||    
T  30487398 aagtcaacatattaacatgataaacaataatataatacttcaatcacacttgatttattttataaaaacat 30487468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 1300771 - 1300714
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttat 129  Q
    |||||||||||||| | | |||||| |||||||||||||||||||| |||||||||||    
T  1300771 aagttaacatattaacctgataaacaatcatataatacttcaatcacacttaatttat 1300714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 179
Target Start/End: Complemental strand, 1390470 - 1390360
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaa-aaacatatt---taattcataatttaaaaaagaa 167  Q
    |||||||||||||| ||| ||||| ||||| |||||| |||||||| |||||||||||||||||| |||||| ||   || | | |||||| ||||||||    
T  1390470 aagttaacatattaacatgataaatgatca-ataatatttcaatcaaacttaatttattttagaataaacatgttacatagtccgtaattttaaaaagaa 1390372  T
Q  168 aagtaaattctc 179  Q
    || |||||||||    
T  1390371 aattaaattctc 1390360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 1395784 - 1395720
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||||||||||||| ||||| |||||| || || |||||||| ||||||||||||||| |||||    
T  1395784 ttaacatattagcatgataaatgatcatgtattatttcaatcacacttaatttattttataaaaa 1395720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 31849258 - 31849194
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaa 139  Q
    ||||||||||| | | |||||| || ||||||||||||||||| |||| ||||||||||||||||    
T  31849258 ttaacatattaacgtgataaacaataatataatacttcaatcacacttgatttattttagaaaaa 31849194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 145
Target Start/End: Original strand, 12811108 - 12811146
Alignment:
Q  107 tacttcaatcatacttaatttattttagaaaaacatatt 145  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  12811108 tacttcaatcacacttaatttattttagaaaaacatatt 12811146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 25741558 - 25741488
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||| ||  || |||||||||||||||| |||||| |||  |||||||||||||| ||||||||    
T  25741558 aagttaacataataatatgataaacgatcatataaaacttcagtcacgcttaatttattttaaaaaaacat 25741488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 2893752 - 2893711
Alignment:
Q  101 atataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  2893752 atataatacatcaatcacacttaatttattttagaaaaacat 2893711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 32926777 - 32926737
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattt 131  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  32926777 ataaatgatcatataatacttcaatcacacttaatttattt 32926737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 16509418 - 16509371
Alignment:
Q  85 agcataataaacgatcatataatacttcaatcatacttaatttatttt 132  Q
    ||||||||| | ||||||||||||||||||||| |||| |||||||||    
T  16509418 agcataatagatgatcatataatacttcaatcacacttgatttatttt 16509371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 665937 - 665995
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatcatacttaatttatttta 133  Q
    ||||||||||| ||| ||||| ||| |||||||||||||| || ||||||||| |||||    
T  665937 ttaacatattaacatgataaatgatgatataatacttcaaccacacttaatttttttta 665995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 2900063 - 2900017
Alignment:
Q  70 agaagttaacatattagcataataaacgatcatataatacttcaatc 116  Q
    |||||||||||||||| ||| |||||| |||||||||||| ||||||    
T  2900063 agaagttaacatattaacatgataaacaatcatataatacatcaatc 2900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 6034201 - 6034235
Alignment:
Q  108 acttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  6034201 acttcaatcacacttaatttattttagaaaaacat 6034235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 10818364 - 10818322
Alignment:
Q  75 ttaacatattagcataataaacgatcatataatacttcaatca 117  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||    
T  10818364 ttaacatattaacatgataaatgatcatataatacttcaatca 10818322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 9719124 - 9719185
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttatttta 133  Q
    ||||||||||||||   | |||||| |||||||||||||||||||| ||| |||||| ||||    
T  9719124 aagttaacatattaatttgataaacaatcatataatacttcaatcacactaaatttaattta 9719185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 26318431 - 26318386
Alignment:
Q  97 gatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||||||||||||  | ||||||||||||||| ||||||||    
T  26318431 gatcatataatacttcaaaaacacttaatttattttaaaaaaacat 26318386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 16391 - 16459
Alignment:
Q  74 gttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    |||||||||||| ||| |||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  16391 gttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttagacaaacat 16459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 39280 - 39388
Alignment:
Q  72 aagttaacatattagcataataaacgatcatataatacttc---aatcatacttaatttattttagaaaaacatatt---taattcataatttaaaaaag 165  Q
    |||||||||||||| ||| ||||| ||||||||||||||||   ||||| |||||||||||||||||||||||| ||   || | | |||||||||||||    
T  39280 aagttaacatattaacatgataaatgatcatataatacttcttcaatcacacttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaag 39379  T
Q  166 aaaagtaaa 174  Q
    |||||||||    
T  39380 aaaagtaaa 39388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 15409 - 15344
Alignment:
Q  77 aacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||| | | |||||| ||||||||||||||||| || ||||||||||||||||||||||||    
T  15409 aacatattaacgtgataaacaatcatataatacttcaaccacacttaatttattttagaaaaacat 15344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 6716 - 6630
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttattttagaaaaaca---tatttaattcataatttaaaaaagaaaagtaaa 174  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||||   ||| || |   ||||||||||||||||||||||    
T  6716 ataaacgatcatataatacttcaatcacactaaatttattttagaataacaagttatatagtctgtaatttaaaaaagaaaagtaaa 6630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 81523 - 81564
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttatttt 132  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  81523 ataaatgatcatataatacttcaatcatacttgatttatttt 81564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 18922 - 18851
Alignment:
Q  70 agaagttaacatattagcataataaacgatcatataatacttcaatcatacttaatttattttagaaaaacat 142  Q
    ||||||||| |||||| ||| ||||| |||||||||||| |||||| | || |||||||||||||||| ||||    
T  18922 agaagttaatatattaacatgataaa-gatcatataataattcaatgacacataatttattttagaaagacat 18851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0783 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0783
Description:

Target: scaffold0783; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 6022 - 6063
Alignment:
Q  91 ataaacgatcatataatacttcaatcatacttaatttatttt 132  Q
    ||||| ||||||||||||||| |||||||||| |||||||||    
T  6022 ataaatgatcatataatacttgaatcatacttgatttatttt 6063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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