View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6550_high_11 (Length: 317)

Name: NF6550_high_11
Description: NF6550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6550_high_11
NF6550_high_11
[»] chr6 (11 HSPs)
chr6 (16-307)||(18781699-18781992)
chr6 (26-302)||(20419557-20419833)
chr6 (26-302)||(30518204-30518480)
chr6 (26-302)||(20414824-20415100)
chr6 (26-303)||(18553296-18553572)
chr6 (91-303)||(20417469-20417682)
chr6 (20-154)||(20417683-20417817)
chr6 (47-248)||(6230608-6230808)
chr6 (179-223)||(21299398-21299442)
chr6 (115-175)||(2147847-2147908)
chr6 (182-223)||(12639527-12639568)
[»] chr1 (8 HSPs)
chr1 (20-303)||(22062061-22062345)
chr1 (16-303)||(20127017-20127304)
chr1 (58-303)||(6473763-6474008)
chr1 (63-303)||(20190344-20190588)
chr1 (66-303)||(24156970-24157210)
chr1 (179-223)||(37260438-37260482)
chr1 (112-175)||(40554445-40554509)
chr1 (117-175)||(48463137-48463195)
[»] chr8 (5 HSPs)
chr8 (26-303)||(20730831-20731108)
chr8 (180-249)||(18446237-18446306)
chr8 (179-223)||(16417556-16417600)
chr8 (179-223)||(18774305-18774349)
chr8 (115-175)||(23015809-23015870)
[»] scaffold0010 (1 HSPs)
scaffold0010 (16-302)||(136703-136989)
[»] chr5 (7 HSPs)
chr5 (26-303)||(4568208-4568484)
chr5 (62-303)||(244359-244599)
chr5 (63-303)||(29950111-29950351)
chr5 (63-303)||(29951749-29951989)
chr5 (115-258)||(11126378-11126518)
chr5 (109-268)||(34597760-34597919)
chr5 (179-219)||(22821301-22821341)
[»] chr7 (9 HSPs)
chr7 (63-303)||(9595354-9595594)
chr7 (63-303)||(9646317-9646557)
chr7 (26-303)||(32706295-32706574)
chr7 (24-175)||(5247437-5247589)
chr7 (179-223)||(16157057-16157101)
chr7 (116-211)||(14575569-14575663)
chr7 (116-211)||(14578845-14578939)
chr7 (179-223)||(21368645-21368689)
chr7 (179-223)||(22707689-22707733)
[»] scaffold0017 (1 HSPs)
scaffold0017 (26-303)||(4511-4788)
[»] scaffold0076 (1 HSPs)
scaffold0076 (20-303)||(54722-55005)
[»] chr2 (8 HSPs)
chr2 (26-302)||(6050142-6050419)
chr2 (61-302)||(15409791-15410031)
chr2 (26-303)||(33809331-33809611)
chr2 (199-303)||(23732364-23732468)
chr2 (112-175)||(44792884-44792948)
chr2 (179-223)||(44794775-44794819)
chr2 (115-175)||(24808197-24808258)
chr2 (136-175)||(31939075-31939114)
[»] chr4 (14 HSPs)
chr4 (61-303)||(15017560-15017802)
chr4 (61-303)||(15019200-15019442)
chr4 (20-303)||(17266614-17266902)
chr4 (20-303)||(34098671-34098953)
chr4 (66-303)||(39488067-39488304)
chr4 (63-302)||(9167179-9167418)
chr4 (20-210)||(17780664-17780859)
chr4 (42-211)||(23090830-23090998)
chr4 (234-303)||(20264955-20265024)
chr4 (93-159)||(19460135-19460201)
chr4 (109-175)||(19180483-19180550)
chr4 (179-220)||(11475673-11475714)
chr4 (115-175)||(19459912-19459973)
chr4 (115-174)||(11099045-11099105)
[»] chr3 (15 HSPs)
chr3 (59-303)||(5553462-5553706)
chr3 (28-288)||(17236774-17237030)
chr3 (94-297)||(22271157-22271364)
chr3 (189-303)||(23433138-23433251)
chr3 (16-96)||(16345391-16345473)
chr3 (115-249)||(16019425-16019556)
chr3 (179-223)||(13179891-13179935)
chr3 (179-223)||(13184549-13184593)
chr3 (116-211)||(13956976-13957070)
chr3 (116-211)||(15381933-15382027)
chr3 (116-211)||(15387669-15387763)
chr3 (115-175)||(16347198-16347259)
chr3 (182-223)||(33757970-33758011)
chr3 (115-175)||(47418036-47418097)
chr3 (116-211)||(13962709-13962803)
[»] scaffold0585 (1 HSPs)
scaffold0585 (27-303)||(790-1065)
[»] scaffold0083 (1 HSPs)
scaffold0083 (20-303)||(33166-33451)
[»] scaffold0146 (3 HSPs)
scaffold0146 (28-303)||(6576-6849)
scaffold0146 (28-299)||(9471-9740)
scaffold0146 (28-299)||(17138-17407)
[»] scaffold0075 (1 HSPs)
scaffold0075 (16-261)||(25720-25966)
[»] scaffold0096 (1 HSPs)
scaffold0096 (105-302)||(22534-22730)
[»] scaffold0269 (1 HSPs)
scaffold0269 (63-133)||(1490-1560)
[»] scaffold0671 (1 HSPs)
scaffold0671 (179-223)||(2155-2199)
[»] scaffold0359 (1 HSPs)
scaffold0359 (179-223)||(8768-8812)
[»] scaffold0065 (1 HSPs)
scaffold0065 (179-223)||(33780-33824)
[»] scaffold0003 (1 HSPs)
scaffold0003 (179-223)||(288993-289037)
[»] scaffold0254 (1 HSPs)
scaffold0254 (115-175)||(24311-24372)
[»] scaffold0180 (1 HSPs)
scaffold0180 (115-175)||(10850-10911)
[»] scaffold0139 (1 HSPs)
scaffold0139 (115-175)||(6465-6526)
[»] scaffold0018 (1 HSPs)
scaffold0018 (115-175)||(141-202)
[»] scaffold0002 (1 HSPs)
scaffold0002 (115-175)||(374790-374851)
[»] scaffold0025 (1 HSPs)
scaffold0025 (115-175)||(55425-55486)
[»] scaffold0013 (1 HSPs)
scaffold0013 (115-175)||(241614-241675)


Alignment Details
Target: chr6 (Bit Score: 258; Significance: 1e-143; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 16 - 307
Target Start/End: Original strand, 18781699 - 18781992
Alignment:
Q  16 gcaacaagtgctctataaattgtaagtttctctatgaaatagaaaag-gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18781699 gcaacaagtgctctataaattgtaagtttctctatgaaatagaaaaaagttgaatattatagaattttacacatatgtgtattgagagctttgtctcttg 18781798  T
Q  115 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18781799 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 18781898  T
Q  215 ggcgtccctgtctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattca-taatttgcttccgacggctctgtg 307  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  18781899 ggcgtccctgtctatccattccatttcttcatcttttagtcttttcaccatttccaccaacaatattcattaatttgcttccgacggctctgtg 18781992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 26 - 302
Target Start/End: Complemental strand, 20419833 - 20419557
Alignment:
Q  26 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 125  Q
    ||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  20419833 ctctataaattgtaagtttctctatgaaataaagggagttgaattttatagaattttacacatatgtgtattgagagtcttgtctcttgtggttctggat 20419734  T
Q  126 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20419733 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 20419634  T
Q  226 ctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggct 302  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  20419633 ctatccattccatttcttcatcttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggct 20419557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 26 - 302
Target Start/End: Complemental strand, 30518480 - 30518204
Alignment:
Q  26 ctctataaattgtaagtttctctatgaaatagaaaa-ggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctgga 124  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30518480 ctctataaattgtaactttctctatgaaataaaaaaaggttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctgga 30518381  T
Q  125 ttgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctg 224  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30518380 ttgaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctg 30518281  T
Q  225 tctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggct 302  Q
    |||||||||| || |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  30518280 tctatccatttcatttcttcat-ttttagtcttttcaccattttcaccaacaatattcataatttgcttccgacggct 30518204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 26 - 302
Target Start/End: Complemental strand, 20415100 - 20414824
Alignment:
Q  26 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 125  Q
    ||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20415100 ctctataaattgtaagtttctctatgaaataaagggagttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggat 20415001  T
Q  126 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20415000 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttagattagaaagtgtggcgtccctgt 20414901  T
Q  226 ctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggct 302  Q
    |||||||||| | |||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  20414900 ctatccattcaatttcttcatcttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggct 20414824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 26 - 303
Target Start/End: Original strand, 18553296 - 18553572
Alignment:
Q  26 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 125  Q
    ||||||||||||||| |||||||||||||||  | | ||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  18553296 ctctataaattgtaactttctctatgaaataagataagttgaattttatagaattttacacat--gtgtattgagagccttgtctcttgtggttctggat 18553393  T
Q  126 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18553394 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 18553493  T
Q  226 ctatccattccagttcttca-ttttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    ||||| |||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18553494 ctatcaattccatttcttcatttttttagtcttctcaccatttccaccaacattattcataatttgcttccgacggctc 18553572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 91 - 303
Target Start/End: Complemental strand, 20417682 - 20417469
Alignment:
Q  91 gtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagactta 190  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20417682 gtgtattgagagccttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagactta 20417583  T
Q  191 tcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcatt-ttttagtcttttcaccatttccaccaacattattcataattt 289  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  20417582 tcactttcttggattagaaagtgtggcgtccctgtctatcaattccatttcttcatttttttagtcttctcaccatttccaccaacattattcataattt 20417483  T
Q  290 gcttccgacggctc 303  Q
    ||||||||||||||    
T  20417482 gcttccgacggctc 20417469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 20417817 - 20417683
Alignment:
Q  20 caagtgctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 119  Q
    |||| |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20417817 caagagctctataaattgtaagtttcattatgaaatagaaaaagttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggtt 20417718  T
Q  120 ctggattgaaccaaccttgatcttatcaagaaatc 154  Q
    |||||||||||||||||||||||||||||||||||    
T  20417717 ctggattgaaccaaccttgatcttatcaagaaatc 20417683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 47 - 248
Target Start/End: Complemental strand, 6230808 - 6230608
Alignment:
Q  47 ctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatc 146  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  6230808 ctatgaaataaaaaag-ttgaattttgtagaattttacacatatgtgtattgagagttttgactcttgtggttctggattgaaccatccttgatcttatc 6230710  T
Q  147 aagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaagtgtggcgtccctgtctatccattccagttcttc 244  Q
    ||||||||| ||||||| |||||||| |  ||||||| | |||||||  |||| |||||||  |||| |||  |  ||||||||||||||||| ||||||    
T  6230709 aagaaatcacatttcttatggcgatctt--catccatcggcttatcattcttttttggattgaaaagagtgtggcgcctgtctatccattccatttcttc 6230612  T
Q  245 attt 248  Q
    ||||    
T  6230611 attt 6230608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 21299442 - 21299398
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  21299442 tccatagacttatcattttctaggattagaaagtgtggcgtccct 21299398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 2147908 - 2147847
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  2147908 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 2147847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 12639527 - 12639568
Alignment:
Q  182 atagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  12639527 atagacttatcattttctaggattagaaagtgtggcgtccct 12639568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 20 - 303
Target Start/End: Complemental strand, 22062345 - 22062061
Alignment:
Q  20 caagtgctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 119  Q
    |||| |||||||||||||||||||||  ||||||||| |  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062345 caagagctctataaattgtaagtttcattatgaaataaaggaagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 22062246  T
Q  120 ctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062245 ctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgt 22062146  T
Q  220 ccctgtctatccattccagttcttcatt-ttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062145 ccctgtctatccattccatttcttcatttttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 22062061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 303
Target Start/End: Original strand, 20127017 - 20127304
Alignment:
Q  16 gcaacaagtgctctataaattgtaagtttctctatgaaat-agaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttg 114  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20127017 gcaacaagtgctctataaattgtaagtttctctatgaaatgaaaaaaagttgaatattatagaattttacacatatgtgtattgagagctttgtctcttg 20127116  T
Q  115 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 214  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20127117 tggttctggattgaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcgctttcttggattagaaagtgt 20127216  T
Q  215 ggcgtccctgtctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  20127217 ggcgtccctgtctatccattccatttcttca-gttttagtcttttcaccattttcaccaacaatattcataatttgcttccgacggctc 20127304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 58 - 303
Target Start/End: Original strand, 6473763 - 6474008
Alignment:
Q  58 aaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcata 157  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  6473763 aaaaagttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggattgaatcatccttgatcttatcaagaaatcaca 6473862  T
Q  158 tttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtctt 257  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6473863 tttcttgtgacgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtctt 6473962  T
Q  258 ttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  6473963 ttcaccatttccaccaacattaatcataatttgcttccgacggctc 6474008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 63 - 303
Target Start/End: Complemental strand, 20190588 - 20190344
Alignment:
Q  63 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 162  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||  ||||    
T  20190588 gttgaactttgtagaattttacacttatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagacattat-gttct 20190490  T
Q  163 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcat-----tttttagtctt 257  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||     |||||||||||    
T  20190489 tgtggcaatcctcgcttccatagacttatcagtttcttggattagaaagtgtggcgtccttgtctatccattccatttcttcattttaatttttagtctt 20190390  T
Q  258 ttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20190389 ttcaccatttccaccaacattattcataagttgcttccgacggctc 20190344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 66 - 303
Target Start/End: Complemental strand, 24157210 - 24156970
Alignment:
Q  66 gaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||| ||||||||    
T  24157210 gaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttatggatcgaaccatccttgatcttatcaagaaatcat-tttcttgt 24157112  T
Q  166 ggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcatttt-----ttagtcttttc 260  Q
    || ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||     | |||| ||||    
T  24157111 ggtgatcctcgcatccattgacttatcactttcttgaattagaaagtgcggcgtccctgtctatccattccatttcttcattttaattttgagtcatttc 24157012  T
Q  261 accatttccaccaacattattcataatttgcttccgacggctc 303  Q
    ||| |||||||||  |||||||||| || ||||||||||||||    
T  24157011 accttttccaccataattattcatagtt-gcttccgacggctc 24156970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 37260438 - 37260482
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  37260438 tccatagacttatcattttctaggattagaaagtgtggcgtccct 37260482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 40554445 - 40554509
Alignment:
Q  112 ttgtggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    |||||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  40554445 ttgtggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 40554509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 48463137 - 48463195
Alignment:
Q  117 gttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||   ||||||||||||||||| ||  ||||||||| ||||||||    
T  48463137 gttctggattgaaccattattgatcttatcaagaaaccacgtttcttgtgacgatcctc 48463195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 26 - 303
Target Start/End: Original strand, 20730831 - 20731108
Alignment:
Q  26 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 125  Q
    ||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20730831 ctctataaattgtaactttctctatgaaataagataggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 20730930  T
Q  126 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20730931 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 20731030  T
Q  226 ctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||| | ||||||| | |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  20731031 ctatccattcaatttcttcaatctttagtcttttcaccatttccatcaacattattcttaatttgcttccgacggctc 20731108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 18446237 - 18446306
Alignment:
Q  180 ccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcatttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| ||||||    
T  18446237 ccatagacttatcactttcttggattagaaagtgtggcgtccctttctttccattccatttctccatttt 18446306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 16417600 - 16417556
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  16417600 tccatagacttatcattttctaggattagaaagtgtggcgtccct 16417556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 18774349 - 18774305
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  18774349 tccatagacttatcattttctaggattagaaagtgtggcgtccct 18774305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 23015870 - 23015809
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  23015870 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 23015809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 16 - 302
Target Start/End: Original strand, 136703 - 136989
Alignment:
Q  16 gcaacaagtgctctataaattgtaagtttctctatgaaatagaaaag-gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttg 114  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  136703 gcaacaagtgctctataaattgtaagtttctctatgaaataaaaaaaagttgaatattatagaattttacacatatgtgtattgagagctttgtctcttg 136802  T
Q  115 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 214  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  136803 tggttctggattaaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 136902  T
Q  215 ggcgtccctgtctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggct 302  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  136903 ggcgtccctgtctatccaatccatttcttca-tttttagtcttttcaccatttccatcaacattattcttaatttccttccgacggct 136989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 26 - 303
Target Start/End: Original strand, 4568208 - 4568484
Alignment:
Q  26 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 125  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  4568208 ctctataaattgtaactttctctatgaaataaaaaaagttgaattttatagaattttatacttatgtgtattgagagctttgtctcttgtggttctggat 4568307  T
Q  126 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 225  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4568308 tgaaccattcttgatcttatcaaaaaatcatatttcttgtggcgatcctcgcatccatagacttatcacttttttggattagaaagtgtggcgtccctgt 4568407  T
Q  226 ctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4568408 ctatccatt-catttcttcattttttagtcttttcaccatttccaccaacaatattcataatttgcttccgacggctc 4568484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 62 - 303
Target Start/End: Complemental strand, 244599 - 244359
Alignment:
Q  62 ggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  244599 ggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttc 244500  T
Q  162 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttca 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  244499 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcat-ttttagtcttttca 244401  T
Q  262 ccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  244400 ccattttcaccaacaatattcataatttgcttccgacggctc 244359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 63 - 303
Target Start/End: Original strand, 29950111 - 29950351
Alignment:
Q  63 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29950111 gttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 29950210  T
Q  163 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttcac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||     
T  29950211 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattacatttcttcattttttagtcttttcat 29950310  T
Q  263 catttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||||| |||||||||||  |||||||||||||    
T  29950311 catttccaccaacaatattcataattcacttccgacggctc 29950351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 63 - 303
Target Start/End: Original strand, 29951749 - 29951989
Alignment:
Q  63 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29951749 gttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 29951848  T
Q  163 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttcac 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||     
T  29951849 tgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattacatttcttcattttttagtcttttcat 29951948  T
Q  263 catttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||||| |||||||||||  |||||||||||||    
T  29951949 catttccaccaacaatattcataattcacttccgacggctc 29951989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 258
Target Start/End: Complemental strand, 11126518 - 11126378
Alignment:
Q  115 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 214  Q
    ||||||| ||||| |||||  |||||| |||||||||  |   |||||||||| |||||||    ||||||||||| |||||||||||||||||||||||    
T  11126518 tggttcttgattggaccaattttgatcatatcaagaatcc---tttcttgtggtgatcctcaatcccatagacttaccactttcttggattagaaagtgt 11126422  T
Q  215 ggcgtccctgtctatccattccagttcttcattttttagtcttt 258  Q
    ||| ||||||| | ||||||||| ||||  |||||| |||||||    
T  11126421 ggcatccctgtatttccattccatttctcaatttttgagtcttt 11126378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 268
Target Start/End: Original strand, 34597760 - 34597919
Alignment:
Q  109 ctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatc--actttcttggatta 206  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||   ||| |||| | ||||||  ||||||   |||||||   |||||||| ||||    
T  34597760 ctcttgtggttctggattgaaccatcctt-atcttatcaagaaatc--cttttttgtagagatcct--catccaccaacttatcgttctttcttgaatta 34597854  T
Q  207 gaa--agtgtggcgtccctgtctatccattccagttcttcatt-ttttagtcttttcaccatttc 268  Q
    |||  ||||| | || | ||||||||||||||| ||||||||| ||| |||||||||||| ||||    
T  34597855 gaaagagtgtagtgttcttgtctatccattccatttcttcattgtttgagtcttttcaccttttc 34597919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 22821341 - 22821301
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgt 219  Q
    ||||||||||||||| |||||  ||||||||||||||||||    
T  22821341 tccatagacttatcattttctaagattagaaagtgtggcgt 22821301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 63 - 303
Target Start/End: Complemental strand, 9595594 - 9595354
Alignment:
Q  63 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9595594 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttct 9595495  T
Q  163 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttcac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  9595494 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccatttcatttcttcattttttagtcttttcac 9595395  T
Q  263 catttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  9595394 catttccaccaacaatattcataatttgcttccgacggctc 9595354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 63 - 303
Target Start/End: Complemental strand, 9646557 - 9646317
Alignment:
Q  63 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9646557 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttct 9646458  T
Q  163 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttcac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  9646457 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccatttcatttcttcattttttagtcttttcac 9646358  T
Q  263 catttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  9646357 catttccaccaacaatattcataatttgcttccgacggctc 9646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 26 - 303
Target Start/End: Original strand, 32706295 - 32706574
Alignment:
Q  26 ctctataaattgtaagtttctctatgaaatagaaa-aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctgga 124  Q
    ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32706295 ctctataaattgtaactttctctatgaaataaaaagaagttgaattttatagaattttacacatatgtgtattaagagctttgtctcttgtggttctgga 32706394  T
Q  125 ttgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctg 224  Q
    |||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||     
T  32706395 ttgaaccatccttgatcttatcaagaaatcacatttcttgtggcaatcctcgcatctatagacttatcactttcttggattagaaagtgtggtgtccctc 32706494  T
Q  225 tctatccattccagttcttcattttt-tagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||| ||| || |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32706495 tctatctatttcatttcttcatttttctagttttttcaccatttccaccaacattattcttaatttgcttccgacggctc 32706574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 5247589 - 5247437
Alignment:
Q  24 tgctctataaattgtaagtttctctat-gaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctg 122  Q
    |||||||||||||||||||||  |||  |||||| || | |||||||| | ||||||||||||| |||| || |||||||||||||||||| ||||||||    
T  5247589 tgctctataaattgtaagttttcctaaagaaataaaacaagttgaattgtgtagaattttacacgtatgagtgttgagagctttgtctcttatggttctg 5247490  T
Q  123 gattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||| || ||||||||||||||||||||||||||| |||||| |||||||    
T  5247489 gattgaatcatccttgatcttatcaagaaatcatattttttgtggagatcctc 5247437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 16157057 - 16157101
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  16157057 tccatagacttatcattttctaggattagaaagtgtggcgtccct 16157101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 14575663 - 14575569
Alignment:
Q  116 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 211  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  14575663 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 14575569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 14578939 - 14578845
Alignment:
Q  116 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 211  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  14578939 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 14578845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 21368689 - 21368645
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||    
T  21368689 tccatagacttatcattttctaggattagaaagtgtggcatccct 21368645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 22707733 - 22707689
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||| ||||||| ||||| ||||||||||||| |||||||||    
T  22707733 tccataggcttatcagtttctaggattagaaagtgaggcgtccct 22707689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 26 - 303
Target Start/End: Complemental strand, 4788 - 4511
Alignment:
Q  26 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 125  Q
    ||||||||||||||| ||| |||||||||||  | | ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4788 ctctataaattgtaactttttctatgaaataagataagttgaatattatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggat 4689  T
Q  126 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 225  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4688 tgaaccaaccttgatcttatcaagaaatcatatttcttgcggcgatccttgcatccatagacttatcactttcttggattagaaagtgtggcatccctgt 4589  T
Q  226 ctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4588 ctatccattccatttctacattttttagtcttttcatcatttccaccaacattattcataatttgcttccgacggctc 4511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 20 - 303
Target Start/End: Original strand, 54722 - 55005
Alignment:
Q  20 caagtgctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 119  Q
    |||| |||||||||||||||||||||  ||||||||| |  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  54722 caagagctctataaattgtaagtttcattatgaaataaaggaagttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggtt 54821  T
Q  120 ctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  54822 ctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatactcgcatccatagacttatcactttcttggattagaaagtgtggcgt 54921  T
Q  220 ccctgtctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||| | ||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  54922 ccctatatatccattccatttcttcatcttttagtcttttcatcatttccatcaacattattcttaatttgcttccgacggctc 55005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 26 - 302
Target Start/End: Complemental strand, 6050419 - 6050142
Alignment:
Q  26 ctctataaattgtaagtttctctatgaaatagaaaag--gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctgg 123  Q
    ||||||||||||||| ||| ||||||||||| ||||   ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6050419 ctctataaattgtaactttttctatgaaataaaaaaaaagttgaatattatagaattttacacatatgtgtattaagagctttgtctcttgtggttctgg 6050320  T
Q  124 attgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6050319 attgaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccct 6050220  T
Q  224 gtctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggct 302  Q
    |||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  6050219 gtctatccattccatttcttcat-ttttagtcttttcaccattttcaccaacaatattcataatttgcttccgacggct 6050142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 61 - 302
Target Start/End: Original strand, 15409791 - 15410031
Alignment:
Q  61 aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatattt 160  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15409791 aggttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatattt 15409890  T
Q  161 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttc 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  15409891 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttca-tttttagtcttttc 15409989  T
Q  261 accatttccaccaacattattcataatttgcttccgacggct 302  Q
    |||||||||| ||||||||||| |||||||||||||||||||    
T  15409990 accatttccatcaacattattcttaatttgcttccgacggct 15410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 303
Target Start/End: Original strand, 33809331 - 33809611
Alignment:
Q  26 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 125  Q
    |||||||||| |||||||| ||||||||||| || | |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||| |||||    
T  33809331 ctctataaatcgtaagtttttctatgaaataaaataagttgaattttatagaattttacacatatgtgtgttgagagtcttgtctcttgtggttttggat 33809430  T
Q  126 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaa--agtgtggcgtcc 221  Q
      ||||| |||| |||||      ||||    |||||||||||||||||||||||||| | |||||||  |||||||||||| |||  ||||||||| ||    
T  33809431 caaaccatccttaatctt------aaatttcttttcttgtggcgatcctcgcatccatcggcttatcattctttcttggattggaaagagtgtggcgccc 33809524  T
Q  222 ctgtctatccattccagttcttc----attttttagtcttttcaccatttccacc--aacattattcataatttgcttccgacggctc 303  Q
     |||||||| |||||| ||||||    |||||| | |||||||||||||||||||  || | ||||| ||||||||||||||||||||    
T  33809525 ttgtctatcgattccatttcttcacttatttttgaatcttttcaccatttccaccaaaaaaatattc-taatttgcttccgacggctc 33809611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 199 - 303
Target Start/End: Complemental strand, 23732468 - 23732364
Alignment:
Q  199 ttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgac 298  Q
    ||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||||  |||||||||| ||||||| |||||||||||||||||||||    
T  23732468 ttggatttgaaagtgtggcgtccctgtctatccgttctatttcttcattttttagtctcctcaccatttcaaccaacaatattcataatttgcttccgac 23732369  T
Q  299 ggctc 303  Q
    |||||    
T  23732368 ggctc 23732364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 44792948 - 44792884
Alignment:
Q  112 ttgtggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    |||||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  44792948 ttgtggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 44792884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 44794775 - 44794819
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  44794775 tccatagacttatcattttctaggattagaaagtgtggcgtccct 44794819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 24808258 - 24808197
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  24808258 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 24808197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 31939075 - 31939114
Alignment:
Q  136 ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  31939075 ttgatcttatcaagaaaccatgtttcttgtggcgatcctc 31939114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 61 - 303
Target Start/End: Complemental strand, 15017802 - 15017560
Alignment:
Q  61 aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatattt 160  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15017802 aggttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatattt 15017703  T
Q  161 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttc 260  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  15017702 cttatggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccattccttcattttttagtcttttc 15017603  T
Q  261 accatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  15017602 accatttccaccaacaatattcataatttgcttccgacggctc 15017560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 61 - 303
Target Start/End: Complemental strand, 15019442 - 15019200
Alignment:
Q  61 aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatattt 160  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15019442 aggttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatattt 15019343  T
Q  161 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttc 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||    
T  15019342 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcatcttttagtcttctc 15019243  T
Q  261 accatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  15019242 accatttccaccaacaatattcataatttgcttccgacggctc 15019200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 20 - 303
Target Start/End: Complemental strand, 17266902 - 17266614
Alignment:
Q  20 caagtgctctataaattgtaagtttctctatgaaatagaaa---aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtg 116  Q
    |||| |||||||||||||||||||||  ||||||||| |||   | |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17266902 caagagctctataaattgtaagtttcattatgaaataaaaagagaagttgaattttgtagaattttacacatatgtgtattgagagctttgtctcttgtg 17266803  T
Q  117 gttctggattgaaccaaccttgatcttatcaagaaatcatattt-cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtg 215  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17266802 gttctggattgaaccatccttgatcttatcaagaaatcagattttcttgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtg 17266703  T
Q  216 gcgtccctgtctatccattccagttcttcatt-ttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17266702 gcgtccctgtctatccattccatttcttcatttttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 17266614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 20 - 303
Target Start/End: Original strand, 34098671 - 34098953
Alignment:
Q  20 caagtgctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 119  Q
    |||| |||||||||||||||||||||  ||||||||| | || |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  34098671 caagagctctataaattgtaagtttcattatgaaataaagaaagttgaattttatagaattttacacttatgtgtattgagaactttgtctcttgtggtt 34098770  T
Q  120 ctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgt 219  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  34098771 ctggattgaaccatccttgatcttatcaagaaattat-tttcttgtggcgatcctcgcatctatagacttatcactttattggattagaaagtgtggcgt 34098869  T
Q  220 ccctgtctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34098870 ccctgtctatccatttcatttcttcattttttagtcatttcaccatttccaccaacattattcataatttgcttccgacggctc 34098953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 66 - 303
Target Start/End: Complemental strand, 39488304 - 39488067
Alignment:
Q  66 gaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  39488304 gaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaatcatccttgatcttatcaagaaatcatatttcttgt 39488205  T
Q  166 ggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttcaccat 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||     
T  39488204 ggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtattttcaccaa 39488105  T
Q  266 ttccaccaacattattcataatttgcttccgacggctc 303  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  39488104 ttccaccaacaatattcataatttgcttccgacggctc 39488067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 63 - 302
Target Start/End: Original strand, 9167179 - 9167418
Alignment:
Q  63 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9167179 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 9167278  T
Q  163 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttcac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||     
T  9167279 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatcaatttcatttcttcattttttagtcttttcat 9167378  T
Q  263 catttccaccaacattattcataatttgcttccgacggct 302  Q
    |||||||| ||||||||||| |||||| ||||||||||||    
T  9167379 catttccatcaacattattcttaatttacttccgacggct 9167418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 17780664 - 17780859
Alignment:
Q  20 caagtgctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 119  Q
    |||| |||||||| |||||||||||||| |||||||  |  | ||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  17780664 caagagctctatatattgtaagtttctcaatgaaatgaaggaagttgaattttatacaattttacacatatgtgtattgagagctct-tctcttgtggtt 17780762  T
Q  120 ctggatt----gaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaa 210  Q
     ||||||    |||| | | ||||| |||||||||||||| |||||||||||||||||| ||||  |  | |||||||  |||||||||||||||||    
T  17780763 atggattgatcgaactatctttgattttatcaagaaatcacatttcttgtggcgatccttgcatgtaccggcttatcaatctttcttggattagaaa 17780859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 211
Target Start/End: Complemental strand, 23090998 - 23090830
Alignment:
Q  42 tttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatc 141  Q
    ||||||||||||||| || | ||| ||||||||||||||||| ||||||||||||||| |||||||||||||| |||| | ||||||| || ||||||||    
T  23090998 tttctctatgaaataaaataagttaaattttatagaattttatacatatgtgtattgatagctttgtctcttgcggttttagattgaatcatccttgatc 23090899  T
Q  142 ttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 211  Q
    ||||||| ||||  | ||||||||||||||| |   |||||| | |||||||  ||||||||||||||||||    
T  23090898 ttatcaataaattct-tttcttgtggcgatctt--tatccatcggcttatcattctttcttggattagaaag 23090830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 20265024 - 20264955
Alignment:
Q  234 tccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||| |||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20265024 tccatttcttctttttttaatcttttcaccatttccacaaacattattcataatttgcttccgacggctc 20264955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 19460135 - 19460201
Alignment:
Q  93 gtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatt 159  Q
    ||||| |||| |||||| ||||||||| || ||||||| |  |||||||||||||||||||||||||    
T  19460135 gtattaagagttttgtcccttgtggttatgaattgaactattcttgatcttatcaagaaatcatatt 19460201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 19180550 - 19180483
Alignment:
Q  109 ctcttgtggttctggattgaaccaacctt-gatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||| ||||||||||||| |||||  || ||||||||||||||| ||  ||||||||||||||||||    
T  19180550 ctcttttggttctggattggaccaaattttgatcttatcaagaaaccacgtttcttgtggcgatcctc 19180483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 11475673 - 11475714
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtc 220  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||    
T  11475673 tccatggacttatcattttctaggattagaaagtgtggcgtc 11475714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 19459912 - 19459973
Alignment:
Q  115 tggttctggattgaaccaacctt-gatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    |||||||  |||||||||| ||| |||||||| |||||| ||| ||||||||||||||||||    
T  19459912 tggttctaaattgaaccaaactttgatcttataaagaaagcatgtttcttgtggcgatcctc 19459973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 11099045 - 11099105
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcct 174  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||| |||||    
T  11099045 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcaatcct 11099105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 59 - 303
Target Start/End: Original strand, 5553462 - 5553706
Alignment:
Q  59 aaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatat 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  5553462 aaaggttgaattttatagaattttacacatatgtgtattgagagctttatctcttgtggttctggattgaaccatcattgatcttatcaagaaatcatat 5553561  T
Q  159 ttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttt 258  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5553562 ttcttgtggcgatcctcgcatacatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttt 5553661  T
Q  259 tcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||||    
T  5553662 tcatcatttccatcaacattattcttaatttgcttccgacggctc 5553706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 28 - 288
Target Start/End: Complemental strand, 17237030 - 17236774
Alignment:
Q  28 ctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattg 127  Q
    ||||| ||||||||||||| ||||||||| || | |||||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||    
T  17237030 ctatatattgtaagtttctttatgaaataaaacaagttgaattttgtagaattttacacttatgtgtatcgagagttttgtctcttgtggttctggtttg 17236931  T
Q  128 aaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtct 227  Q
    |||||       ||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| |||||||||    
T  17236930 aaccat------tcttatcaaaaaatcacatttcttgtggcgatcctcgcatcgataaacttatcactttcttggattaaaaagtgtggcatccctgtct 17236837  T
Q  228 atccattccagttcttcatt--ttttagtcttttcaccatttccaccaacattattcataatt 288  Q
     ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  17236836 gtccattccatttcttcattttttttagtcttttcaccatttccaccaacattattcataatt 17236774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 94 - 297
Target Start/End: Original strand, 22271157 - 22271364
Alignment:
Q  94 tattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatc--ctcgcatccatagacttat 191  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  22271157 tattgagagttttgtctcttgtggttctggattgaaccatcattgatcttatcaagaaatcacatttcttgtggcgatcatctcgcatccatagacttat 22271256  T
Q  192 cactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcatttttt-agtcttttcaccatttccaccaacattattcataa-ttt 289  Q
    |||||||| ||||||||||||||||||||   || ||||||||| | |||| |||||||| |||||||| ||| ||| |||||| | ||||| ||| |||    
T  22271257 cactttctgggattagaaagtgtggcgtctgagtttatccattctatttctacattttttcagtctttttaccttttacaccaaaaatattcctaatttt 22271356  T
Q  290 gcttccga 297  Q
    ||||||||    
T  22271357 gcttccga 22271364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 23433138 - 23433251
Alignment:
Q  189 tatcactttcttggattagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatt 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||| ||||    
T  23433138 tatcactttcttggattagaaagtgtggcgtccatgtctatccattccatttcttca-tttttagtcttttcaccattttcaccaacattattcagaatt 23433236  T
Q  289 tgcttccgacggctc 303  Q
    |||||||||||||||    
T  23433237 tgcttccgacggctc 23433251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 16345473 - 16345391
Alignment:
Q  16 gcaacaagtgctctataaattgtaagtttctctatgaaat--agaaaaggttgaattttatagaattttacacatatgtgtat 96  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||    
T  16345473 gcaacaagtgctctataaattgtaagtttctctatgaaataaaaaaaaagttgaattttatagaattttacacatatgtgtat 16345391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 249
Target Start/End: Complemental strand, 16019556 - 16019425
Alignment:
Q  115 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 214  Q
    ||||||||||||  |||||  |||||| |||||||||  |   |||||||||| |||||||    ||| |||||||||||||||||||||||||||||||    
T  16019556 tggttctggatttgaccaattttgatcatatcaagaatcc---tttcttgtggtgatcctcaatcccagagacttatcactttcttggattagaaagtgt 16019460  T
Q  215 ggcgtccctgtctatccattccagttcttcatttt 249  Q
     | |||||| ||| ||||||||| |||| ||||||    
T  16019459 agtgtccctttctttccattccatttctccatttt 16019425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 13179935 - 13179891
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  13179935 tccatagacttatcattttctaggattagaaagtgtggcgtccct 13179891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 13184593 - 13184549
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  13184593 tccatagacttatcattttctaggattagaaagtgtggcgtccct 13184549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 13957070 - 13956976
Alignment:
Q  116 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 211  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  13957070 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 13956976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 15381933 - 15382027
Alignment:
Q  116 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 211  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  15381933 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 15382027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 15387669 - 15387763
Alignment:
Q  116 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 211  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  15387669 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 15387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 16347198 - 16347259
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  16347198 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 16347259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 33758011 - 33757970
Alignment:
Q  182 atagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  33758011 atagacttatcattttctaggattagaaagtgtggcgtccct 33757970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 47418097 - 47418036
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  47418097 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 47418036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 13962803 - 13962709
Alignment:
Q  116 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 211  Q
    |||||||||||| | |||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  13962803 ggttctggattggatcaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 13962709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 27 - 303
Target Start/End: Complemental strand, 1065 - 790
Alignment:
Q  27 tctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggatt 126  Q
    |||||| |||||||||||| | ||||| || |||| || |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1065 tctatatattgtaagtttcacaatgaa-taaaaaaagtggaatattatagaattttacacatatgtgtattgagaactttgtctcttgtggttctggatt 967  T
Q  127 gaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtc 226  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  966 gaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctctcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtc 867  T
Q  227 tatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    ||||||||||| ||||||| | |||| ||||||||||||||||| ||||||||||| |||||| |||||||||||||    
T  866 tatccattccatttcttcaatctttattcttttcaccatttccatcaacattattcttaattttcttccgacggctc 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 20 - 303
Target Start/End: Original strand, 33166 - 33451
Alignment:
Q  20 caagtgctctataaattgtaagtttctctatgaaatagaaa---aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtg 116  Q
    |||| |||||||||||||||||||||  ||||||||| |||   | |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33166 caagagctctataaattgtaagtttcattatgaaataaaaagagaagttgaattttgtagaattttacacatatgtgtattgagagctttgtctcttgtg 33265  T
Q  117 gttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtgg 216  Q
    |||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33266 gttctggattgaaccatccttgatcttatcaagaaattat-tttcttgtggcgatcctcgcatccatagacttatcaatttcttggattagaaagtgtgg 33364  T
Q  217 cgtccctgtctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||||||||| |||||||  |||||||||||| ||||||||||||    
T  33365 cgtccctgtctatcaattccatttcttcattttctagtcttttcaccatttctaccaacaaaattcataatttgtttccgacggctc 33451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 200; Significance: 1e-109; HSPs: 3)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 28 - 303
Target Start/End: Original strand, 6576 - 6849
Alignment:
Q  28 ctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattg 127  Q
    ||||| ||||||||||||| ||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  6576 ctatatattgtaagtttctttatgaaataaacaag-ttgaattttatagaattttacacttatgtgtattgagagctttgtctcttgtggttttggattg 6674  T
Q  128 aaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtct 227  Q
    |||||  ||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6675 aaccattcttgatcttatcaagaattttt-tttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtct 6773  T
Q  228 atccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctc 303  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  6774 atccattccatttcttcattttctagtcttttcaccatttccaccaacattcttcttaatttgcttccgacggctc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 28 - 299
Target Start/End: Original strand, 9471 - 9740
Alignment:
Q  28 ctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattg 127  Q
    ||||| ||| ||||||||| ||||||||| | ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9471 ctatatattttaagtttctttatgaaataaacaag-ttgaatttgatagaattttacacttatgtgtattgagagctttgtctcttgtggttctggattg 9569  T
Q  128 aaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtct 227  Q
    |||||  |||| |||||||||||| |  | |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  9570 aaccattcttgttcttatcaagaatttct-tttcttgtggggatcctcgcatccaccgacttatcactttcttggattagaaagtgtggtgtccctgtct 9668  T
Q  228 atccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacg 299  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9669 atccattccatatcttcattttctagtcttttcaccatttccaccaacattattcttaatttgcttccgacg 9740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 28 - 299
Target Start/End: Original strand, 17138 - 17407
Alignment:
Q  28 ctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattg 127  Q
    ||||| ||| ||||||||| ||||||||| | ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17138 ctatatattttaagtttctttatgaaataaacaag-ttgaatttgatagaattttacacttatgtgtattgagagctttgtctcttgtggttctggattg 17236  T
Q  128 aaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtct 227  Q
    |||||  |||| |||||||||||| |  | |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  17237 aaccattcttgttcttatcaagaatttct-tttcttgtggggatcctcgcatccaccgacttatcactttcttggattagaaagtgtggtgtccctgtct 17335  T
Q  228 atccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacg 299  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17336 atccattccatatcttcattttctagtcttttcaccatttccaccaacattattcttaatttgcttccgacg 17407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 261
Target Start/End: Complemental strand, 25966 - 25720
Alignment:
Q  16 gcaacaagtgctctataaattgtaagtttctctatgaaatagaaa-aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttg 114  Q
    ||||||||| |||||||||||||||||||   ||||||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25966 gcaacaagtactctataaattgtaagttttattatgaaataaaaagaagttgaattttatagaattttacacatatgtgtagtgagagctttgtctcttg 25867  T
Q  115 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25866 tagttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatatacttatcactttcttggattagaaagtgt 25767  T
Q  215 ggcgtccctgtctatccattccagttcttcattttttagtcttttca 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  25766 ggcgtccctgtctatccattccatttcttcattttttagtcttttca 25720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 105 - 302
Target Start/End: Complemental strand, 22730 - 22534
Alignment:
Q  105 ttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggat 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22730 ttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggat 22631  T
Q  205 tagaaagtgtggcgtccctgtctatccattccagttcttcattttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggct 302  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  22630 tagaaagtgtggcgtccctgtctatccattccatttcttcat-ttttagtcttttcaccatttccatcaacattattcttaatttgcttccgacggct 22534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 1560 - 1490
Alignment:
Q  63 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaa 133  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  1560 gttgaattttatagaattttacacttatgtgtattgagagctttgtctcttatggttctggattgaaccaa 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 2155 - 2199
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  2155 tccatagacttatcattttctaggattagaaagtgtggcgtccct 2199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 8812 - 8768
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  8812 tccatagacttatcattttctaggattagaaagtgtggcgtccct 8768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 33824 - 33780
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  33824 tccatagacttatcattttctaggattagaaagtgtggcgtccct 33780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 288993 - 289037
Alignment:
Q  179 tccatagacttatcactttcttggattagaaagtgtggcgtccct 223  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  288993 tccatagacttatcattttctaggattagaaagtgtggcgtccct 289037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 24372 - 24311
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  24372 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 24311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 10911 - 10850
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  10911 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 10850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 6465 - 6526
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  6465 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 6526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 202 - 141
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  202 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 374851 - 374790
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  374851 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 374790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 55425 - 55486
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||| ||||||||| ||  ||||||||||||||||||    
T  55425 tggttctggattgaaccatgcattgatctcatcaagaaaccacgtttcttgtggcgatcctc 55486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 241614 - 241675
Alignment:
Q  115 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 175  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  |||||||||| |||||||    
T  241614 tggttctggattgaaccatgcgttgatcttatcaagaaaccacgtttcttgtggtgatcctc 241675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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