View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6550_low_22 (Length: 243)
Name: NF6550_low_22
Description: NF6550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6550_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 9617623 - 9617526
Alignment:
| Q |
20 |
acgtaaactccacaaatggagaatcacaagtgtttcgcaggaggagaaaatggtaggcggcaaaggggggaagcctaatactaacgttagacggagatc |
118 |
Q |
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| T |
9617623 |
acgtaaactcca-aaatggagaatcacaagtgtttcgcaggaggagaaaatggtaggcggcaaaggggagaagcctaatactaacgctagacggagatc |
9617526 |
T |
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