View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6550_low_23 (Length: 238)

Name: NF6550_low_23
Description: NF6550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6550_low_23
NF6550_low_23
[»] chr6 (47 HSPs)
chr6 (1-190)||(25580373-25580562)
chr6 (1-190)||(26143519-26143708)
chr6 (1-190)||(25483710-25483899)
chr6 (1-190)||(25539194-25539383)
chr6 (1-190)||(26056573-26056762)
chr6 (1-190)||(26076543-26076732)
chr6 (1-190)||(26656616-26656805)
chr6 (1-190)||(26762587-26762776)
chr6 (7-190)||(26862231-26862414)
chr6 (1-190)||(26647130-26647319)
chr6 (1-190)||(26753098-26753287)
chr6 (4-190)||(27337440-27337626)
chr6 (4-190)||(27398180-27398366)
chr6 (1-190)||(26884721-26884910)
chr6 (13-190)||(25492673-25492850)
chr6 (24-190)||(27215103-27215269)
chr6 (13-190)||(27530655-27530832)
chr6 (27-190)||(28786889-28787052)
chr6 (27-190)||(28793010-28793173)
chr6 (27-190)||(27717867-27718030)
chr6 (4-185)||(27705749-27705930)
chr6 (4-188)||(26623924-26624108)
chr6 (4-188)||(26729901-26730085)
chr6 (27-190)||(27610488-27610651)
chr6 (27-190)||(28781752-28781915)
chr6 (4-185)||(26803102-26803283)
chr6 (12-185)||(27426965-27427138)
chr6 (1-93)||(25511640-25511732)
chr6 (27-178)||(27604072-27604223)
chr6 (12-190)||(26824470-26824648)
chr6 (4-190)||(27697931-27698117)
chr6 (4-190)||(31285210-31285396)
chr6 (27-185)||(27592389-27592547)
chr6 (27-185)||(27676988-27677146)
chr6 (4-185)||(27679606-27679787)
chr6 (139-190)||(25511589-25511640)
chr6 (4-81)||(28140295-28140372)
chr6 (4-80)||(26937790-26937866)
chr6 (4-73)||(28097788-28097857)
chr6 (27-92)||(26849461-26849526)
chr6 (10-98)||(28243538-28243626)
chr6 (10-73)||(28227720-28227783)
chr6 (10-73)||(28235333-28235396)
chr6 (4-98)||(28297085-28297179)
chr6 (4-98)||(28514894-28514988)
chr6 (27-92)||(26975700-26975765)
chr6 (10-82)||(29843338-29843410)
[»] chr1 (3 HSPs)
chr1 (13-188)||(28163729-28163904)
chr1 (13-190)||(28127029-28127206)
chr1 (4-190)||(267685-267871)
[»] scaffold0419 (1 HSPs)
scaffold0419 (27-190)||(8138-8301)
[»] scaffold0277 (2 HSPs)
scaffold0277 (27-190)||(13043-13206)
scaffold0277 (27-190)||(4080-4243)
[»] chr4 (7 HSPs)
chr4 (27-190)||(18698764-18698927)
chr4 (27-190)||(18678924-18679087)
chr4 (27-185)||(18723449-18723607)
chr4 (12-185)||(18074417-18074590)
chr4 (27-185)||(18654841-18654999)
chr4 (27-185)||(18730868-18731026)
chr4 (11-98)||(5090305-5090392)
[»] scaffold0349 (1 HSPs)
scaffold0349 (27-190)||(2907-3070)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-185)||(60225-60398)
[»] chr8 (1 HSPs)
chr8 (4-190)||(29273183-29273369)
[»] chr2 (1 HSPs)
chr2 (4-90)||(3280410-3280496)
[»] chr5 (1 HSPs)
chr5 (9-90)||(16691618-16691699)
[»] scaffold0038 (3 HSPs)
scaffold0038 (10-98)||(43700-43788)
scaffold0038 (10-73)||(28218-28281)
scaffold0038 (10-73)||(35495-35558)


Alignment Details
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 25580562 - 25580373
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25580562 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 25580463  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25580462 gtcctaccatgtggaccacatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 25580373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 26143708 - 26143519
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26143708 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccaaaaa 26143609  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26143608 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttcttctattcgggactgtaatccaacagggtatttgg 26143519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 25483899 - 25483710
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  25483899 ctgacattatgaagaaaacatacaccttcaaattgatcagcaagaaaattaaaaactgcttttgcaagtgttgatttacccatgcctccagtaccaaaaa 25483800  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25483799 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 25483710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 25539383 - 25539194
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25539383 ctgacattatgaagaaaacatacaacttcaaattgatcagcaacaaaattaaaaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 25539284  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25539283 gtcctaccatgcggacctcatcctcagagcccaagtcaagaagcaatttcacttgttctattggggactgtaatccaacagggtatttgg 25539194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 26056762 - 26056573
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| |||||| |||    
T  26056762 ctgacattatgaagaaaacatacaccttcaaattgatcagcaatagaattaaaaactgcttttgcaagtgttgatttacccatgcctccggtaccaaaaa 26056663  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26056662 ttcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgcaatccaacagggtatttgg 26056573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 26076732 - 26076543
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| |||||| |||    
T  26076732 ctgacattatgaagaaaacatacaccttcaaattgatcagcaatagaattaaaaactgcttttgcaagtgttgatttacccatgcctccggtaccaaaaa 26076633  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26076632 ttcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgcaatccaacagggtatttgg 26076543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 26656805 - 26656616
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  26656805 ctgacattgtgaagaaaacatacaccttcaaattgatcagcgacaaaattataaattgctttggcaagtgttgatttacccatgcctccagtaccataaa 26656706  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||||||||||| | |||||||||| ||| ||| | |||||||||||||||||||||| || ||| |||| ||||||||||||||||||||    
T  26656705 gtcctaccatgagaacctcatccttagatcccttatcaagaagcaatttcacttgttgtactcgagactctaatccaacagggtatttgg 26656616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 26762776 - 26762587
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  26762776 ctgacattgtgaagaaaacatacaccttcaaattgatcagcgacaaaattataaattgctttggcaagtgttgatttacccatgcctccagtaccataaa 26762677  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||||||||||| | |||||||||| ||| ||| | |||||||||||||||||||||| || ||| |||| ||||||||||||||||||||    
T  26762676 gtcctaccatgagaacctcatccttagatcccttatcaagaagcaatttcacttgttgtactcgagactctaatccaacagggtatttgg 26762587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 7 - 190
Target Start/End: Complemental strand, 26862414 - 26862231
Alignment:
Q  7 ttatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtccta 106  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26862414 ttatgaagaaaacatacaccttcaaattgatcggcaacaaaattataaattgcttttgcaagtgttgatttccccatgcctccagtaccataaagtccta 26862315  T
Q  107 ccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||||| | ||| | || |||||  |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  26862314 ccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggtatttgg 26862231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 26647319 - 26647130
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||  ||||||||||||||||    
T  26647319 ctgacattatgaagaaagcatacaccttcaaattgatcagcaacaaaattataaatcgctttggcaagtgttgatttacccaaacctccagtaccataaa 26647220  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||||||||||  ||||| | || |||||  |  | ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  26647219 gtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatcgggactctaatccaacagggtatttgg 26647130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 26753287 - 26753098
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||  ||||||||||||||||    
T  26753287 ctgacattatgaagaaagcatacaccttcaaattgatcagcaacaaaattataaatcgctttggcaagtgttgatttacccaaacctccagtaccataaa 26753188  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||||||||||  ||||| | || |||||  |  | ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  26753187 gtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatcgggactctaatccaacagggtatttgg 26753098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 27337440 - 27337626
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    |||||||||||||| ||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  27337440 acattatgaagaaagcatactccttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgattttcccaagcctctagtaccataaagtc 27337539  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||||||||  |||| | || |||||  ||   |||||||||||||| ||||||| || |||||||||||||||||||||||||||||    
T  27337540 ctaccatgttgaccccttcatcagattcctcatcaagaagcaattttacttgttgtactcgggactgtaatccaacagggtatttgg 27337626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 27398180 - 27398366
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    |||||||||||||| ||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  27398180 acattatgaagaaagcatactccttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgattttcccaagcctctagtaccataaagtc 27398279  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||||||||  |||| | || |||||  ||   |||||||||||||| ||||||| || |||||||||||||||||||||||||||||    
T  27398280 ctaccatgttgaccccttcatcagattcctcatcaagaagcaattttacttgttgtactcgggactgtaatccaacagggtatttgg 27398366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 26884910 - 26884721
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaa 100  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  26884910 ctgactttatgcagaaaacatacacattcaaattgatcagcaacataattataaattgcttttgcaagtgttgatttacccaagcctccagtaccataaa 26884811  T
Q  101 gtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
     |||||||||| | ||| | || | |||  || | |||||||||||||| | ||||| || |||| ||||||||||||||||||||||||    
T  26884810 ttcctaccatgtgtaccccttcgttagattccttatcaagaagcaattttaattgttgtactcggtactgtaatccaacagggtatttgg 26884721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 25492673 - 25492850
Alignment:
Q  13 agaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgc 112  Q
    |||||||||| ||||||||||||||||||||  || ||||| | || ||||||||||||||||||||| | ||||||||||||||||||||||||||||     
T  25492673 agaaaacataaaccttcaaattgatcagcaatgaagttatagattgattttgcaagtgttgatttacctaagcctccagtaccataaagtcctaccatgt 25492772  T
Q  113 ggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    ||| ||||||||||||  ||   || |||||||||||||| |||| || |||||| ||||||||||||||||||||||    
T  25492773 ggaactcatcctcagatacctcatctagaagcaatttcacgtgttgtactcgggattgtaatccaacagggtatttgg 25492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 27215269 - 27215103
Alignment:
Q  24 accttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcc 123  Q
    ||||||||| ||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||  |||| ||||||||||||| ||||||| |||    
T  27215269 accttcaaactgatcagcaatgaaattaaaaattgcttttgcaagtgttgatttacccatgcctccagctccatgaagtcctaccatgtggacctcttcc 27215170  T
Q  124 tcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    | ||| ||| |||||||||||||||| ||||||| |||| |||  |||||||||||||||| |||||    
T  27215169 ttagatcccttgtcaagaagcaattttacttgttgtatttgggtatgtaatccaacagggtgtttgg 27215103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 27530655 - 27530832
Alignment:
Q  13 agaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgc 112  Q
    |||||||||| | ||||||||||||||||||  |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  27530655 agaaaacataaaacttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgatttacctatgcctccagtaccataaagtcctaccatgt 27530754  T
Q  113 ggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    |||||||||| |||||       |||||| ||  |||||| |||| || ||||||||||||||||||||| |||||||    
T  27530755 ggacctcatcatcagatttttcatcaagatgccctttcacatgttgtactcgggactgtaatccaacaggatatttgg 27530832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 27 - 190
Target Start/End: Complemental strand, 28787052 - 28786889
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    |||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||    
T  28787052 ttcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgcggactccatcatca 28786953  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    || ||    ||||||||| |||||||||||| || ||| ||||| |||||||||||||| ||||    
T  28786952 gatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattgg 28786889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 27 - 190
Target Start/End: Complemental strand, 28793173 - 28793010
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    |||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||    
T  28793173 ttcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgcggactccatcatca 28793074  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    || ||    ||||||||| |||||||||||| || ||| ||||| |||||||||||||| ||||    
T  28793073 gatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattgg 28793010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 27717867 - 27718030
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||| |||    
T  27717867 ttcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatca 27717966  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    || |     ||||||||| |||||||||||| || ||| ||||| |||||||||||||| ||||    
T  27717967 gatctttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattgg 27718030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 27705749 - 27705930
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| | ||| ||| ||    
T  27705749 acatcatgaagaaaacataaaccttcaaattgatcagcaacaaaattataaattgctcttgcaagtgttgatttacccaagcctccaatgccaaaaattc 27705848  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
    | |||||  ||||| |||| ||||  |||   ||||||||  |||||||||||| || ||| ||||| ||||||||||||||    
T  27705849 caaccatatggaccccatcatcaggtccctcatcaagaagtgatttcacttgttgtactcgagactgcaatccaacagggta 27705930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 26624108 - 26623924
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||| | |||| |||||||||||||||| |||| ||||||| | ||||| | ||    
T  26624108 acatcatgaagaaaacataaaccttcaaattgatcagcaacaaagttatagattgctcttgcaagtgttgatttgcccaagcctccaatcccatacattc 26624009  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtattt 188  Q
    | |||||  ||||| |||| ||||| ||  | ||||||||  |||||||||||| || | | |||||||||||||||||||||||    
T  26624008 caaccatatggaccccatcatcagatccattatcaagaagtgatttcacttgttgtagttgagactgtaatccaacagggtattt 26623924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 26730085 - 26729901
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||| | |||| |||||||||||||||| |||| ||||||| | ||||| | ||    
T  26730085 acatcatgaagaaaacataaaccttcaaattgatcagcaacaaagttatagattgctcttgcaagtgttgatttgcccaagcctccaatcccatacattc 26729986  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtattt 188  Q
    | |||||  ||||| |||| ||||| ||  | ||||||||  |||||||||||| || | | |||||||||||||||||||||||    
T  26729985 caaccatatggaccccatcatcagatccattatcaagaagtgatttcacttgttgtagttgagactgtaatccaacagggtattt 26729901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 27610488 - 27610651
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||| |||    
T  27610488 ttcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatca 27610587  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    || |     ||||||||| ||||||||| || || | | ||||| |||||||||||||| ||||    
T  27610588 gatctttcatcaagaagcgatttcacttcttgtacttgagactgcaatccaacagggtaattgg 27610651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 190
Target Start/End: Complemental strand, 28781915 - 28781752
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    |||||||||||||||||  || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| | |||  |||  |||    
T  28781915 ttcaaattgatcagcaattaagttataaactgcttttacaagtgttgatttacccaagcctccagtaccataaagtcctaccatcctgactccattatca 28781816  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
     | ||     |||||||| |||||||||||| || |||||||||||||||||||||||| ||||    
T  28781815 tatccttcaccaagaagcgatttcacttgttgtactcgggactgtaatccaacagggtaattgg 28781752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 26803283 - 26803102
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||| ||||||| | ||||||| ||    
T  26803283 acatcatgaagaaaacataaaccttcaaattgatcagcaacaaaattatagattgctcttgcaagtgctgatttacccaagcctccaatcccataaattc 26803184  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
    | |||||  ||||| |||| ||||  |||   ||||||||| ||||||||| || || ||| || || ||||||||||||||    
T  26803183 caaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttcttgtactcgagagtgcaatccaacagggta 26803102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 27426965 - 27427138
Alignment:
Q  12 aagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatg 111  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||||||||   ||||||| | ||||||| ||| |||||     
T  27426965 aagaaaacataaaccttcaaattgatcagcaacaaaattatagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccata 27427064  T
Q  112 cggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
     ||||| |||| ||||  |||   ||||||||| |||||||||||| || ||| ||||| ||||||||||||||    
T  27427065 tggaccccatcatcaggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggta 27427138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 25511732 - 25511640
Alignment:
Q  1 ctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagta 93  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  25511732 ctgacattatgaagaaaacatacactttcaaattgatcagcaatagaattaaaaactgcttttgcaagtgttgatttacccatgcctctagta 25511640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 27604072 - 27604223
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||| |||    
T  27604072 ttcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatca 27604171  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaa 178  Q
    || |     ||||||||  |||||||||||| || ||| ||||| |||||||    
T  27604172 gatctttcatcaagaagagatttcacttgttgtactcgagactgcaatccaa 27604223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 26824648 - 26824470
Alignment:
Q  12 aagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatg 111  Q
    ||||||||| | | ||||||||| |||||||| | ||||| ||  |||||||||||||||||||||||| |  |||||| |||| ||||||||||||||     
T  26824648 aagaaaacaaaaaacttcaaatttatcagcaatagaattaaaagttgcttttgcaagtgttgatttacctaaacctccaataccgtaaagtcctaccata 26824549  T
Q  112 cggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
     ||||| |||| |||||  |  | ||||||||  |||||||||||| || |||||||||||||||||| ||||||||||    
T  26824548 tggaccacatcatcagattcgttatcaagaagagatttcacttgttgtactcgggactgtaatccaaccgggtatttgg 26824470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 27697931 - 27698117
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||| | |||| |||||||||||||||| |||| ||||||| | ||| ||| ||    
T  27697931 acattatgaagaaaacataaaccttcaaattgatcagcaaccaaattatagattgctcttgcaagtgttgattttcccaagcctccaatcccaaaaattc 27698030  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    | |||||  ||||| |||| ||||| ||  | |||||||   ||||||||  || || | | |||||||||||||||||||| ||||    
T  27698031 caaccatatggaccccatcatcagatccattatcaagaattgatttcactctttgtacttgagactgtaatccaacagggtaattgg 27698117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 31285396 - 31285210
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    |||| ||||||||||||||  || |||||||||||| ||| ||||||||| | |||| ||||||||||||||||||||| ||||||  | ||||||||||    
T  31285396 acatcatgaagaaaacataatccgtcaaattgatcaccaataaaattatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtc 31285297  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    |||||||| | ||| | |  | ||   || | |||||||||||||||||||||| ||||||  |||  |||||||||||||| ||||    
T  31285296 ctaccatgtgtacccctttattagtttccttatcaagaagcaatttcacttgttgtattcgaaacttaaatccaacagggtaattgg 31285210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 185
Target Start/End: Original strand, 27592389 - 27592547
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| ||| ||||||| |||||| |||||||||||||| |||| ||||||| | ||||||| ||| |||||  ||||| |||  |||    
T  27592389 ttcaaattgatcagcaataaagttataaattgctttcgcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatca 27592488  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
    || ||    ||||||||| |||||||||||| || ||| ||||| ||||||||||||||    
T  27592489 gatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggta 27592547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 185
Target Start/End: Original strand, 27676988 - 27677146
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||| ||||||| | ||||||| ||| |||||  ||||| |||  |||    
T  27676988 ttcaaattgatcagcaataaaattataaattgctttcgcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatca 27677087  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
    || ||    ||||||||| |||||| ||||| || ||| ||||| ||||||||||||||    
T  27677088 gatccttcatcaagaagcgatttcatttgttgtactcgagactgcaatccaacagggta 27677146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 27679787 - 27679606
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    |||| |||||||||||||  |||||| |||||||| |||||||||||||| | |  | |||||||||||||||| ||||  |||||| | ||||||| ||    
T  27679787 acatcatgaagaaaacatgaaccttcgaattgatctgcaacaaaattatagatttgtcttgcaagtgttgatttccccaaacctccaatgccataaattc 27679688  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
    | |||||  ||||| |||| || || |||   ||||||||| |||||||||||| || ||| ||||| ||||||||||||||    
T  27679687 caaccatatggaccccatcatcggatccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggta 27679606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 25511640 - 25511589
Alignment:
Q  139 agaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25511640 agaagcaatttcacttgttctattcgggactgcaatccaacagggtatttgg 25511589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 28140372 - 28140295
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc 81  Q
    ||||||||||||||||| | || |||||||||||| |||| ||||||||||| ||||| ||||||||||| |||||||    
T  28140372 acattatgaagaaaacacaaacattcaaattgatcggcaataaaattataaattgcttgtgcaagtgttgttttaccc 28140295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 26937866 - 26937790
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacc 80  Q
    ||||||||||||||||| | || ||||||||||||| |||  |||||||||| ||||  ||||||||||||||||||    
T  26937866 acattatgaagaaaacacaaactttcaaattgatcaccaatcaaattataaattgctcgtgcaagtgttgatttacc 26937790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 28097788 - 28097857
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttg 73  Q
    ||||| ||||| ||||| |||| |||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  28097788 acattgtgaaggaaacagacacattcaaattgaccagcaatgaaattataaaccgcttttgcaagtgttg 28097857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 26849526 - 26849461
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagt 92  Q
    |||||||||||||||||   |||||||||||||||  |||||||||| ||| ||||| ||||||||    
T  26849526 ttcaaattgatcagcaatcgaattataaactgcttgagcaagtgttgtttttcccattcctccagt 26849461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 28243626 - 28243538
Alignment:
Q  10 tgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccata 98  Q
    ||||||||||||| ||  |||||||||||||| |   |||||||||||||| ||||||||||||  || ||||| || ||||| |||||    
T  28243626 tgaagaaaacataaacaatcaaattgatcagctatggaattataaactgctcttgcaagtgttgtctttcccattccaccagtcccata 28243538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 28227783 - 28227720
Alignment:
Q  10 tgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttg 73  Q
    ||||||||||| | ||| ||||||||||| || | |||||||||||||||  ||||||||||||    
T  28227783 tgaagaaaacacaaaccatcaaattgatcggctataaaattataaactgcccttgcaagtgttg 28227720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 28235396 - 28235333
Alignment:
Q  10 tgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttg 73  Q
    ||||||||||| | ||| |||||||||||||| |   |||||||||||||| ||||||||||||    
T  28235396 tgaagaaaacacaaaccatcaaattgatcagctatggaattataaactgctcttgcaagtgttg 28235333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 28297085 - 28297179
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccata 98  Q
    ||||| ||||||||||| | ||| ||||||||||| || |   |||||||||||||| | ||||||||||  || ||||| |||||||| |||||    
T  28297085 acattgtgaagaaaacacaaaccatcaaattgatcggctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccata 28297179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 28514988 - 28514894
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccata 98  Q
    ||||| ||||||||||| | ||| ||||||||||| || |   |||||||||||||| | ||||||||||  || ||||| |||||||| |||||    
T  28514988 acattgtgaagaaaacacaaaccatcaaattgatcggctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccata 28514894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 26975765 - 26975700
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagt 92  Q
    ||||||||||| |||||  ||||||||||||||||  ||||||||||  |||||||| || |||||    
T  26975765 ttcaaattgattagcaatcaaattataaactgcttgagcaagtgttgtcttacccattcccccagt 26975700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 29843338 - 29843410
Alignment:
Q  10 tgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccca 82  Q
    ||||||||||| | || |||||||| ||||||||  |||||||||| ||||   |||||||||| ||||||||    
T  29843338 tgaagaaaacacaaacattcaaatttatcagcaatcaaattataaattgctcgagcaagtgttgttttaccca 29843410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 28163729 - 28163904
Alignment:
Q  13 agaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgc 112  Q
    |||||||||| ||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||     
T  28163729 agaaaacataaaccttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgatttacccaagcctccagtatcataaagtcctaccatgt 28163828  T
Q  113 ggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtattt 188  Q
    |||||||||| ||| | ||| | || ||||||||||||||||||| || | | || |||||||||||||| |||||    
T  28163829 ggacctcatcatcatatcccttatcgagaagcaatttcacttgttgtacttgagattgtaatccaacaggatattt 28163904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 28127029 - 28127206
Alignment:
Q  13 agaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgc 112  Q
    |||||||||| ||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||     
T  28127029 agaaaacataaaccttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgatttacccaagcctccaataccataaagtcctaccatgt 28127128  T
Q  113 ggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    |||||||||| ||| | ||| | || |||||||| |||||||||| || | ||  ||||||||||||||| |||||||    
T  28127129 ggacctcatcatcatatcccttatcgagaagcaaattcacttgttgtacttggtcctgtaatccaacaggatatttgg 28127206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 267685 - 267871
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    |||| ||||||||||||||  ||||||||||||||||||| ||||||||| | |||| ||||||| ||||||||||||| ||||||| | ||||||| ||    
T  267685 acatcatgaagaaaacataatccttcaaattgatcagcaataaaattatagattgctcttgcaagggttgatttacccaagcctccaatcccataaattc 267784  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    | |||||  ||||| |||| ||||| ||  | |||||||||||||||||||||| || | | |||  ||||||||||||||| ||||    
T  267785 caaccatatggaccccatcatcagatccattatcaagaagcaatttcacttgttgtacttgagaccataatccaacagggtaattgg 267871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 190
Target Start/End: Complemental strand, 8301 - 8138
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    |||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||  |||| |||    
T  8301 ttcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtggactccatcatca 8202  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    || ||    ||||||||| ||||||| |||| || ||| |||||||||||||||||||| ||||    
T  8201 gatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattgg 8138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 13043 - 13206
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    |||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||  |||| |||    
T  13043 ttcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtggactccatcatca 13142  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    || ||    ||||||||| ||||||| |||| || ||| |||||||||||||||||||| ||||    
T  13143 gatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattgg 13206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 4080 - 4243
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    |||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || |  |||  |||    
T  4080 ttcaaattcatcagcaataaaattataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtgggctccatgatca 4179  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    || ||    ||||||||| ||||||| |||| || ||| |||||||||||||||||||| ||||    
T  4180 gatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattgg 4243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 18698764 - 18698927
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||| |||||||||  |||| |||    
T  18698764 ttcaaattgatcagcaataaaattataaattgctttcgcaagtgttgatttacccatgcctccaatgccataaagtcctaacatgcggactccatcatca 18698863  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    || ||  | |||||||||  ||||||||||| || ||| ||||| |||||||||||||| ||||    
T  18698864 gatcctttatcaagaagcgctttcacttgttgtactcgagactgcaatccaacagggtaattgg 18698927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 18678924 - 18679087
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||  |||| | |    
T  18678924 ttcaaattgatcagcaataaaattataaattgcttttgcaagtgttaatttacccatgcctccaatgccataaagtcctaccatgcggactccatcataa 18679023  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    || |     ||||||||| |||||||||||| || ||| ||||| |||||||||||||| ||||    
T  18679024 gatcattcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattgg 18679087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 185
Target Start/End: Original strand, 18723449 - 18723607
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||  || | | |    
T  18723449 ttcaaattgatcagcaataaaattataaattccttttgcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccatta 18723548  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
    || ||  | ||||||||| |||||||||||| || ||| ||||| || |||||||||||    
T  18723549 gatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggta 18723607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 18074590 - 18074417
Alignment:
Q  12 aagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatg 111  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||||||||   ||||||| | ||||||| ||| |||||     
T  18074590 aagaaaacataaaccttcaaattgatcagcaacaaaattatagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccata 18074491  T
Q  112 cggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
     ||||| |||| ||||  |||   ||||||||| |||||||||||| || ||| ||||| ||||||||||||||    
T  18074490 tggaccccatcatcaggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggta 18074417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 185
Target Start/End: Original strand, 18654841 - 18654999
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| | |||||| || || |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||  || | |||    
T  18654841 ttcaaattgatcagcaatacaattattaattgattttgcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccatca 18654940  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
    || ||  | ||||||||| |||||||||||| || ||| ||||| || |||||||||||    
T  18654941 gatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggta 18654999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 185
Target Start/End: Original strand, 18730868 - 18731026
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| ||||||||||| | |||| |||||||||||||| |||||||||||| ||||||||||||||| |||||||||  || | | |    
T  18730868 ttcaaattgatcagcaataaaattataaattactttagcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccataa 18730967  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
    || ||  | ||||||||| |||||||||||| || ||| ||||| || |||||||||||    
T  18730968 gatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggta 18731026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 5090305 - 5090392
Alignment:
Q  11 gaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccata 98  Q
    |||||||||| | || ||||||||||| |||||  ||||| |||| ||||||| ||||||| | ||||||||| |||||||| |||||    
T  5090305 gaagaaaacaaagacattcaaattgatgagcaatgaaattgtaaattgcttttccaagtgtggttttacccattcctccagtcccata 5090392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 2907 - 3070
Alignment:
Q  27 ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca 126  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||| |||    
T  2907 ttcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatca 3006  T
Q  127 gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    || |     ||||||||| |||||||||||| || ||| ||||  | |||||||||||| ||||    
T  3007 gatctttcatcaagaagcgatttcacttgttgtactcgagacttcattccaacagggtaattgg 3070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 60398 - 60225
Alignment:
Q  12 aagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatg 111  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||||||||   ||||||| | ||||||| ||| |||||     
T  60398 aagaaaacataaaccttcaaattgatcagcaacaaaattatagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccata 60299  T
Q  112 cggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta 185  Q
     ||||| |||| ||||  |||   ||||||||| |||||||||||| || ||| ||||| ||||||||||||||    
T  60298 tggaccccatcatcaggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggta 60225  T

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Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 29273183 - 29273369
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtc 103  Q
    |||| |||||||||||||| | |||||||||||||||||| ||||||||| | |||| ||||||| ||||||||||||| ||| ||| | ||||||| ||    
T  29273183 acatcatgaagaaaacataaatcttcaaattgatcagcaaaaaaattatagattgctcttgcaagggttgatttacccaagccaccaatcccataaattc 29273282  T
Q  104 ctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg 190  Q
    | |||||  ||| | |||| ||||| ||  | ||||||||| |||| ||||||| || | | |||||||||||||||||||||||||    
T  29273283 caaccatatggatcccatcatcagatccattatcaagaagcgatttgacttgttgtacttgagactgtaatccaacagggtatttgg 29273369  T

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Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 3280496 - 3280410
Alignment:
Q  4 acattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca 90  Q
    ||||| |||||||||||||||| ||||||||||| |||||  ||||||||||||||| ||||||| ||||  |||||||| ||||||    
T  3280496 acattgtgaagaaaacatacacattcaaattgattagcaatgaaattataaactgctcttgcaagagttgtcttacccattcctcca 3280410  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 16691699 - 16691618
Alignment:
Q  9 atgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca 90  Q
    |||||||||||| | || |||||||||||||||||  |||||||||| ||||   |||||||||| |||||| || ||||||    
T  16691699 atgaagaaaacacaaacattcaaattgatcagcaatcaaattataaattgctcgagcaagtgttgttttaccgattcctcca 16691618  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 43788 - 43700
Alignment:
Q  10 tgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccata 98  Q
    ||||||||||||| ||  |||||||||||||| |   |||||||||||||| ||||||||||||  || ||||| || ||||| |||||    
T  43788 tgaagaaaacataaacaatcaaattgatcagctatggaattataaactgctcttgcaagtgttgtctttcccattccaccagtcccata 43700  T

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Target: scaffold0038; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 28281 - 28218
Alignment:
Q  10 tgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttg 73  Q
    ||||||||||| | ||| ||||||||||| || | |||||||||||||||  ||||||||||||    
T  28281 tgaagaaaacacaaaccatcaaattgatcggctataaaattataaactgcccttgcaagtgttg 28218  T

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Target: scaffold0038; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 35558 - 35495
Alignment:
Q  10 tgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttg 73  Q
    ||||||||||| | ||| |||||||||||||| |   |||||||||||||| ||||||||||||    
T  35558 tgaagaaaacacaaaccatcaaattgatcagctatggaattataaactgctcttgcaagtgttg 35495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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