View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6552_high_17 (Length: 250)
Name: NF6552_high_17
Description: NF6552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6552_high_17 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 3172199 - 3171958
Alignment:
| Q |
1 |
attattaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3172199 |
attattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgc |
3172100 |
T |
|
| Q |
101 |
aagagaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
3172099 |
aagagaaagtgttgaaccatccttcaattggcggattcttgactcactgcggatggaactcaaccacggaaagtgtatgtgctggaatgccaatgttgtg |
3172000 |
T |
|
| Q |
201 |
taggccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3171999 |
taggccattttttgctgatcaaccacctaacagtagaattat |
3171958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 4481151 - 4480910
Alignment:
| Q |
1 |
attattaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgc |
100 |
Q |
| |
|
||||||||| || |||||||||||||||||||||| || |||||||| |||| | |||| ||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
4481151 |
attattaggtctaatcttgtcattggtggctcagtggtgttgtcatctgagtatttgaaagaaatttcaaatagaggcctaatagcaagttggtgtccac |
4481052 |
T |
|
| Q |
101 |
aagagaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtg |
200 |
Q |
| |
|
|||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4481051 |
aagagaaagttttgaaccacccttcaatcggcggattcttgactcattgcggatggaactcaaccactgaaagtgtatgtgctggagtgccaatgttgtg |
4480952 |
T |
|
| Q |
201 |
taggccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
| ||||||| ||||| ||||| ||||||||| |||||||||| |
|
|
| T |
4480951 |
ttggccattctttgccgatcagccacctaaccgtagaattat |
4480910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 4564166 - 4563928
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||| || | |
|
|
| T |
4564166 |
attaggcctgaccttgtcattggtggctcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccacagg |
4564067 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
|
|
| T |
4564066 |
agaaagtattgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttg |
4563967 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||| |||| |||||| ||| | ||| ||||| |||| |
|
|
| T |
4563966 |
gccattctttggtgatcagccaacaaactgtagacttat |
4563928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 4514798 - 4515036
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4514798 |
attaggcctgatcttgtcattggtggctcagtggttttgtcgtctgagtttgtgaatgaaattgcagatagaggcctaatagcaagttggtgtccacaag |
4514897 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || |||| ||||||||||||||| | ||| | |
|
|
| T |
4514898 |
agaaagttttgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgagagcatatgcgctggagtgccaatgctttgttg |
4514997 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|| ||| |||| |||||||||| | ||| ||||| |||| |
|
|
| T |
4514998 |
gcaattctttggtgatcaaccaacaaactgtagatttat |
4515036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 4613395 - 4613612
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || |||||||| |||| |
|
|
| T |
4613395 |
attaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcgagctggtgtcctcaag |
4613494 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| || ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| | |
|
|
| T |
4613495 |
agcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttg |
4613594 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
||||||||| || ||||| |
|
|
| T |
4613595 |
gccatttttcgcggatca |
4613612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 4602244 - 4602006
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4602244 |
attaggcctgatcttgtcattggtggctcagtgattttgtcatctgagtttacaaatgaaatttcagatagaggcctaatagcaagttggtgtccacaag |
4602145 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||| | |
|
|
| T |
4602144 |
agaaagtgttgaaccacccttcgatcggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccgatgttgtgttg |
4602045 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
||| |||||||| ||||| ||| | ||| ||||| |||| |
|
|
| T |
4602044 |
gcctttttttgccgatcagccaacaaactgtagatttat |
4602006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 4266843 - 4267081
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| || ||| | || ||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
4266843 |
attaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaaatttcagatagaggactaatagcaagttggtgtccacaag |
4266942 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| | |
|
|
| T |
4266943 |
ataaagtgttgaaccacccttcgattggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgttg |
4267042 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||| |||| |||||| ||| | ||| ||||| |||| |
|
|
| T |
4267043 |
gccattctttggtgatcagccaacaaactgtagatttat |
4267081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 4490032 - 4490270
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||| |||||||||||| || |||||||| || ||| |||| ||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
4490032 |
attaggcctgatcttgttattggtggctcacaggtgttgtcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaag |
4490131 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|||| || ||||| || ||||||||||| ||||||||||||||||| ||||||||||||| || ||| ||| |||||||||||||||||||||||||| | |
|
|
| T |
4490132 |
agaaggtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaatcatggagagtatatgtgctggagtgccaatgttgtgttg |
4490231 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
4490232 |
gccattttttgctgatcaaccacttagcagtagaattat |
4490270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 4557580 - 4557363
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | ||||| ||||||| |
|
|
| T |
4557580 |
attaggcccgatcttgtcatcggtggctcagttgttttgtcatcggagtttgtcaatgaaatttcagatagaggcctaatcgcgggctggtgcccgcaag |
4557481 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||||| |||||||||||| | |
|
|
| T |
4557480 |
agcaagtattaaaccatccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatctgctggagttccaatgttgtgttg |
4557381 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4557380 |
gccattttttgctgatca |
4557363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 4598626 - 4598429
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || | ||||| ||||||| ||||| |
|
|
| T |
4598626 |
attaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcttagttgcaagctggtgtctgcaag |
4598527 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgt |
201 |
Q |
| |
|
|| |||| || ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| |
|
|
| T |
4598526 |
agcaagtattaaaccatccttcaattggtggattcttaactcattgcggatggaactcaaccactgaaagtatatgtgccggagtgccaatgttgtgt |
4598429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 4461578 - 4461340
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4461578 |
attaggcctgatcttgtcattggcggctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcctaatagcaagctggtgtccgcaag |
4461479 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| ||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||||| ||||||||| | |
|
|
| T |
4461478 |
agcaagtactgaaccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgtgctggagtgccgatgttgtgttg |
4461379 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||| |||| |||||| ||| | ||| ||||| |||| |
|
|
| T |
4461378 |
gccattctttggtgatcagccagcaaactgtagatttat |
4461340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 4571427 - 4571210
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||| |
|
|
| T |
4571427 |
attaggcccgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaattgctggttggtgctcgcaag |
4571328 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
||||||| |||||||||||||||||||| || ||||||||||| || |||||||||||||| || ||||| ||| | ||||||| |||||||||||| |
|
|
| T |
4571327 |
agaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgtgtta |
4571228 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4571227 |
gccattttttgctgatca |
4571210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 4579887 - 4579670
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
|||||||| ||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||| |
|
|
| T |
4579887 |
attaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaataacgagctggtgtccgcaag |
4579788 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |||||||||||| | |
|
|
| T |
4579787 |
agcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaatcactgaaagcatatctgctggagttccaatgttgtgttg |
4579688 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
4579687 |
gccatttttcgctgatca |
4579670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 7 - 215
Target Start/End: Complemental strand, 4617474 - 4617266
Alignment:
| Q |
7 |
aggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaagaga |
106 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
4617474 |
aggcctgatcttgtcattggtggctcagtgattttctcatctgagtttacaaatgaaattgcagatagaggcctaatagcaagttggtgtccacaagaca |
4617375 |
T |
|
| Q |
107 |
aagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtaggcc |
206 |
Q |
| |
|
||||||||||||| |||||||| || |||||||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||||||||||| |||| |
|
|
| T |
4617374 |
aagtgttgaaccacccttcaatcggaggattcttgactcattgcggatggaattcaaccactgaaagtatatgcgctggagtgccaatgttgtgttggcc |
4617275 |
T |
|
| Q |
207 |
attttttgc |
215 |
Q |
| |
|
||||||||| |
|
|
| T |
4617274 |
attttttgc |
4617266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 4592686 - 4592448
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||| || || |||||||| |||| |
|
|
| T |
4592686 |
attaggcctgatcttgtcattggtggcacaattgttttgtcatcggagtttgtgaatgaaatttcagatagaggcgtaatcgcgagctggtgtcctcaag |
4592587 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| || ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| | |||||||||||| | |
|
|
| T |
4592586 |
agcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggaattccaatgttgtgttg |
4592487 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||| ||| |||||| ||| | ||| ||||| |||| |
|
|
| T |
4592486 |
gccattctttagtgatcagccaacaaactgtagacttat |
4592448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 4504071 - 4504296
Alignment:
| Q |
1 |
attattaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgc |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| || |||||||| || ||||||||||||| ||| ||||||| || |||||||||||||||| | |
|
|
| T |
4504071 |
attattaggcctgatcttgttattggtggctcagaggtgttgtcatctgattttgtgaatgaaacttctaatagaggacttgtagcaagttggtgtccac |
4504170 |
T |
|
| Q |
101 |
aagagaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtg |
200 |
Q |
| |
|
|||| |||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
4504171 |
aagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagtgccaatgttgtg |
4504270 |
T |
|
| Q |
201 |
taggccattttttgctgatcaaccac |
226 |
Q |
| |
|
| ||||||||||| ||||||| |||| |
|
|
| T |
4504271 |
ttggccatttttttctgatcagccac |
4504296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 219
Target Start/End: Complemental strand, 4458047 - 4457834
Alignment:
| Q |
6 |
taggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaagag |
105 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
4458047 |
taggcctgatcttgtcattggtggctcggttgttttgtcatcggattttgtgaatgaaacttctgatagaggcttaatagcaagttggtgtccacaagat |
4457948 |
T |
|
| Q |
106 |
aaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtaggc |
205 |
Q |
| |
|
|||||||||||||| |||||||| || ||||||||||||||||| ||||| ||||||||||| ||||| |||| ||||||||||||||| || || ||| |
|
|
| T |
4457947 |
aaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatgcgctggagtgccaatgctgcgttggc |
4457848 |
T |
|
| Q |
206 |
cattttttgctgat |
219 |
Q |
| |
|
|||| |||| |||| |
|
|
| T |
4457847 |
cattctttggtgat |
4457834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 4516779 - 4516562
Alignment:
| Q |
1 |
attattaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgc |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||| |||||||||| || ||||||||||||| ||| ||||||||| |||||||||| |||||||||| |
|
|
| T |
4516779 |
attattaggcctgaccttgtcattggtggctcggttattttgtcatccgattttgtgaatgaaacttcggatagaggcgtaatagcaagctggtgtccgc |
4516680 |
T |
|
| Q |
101 |
aagagaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtg |
200 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| || | |||||| | ||||| ||||| ||||||||||| |
|
|
| T |
4516679 |
aagagaaagtgttgaaccatccttcagttggaggattcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagtaccaatgttgtg |
4516580 |
T |
|
| Q |
201 |
taggccattttttgctga |
218 |
Q |
| |
|
| |||| ||||||||||| |
|
|
| T |
4516579 |
ttggcctttttttgctga |
4516562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 4560960 - 4560744
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| ||||| || ||| |||| ||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
4560960 |
attaggcctgatcttgtcattggtggctcggtggttttctcatctgatttt-tgaaagaaatttcagatagaggactaatagcaagttggtgtccacaag |
4560862 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
||||||| |||||||| || ||| | || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
|
|
| T |
4560861 |
agaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttg |
4560762 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
4560761 |
gccattttttgcagatca |
4560744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 4506312 - 4506074
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||||| || ||||||| |||||||||||||||||| |||| |||||||| |||||| | |||| |
|
|
| T |
4506312 |
attaggcctgatcttgtaattggtggctcagtggttttgtcttcagagtttgcaaatgaaatttcagatagaagccttatagcaagctggtgttcacaag |
4506213 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|||||||||| || || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||| | |
|
|
| T |
4506212 |
agaaagtgttaaatcacccttcaattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgctgtgttg |
4506113 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
||| || |||| |||||||||| | ||| ||||| |||| |
|
|
| T |
4506112 |
gccgttctttggtgatcaaccaacaaactgtagatttat |
4506074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 4586091 - 4585853
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||| |||||||||||||||||||| || | ||||||||||| |||||| ||||||||||||||||||||||||||| || ||||||| ||||||| |
|
|
| T |
4586091 |
attagacctgatcttgtcattggtggttccttggttttgtcatctgagtttaagaatgaaatttcagatagaggcctaatcgcgggttggtgcccgcaag |
4585992 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| | |
|
|
| T |
4585991 |
agcaagtattgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttg |
4585892 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||| |||||||||| ||| | ||| |||||||||| |
|
|
| T |
4585891 |
gccattcattgctgatcagccaacaaactgtagaattat |
4585853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 4574763 - 4574554
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| ||||| || ||| |||| ||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
4574763 |
attaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaag |
4574664 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
||||||| |||||||| | |||| | || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| ||| | |
|
|
| T |
4574663 |
agaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttg |
4574564 |
T |
|
| Q |
204 |
gccatttttt |
213 |
Q |
| |
|
|||||||||| |
|
|
| T |
4574563 |
gccatttttt |
4574554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 4626406 - 4626189
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||| |||||||||||| || ||| |||||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
4626406 |
attaggcctgatcttgtgattggtggctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcctaatcgcaagctggtgtccgcaag |
4626307 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||| |||||||| |||||||||||||||| ||||| |||| |||||||| |||||| ||||| | |
|
|
| T |
4626306 |
agaaagtactgaaccatccttcaattggtggattcttaactcattgtggatggaactcaaccattgaaagcatatgcgctggagttccaatgctgtgttg |
4626207 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
4626206 |
gccaaattttgctgatca |
4626189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 4470258 - 4470041
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
|||||||| |||||||||||||| ||||| || ||||| ||||| ||| |||| |||| ||||||||||||||||||||| | | |||||||| |||| |
|
|
| T |
4470258 |
attaggcccgatcttgtcattggcggctcggtagttttctcatcagagattgtaaatggaatttcagatagaggcctaatcgtgaactggtgtcctcaag |
4470159 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| ||||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| | |
|
|
| T |
4470158 |
agcaagtactgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttg |
4470059 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
|||||| |||| |||||| |
|
|
| T |
4470058 |
gccattctttggtgatca |
4470041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 4622597 - 4622380
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||| |||||||| || ||||| || |||||||||| ||||||| |||||||||||||| |||||||||||| ||| |||||||||| |||| |
|
|
| T |
4622597 |
attaggcctgaccttgtcatgggcggctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcctaatcgcaggttggtgtccacaag |
4622498 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| | ||||| ||| ||||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||| ||||| ||||| | |
|
|
| T |
4622497 |
aggaagtacttaaccaccctgcaattggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgtgctggagtttcaatgctgtgttg |
4622398 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
4622397 |
gccatttttcgctgatca |
4622380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 4568511 - 4568297
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||| || ||| |||||||||| ||||||||| ||||||||||||| |
|
|
| T |
4568511 |
attaggccttagcttgtcattggtggctcagttattttgtcatccgagtttgtgaatggaacttcggatagaggccaaatagcaagctggtgtccgcaag |
4568412 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| ||||||||||||| |||||| |||| |||||||||||||||| ||||||||||| || |||||| | ||||| |||| |||||||| ||| | |
|
|
| T |
4568411 |
agcaagtgttgaaccacccttcagttggacgattcttgactcattgtggatggaactccacattggaaagcatttgtgccagagtaccaatgttatgttg |
4568312 |
T |
|
| Q |
204 |
gccattttttgctga |
218 |
Q |
| |
|
||| |||||| |||| |
|
|
| T |
4568311 |
gccttttttttctga |
4568297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 4259831 - 4260069
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||| || | ||||||||||| || |||||||||| ||||||| || ||||||||| |||||||||||||| || || ||||||||||||| |
|
|
| T |
4259831 |
attaggcctgacctcattattggtggctcctttattttgtcatctgagtttgagagtgaaatttcggatagaggcctaatcgcgagctggtgtccgcaag |
4259930 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| ||||||| ||||| |||| |||||||| ||||||||||||||||||||||||| ||||| | ||||| | ||| |||||||||||| | |
|
|
| T |
4259931 |
agcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaactcaaccattgaaagcatttgtgccgaagttccaatgttgtgttg |
4260030 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||||||||||||||| ||| | ||| ||||| |||| |
|
|
| T |
4260031 |
gccattttttgctgatcagccaacaaactgtagatttat |
4260069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 221
Target Start/End: Original strand, 4256349 - 4256505
Alignment:
| Q |
65 |
tttcagatagaggcctaatagcaagttggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaac |
164 |
Q |
| |
|
|||| |||||||| ||||| | |||||||||||||||||| |||| ||||||| ||||| |||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
4256349 |
tttcggatagaggactaatcgagagttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttgactcattgaggatggaactcaac |
4256448 |
T |
|
| Q |
165 |
cacggaaagtgtatgtgctggagtgccaatgttgtgtaggccattttttgctgatca |
221 |
Q |
| |
|
|| ||||| | ||||| ||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
4256449 |
cattgaaagcatttgtgccggagttccaatgttgtgttggccattttttgctgatca |
4256505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 166
Target Start/End: Original strand, 4299498 - 4299660
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
|||||||| || ||||||||||| |||| || |||||||||| ||||||| ||||||||||||| |||||||||||| ||||| | |||||| |||| |
|
|
| T |
4299498 |
attaggccagaccttgtcattggcggcttgtttattttgtcatctgagtttgagaatgaaatttcaaatagaggcctaaccgcaagctagtgtccacaag |
4299597 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaacca |
166 |
Q |
| |
|
| |||| ||||||| ||||||||||| |||||||||||||| || |||||||||||||||| |
|
|
| T |
4299598 |
aacaagtactgaaccacccttcaattggtggattcttgactcactgtggatggaactcaacca |
4299660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 4493346 - 4493208
Alignment:
| Q |
68 |
cagatagaggcctaatagcaagttggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccac |
167 |
Q |
| |
|
|||||||||||||||| || ||||||||||| ||||||||| || ||||||| | ||| ||||| ||||||||||||||||| |||||||||||||| || |
|
|
| T |
4493346 |
cagatagaggcctaattgctagttggtgtccacaagagaaactgctgaaccaccattcgattggtggattcttgactcattgtggatggaactcaactac |
4493247 |
T |
|
| Q |
168 |
ggaaagtgtatgtgctggagtgccaatgttgtgtaggcc |
206 |
Q |
| |
|
||| ||||||| |||||||||||||||||| |||| |
|
|
| T |
4493246 |
caaaaacatatgtgccggagtgccaatgttgtgttggcc |
4493208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 1281567 - 1281352
Alignment:
| Q |
6 |
taggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaagag |
105 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1281567 |
taggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccacaagag |
1281468 |
T |
|
| Q |
106 |
aaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtaggc |
205 |
Q |
| |
|
|||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
1281467 |
aaagtgttgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggc |
1281368 |
T |
|
| Q |
206 |
cattttttgctgatca |
221 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
1281367 |
cattttttgctgatca |
1281352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 1674679 - 1674443
Alignment:
| Q |
6 |
taggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaagag |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||| ||| ||||||||| |||||| |
|
|
| T |
1674679 |
taggcctgatcttgtcattggtggctcagtggttttgtcatctgagtttatgaaagaaatttcagatagaggcctaatatcaaattggtgtccacaagag |
1674580 |
T |
|
| Q |
106 |
aaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtaggc |
205 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||| || |||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||| |
|
|
| T |
1674579 |
aaagtgttgaaccacccttcaatcggcggattcttgacacactgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggc |
1674480 |
T |
|
| Q |
206 |
cattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||||||||||||| ||| | ||| ||||| |||| |
|
|
| T |
1674479 |
cattttttgctgatcagccaacaaactgtagatttat |
1674443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 20863520 - 20863737
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||| ||||| | ||||||||||||||||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
20863520 |
attaggcctgatcttgtcattggtggctcggtgattttttcatctgcgtttgtgaatgaaatttcagatagaggcctaatcgcgagttggtgtccacaag |
20863619 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||| | |||||||| |||||||||||||||| || || ||||||||||||||||||||||||| | |
|
|
| T |
20863620 |
agaaggtgttgaaccatccttcaattggtggatttctaactcattgtggatggaactcaaccattgagagcatatgtgctggagtgccaatgttgtgctg |
20863719 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
20863720 |
gccattttttgctgatca |
20863737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 16685944 - 16686161
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
|||||| |||||||||||||| | || || || ||||||||||| |||||| ||||||||| ||||||||| ||||||| || || ||||| ||||||| |
|
|
| T |
16685944 |
attaggtctgatcttgtcatttgcggttccgtggttttgtcatctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcccgcaag |
16686043 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||||| |||||| ||| ||||||||| |||||||||||| | |
|
|
| T |
16686044 |
agcaagtattaaaccatccttcaatcggtggattcttaactcattgtggatggaactcaaccactgaaagtatatatgctggagttccaatgttgtgttg |
16686143 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
16686144 |
gccattttttgctgatca |
16686161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 24103454 - 24103216
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| || ||| | || ||| ||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
24103454 |
attaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaagtttcagatagaggactaatagcaagttggtgtccacaag |
24103355 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | |
|
|
| T |
24103354 |
ataaagtgttaaaccacccttcgattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttg |
24103255 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||| |||| |||||||||| | ||| ||||| |||| |
|
|
| T |
24103254 |
gccattctttggtgatcaaccaacaaactgtagatttat |
24103216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 6 - 242
Target Start/End: Original strand, 27999778 - 28000014
Alignment:
| Q |
6 |
taggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaagag |
105 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||| ||| ||||||||| |||||| |
|
|
| T |
27999778 |
taggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagatagaggcctaatatcaaattggtgtccacaagag |
27999877 |
T |
|
| Q |
106 |
aaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtaggc |
205 |
Q |
| |
|
||||| |||||||| |||||||| |||| ||||||||||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||| || |
|
|
| T |
27999878 |
aaagttttgaaccacccttcaatcagcgggttcttgactcactgcggatggaactcaaccaccgaaagcatatgcgctggagtgccaatgttgtgttggt |
27999977 |
T |
|
| Q |
206 |
cattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||||||||||||| ||| | ||| ||||| |||| |
|
|
| T |
27999978 |
cattttttgctgatcagccaacaaactgtagatttat |
28000014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 20155244 - 20155290
Alignment:
| Q |
118 |
catccttcaattggcggattcttgactcattgcggatggaactcaac |
164 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| |||||||| ||||| |
|
|
| T |
20155244 |
catccttcaattggaggattcttgacacattgtggatggaattcaac |
20155290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 4363 - 4580
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||| ||||||||||| ||||| || |||||||||| ||||||| ||||||||||||||||||||||||||| || || |||||||| |||| |
|
|
| T |
4363 |
attaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaag |
4462 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||| | |
|
|
| T |
4463 |
agcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgtaggagtgccaatgttgtgttg |
4562 |
T |
|
| Q |
204 |
gccattttttgctgatca |
221 |
Q |
| |
|
||||||||| || ||||| |
|
|
| T |
4563 |
gccatttttcgccgatca |
4580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 3086875 - 3086654
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||| ||||| || || ||||||| ||||||| ||| ||||||||||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
3086875 |
attaggcctgatcttgtcattggcggctcctttattatgtcatctgagtttgagaaagaaatttcagatagaggtctaatcgcaagctggtgtccgcaag |
3086776 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| ||||| || ||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| | |
|
|
| T |
3086775 |
agcaagtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaacggttgaaagcgtacttgctggagtgccaatgttgtgttg |
3086676 |
T |
|
| Q |
204 |
gccattttttgctgatcaacca |
225 |
Q |
| |
|
|||||||| || ||||||||| |
|
|
| T |
3086675 |
gccattttatggagatcaacca |
3086654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 3396 - 3634
Alignment:
| Q |
4 |
attaggcctgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaag |
103 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||||| || |||| ||||||||||||||||||||||||||| |||| |||||||| |||| |
|
|
| T |
3396 |
attaggcctgatcttgtcattggcggctcgtttattttgtcatcagaatttgagaatgaaatttcagatagaggcctaatcacaagctggtgtccacaag |
3495 |
T |
|
| Q |
104 |
agaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacggaaagtgtatgtgctggagtgccaatgttgtgtag |
203 |
Q |
| |
|
|| |||| ||| ||| ||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| |||| |||||||| |||||| | ||| | |
|
|
| T |
3496 |
agcaagtactgatccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgcgctggagtaccaatgctttgttg |
3595 |
T |
|
| Q |
204 |
gccattttttgctgatcaaccacctaacagtagaattat |
242 |
Q |
| |
|
|||||| |||| |||||| ||| | ||| ||||| |||| |
|
|
| T |
3596 |
gccattctttggtgatcagccaacaaactgtagatttat |
3634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 3428 - 3569
Alignment:
| Q |
70 |
gatagaggcctaatagcaagttggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcattgcggatggaactcaaccacgg |
169 |
Q |
| |
|
|||| ||||||| | ||||| ||||||||| ||||| ||||||||||||| |||| | |||| |||||||| |||||||| |||||||||||||||| | |
|
|
| T |
3428 |
gatataggcctagtcgcaagatggtgtccgtaagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaactcaaccattg |
3526 |
T |
|
| Q |
170 |
aaagtgtatgtgctggagtgccaatgttgtgtaggccattttt |
212 |
Q |
| |
|
|||| | ||| ||||||| |||||| || || |||||||||| |
|
|
| T |
3527 |
aaagcatttgttctggagttccaatgctgcgttggccattttt |
3569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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