View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6553_low_19 (Length: 258)
Name: NF6553_low_19
Description: NF6553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6553_low_19 |
 | |
|
| [»] chr8 (6 HSPs) |
| |
|
| [»] chr2 (15 HSPs) |
| |
|
| [»] chr6 (6 HSPs) |
| |
|
| [»] chr4 (4 HSPs) |
| |
|
| [»] scaffold1043 (1 HSPs) |
| |
|
| [»] scaffold0079 (1 HSPs) |
| |
|
| [»] scaffold0688 (1 HSPs) |
| | |
|
| [»] scaffold0097 (1 HSPs) |
| | |
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Alignment Details
Target: chr5 (Bit Score: 183; Significance: 4e-99; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 49 - 255
Target Start/End: Original strand, 10825713 - 10825919
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10825713 |
gcctaatcacaatcaaccctactgcctagcatgcctcggccccctgcgccgcctggcaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
10825812 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10825813 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctgaccacaatatcatcagctatatgcaccacatcccggatgatcgtcagtgtgtcag |
10825912 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
||||||| |
|
|
| T |
10825913 |
gcatctc |
10825919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 49 - 258
Target Start/End: Complemental strand, 7263060 - 7262850
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccc-tgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccg |
147 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
7263060 |
gccttatcataatcaaccctgctgcctagcatgcctcggcccccctgcgccgcctggtaatctgatacgtaagggaagggcgaccagtaccggctatccg |
7262961 |
T |
|
| Q |
148 |
catcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtca |
247 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
7262960 |
catcacctcctggacaatatcctctttagtcatcttggcttgcctgaccacaatatcgtcagctatatgcaccacatctcggatgatcgtcggtgtgtta |
7262861 |
T |
|
| Q |
248 |
ggcatctctct |
258 |
Q |
| |
|
||||||||||| |
|
|
| T |
7262860 |
ggcatctctct |
7262850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 49 - 255
Target Start/End: Complemental strand, 19876704 - 19876498
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||| ||| ||| || |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19876704 |
gcctaatcataattaaccctactgcgtagcatgcctcgcccctctgcgctgcctggcaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
19876605 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19876604 |
atcacctcctagacaatctcctctttagtcatctcgacttgcctggccacaatatcatcagctatatgcaccacatcccggatgatcgttagtgtgtcag |
19876505 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
||||||| |
|
|
| T |
19876504 |
gcatctc |
19876498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 49 - 255
Target Start/End: Original strand, 37980260 - 37980465
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||| ||||||| |||| ||| ||| | |||||| | ||||| ||||||||| ||||||||| |||||||||||||||| ||||| | ||||| || |
|
|
| T |
37980260 |
gcctaataataatcagccctgctgtctaccctgcctctgacccctacgccgcctggcaatctgataagtaagggcagggcgactagtactg-ctatcagc |
37980358 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37980359 |
atcacctcgtggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagcaatatgcaccacatcccggatgatcgtcagtgtgtcag |
37980458 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
|||||| |
|
|
| T |
37980459 |
acatctc |
37980465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 23067301 - 23067167
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
23067301 |
gcctaatcataatcaactctattgcctagcttgcctcggccccctgcgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatcccc |
23067202 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctc |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
23067201 |
atcacctcctggacaatctcctctttagtcatctc |
23067167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 90 - 255
Target Start/End: Complemental strand, 24169627 - 24169462
Alignment:
| Q |
90 |
ccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttg |
189 |
Q |
| |
|
||||| |||||||| ||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
24169627 |
ccctgcgccgcctgacaatctgataattaagggcagtacgactagtactagctatccgcatcacctcctggacaatctcctttttagtcatctcggcttg |
24169528 |
T |
|
| Q |
190 |
cctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
255 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
24169527 |
cctggccacaatatcgtcagcaatatgcaccacatcttggatgatcgtcagtgtgtcaggcatctc |
24169462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 177; Significance: 2e-95; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 41269982 - 41269774
Alignment:
| Q |
50 |
cctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
149 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41269982 |
cctaatcataatcaaccctgctgcctagcatgccttggccccctgcgccgcctggcaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
41269883 |
T |
|
| Q |
150 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
249 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
41269882 |
tcacctcttggacaatctcctctttagtcatctcggtttgcctggccacaatatcatcagctatatgcaccacatcccggatgatcgtcagtgtgtcagg |
41269783 |
T |
|
| Q |
250 |
catctctct |
258 |
Q |
| |
|
||||||||| |
|
|
| T |
41269782 |
catctctct |
41269774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 49 - 255
Target Start/End: Original strand, 44115918 - 44116124
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| || |||||||| ||| ||| | ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
44115918 |
gcctaatcacaatcaaccctactgcctagcatgcatcagccccctgcgccacctagcaatctgatacgtaagggcagggcgaccggtaccggctatccgc |
44116017 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
44116018 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatcctagatgatcgtcagtgtgtcag |
44116117 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
|| |||| |
|
|
| T |
44116118 |
gcgtctc |
44116124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 51 - 258
Target Start/End: Original strand, 42095767 - 42095974
Alignment:
| Q |
51 |
ctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcat |
150 |
Q |
| |
|
||||||||||| |||| | ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
42095767 |
ctaatcataatgaaccttgctgcctagcatgcctcggccccctgcgccgcctggcaatctgatacgtaagggcagggcgaccaataccgactatccgcat |
42095866 |
T |
|
| Q |
151 |
cacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggc |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||| | ||||||| | |
|
|
| T |
42095867 |
cacctcctggacaatctcctctttagtcatctcggcttgcctagccacaatatcatcaaatatatgcaccacatctcggatgatcgtcagcgtgtcagac |
42095966 |
T |
|
| Q |
251 |
atctctct |
258 |
Q |
| |
|
|| ||||| |
|
|
| T |
42095967 |
atttctct |
42095974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 49 - 255
Target Start/End: Original strand, 8317040 - 8317246
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||| |||||||||| || ||||||||| ||| ||| | || ||||||||| ||||||||| |||||||||||||||| |||| ||||||||| |
|
|
| T |
8317040 |
gcctaatcacaatcaaccctgctacctagcatgtctctgcctcatgcgccgcctggcaatctgataagtaagggcagggcgactagtagtagctatccgc |
8317139 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8317140 |
atcacctcctggacaatctcctatttagtgatctcggtttgcttggccacaatatcgtcagcaatatgcaccacatcccggatgatcgtcagtgtgtcaa |
8317239 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
||||||| |
|
|
| T |
8317240 |
gcatctc |
8317246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 80 - 255
Target Start/End: Original strand, 20477648 - 20477823
Alignment:
| Q |
80 |
tgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtca |
179 |
Q |
| |
|
|||||| |||||||| ||||||| | ||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
20477648 |
tgcctctgccccctgcgccgcctcgcaatatgataagtaagggcagggcgactagtactagctatccgcatcacctcctggacgatctcctctttagtca |
20477747 |
T |
|
| Q |
180 |
tctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
255 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
20477748 |
tctcggcatgcctggccacaatatcatcagcaatatgcaccacatcccatatgatcgtcagtgtgtcaggcatctc |
20477823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 258
Target Start/End: Original strand, 18701177 - 18701378
Alignment:
| Q |
57 |
ataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctc |
156 |
Q |
| |
|
||||||| |||||||| ||| ||||||| |||||||| | |||||| ||||||||||||||||||||||||||| |||| | | ||||| |||||||| |
|
|
| T |
18701177 |
ataatcagccctactgtctacgatgcctctgccccctgcgatgcctggcaatctgatacgtaagggcagggcgaccggtactgccaatccgaatcacctc |
18701276 |
T |
|
| Q |
157 |
ctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctct |
256 |
Q |
| |
|
|| ||| | |||||||||||||||| | | ||| | |||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
18701277 |
ctaaacagtatcctctttagtcatcttgccgctcctagacacaatattatcagctatctgcaccacatccctaatgatcgtcagtgtgtcaggcatctct |
18701376 |
T |
|
| Q |
257 |
ct |
258 |
Q |
| |
|
|| |
|
|
| T |
18701377 |
ct |
18701378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 175; Significance: 3e-94; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 49 - 255
Target Start/End: Complemental strand, 31387652 - 31387446
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
31387652 |
gcctaatcacaatcaaccctgctgcctagcatgcctcggccccctgcgccgcctggcaatctgatacgtaagggcagggcgaccagtaccggctatccac |
31387553 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
31387552 |
atcacctcctggacagtctcctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatcccggatgatcgtcagtgtgtcag |
31387453 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
||||||| |
|
|
| T |
31387452 |
gcatctc |
31387446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 49 - 255
Target Start/End: Original strand, 15291587 - 15291793
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
15291587 |
gcctaatcataatcaaccttactgcctagcatgcctcggccctctgcgccgcctggcaatctgatacgtaagggcaggacgaccaataccggctatccgt |
15291686 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15291687 |
atcacctcctggacaatctcctatttagtcatctcggcttgcctgaccacaatatcatcagctatatgcaccacatcccggatgatcgtcagtgtgtcag |
15291786 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
|||||| |
|
|
| T |
15291787 |
acatctc |
15291793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 49 - 255
Target Start/End: Original strand, 27106024 - 27106230
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||| |||||||| | |||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
27106024 |
gcctaatcacaatcaaccatgctgcctagcatgcctcggccccctacgccgcctgacaatctgatacataagggcagggcgaccagtaccggctatccgc |
27106123 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
27106124 |
atcacctcctggaaaatctcctctttagtcatctcggcttgcctgaccacaatatcatcagctatatgcaccatatcccggatgatcgtcagtgtgtcag |
27106223 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
|||||| |
|
|
| T |
27106224 |
acatctc |
27106230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 49 - 254
Target Start/End: Original strand, 4911934 - 4912139
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||| |||||||| | |||||||| ||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||||| |||| |
|
|
| T |
4911934 |
gcctaatcacaatcaaccatgctgcctagtatgcctcagccccctgcgccgcctggcaatctgatatataagggcagggcgaccaataccggctacccgc |
4912033 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4912034 |
atcacctcctggacaatcttctctttagtcatctcggcttgcctggccacaatatcatcggttatatgcaccacatcccggatgatcgtcagtgtgtcag |
4912133 |
T |
|
| Q |
249 |
gcatct |
254 |
Q |
| |
|
|||||| |
|
|
| T |
4912134 |
gcatct |
4912139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 49 - 255
Target Start/End: Original strand, 42463621 - 42463827
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
|||||||| |||||||| | | ||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42463621 |
gcctaatcgcaatcaaccatgcggcctagcatgcctcggctccctgcgccgcctgacaatctaatacgtaagggcagggcgaccagtaccggctatccgc |
42463720 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
42463721 |
atcacctcctggacaatctcctcgttagtcatctcggctttcctgaccacaatatcatcagctatatgcaccacatcccggatgatcgttagtgtgtcag |
42463820 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
|||||| |
|
|
| T |
42463821 |
acatctc |
42463827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 46192293 - 46192497
Alignment:
| Q |
51 |
ctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcat |
150 |
Q |
| |
|
|||||||||||||| | | |||||||| ||||||||||||||| | |||||| |||||||||| |||||| |||||||| |||||||| ||||||||| |
|
|
| T |
46192293 |
ctaatcataatcaaacgtgctgcctagaatgcctcggccccctacgtcgcctgacaatctgatacataaggggagggcgactagtaccggttatccgcat |
46192392 |
T |
|
| Q |
151 |
cacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggc |
250 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
46192393 |
cacctccaggacaatctcctctttagtcatctcggcttgcctggccacaatatcatcaactatatgcaccacatcccggatgatcgtgagtgtgtcagac |
46192492 |
T |
|
| Q |
251 |
atctc |
255 |
Q |
| |
|
||||| |
|
|
| T |
46192493 |
atctc |
46192497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 49 - 255
Target Start/End: Complemental strand, 18243077 - 18242871
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||| ||||||| |||| ||||||| | |||||| |||||||| ||||||||| ||||||||| |||||||||||||||| ||||| | |||| | |
|
|
| T |
18243077 |
gcctaataataatcagccctgctgcctaccctgcctctgccccctgcgccgcctggcaatctgataagtaagggcagggcgactagtactagatatctgt |
18242978 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
18242977 |
atcacctcctagacgatctcctctttagtcatatcggcttgcctggccacaatatcgtcagcaatatgcaccagatccgggatgatcgtcagtgtgtcag |
18242878 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
||||||| |
|
|
| T |
18242877 |
gcatctc |
18242871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 106 - 255
Target Start/End: Original strand, 42055805 - 42055954
Alignment:
| Q |
106 |
aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcg |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |
|
|
| T |
42055805 |
aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcagctttcttggccacaatatca |
42055904 |
T |
|
| Q |
206 |
tcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
255 |
Q |
| |
|
|| |||||||||| |||||| ||||||||||| |||||||||||||||| |
|
|
| T |
42055905 |
ccaactatatgcacaacatcctggatgatcgtcagtgtgtcaggcatctc |
42055954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 49 - 255
Target Start/End: Complemental strand, 50915002 - 50914796
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||| ||||||| |||| ||||||| | | |||| | |||||| |||||||| ||| ||||| |||||||||||||| | ||||| ||||||||| |
|
|
| T |
50915002 |
gcctaataataatcagccctgctgcctaccctacctctggcccctgcgccgcctgacaatttgataagtaagggcagggcggctagtactagctatccgc |
50914903 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| || ||||||||| |
|
|
| T |
50914902 |
atcacctcctggacgatctcctctttagtcgtctcggcttgcctggccacaatatcgtcaacaatatgcaccacatctcggatgatcctcagtgtgtcag |
50914803 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
||||||| |
|
|
| T |
50914802 |
gcatctc |
50914796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 50 - 255
Target Start/End: Original strand, 46526416 - 46526621
Alignment:
| Q |
50 |
cctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
149 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
46526416 |
cctaatcataatcaaccctgctgcctagcatgcctcggccccctgcgccgcctggcaatctgatacgtaagggcagggcgactagtaccggctatccgca |
46526515 |
T |
|
| Q |
150 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
249 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
46526516 |
tcacctactggacaatctcctctttagtcatctcggcttgcctagccacaatatcgccaactatatgcaccacatcccggatgatcgtcagtgtgtcagg |
46526615 |
T |
|
| Q |
250 |
catctc |
255 |
Q |
| |
|
|||||| |
|
|
| T |
46526616 |
catctc |
46526621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 52 - 254
Target Start/End: Original strand, 6272856 - 6273058
Alignment:
| Q |
52 |
taatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatc |
151 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6272856 |
taatcataatcaatcttactgcctagcatgcctcggccccctgcgccgcctggaaatctgatacgtaagggcagggtgaccagtaccggctatccgcatc |
6272955 |
T |
|
| Q |
152 |
acctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggca |
251 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
6272956 |
acctcctggacaatctcctctttagtcatctcgtcttgcctggccacaatatcgtcaactatatgcaccacatcccagatgatcgttaatgtgtcaggca |
6273055 |
T |
|
| Q |
252 |
tct |
254 |
Q |
| |
|
||| |
|
|
| T |
6273056 |
tct |
6273058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 42014258 - 42014050
Alignment:
| Q |
50 |
cctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
149 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
42014258 |
cctaatcataatcaactctgctgcctagcatgcctcggccccctgctccgcctagcaatctgatacgtaagggtagggcgaccagtaccggctacccgca |
42014159 |
T |
|
| Q |
150 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
249 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
42014158 |
tcacctcctggaaaatcttctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatctcggatgatcgtcaatgtgtcagg |
42014059 |
T |
|
| Q |
250 |
catctctct |
258 |
Q |
| |
|
||||||||| |
|
|
| T |
42014058 |
catctctct |
42014050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 52 - 247
Target Start/End: Complemental strand, 41964451 - 41964256
Alignment:
| Q |
52 |
taatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatc |
151 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||| | || |||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41964451 |
taatcataatcaaccctactgcctagcatgcctcgaccccctgcgtcgtctggcaatctgatacgtaagggcagggcgaccagtaccggctatccgcatc |
41964352 |
T |
|
| Q |
152 |
acctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtca |
247 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||||||||||||||||||||| || ||||| |
|
|
| T |
41964351 |
acctcctggaaaatctcctctttagtcatctcggcttgcctgaccacaatatcatcaactatattcaccacatcccggatgatcgtcagtctgtca |
41964256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 49 - 255
Target Start/End: Complemental strand, 31593942 - 31593737
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||| ||||||| |||| ||||||| | |||||| |||| || ||||||||| ||||||||| |||||||||||||||| ||||| ||||||||| |
|
|
| T |
31593942 |
gcctaataataatcagccctgctgcctaccctgcctctacccc-tgcgccgcctggaaatctgataagtaagggcagggcgactagtactagctatccgc |
31593844 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||| |||| ||| |||||||||||||||||||||||||| || ||||||||||||||||| || |||||||||||||||||||||||| ||||||||| |
|
|
| T |
31593843 |
atcaaatcctagacgatctcctctttagtcatctcggcttggctagccacaatatcgtcagcaatttgcaccacatcccggatgatcgtcagtgtgtcag |
31593744 |
T |
|
| Q |
249 |
gcatctc |
255 |
Q |
| |
|
||||||| |
|
|
| T |
31593743 |
gcatctc |
31593737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 80 - 255
Target Start/End: Complemental strand, 10554701 - 10554526
Alignment:
| Q |
80 |
tgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtca |
179 |
Q |
| |
|
|||||| | |||||| | ||||||| ||| ||||| |||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
10554701 |
tgcctctggcccctgcgtcgcctggcaatttgataagtaagggcagggcgactagtactagctatctacatcacctcctggataatctcctctttagtca |
10554602 |
T |
|
| Q |
180 |
tctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
255 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10554601 |
tctcggcttgcctggccacaatatcgtcaccaatatgcaccacatcccggatgatcgtcaatgtgtcaggcatctc |
10554526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 49 - 187
Target Start/End: Original strand, 45075571 - 45075710
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccc-tgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccg |
147 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||| | ||||||||| |||||||||||||||| | || || |||||||||||||||| |
|
|
| T |
45075571 |
gcctaatcataatcaaccctgttgcctagcatgcctcgccccccctacgccgcctggcaatctgatacgtaaggatatggtgatcagtaccggctatccg |
45075670 |
T |
|
| Q |
148 |
catcacctcctggacaatctcctctttagtcatctcggct |
187 |
Q |
| |
|
||||||||| |||| ||||||||||||| | ||||||||| |
|
|
| T |
45075671 |
catcacctcttggataatctcctctttatttatctcggct |
45075710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 249
Target Start/End: Complemental strand, 3939995 - 3939852
Alignment:
| Q |
106 |
aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcg |
205 |
Q |
| |
|
|||||||||| |||||| |||||||||||||| | | ||||| |||| |||||| || | |||||||||||| |||||||| | ||||||||| || |
|
|
| T |
3939995 |
aatctgatacataagggtagggcgaccagtactgccaatccggatcatctcctgcaccagctcctctttagttatctcggcgctcatggccacaacatta |
3939896 |
T |
|
| Q |
206 |
tcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
249 |
Q |
| |
|
||| |||| ||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
3939895 |
tcaactatctgcacgacatccctaatgatcgtcagtgtgtcagg |
3939852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 11405164 - 11405241
Alignment:
| Q |
60 |
atcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtac |
137 |
Q |
| |
|
||||||||| ||||||| |||||| |||||||| || | |||| || |||||| ||||||||||||||||||||| |
|
|
| T |
11405164 |
atcaaccctgctgcctacgatgcctatgccccctgcgctgtctggccatttgatacataagggcagggcgaccagtac |
11405241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 51 - 256
Target Start/End: Original strand, 177823 - 178028
Alignment:
| Q |
51 |
ctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcat |
150 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
177823 |
ctaatcataatcaaccctgttgcctagcatgcctcggccccctatgccgcctggcaatctgatacgtaagggcagggcgaccagtaccggctatccgcat |
177922 |
T |
|
| Q |
151 |
cacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggc |
250 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||| ||||||||||| |
|
|
| T |
177923 |
cacctcctggacaatcttctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatctcagatgatcgtcagtgtgtcaggc |
178022 |
T |
|
| Q |
251 |
atctct |
256 |
Q |
| |
|
|||||| |
|
|
| T |
178023 |
atctct |
178028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 57 - 255
Target Start/End: Complemental strand, 52561204 - 52561006
Alignment:
| Q |
57 |
ataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctc |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52561204 |
ataatcaaccctactgcctagcatgcctcggccccctgcgccgcctgacaatctgttacgtaagggcagggcgaccagtaccggctatccgcatcacctc |
52561105 |
T |
|
| Q |
157 |
ctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||| |
|
|
| T |
52561104 |
ctggacaatctcctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatcccggatgattgtcagtgtgtcagacatctc |
52561006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 50 - 258
Target Start/End: Original strand, 18942999 - 18943207
Alignment:
| Q |
50 |
cctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
149 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||| |||||| | ||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18942999 |
cctaatcataatcaaccctgctgcctagcatgcctcgaccccctgcaccgcctcgcaatttgatacgtaagggcagggcgaccagtaccggctatccgta |
18943098 |
T |
|
| Q |
150 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
249 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||| || |||||||| | |
|
|
| T |
18943099 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcaggtatatgcaccacatacaggatgatcatcagtgtgtcaag |
18943198 |
T |
|
| Q |
250 |
catctctct |
258 |
Q |
| |
|
||||||||| |
|
|
| T |
18943199 |
catctctct |
18943207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 48164928 - 48164720
Alignment:
| Q |
50 |
cctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
149 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48164928 |
cctaatcataatcaaccctgctgcctagcatgcctcgaccccctgcgccgcctgacaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
48164829 |
T |
|
| Q |
150 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
249 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
48164828 |
tcacctcctggacaatatcctctttagtcatctcggctttcctggtcacaatatcatcagttatatgcaccacatctcggatgatcgtcagtgtgtcaaa |
48164729 |
T |
|
| Q |
250 |
catctctct |
258 |
Q |
| |
|
||||||||| |
|
|
| T |
48164728 |
catctctct |
48164720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 50 - 254
Target Start/End: Complemental strand, 45034795 - 45034591
Alignment:
| Q |
50 |
cctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
149 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
45034795 |
cctaatcataatcaaccctgctgcctagcatgcctcggccccctgcgccgcctggcaatttgatacgtaagggcggggcgatcagtaccggatatccgca |
45034696 |
T |
|
| Q |
150 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
249 |
Q |
| |
|
|||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
45034695 |
tcacctcctggacaatcttttcattagtcatctcagcttgcctggccacaatatcatcagctatatgcaccacctcccggatgatcgccagtgtgtcagg |
45034596 |
T |
|
| Q |
250 |
catct |
254 |
Q |
| |
|
||||| |
|
|
| T |
45034595 |
catct |
45034591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 18908242 - 18908114
Alignment:
| Q |
130 |
accagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccgg |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
18908242 |
accagtaccggctatccgcatcacctcctggacaatctcctctttaggcatttcggcttgcctggccacagtatcgtcagctatatgcaccacatcccag |
18908143 |
T |
|
| Q |
230 |
atgatcgtcggtgtgtcaggcatctctct |
258 |
Q |
| |
|
|||||| || ||||||||||||||||||| |
|
|
| T |
18908142 |
atgatcatcagtgtgtcaggcatctctct |
18908114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 49 - 248
Target Start/End: Complemental strand, 55150959 - 55150760
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||| ||||||| | | ||||||| | |||||| |||||||| ||||||||| ||||||||| |||||||||||||||| ||||| | ||||||| |
|
|
| T |
55150959 |
gcctaataataatcagtcatgctgcctaccctgcctctgccccctgcgccgcctggcaatctgataagtaagggcagggcgactagtactagttatccgc |
55150860 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||||||||| ||| ||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||| || ||||||||| |
|
|
| T |
55150859 |
atcacctcctagacgatctcctctttagtcctctcggcttgcctgaccataatatcgtcagcaatatgcaccacatctcggatgatcatcagtgtgtcag |
55150760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 9220 - 9108
Alignment:
| Q |
140 |
gctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcg |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
9220 |
gctatccgcatcacctcctggacaatctcctttctactcatctcggcttgcctggccacaatatcatcagcaatatgcaccacatcccggatgatcgtca |
9121 |
T |
|
| Q |
240 |
gtgtgtcaggcat |
252 |
Q |
| |
|
|||||||||||| |
|
|
| T |
9120 |
ctgtgtcaggcat |
9108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 258
Target Start/End: Original strand, 13825446 - 13825654
Alignment:
| Q |
50 |
cctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
149 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| |||||||| || |||||| |||| ||||| ||||||||||||||| ||||| | |||| | |
|
|
| T |
13825446 |
cctaatgataatcaaccctactgcctatggtgcctatgccccctgcgctgcctggcaatccgatacataagggcagggcgactagtactatcaatccaaa |
13825545 |
T |
|
| Q |
150 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
249 |
Q |
| |
|
||| |||||| || | |||| |||||||||||||||| | | ||||||| || |||||||| ||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
13825546 |
tcatctcctgcaccagctccgctttagtcatctcggcactcatagccacaacattatcagctatctgcacgacatccctgatgatcgtaagtgtgtcagg |
13825645 |
T |
|
| Q |
250 |
catctctct |
258 |
Q |
| |
|
||||||||| |
|
|
| T |
13825646 |
catctctct |
13825654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 18911965 - 18911880
Alignment:
| Q |
50 |
cctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagt |
135 |
Q |
| |
|
||||||||||||||||| | ||||||||||||| | ||||||||| ||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
18911965 |
cctaatcataatcaaccttgctgcctagcatgctttggccccctgcgccgcctggcaatctgatatgtaagggcagggcgaccagt |
18911880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 79 - 258
Target Start/End: Original strand, 54315312 - 54315491
Alignment:
| Q |
79 |
atgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtc |
178 |
Q |
| |
|
||||||| |||| ||| || |||||| || ||||||||||||||||||||||||| || | | |||| ||| ||| || | |||||||| | ||||| |
|
|
| T |
54315312 |
atgcctctgccctctgcgctgcctggcaaactgatacgtaagggcagggcgaccaatattgtcaatcctaatcgccttctaaataatctcctatgtagtc |
54315411 |
T |
|
| Q |
179 |
atctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctct |
258 |
Q |
| |
|
|||| | | |||||||||||||| ||| |||| ||||||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
54315412 |
atcttgccgctcctggccacaatattatcatctatctgcaccacatccctgatgatcgtcaatgtgtcaggcatctctct |
54315491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 10902 - 10817
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccag |
134 |
Q |
| |
|
||||||| ||||||| |||| ||||||| | |||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
10902 |
gcctaataataatcagccctgctgcctaccctgcctctgccccctgcgccgcctgacaatctgataagtaagggcagggcgaccag |
10817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 158; Significance: 4e-84; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 49 - 258
Target Start/End: Original strand, 31501135 - 31501344
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
31501135 |
gcctaatcacaatcaaccctgctgcctagcatgcctcggccccctgcgtcgcctgaaaatctgatacgtaagggcaaggcgaccagtaccggctatccac |
31501234 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || |||||| |
|
|
| T |
31501235 |
atcacctcctggacaatatcctctttagtcatctcggcttgcctggccacaatatcatcagctatatgcaccacatcccggataatcgtcagtttgtcag |
31501334 |
T |
|
| Q |
249 |
gcatctctct |
258 |
Q |
| |
|
|||||||||| |
|
|
| T |
31501335 |
gcatctctct |
31501344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 52 - 252
Target Start/End: Complemental strand, 4174896 - 4174696
Alignment:
| Q |
52 |
taatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatc |
151 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||| ||| | | ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4174896 |
taattataatcaaccctactgcctagcatacctcgacccacagcgccgcttggcaatctgatacgtaacggcagggcgaccagtaccggctatccgcatc |
4174797 |
T |
|
| Q |
152 |
acctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggca |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
4174796 |
acctcctggacaatctcctctttagtcatctcggcttgtctggccacaatatcatcagctatatgcaccacatcccggatgatcgtcagtgtgttaggca |
4174697 |
T |
|
| Q |
252 |
t |
252 |
Q |
| |
|
| |
|
|
| T |
4174696 |
t |
4174696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 49 - 258
Target Start/End: Original strand, 40612850 - 40613059
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| |||||||| ||| |||| ||||||||||||| ||||||||||| |||||||||| |||||| |
|
|
| T |
40612850 |
gcctaatcataatcaaccctgctgcctaccatgcctctgccccctgcgccacctgacaatctgatacgtacgggcagggcgatcagtaccggccatccgc |
40612949 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
40612950 |
atcacctcctagacaatctcctctttagtcatctcggcttgcttggccacaatatcattagctatatgaaccacatcccggatgatcgtcagtgtgtcag |
40613049 |
T |
|
| Q |
249 |
gcatctctct |
258 |
Q |
| |
|
|||||||||| |
|
|
| T |
40613050 |
gcatctctct |
40613059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 26393874 - 26393702
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||||||||| | |||| |||||||||||||||||||||||||| |||||||| |||||||| | |
|
|
| T |
26393874 |
gcctaatcataatcaaccctgctgactagcatgcctcggccccctgcgtcgccgggtaatctgatacgtaagggcagggcaaccagtactggctatccac |
26393775 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcacca |
221 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26393774 |
atcacctcctggacaatctcctctttagtcatctcggattgcctggccacaatatcgtcagctatatgcacca |
26393702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 51 - 255
Target Start/End: Complemental strand, 2777268 - 2777064
Alignment:
| Q |
51 |
ctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcat |
150 |
Q |
| |
|
||||| ||||||| || | ||||||| | |||||| |||||||| ||||||||| ||||||||| ||||||| ||||| || ||||| ||||||||||| |
|
|
| T |
2777268 |
ctaataataatcagccatgctgcctaccctgcctctgccccctgcgccgcctggaaatctgataagtaaggggagggccactagtactagctatccgcat |
2777169 |
T |
|
| Q |
151 |
cacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggc |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
2777168 |
cacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcaacaatatgcatcacatcccggatgatcgtcaatgtgtcaggc |
2777069 |
T |
|
| Q |
251 |
atctc |
255 |
Q |
| |
|
||||| |
|
|
| T |
2777068 |
atctc |
2777064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 70 - 255
Target Start/End: Complemental strand, 34458617 - 34458432
Alignment:
| Q |
70 |
ctgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcc |
169 |
Q |
| |
|
||||||| ||||| | |||||||| ||||||||| ||||||||| |||||||||||| |||| ||||| |||||| | |||||||||||||||||| || |
|
|
| T |
34458617 |
ctgcctaccatgcatatgccccctgcgccgcctggcaatctgatatgtaagggcagggagaccggtacctgctatctgtatcacctcctggacaatcacc |
34458518 |
T |
|
| Q |
170 |
tctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
255 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
34458517 |
tctttaatcatctcggcttgcctggccacaatatcatcagctatatgcaccacatcccgaatgatcgtcagtgtgtcaggcatctc |
34458432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 80 - 255
Target Start/End: Original strand, 2119882 - 2120057
Alignment:
| Q |
80 |
tgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtca |
179 |
Q |
| |
|
|||||| |||||||| |||||||| ||||||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2119882 |
tgcctctgccccctgcgccgcctgaaaatctgataagtaagggcaacgcgactagtactagctatccgcatcacctcctggacaatctcctctttagtca |
2119981 |
T |
|
| Q |
180 |
tctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
255 |
Q |
| |
|
|||||||||| |||||||||||| | ||| ||||||||||| |||| |||||||||||| |||||||||||||||| |
|
|
| T |
2119982 |
tctcggcttgtctggccacaataccatcaactatatgcaccccatctcggatgatcgtcagtgtgtcaggcatctc |
2120057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 50 - 181
Target Start/End: Complemental strand, 19508633 - 19508503
Alignment:
| Q |
50 |
cctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
149 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
19508633 |
cctaatcataatcaacactgctgcctagcatgccttggccccctgtgccgcctggcaatctgatacgtaaggaca-tgcgaccagtaccggctatccgca |
19508535 |
T |
|
| Q |
150 |
tcacctcctggacaatctcctctttagtcatc |
181 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
19508534 |
tcacctcctggacaatctcctctttagtcatc |
19508503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 258
Target Start/End: Complemental strand, 29902373 - 29902164
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||| |||||||||| ||||||| ||| ||| ||||||| || |||||| |||| ||| ||||||||||||||||||||| | | ||||| |
|
|
| T |
29902373 |
gcctaatcaaaatcaaccctgctgcctacgatgtctctgccccctacgctgcctggaaatccaatatgtaagggcagggcgaccagtagtgccaatccga |
29902274 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| | |||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
29902273 |
atcacctcctgaaatatctcctctttagtcatctcgccactcctgaccacaatattatcagctatctgcaccacatcccggatgatcgtcagtgtgtcga |
29902174 |
T |
|
| Q |
249 |
gcatctctct |
258 |
Q |
| |
|
|||||||||| |
|
|
| T |
29902173 |
gcatctctct |
29902164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 258
Target Start/End: Original strand, 15738222 - 15738423
Alignment:
| Q |
57 |
ataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctc |
156 |
Q |
| |
|
||||||| |||||||| ||| ||||||| |||||||| | |||||| ||||||||||||||||||||||||||| |||| | | ||||| |||||||| |
|
|
| T |
15738222 |
ataatcagccctactgtctacgatgcctctgccccctgcgatgcctggcaatctgatacgtaagggcagggcgaccggtactgccaatccgaatcacctc |
15738321 |
T |
|
| Q |
157 |
ctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctct |
256 |
Q |
| |
|
|| ||| | |||||||||||||||| | | ||| | |||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
15738322 |
ctaaacagtatcctctttagtcatcttgccgctcctagacacaatattatcagctatctgcaccacatccctaatgatcgtcagtgtgtcaggcatctct |
15738421 |
T |
|
| Q |
257 |
ct |
258 |
Q |
| |
|
|| |
|
|
| T |
15738422 |
ct |
15738423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 694860 - 694944
Alignment:
| Q |
171 |
ctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
255 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
694860 |
ctttagtcatctcggcttgcctagccacaatatcatcagttatatgcaccacatcccggatgatcgtcagtgtgtcaggcatctc |
694944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 258
Target Start/End: Complemental strand, 21833606 - 21833397
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||| ||||||||| || ||||||| ||||||| |||||||| | ||||| ||| |||| |||||||||||||||||||||| | ||||| |
|
|
| T |
21833606 |
gcctaatgataatcaactctgctgcctacgatgcctctgccccctgagatgcctgacaattcgatatgtaagggcagggcgaccagtactaccaatccgg |
21833507 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||| |||||| |||| |||||||||||||||||| | ||| ||||||||| || ||||| | ||||| ||||||| |||||| ||| |||||||| |
|
|
| T |
21833506 |
atcatctcctgcacaagctcctctttagtcatctcttcctgcatggccacaacattatcagccacctgcacgacatccctgatgattgtcaatgtgtcag |
21833407 |
T |
|
| Q |
249 |
gcatctctct |
258 |
Q |
| |
|
| |||||||| |
|
|
| T |
21833406 |
ggatctctct |
21833397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 20725616 - 20725488
Alignment:
| Q |
58 |
taatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcc |
157 |
Q |
| |
|
|||| |||||| ||||||| |||||| ||||||||||| || || |||||||||| ||||||||||||||||||||| | | ||||| |||| |||| |
|
|
| T |
20725616 |
taattaaccctgctgcctacgatgcctatgccccctgtgctgcatgacaatctgatacataagggcagggcgaccagtactgccaatccggatcatctcc |
20725517 |
T |
|
| Q |
158 |
tggacaatctcctctttagtcatctcggc |
186 |
Q |
| |
|
|| || | ||||||||||||||||||||| |
|
|
| T |
20725516 |
tgcacgagctcctctttagtcatctcggc |
20725488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 26172783 - 26172682
Alignment:
| Q |
99 |
gcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccac |
198 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||| | | ||||| || | |||||| || | |||| ||||||||||||| || ||| ||||||| |
|
|
| T |
26172783 |
gcctggcaatctaatacgtaagggcagggcgaccagtactgccaatccggataatctcctgcaccagctccgctttagtcatctctgcctgcatggccac |
26172684 |
T |
|
| Q |
199 |
aa |
200 |
Q |
| |
|
|| |
|
|
| T |
26172683 |
aa |
26172682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 26172681 - 26172643
Alignment:
| Q |
220 |
cacatcccggatgatcgtcggtgtgtcaggcatctctct |
258 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
26172681 |
cacatccctgatgatcgtcagtgtgtcaggcatctctct |
26172643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 154; Significance: 9e-82; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 49 - 258
Target Start/End: Complemental strand, 5620442 - 5620233
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
5620442 |
gcctaatcataatcaaccctgctgcctagcatgcctcggctccctgcgccgcctggcaatctgatacgtaagggcagggcgactagtatcggctatccgc |
5620343 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||| || ||||||||| |
|
|
| T |
5620342 |
atcacctcctggacaatctcttctttagtcatctcggcttgtctgtccacaatatcgtcaactatatgcaccacatctcggatgatcatcagtgtgtcag |
5620243 |
T |
|
| Q |
249 |
gcatctctct |
258 |
Q |
| |
|
|||| ||||| |
|
|
| T |
5620242 |
gcatatctct |
5620233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 49 - 258
Target Start/End: Complemental strand, 33523559 - 33523350
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
|||||||||||||||||||||||| ||| | |||| | |||||||| ||||||| | ||||||||| |||||||||||||| ||||||| |||||| || |
|
|
| T |
33523559 |
gcctaatcataatcaaccctactgtctaccctgccgctgccccctgcgccgcctagcaatctgatatgtaagggcagggcggccagtactggctattcgt |
33523460 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
33523459 |
atcacctcctggacaatctcctccttagtcatctcgtctttcctggccacaatatcatcagttatatgcaccacatcccggatgatcgtcagtgtgtcag |
33523360 |
T |
|
| Q |
249 |
gcatctctct |
258 |
Q |
| |
|
||||||||| |
|
|
| T |
33523359 |
acatctctct |
33523350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 49 - 247
Target Start/End: Original strand, 19268753 - 19268951
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||||| |||||||||| ||||||| |||||||| |||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||| | |
|
|
| T |
19268753 |
gcctaatcagaatcaaccctgctgcctaccatgcctctgccccctgcgccgcctggcaatctgatacgtatgggcagggcgaccagtactggctatctga |
19268852 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtca |
247 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||| | | ||| ||||||||||| |||||||||||||||||||| | |||||||||| |||||||| |
|
|
| T |
19268853 |
atcacctcttggacaatctcctctttaatcatctcgtcgttccttgccacaatatcatcagctatatgcaccacatctcagatgatcgtcagtgtgtca |
19268951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 2946241 - 2946153
Alignment:
| Q |
167 |
tcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctc |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
2946241 |
tcctctttagtcatctcggcttgcctggccacaatatcatcaactatatgcaccacatcccggatgattgtcagtgtgtcaggcatctc |
2946153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 235
Target Start/End: Complemental strand, 23058828 - 23058639
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcag---ggcgaccagtaccggctatc |
145 |
Q |
| |
|
||||||| | |||||||||| ||||||| ||||||| ||| |||| || ||||| |||| ||||||||||||||| ||||||||||| | | ||| |
|
|
| T |
23058828 |
gcctaataagaatcaaccctgctgcctacgatgcctctgccacctgcgctacctggaaatccgatacgtaagggcagcagggcgaccagtagtgccaatc |
23058729 |
T |
|
| Q |
146 |
cgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatc |
235 |
Q |
| |
|
|| | |||||| || ||||||||||||||||||||||| | | ||||||||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
23058728 |
cgaaacacctcatgaacaatctcctctttagtcatctcaccgctcatggccacaatatcatcagctatctgcaccacatctcggatgatc |
23058639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 258
Target Start/End: Original strand, 33522380 - 33522522
Alignment:
| Q |
116 |
gtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatat |
215 |
Q |
| |
|
||||||||| |||||| ||||||| |||| ||||| |||||||||| |||||||| ||||||| ||||| | ||||| |||||||| |||||||||| |
|
|
| T |
33522380 |
gtaagggcaaggcgactagtaccgactattcgcataacctcctggaaaatctcctttttagtcccgtcggcctttctggcaacaatatcatcagctatat |
33522479 |
T |
|
| Q |
216 |
gcaccacatcccggatgatcgtcggtgtgtcaggcatctctct |
258 |
Q |
| |
|
|||||||||| ||||||||| || |||||||| ||| ||||| |
|
|
| T |
33522480 |
gcaccacatctcggatgatcttcaatgtgtcagacatatctct |
33522522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 153; Significance: 3e-81; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 50 - 258
Target Start/End: Original strand, 12024884 - 12025092
Alignment:
| Q |
50 |
cctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgca |
149 |
Q |
| |
|
|||||||||| | |||| | || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
12024884 |
cctaatcatagttaaccatgcttcctggcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccgggtatccgca |
12024983 |
T |
|
| Q |
150 |
tcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcagg |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| || ||||| ||| |
|
|
| T |
12024984 |
tcacctcctggacaatctcctctttagtcatctcggctttcctggccacaatatcgtcatctatatgcaccacatctcggatgatcatcagtgtgccaga |
12025083 |
T |
|
| Q |
250 |
catctctct |
258 |
Q |
| |
|
||||||||| |
|
|
| T |
12025084 |
catctctct |
12025092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 58 - 258
Target Start/End: Original strand, 54602557 - 54602757
Alignment:
| Q |
58 |
taatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcc |
157 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||| | ||| ||||||||||| |
|
|
| T |
54602557 |
taatcaaccctgctgcctagcatgcctcggccccctgcgccgcctggcaatctaatacgtaagggcagggcgaccagtaccaacaatctgcatcacctcc |
54602656 |
T |
|
| Q |
158 |
tggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctc |
257 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
54602657 |
tggacaatttcctctttagtcatctcggcttgcctaaccacaatatcgtcagctatatgcaccacatcccggatgatcgtcagtgtgtcaggcatctctc |
54602756 |
T |
|
| Q |
258 |
t |
258 |
Q |
| |
|
| |
|
|
| T |
54602757 |
t |
54602757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 49 - 247
Target Start/End: Original strand, 39388810 - 39389008
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
39388810 |
gcctaatcataatcaaccctactgcctagcatgccttagccccctacgccacctggcaatctgatacgtaaggtcagggcgaccagtaccggctatccgc |
39388909 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtca |
247 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
39388910 |
atcacctcctgaacaatctcctctttagtcatcccggcttgcctgaccacaatatcatcagttatatgtaccacatcccggatgatcgtcagtgtgtca |
39389008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 99 - 258
Target Start/End: Original strand, 16347123 - 16347282
Alignment:
| Q |
99 |
gcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccac |
198 |
Q |
| |
|
|||||| |||| |||| ||||||||| ||||||||||| | | |||| ||||||||||| |||||||||||||||||||||||| | ||||||||| |
|
|
| T |
16347123 |
gcctggcaatccgatatgtaagggcaaggcgaccagtagtgccaatccaaatcacctcctgaacaatctcctctttagtcatctcgccgctcctggccac |
16347222 |
T |
|
| Q |
199 |
aatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctct |
258 |
Q |
| |
|
|||||| |||||||| ||||||| || ||||||||||||| ||||||||| ||||||||| |
|
|
| T |
16347223 |
aatatcatcagctatctgcaccatattccggatgatcgtcagtgtgtcagacatctctct |
16347282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1043 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold1043
Description:
Target: scaffold1043; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 49 - 258
Target Start/End: Original strand, 2965 - 3174
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2965 |
gcctaatcataatcaaccctgttgcctagcacgcctcggccccctgcgccgcctggcaatctgatacgtaagggcagggcgaccagtaccggatatccgc |
3064 |
T |
|
| Q |
149 |
atcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcag |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| | ||||| ||| ||||||||| |
|
|
| T |
3065 |
atcacctcctggacaatctcctctttagtcatctcggtttgcctggctacaatatcatcagctatatgcaccacatctcagatgaccgttagtgtgtcag |
3164 |
T |
|
| Q |
249 |
gcatctctct |
258 |
Q |
| |
|
||||||||| |
|
|
| T |
3165 |
acatctctct |
3174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0079 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0079
Description:
Target: scaffold0079; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 99 - 258
Target Start/End: Complemental strand, 45738 - 45579
Alignment:
| Q |
99 |
gcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccac |
198 |
Q |
| |
|
|||||| |||| |||| ||||||||| ||||||||||| | | |||| ||||||||||| |||||||||||||||||||||||| | ||||||||| |
|
|
| T |
45738 |
gcctggcaatccgatatgtaagggcaaggcgaccagtagtgccaatccaaatcacctcctgaacaatctcctctttagtcatctcgccgctcctggccac |
45639 |
T |
|
| Q |
199 |
aatatcgtcagctatatgcaccacatcccggatgatcgtcggtgtgtcaggcatctctct |
258 |
Q |
| |
|
|||||| |||||||| ||||||| || ||||||||||||| ||||||||| ||||||||| |
|
|
| T |
45638 |
aatatcatcagctatctgcaccatattccggatgatcgtcagtgtgtcagacatctctct |
45579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0688 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0688
Description:
Target: scaffold0688; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 5552 - 5433
Alignment:
| Q |
49 |
gcctaatcataatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgc |
148 |
Q |
| |
|
||||||| ||||||| |||| ||||||| | |||||| |||||||| ||||||| | ||||| ||| |||||||||||||||| ||||| ||||||||| |
|
|
| T |
5552 |
gcctaataataatcagccctgctgcctaccttgcctctgccccctgcgccgcctagcaatctaataagtaagggcagggcgactagtactagctatccgc |
5453 |
T |
|
| Q |
149 |
atcacctcctggacaatctc |
168 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
5452 |
atcacctcctggacgatctc |
5433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 29445 - 29317
Alignment:
| Q |
58 |
taatcaaccctactgcctagcatgcctcggccccctgtgccgcctggtaatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcc |
157 |
Q |
| |
|
|||| |||||| ||||||| |||||| ||||||||||| || || |||||||||| ||||||||||||||||||||| | | ||||| |||| |||| |
|
|
| T |
29445 |
taattaaccctgctgcctacgatgcctatgccccctgtgctgcatgacaatctgatacataagggcagggcgaccagtactgccaatccggatcatctcc |
29346 |
T |
|
| Q |
158 |
tggacaatctcctctttagtcatctcggc |
186 |
Q |
| |
|
|| || | ||||||||||||||||||||| |
|
|
| T |
29345 |
tgcacgagctcctctttagtcatctcggc |
29317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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