View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6553_low_26 (Length: 238)
Name: NF6553_low_26
Description: NF6553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6553_low_26 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 1831953 - 1831733
Alignment:
| Q |
18 |
gatatcgtttttcttcgctcgcgggtttgtgaagacgggtttaggggatagaattgctacttattttgtgaaatggatggggaaaagtactttaggactt |
117 |
Q |
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| T |
1831953 |
gatatcgtttttcttcgctcgcgggtttgtgaagacgggtttaggggatagaattgctacttattttgtgaaatggatggggaaaagtactttaggactt |
1831854 |
T |
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| Q |
118 |
tcttatggtttgacatttagtgaagttcttattgcacctgctatgcctagtactactgctagagctggtggtgttttcttgcctattattaagtcacttt |
217 |
Q |
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| T |
1831853 |
tcttatggtttgacatttagtgaagttcttattgcacctgctatgcctagtactactgctagagctggtggtgttttcttgcctattattaagtcacttt |
1831754 |
T |
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| Q |
218 |
cactctctgctgggagtgagc |
238 |
Q |
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||||||||||||||||||||| |
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| T |
1831753 |
cactctctgctgggagtgagc |
1831733 |
T |
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