View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6553_low_7 (Length: 397)

Name: NF6553_low_7
Description: NF6553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6553_low_7
NF6553_low_7
[»] chr1 (10 HSPs)
chr1 (1-387)||(18253187-18253564)
chr1 (1-188)||(18531376-18531563)
chr1 (1-193)||(27309410-27309603)
chr1 (5-191)||(27130257-27130443)
chr1 (12-182)||(16357900-16358072)
chr1 (1-191)||(21169283-21169459)
chr1 (1-192)||(9075750-9075927)
chr1 (3-170)||(22640728-22640899)
chr1 (93-183)||(25662281-25662370)
chr1 (91-187)||(9915730-9915825)
[»] chr6 (15 HSPs)
chr6 (1-221)||(17690270-17690490)
chr6 (1-237)||(29310047-29310282)
chr6 (1-221)||(27297816-27298036)
chr6 (1-196)||(27380082-27380277)
chr6 (1-196)||(27470465-27470660)
chr6 (1-191)||(29317006-29317196)
chr6 (1-193)||(27278524-27278716)
chr6 (1-193)||(27303415-27303607)
chr6 (1-192)||(11652855-11653046)
chr6 (1-78)||(17683430-17683507)
chr6 (88-202)||(16393328-16393442)
chr6 (3-86)||(18336748-18336831)
chr6 (1-182)||(28755124-28755305)
chr6 (49-124)||(2670013-2670091)
chr6 (91-125)||(19346305-19346339)
[»] chr3 (29 HSPs)
chr3 (1-240)||(15606239-15606479)
chr3 (1-240)||(10578141-10578382)
chr3 (1-198)||(13212457-13212654)
chr3 (1-193)||(15599742-15599934)
chr3 (1-191)||(8491541-8491731)
chr3 (1-191)||(6111257-6111446)
chr3 (1-191)||(13258702-13258892)
chr3 (1-191)||(13517966-13518156)
chr3 (1-189)||(10571427-10571616)
chr3 (1-191)||(16481318-16481508)
chr3 (1-191)||(17780025-17780213)
chr3 (1-191)||(19081326-19081514)
chr3 (1-221)||(15356413-15356636)
chr3 (1-191)||(15341077-15341269)
chr3 (33-191)||(13691871-13692029)
chr3 (1-191)||(18538152-18538342)
chr3 (1-182)||(1646363-1646546)
chr3 (33-191)||(18534826-18534984)
chr3 (1-182)||(23014210-23014393)
chr3 (33-191)||(32055274-32055433)
chr3 (1-191)||(16201376-16201566)
chr3 (93-191)||(12564395-12564493)
chr3 (81-186)||(6288184-6288288)
chr3 (3-87)||(25801352-25801436)
chr3 (78-125)||(17196702-17196749)
chr3 (2-49)||(17196750-17196797)
chr3 (127-191)||(25801443-25801508)
chr3 (91-187)||(47699511-47699607)
chr3 (1-40)||(32056056-32056095)
[»] scaffold0234 (2 HSPs)
scaffold0234 (1-237)||(10024-10262)
scaffold0234 (1-192)||(1177-1369)
[»] chr4 (25 HSPs)
chr4 (1-237)||(18263369-18263607)
chr4 (1-191)||(28392002-28392192)
chr4 (1-231)||(26964728-26964957)
chr4 (1-221)||(5708494-5708715)
chr4 (1-192)||(5715130-5715320)
chr4 (1-236)||(19925551-19925785)
chr4 (1-192)||(10620167-10620358)
chr4 (1-188)||(20579275-20579462)
chr4 (1-189)||(18270230-18270419)
chr4 (1-191)||(8859349-8859540)
chr4 (1-191)||(869778-869968)
chr4 (1-191)||(55613865-55614055)
chr4 (1-192)||(26971622-26971811)
chr4 (1-182)||(19919375-19919556)
chr4 (1-192)||(10825188-10825377)
chr4 (1-191)||(4425468-4425665)
chr4 (6-204)||(10676407-10676609)
chr4 (6-204)||(10890047-10890249)
chr4 (3-191)||(47387788-47387978)
chr4 (28-176)||(5667043-5667192)
chr4 (1-240)||(10627225-10627440)
chr4 (3-191)||(35224711-35224903)
chr4 (94-188)||(49066009-49066103)
chr4 (53-87)||(27031782-27031816)
chr4 (112-169)||(55992914-55992971)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-240)||(5006-5246)
[»] scaffold0657 (1 HSPs)
scaffold0657 (1-198)||(3874-4071)
[»] chr7 (15 HSPs)
chr7 (1-240)||(11541791-11542030)
chr7 (1-191)||(29328945-29329135)
chr7 (1-236)||(12739699-12739933)
chr7 (1-187)||(2652852-2653038)
chr7 (1-191)||(12752016-12752206)
chr7 (1-193)||(15153625-15153817)
chr7 (1-191)||(11534921-11535112)
chr7 (2-188)||(9978986-9979174)
chr7 (2-191)||(18562191-18562385)
chr7 (3-189)||(18256679-18256866)
chr7 (67-237)||(11557029-11557199)
chr7 (3-125)||(30926254-30926378)
chr7 (93-187)||(7748213-7748306)
chr7 (72-116)||(22947653-22947697)
chr7 (94-128)||(30918034-30918068)
[»] scaffold0203 (1 HSPs)
scaffold0203 (1-204)||(29033-29234)
[»] scaffold0433 (1 HSPs)
scaffold0433 (1-192)||(8265-8456)
[»] chr5 (10 HSPs)
chr5 (1-236)||(24694275-24694510)
chr5 (4-236)||(24701044-24701276)
chr5 (1-182)||(18565324-18565506)
chr5 (2-161)||(19713396-19713549)
chr5 (49-191)||(28718819-28718960)
chr5 (3-192)||(39539688-39539880)
chr5 (93-187)||(938385-938477)
chr5 (91-184)||(22546232-22546323)
chr5 (91-171)||(17297875-17297953)
chr5 (91-171)||(17313950-17314029)
[»] scaffold1199 (1 HSPs)
scaffold1199 (1-191)||(282-472)
[»] scaffold0213 (1 HSPs)
scaffold0213 (1-192)||(4397-4588)
[»] scaffold0390 (2 HSPs)
scaffold0390 (1-204)||(12771-12975)
scaffold0390 (1-149)||(5811-5959)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-191)||(19470-19660)
[»] chr8 (12 HSPs)
chr8 (1-191)||(15327380-15327569)
chr8 (1-191)||(15507749-15507938)
chr8 (2-191)||(6095304-6095492)
chr8 (1-189)||(21941824-21942012)
chr8 (1-191)||(22172642-22172836)
chr8 (13-185)||(28549209-28549376)
chr8 (4-158)||(24644108-24644263)
chr8 (3-185)||(24795853-24796035)
chr8 (74-191)||(29230589-29230706)
chr8 (95-191)||(27660698-27660795)
chr8 (33-117)||(17089259-17089347)
chr8 (160-240)||(24636994-24637073)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-188)||(26370-26557)
[»] scaffold0705 (1 HSPs)
scaffold0705 (15-221)||(7466-7675)
[»] chr2 (5 HSPs)
chr2 (1-178)||(22790704-22790883)
chr2 (3-191)||(18620995-18621184)
chr2 (3-191)||(41664924-41665115)
chr2 (3-189)||(27353517-27353696)
chr2 (49-124)||(12298996-12299072)
[»] scaffold0063 (1 HSPs)
scaffold0063 (2-191)||(6686-6877)
[»] scaffold0008 (1 HSPs)
scaffold0008 (2-204)||(229229-229436)
[»] scaffold1303 (1 HSPs)
scaffold1303 (1-140)||(892-1031)
[»] scaffold0032 (1 HSPs)
scaffold0032 (3-191)||(107107-107295)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-191)||(87868-88059)
[»] scaffold0502 (1 HSPs)
scaffold0502 (7-171)||(209-373)
[»] scaffold1383 (1 HSPs)
scaffold1383 (157-207)||(4-54)


Alignment Details
Target: chr1 (Bit Score: 319; Significance: 1e-180; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 18253187 - 18253564
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18253187 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 18253286  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18253287 gtgattaataatttaatcaagatccgtttcaatgggatttcttctgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 18253386  T
Q  201 gagcattggttttggttaaattattgaattcgaatctgttattgattgtctgccatgattagaattcaccatttttgaatatgattcaaatgggtgcttg 300  Q
    ||         ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  18253387 ga---------ttggttaaattattgaattcgaatctgttattgtttgtctgccatgattagaattcaccgtttttgaatatgattcaaatggatgcttg 18253477  T
Q  301 ttgtataatgtttgggatcaaattgtttgatcgctattatttgtattgttcatatacaaatcgcacatctgagttatatgttgattt 387  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  18253478 ttatataatgtttgggatcaaattgtttgatcgctattatttgtatggttcatatacaaatcgcacaactgatttatatgttgattt 18253564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 18531563 - 18531376
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18531563 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctactcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 18531464  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccct 188  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18531463 gtgattaatgatttaatcaagatccgtttcattgggatttcttccgcaaagaggattaaaattttgaaaaatccctcttaaaatccct 18531376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 27309603 - 27309410
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27309603 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttttgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 27309504  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaa-cccctcttaaaatcccttcagt 193  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27309503 gtgattaatgatttaatcaatatttgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaaccccctcttaaaatcccttcagt 27309410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 5 - 191
Target Start/End: Complemental strand, 27130443 - 27130257
Alignment:
Q  5 gctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtga 104  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27130443 gctttgctcgtgatcagaaagatttatgctacaaaggttctgctcttcaagaggtaatcacatgaatcttaaagtgtttaagtttctgtttgatttgtga 27130344  T
Q  105 ttaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27130343 ttaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcctttca 27130257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 16358072 - 16357900
Alignment:
Q  12 tcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtgattaatga 111  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16358072 tcgtgatcataaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaaatttctgtttgatttgtgattaatga 16357973  T
Q  112 tttaatcaagatccgtttcaatgggatttcttccgcaaagaggat--taaaattttgaaaaacccctcttaaa 182  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||  ||||||||||||||||| ||||||||    
T  16357972 tttaatcaagatccgtttcaatgagatttgttccgctaagaggattataaaattttgaaaaacctctcttaaa 16357900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 21169459 - 21169283
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||    
T  21169459 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaaa---------------tttctgtttgattt 21169375  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaa-acccctcttaaaatcccttca 191  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  21169374 gtgattaatgatttaatcaagatccttttcaatgggatttcttccgcaaagaggatcaaaattttgaaaacccccctcttaaaatcccttca 21169283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 9075927 - 9075750
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||                ||||||||    
T  9075927 ctttgctttgctcgtgatcagaaataattcttctacaaagattctgctcttcaagaggtaaacacatgaatcgtaa----------------tttgattt 9075844  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggat--taaaattttgaaaaacccctcttaaaatcccttcag 192  Q
    |||||||||  ||||||||||| ||||||||||| ||||| |||||| ||||||||  ||||||||||||||||||||||| ||||||||||||    
T  9075843 gtgattaattctttaatcaagacccgtttcaatgagatttgttccgctaagaggattataaaattttgaaaaacccctctttaaatcccttcag 9075750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 22640899 - 22640728
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagt-----ttctgtttga 97  Q
    |||||||||||||||||||||| | |||| ||||||||||||||  |||||||||||||||||||||  ||||||||||||||||     || || || |    
T  22640899 ttgctttgctcgtgatcagaaacaattctgctacaaaggttctgtgcttcaagaggtaaacacatgatccttaaagtgtttaagtatgtgttttgattaa 22640800  T
Q  98 tttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaa 170  Q
    ||| |||||||||||||||||||||||| ||| |||||||||| |||||| |||| |||||||||||||||||    
T  22640799 tttatgattaatgatttaatcaagatccattttaatgggatttgttccgctaaga-gattaaaattttgaaaa 22640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 25662281 - 25662370
Alignment:
Q  93 tttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaa 183  Q
    |||||||||||||||||||||||||||| ||||| ||||  ||||||| |||||| || |  || ||||||||||||||||||||||||||    
T  25662281 tttgatttgtgattaatgatttaatcaatatccg-ttcatcgggatttattccgctaacaaaatgaaaattttgaaaaacccctcttaaaa 25662370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 9915825 - 9915730
Alignment:
Q  91 tgtttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccc 187  Q
    ||||||||||||||||||| ||||||| |||| || || ||   |||||| |||||| || ||||||||||||||||||| ||||| || |||||||    
T  9915825 tgtttgatttgtgattaataatttaattaagacccatt-catcaggatttattccgctaaaaggattaaaattttgaaaatcccctattgaaatccc 9915730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 17690490 - 17690270
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17690490 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 17690391  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17690390 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 17690291  T
Q  201 gagcattggttttggttaaat 221  Q
    |||||| |||| || ||||||    
T  17690290 gagcatcggttgtgattaaat 17690270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 29310047 - 29310282
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29310047 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 29310146  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29310147 gtgattaatgatttaatcaagatccgtttcattgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 29310246  T
Q  201 gagcattggttttggttaaattattgaattcgaatct 237  Q
    ||||  ||||| || |||||| ||| |||||||||||    
T  29310247 gagc-ctggttctgattaaatcattaaattcgaatct 29310282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 27297816 - 27298036
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27297816 ctttgctttgctcgtgattagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacgtgaatcttaaagtgtttaagtttctgtttgattt 27297915  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27297916 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaatattttgaaaaacccctcttaaaatcccttcagtggtatca 27298015  T
Q  201 gagcattggttttggttaaat 221  Q
    |||||| |||| || ||||||    
T  27298016 gagcatcggttgtgattaaat 27298036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 27380277 - 27380082
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27380277 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 27380178  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggt 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27380177 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaatttttgaaaaacccctcttaaaatcccttcagtggt 27380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 27470660 - 27470465
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27470660 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 27470561  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggt 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27470560 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaatttttgaaaaacccctcttaaaatcccttcagtggt 27470465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 29317006 - 29317196
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29317006 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 29317105  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29317106 gtgattaatgatttaatcaagatccgtttcattgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 29317196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 27278524 - 27278716
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27278524 ctttgctttgctcgtgattagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacgtgaatcttaaagtgtttaagtttctgtttgattt 27278623  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagt 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27278624 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaatattttgaaaaacccctcttaaaatcccttcagt 27278716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 27303415 - 27303607
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27303415 ctttgctttgctcgtgattagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacgtgaatcttaaagtgtttaagtttctgtttgattt 27303514  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagt 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27303515 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaatattttgaaaaacccctcttaaaatcccttcagt 27303607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 11652855 - 11653046
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11652855 ctttgctttactcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 11652954  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcag 192  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11652955 gtgattaatgatttaatcaagattcgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaaaccctcttaaaatcccttcag 11653046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17683507 - 17683430
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaag 78  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17683507 ctttgctttgctcgtgatcagaaatatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaag 17683430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 16393442 - 16393328
Alignment:
Q  88 ttctgtttgatttgtgattaatgatttaatcaagatccgttt-caatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcc 186  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| | |||| |||||||| ||| ||||||||||| ||||| |||||||    
T  16393442 ttctggttgatttgtgattaatgatttaataaagatccgttttcaatgagatttgtaccgctaagaggat-aaatttttgaaaaactcctctcaaaatcc 16393344  T
Q  187 cttcagtggtatcaga 202  Q
    ||||||||||||||||    
T  16393343 cttcagtggtatcaga 16393328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 18336748 - 18336831
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaag 86  Q
    |||||||||| ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18336748 ttgctttgcttgtgatcagaaacatttatgctacaaaggttctgctcttcaagaggtaaacacatgaattttaaagtgtttaag 18336831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 28755305 - 28755124
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatc-ttaaagtgtttaagtttctgtttgatt 99  Q
    ||||| |||||||||||||||||| | || | | |  ||||||||||  |||||||||||||||| |||||| ||||| ||||||| | | | ||| |||    
T  28755305 ctttgatttgctcgtgatcagaaacaattatgcaa--aaggttctgcgattcaagaggtaaacacgtgaatccttaaaatgtttaattatgtatttaatt 28755208  T
Q  100 tgtg-attaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaa 182  Q
    | |  |||| |||||||||||||||| |||||| ||| |||| |||||| |||| |||||||||||||||||| ||||||||||    
T  28755207 tttttattagtgatttaatcaagatctgtttcagtggaatttgttccgccaagatgattaaaattttgaaaaatccctcttaaa 28755124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 2670013 - 2670091
Alignment:
Q  49 cttcaagaggtaaacacatgaatc-ttaaagtgtttaagtttctgt--ttgatttgtgattaatgatttaatcaagatc 124  Q
    |||||||| |||||||| | |||| ||||||||||||||| | |||  ||||||| ||||||| |||||||||||||||    
T  2670013 cttcaagatgtaaacacgtaaatccttaaagtgtttaagtatatgtgtttgatttttgattaacgatttaatcaagatc 2670091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 125
Target Start/End: Complemental strand, 19346339 - 19346305
Alignment:
Q  91 tgtttgatttgtgattaatgatttaatcaagatcc 125  Q
    |||||||||||||||||||| ||||||||||||||    
T  19346339 tgtttgatttgtgattaatggtttaatcaagatcc 19346305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 15606479 - 15606239
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15606479 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 15606380  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15606379 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 15606280  T
Q  201 gagcat-tggttttggttaaattattgaattcgaatctgtt 240  Q
    ||||||  |||| |  |||||| ||||||||||||||||||    
T  15606279 gagcatccggttatcattaaatcattgaattcgaatctgtt 15606239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10578382 - 10578141
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10578382 ctttgttttgctcgtgatcagaaaaatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 10578283  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccctt-cagtggtatc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10578282 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttccagtggtatc 10578183  T
Q  200 agagcat-tggttttggttaaattattgaattcgaatctgtt 240  Q
    ||||||| |||||||  |||||| |||  |||||||||||||    
T  10578182 agagcatctggttttcattaaatcattatattcgaatctgtt 10578141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 13212457 - 13212654
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13212457 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 13212556  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtat 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13212557 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggattaaaattttgaaaaactcctcttaaaatcccttcagtggtat 13212654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 15599934 - 15599742
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15599934 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 15599835  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15599834 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagt 15599742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 8491541 - 8491731
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8491541 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 8491640  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8491641 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaatttttgaaaaacccctcttaaaatcccttca 8491731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 6111257 - 6111446
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6111257 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 6111356  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6111357 gtgattaatgatttaatcaacatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaa-ccctcttaaaatcccttca 6111446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 13258702 - 13258892
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13258702 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctactcttcaagaggtaaacacatgaatcttaaaatgtttaagtttctgtttgattt 13258801  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13258802 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 13258892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 13517966 - 13518156
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13517966 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgcttttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgattgattt 13518065  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  13518066 gtgattaatgatttaatcaagatccgtttcaatgggatttcttctgcaaagaggaataaaattttgaaaaacccctcttaaaatcccttca 13518156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 10571616 - 10571427
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaa-gtgtttaagtttctgtttgatt 99  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10571616 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaaagtgtttaagtttctgtttgatt 10571517  T
Q  100 tgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccctt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10571516 tgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccctt 10571427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 16481508 - 16481318
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  16481508 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttttatttgattt 16481409  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  16481408 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggatttaaattttgaaaaacccctcttaaaatcccttca 16481318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 17780213 - 17780025
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17780213 ctttggtttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatctttaagtgtttaagtttctgtttgattt 17780114  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17780113 gtgattaatgatttaatcaagatccgtttc-atgggatttcttccgcaaagaggattaaaattttg-aaaacccctcttaaaatcccttca 17780025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 19081514 - 19081326
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19081514 ctttggtttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatctttaagtgtttaagtttctgtttgattt 19081415  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19081414 gtgattaatgatttaatcaagatccgtttc-atgggatttcttccgcaaagaggattaaaattttg-aaaacccctcttaaaatcccttca 19081326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 15356636 - 15356413
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15356636 ctttgctttgctcatgatcagaaatattttttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgattgattt 15356537  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggat--taaaattttgaaaaacccctcttaaaatcccttcagtggtat 198  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||  |||||||| |||||||| ||||||||||||||||||||||||    
T  15356536 gtgattaatgatttaatcaagatccgtttcaatgagatttgttccgcttagaggattataaaatttggaaaaacctctcttaaaatcccttcagtggtat 15356437  T
Q  199 cagagcat-tggttttggttaaat 221  Q
    |||||||| ||||| |||||||||    
T  15356436 cagagcatctggttctggttaaat 15356413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 15341269 - 15341077
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15341269 ctttgctttgctcgtgatcagaaatattttttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgattgattt 15341170  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggat--taaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  |||||||  |||||||| |||||||| |||||||||||||||||    
T  15341169 gtgattaatgatttaatcaagatccgtttcaatgggatttgttccgcttagaggattataaaatttggaaaaacctctcttaaaatcccttca 15341077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 13691871 - 13692029
Alignment:
Q  33 ctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtgattaatgatttaatcaagatccgtttcaa 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13691871 ctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtatgatttgtgattaatgatttaatcaagatccgtttcaa 13691970  T
Q  133 tgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13691971 tgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttcaaatcccttca 13692029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 18538152 - 18538342
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  18538152 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagagataaacacatgaatcttaaagtgtttaagtttctatttaattt 18538251  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||| | |||||||||||||||||    
T  18538252 gtgattaatgatttaatcaagatccgtttcaatgagatttcttctgtaaagaggattaaaattttgaaaaatctctcttaaaatcccttca 18538342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 1646546 - 1646363
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1646546 ctttgctttgctcgtgattagaaatatttattctacaaaggttctgctcttcaagaggtaaacacattaatcttaaagtgtttaagtttctgtttgattt 1646447  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggat--taaaattttgaaaaacccctcttaaa 182  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||| ||||||||    
T  1646446 gtgattaatgatttaatcaagatccgtttcaatgggatttgttccgctaagaggattataaaattttgaaaaacctctcttaaa 1646363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 18534826 - 18534984
Alignment:
Q  33 ctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtgattaatgatttaatcaagatccgtttcaa 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18534826 ctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgatttgtgattaatgatttaatcaagatccgtttcaa 18534925  T
Q  133 tgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    || ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||    
T  18534926 tgagatttcttctgtaaagaggattaaaattttgaaaaatccctcttaaaatcccttca 18534984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 23014393 - 23014210
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23014393 ctttgctttgctcgtgatcataaatatttcttatacaaaggttctgttcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 23014294  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggat--taaaattttgaaaaacccctcttaaa 182  Q
    |||||||||||||||||||||||  |||||||||||| || |||||| ||||||||  ||||||||||||||||| ||||||||    
T  23014293 gtgattaatgatttaatcaagatatgtttcaatgggaattgttccgctaagaggattataaaattttgaaaaacctctcttaaa 23014210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 33 - 191
Target Start/End: Complemental strand, 32055433 - 32055274
Alignment:
Q  33 ctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtgattaatgatttaatcaagatccgtttcaa 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  32055433 ctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttcaatttctatttgatttgtgattaatgatttaatcaagatccgtttcaa 32055334  T
Q  133 tgggatttcttccgcaaagaggat--taaaattttgaaaaacccctcttaaaatcccttca 191  Q
    ||| ||||||||||||||||||||  ||||||||||||||||| ||||| |||||||||||    
T  32055333 tggaatttcttccgcaaagaggattataaaattttgaaaaacctctctt-aaatcccttca 32055274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 16201376 - 16201566
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||| |||||||||||||| |||| | ||||||||||||| ||||| | ||||||||||||| | ||||||| ||||||||||| ||||||||||    
T  16201376 ctttgcttttctcgtgatcagaaacatttatgctacaaaggttctactctttaggaggtaaacacattactcttaaaatgtttaagtttttgtttgattt 16201475  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||| |||||||||||||||||| |||||  |||||||||||| ||| |||||||||||||||||||||||||  ||||||| ||||||||    
T  16201476 gtgagtaatgatttaatcaagattcgttttcatgggatttctttcgctaagaggattaaaattttgaaaaacctttcttaaattcccttca 16201566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 12564395 - 12564493
Alignment:
Q  93 tttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12564395 tttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 12564493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 6288288 - 6288184
Alignment:
Q  81 tttaagtttctgtttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctctta 180  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||||| ||  | ||||| |||  | |||||||||||||||||||||||||||| |||    
T  6288288 tttaagttgttgtttaatttgtgattaatgatttaatcaagatccgtt-catcgagatttattctactaagaggattaaaattttgaaaaacccctttta 6288190  T
Q  181 aaatcc 186  Q
    ||||||    
T  6288189 aaatcc 6288184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 25801352 - 25801436
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagt 87  Q
    ||||||||||||| |||||||| | |||| ||||||||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  25801352 ttgctttgctcgtaatcagaaacaattctgctacaaaggttatgcgcttcaagaggtaaacacatgaatctttaaatgtttaagt 25801436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 17196749 - 17196702
Alignment:
Q  78 gtgtttaagtttctgtttgatttgtgattaatgatttaatcaagatcc 125  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  17196749 gtgtttaagtttttgtttgatttgtgattaatgatttaatcaagatcc 17196702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 17196797 - 17196750
Alignment:
Q  2 tttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctc 49  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  17196797 tttgctttactcgtgatcagaaatatttcttctacaaaggttctgctc 17196750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 25801443 - 25801508
Alignment:
Q  127 tttcaatgggatttcttccgcaaagaggattaaaattttg-aaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||| |||| | |||||||||||||||||| ||||||||||||| |||||||||||    
T  25801443 tttcaatgggatttgttccactaagaggattaaaattttgaaaaaacccctctttaaatcccttca 25801508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 47699607 - 47699511
Alignment:
Q  91 tgtttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaa-acccctcttaaaatccc 187  Q
    |||||||||| |||||||||| |||||||||| |||| | | ||| |||| |||| | |||||||||||||||| ||||| ||||||||| |||||||    
T  47699607 tgtttgatttatgattaatgacttaatcaagacccgtct-attggaatttattcctctaagaggattaaaatttggaaaatacccctcttgaaatccc 47699511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 32056095 - 32056056
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaag 40  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  32056095 ctttgctttgctcgtgatcagaaagatttctgctacaaag 32056056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 10262 - 10024
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10262 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcgtcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 10163  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttga-aaaacccctcttaaaatcccttcagtggtatc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10162 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaaacccctcttaaaatcccttcagtggtatc 10063  T
Q  200 agagcat-tggttttggttaaattattgaattcgaatct 237  Q
    ||||| | |||||||| |||||| ||| | |||||||||    
T  10062 agagcttctggttttgattaaatcattaagttcgaatct 10024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 1369 - 1177
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  1369 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcgtcaagaggtaaacacatgaatcttaaagtgtttaagtttctaattgattt 1270  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttga-aaaacccctcttaaaatcccttcag 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1269 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaaacccctcttaaaatcccttcag 1177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 18263369 - 18263607
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18263369 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcgtcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 18263468  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttg-aaaaacccctcttaaaatcccttcagtggtatc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18263469 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaaacccctcttaaaatcccttcagtggtatc 18263568  T
Q  200 agagcat-tggttttggttaaattattgaattcgaatct 237  Q
    ||||| | |||||||| |||||| ||| | |||||||||    
T  18263569 agagcttctggttttgattaaatcattaagttcgaatct 18263607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 28392192 - 28392002
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28392192 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaatcttaaagtgtttaagtttctgtttgattt 28392093  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28392092 gtgattaatgatttaatcaagatccgtttcaatgagatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 28392002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 26964728 - 26964957
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26964728 ctttgctttgctcgtgatcagaaagatttatgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 26964827  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26964828 gtgattaatgatttaatcaagatcggtttcaatgggatttcttccgc--agaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 26964925  T
Q  201 gagca-ttggttttggttaaattattgaattc 231  Q
    ||||| ||||||| | |||||| ||| |||||    
T  26964926 gagcacttggtttcgattaaatcattaaattc 26964957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5708494 - 5708715
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5708494 ctttgctttgctcgtgatcagaaatatttcttatacaaagattctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 5708593  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaa--agaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5708594 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccacaaagagaggattaaaattttg-aaaacccctcttaaaatcccttcagtggtat 5708692  T
Q  199 cagagcattggttttggttaaat 221  Q
    |||||||| |||| || ||||||    
T  5708693 cagagcatcggttgtgattaaat 5708715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 5715130 - 5715320
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5715130 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 5715229  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcag 192  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5715230 gtgattaatgatttaatcaagatccgtttcaatgagatttcttccgcaaagaggattaaaattttg-aaaacccctcttaaaatcccttcag 5715320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 19925785 - 19925551
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19925785 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttgtgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 19925686  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| |||| || |||||||| |||||||||||    
T  19925685 gtgattaatgatttaatcaagatccgttttattgggatttcttccgcaaagaggattaaatttttgaaaaatccct-tttaaatccctacagtggtatca 19925587  T
Q  201 gagcattggttttggttaaattattgaattcgaatc 236  Q
    |||| | |||| || |||||| ||||||||||||||    
T  19925586 gagcttcggttatgattaaatcattgaattcgaatc 19925551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 10620358 - 10620167
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10620358 ctttgctttgctcgtgatcagaaagatttctgctacagaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 10620259  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcag 192  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10620258 gtgattaatgatttaatcaagatctgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcag 10620167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 20579462 - 20579275
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20579462 ctttgctttgctcgtgatcagaattatttcttctacaaaggttctactcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 20579363  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccct 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20579362 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaatttttgaaaaacccctcttaaaatccct 20579275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 18270230 - 18270419
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18270230 ctttgctttgctcgtgatcagaaatatttcttctataaaggttctgctcgtcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 18270329  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttg-aaaaacccctcttaaaatccctt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18270330 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaaacccctcttaaaatccctt 18270419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 8859349 - 8859540
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8859349 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 8859448  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaa-cccctcttaaaatcccttca 191  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||    
T  8859449 gtgattaatgatttaatcaagatccgtttcaatgggatttctttcggaaagaggattaaaattttgaaaaaccccctcttaaaatcccttca 8859540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 869778 - 869968
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  869778 ctttgctttgctcgtgatcagaaatatttcttctacaaatgttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 869877  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  869878 gtgattaatgatttaatcaagatccgtttcaataggatttcttccgcaaagagaattaaatttttgaaaaatccctcttaaaatcccttca 869968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 55613865 - 55614055
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  55613865 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttttatttgattt 55613964  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  55613965 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggatttaaattttgaaaaacccctcttaaaatcccttca 55614055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 26971622 - 26971811
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26971622 ctttgctttgctcgtgatcagaaagatttatgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 26971721  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcag 192  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  26971722 gtgattaatgatttaatcaagatcggtttcaatgggatttcttccgc--agaggattaaaattttgaaaaacccctcttaaaatcccttcag 26971811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 19919556 - 19919375
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19919556 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttgtgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 19919457  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaa 182  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  19919456 gtgattaatgatttaatcaagatccgtttcattgggatttcttccgcaaagaggattaaatttttgaaaaatcccttttaaa 19919375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 10825377 - 10825188
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  10825377 ctttgctttgctcgtgatcagaaagatttctgctacagaggttctgctcttcaagaggtaaacacatgaat--taaagtgtttaagtttctgtttgattt 10825280  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcag 192  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10825279 gtgattaatgatttaatcaagatctgtttcaatgggatttattccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcag 10825188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 4425665 - 4425468
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatga-------atcttaaagtgtttaagtttctgt 93  Q
    |||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  4425665 ctttgctttgctcgtgattagaaatatttcttctacaaaagttcagctcttcaagaggtaaacacatgatgacataatcttaaagtgtttaagtttctgt 4425566  T
Q  94 ttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggatta-aaattttgaaaaacccctcttaaaatcccttca 191  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||  ||||||||| ||| ||||||||||| ||||| |||||||||||    
T  4425565 ttgatttgtgattaatgatttaatcaagatctgtttcaatgagatttgttccgcttagaggattataaaatttgaaaaacctctctt-aaatcccttca 4425468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 6 - 204
Target Start/End: Complemental strand, 10676609 - 10676407
Alignment:
Q  6 ctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtgat 105  Q
    ||||||||||||||||||| | || | ||||||||||||| |||||||||||||||||||||||||    |||||||||||||| |||||||||||||||    
T  10676609 ctttgctcgtgatcagaaacaattatgctacaaaggttcttctcttcaagaggtaaacacatgaattcgtaagtgtttaagtttgtgtttgatttgtgat 10676510  T
Q  106 taatgatttaatcaaga-tccg-tttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca--gtggtatcag 201  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| ||||||||||||| ||||||||| ||||||| |||||||||||  ||||||||||    
T  10676509 taatgatttaatcaagattccgttttcaatgggatttgttccgctaagaggattaaaaatttgaaaaaaccctctttaaatcccttcaatgtggtatcag 10676410  T
Q  202 agc 204  Q
    |||    
T  10676409 agc 10676407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 6 - 204
Target Start/End: Complemental strand, 10890249 - 10890047
Alignment:
Q  6 ctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtgat 105  Q
    ||||||||||||||||||| | || | ||||||||||||| |||||||||||||||||||||||||    |||||||||||||| |||||||||||||||    
T  10890249 ctttgctcgtgatcagaaacaattatgctacaaaggttcttctcttcaagaggtaaacacatgaattcgtaagtgtttaagtttgtgtttgatttgtgat 10890150  T
Q  106 taatgatttaatcaaga-tccg-tttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca--gtggtatcag 201  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| ||||||||||||| ||||||||| ||||||| |||||||||||  ||||||||||    
T  10890149 taatgatttaatcaagattccgttttcaatgggatttgttccgctaagaggattaaaaatttgaaaaaaccctctttaaatcccttcaatgtggtatcag 10890050  T
Q  202 agc 204  Q
    |||    
T  10890049 agc 10890047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 47387978 - 47387788
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaaga-ggtaaacacatgaat-cttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||| | || | |||||||||||||||||||||  | ||||||||||||||| |||||| || |||| | | |||| ||| |    
T  47387978 ttgctttgctcgtgatcagaaacaattatgctacaaaggttctgctcttcatcaaggtaaacacatgaattcttaaattgcttaaatatgtgttagatgt 47387879  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47387878 gtgattaatgatttaatcaagatccgtttcaatgagatttcttccgcaaagaggattaaaattttgaaaaacccctcttgaaatcccttca 47387788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 5667192 - 5667043
Alignment:
Q  28 ttcttctacaaaggttctgctcttcaagaggtaaacacatgaatc-ttaaagtgtttaagtttctgtttgatttgtgattaatgatttaatcaagatccg 126  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  5667192 ttctactacaaaggttctgctcttcaagaggtaaacacatgaatccttaaattgtttaagtatgtgtttgatttgtgattaatgatttaatcaagatccg 5667093  T
Q  127 tttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccct 176  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||| ||||    
T  5667092 tttcaataagatttcttccgcagagagcattaaaattttgaaaaatccct 5667043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10627440 - 10627225
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagttt-ctgtttgatt 99  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||      ||||||||||||| ||||||||||    
T  10627440 ctttgctttgctcgtgatcagaaagatttctgctacagaggttctgctcttcaagaggtaaacacatgaa------agtgtttaagttttctgtttgatt 10627347  T
Q  100 tgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatc 199  Q
    ||||||||||||||||||||                  |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10627346 tgtgattaatgatttaatca------------------tttcttacgcaaa-aggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatc 10627266  T
Q  200 agagcattggttttggttaaattattgaattcgaatctgtt 240  Q
    ||||| | |||| || |||||| ||||||||||||| ||||    
T  10627265 agagcttcggttatgattaaatcattgaattcgaatatgtt 10627225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 35224711 - 35224903
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgt 102  Q
    |||||||||||||||||||||| |  ||  |||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  35224711 ttgctttgctcgtgatcagaaacaactcggctacaaaatttctgcgcttcaagaggtaaacacatgaat-ttaaagtgtttaagtttgtgtttgatttgt 35224809  T
Q  103 gattaatgatttaatcaagatccgtttc-----aatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||| |||||||||||||||||||||||     |||||||||| |||||   ||||||||||||||||||||| |||||||| |||||||||||    
T  35224810 gattgatgatttaatcaagatccgtttcattttaatgggatttattccgttgagaggattaaaattttgaaaaccccctcttgaaatcccttca 35224903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 49066009 - 49066103
Alignment:
Q  94 ttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaa-ttttgaaaaacccctcttaaaatccct 188  Q
    |||||||||||||||||||||||||||||| |||||  | | ||||||||||   ||||| ||||||| ||||||| ||||||| || ||||||||    
T  49066009 ttgatttgtgattaatgatttaatcaagattcgttt-gacgagatttcttccattaagagtattaaaatttttgaagaacccctgttgaaatccct 49066103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 27031782 - 27031816
Alignment:
Q  53 aagaggtaaacacatgaatcttaaagtgtttaagt 87  Q
    |||||||||||||||||||||||||||||||||||    
T  27031782 aagaggtaaacacatgaatcttaaagtgtttaagt 27031816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 55992914 - 55992971
Alignment:
Q  112 tttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaa 169  Q
    |||||||||||||||||| |||| ||||| ||  || |||||||||||||||||||||    
T  55992914 tttaatcaagatccgttttaatgagatttgttttgctaagaggattaaaattttgaaa 55992971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 5246 - 5006
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5246 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 5147  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||    
T  5146 gtgattaatgatttaatcaagatccgtttcattgggatttcttccgcaaagaggattaaaattttaaaaaacccctctaaatatcccatcagtggtatca 5047  T
Q  201 gagcat-tggttttggttaaattattgaattcgaatctgtt 240  Q
    |||||| ||||| || ||||||| || ||||| ||||||||    
T  5046 gagcatctggttgtgattaaattgtttaattcaaatctgtt 5006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 3874 - 4071
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3874 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 3973  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtat 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3974 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggattaaaattttgaaaaactcctcttaaaatcccttcagtggtat 4071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 11542030 - 11541791
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11542030 ctttgctttgctcgtgatcagaaagatttctactacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 11541931  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11541930 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggattaaaattttgaaaaaaccctcttaaaatcccttcagtggtatca 11541831  T
Q  201 gagcattggttttggttaaattattgaattcgaatctgtt 240  Q
    |||| | |||| || ||||||| || ||||  ||||||||    
T  11541830 gagcttcggttgtgattaaattgtttaatttaaatctgtt 11541791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 29328945 - 29329135
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29328945 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaaatgtttaagtttctgtttgattt 29329044  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  29329045 gtgattaatgatttaatcaagatccgtttcaatgggatttcttctgcaaagaggattaaaattttgaaaatcccctcttaaaatcccttca 29329135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 12739699 - 12739933
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||    
T  12739699 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacac--gaatcttaaagtgtttaagtttctatttgattt 12739796  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttg-aaaaacccctcttaaaatcccttcagtggtatc 199  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| ||||||||     
T  12739797 gtgattaatgatttaatcaagatccgtttcaataggatttcttccgcaaagagaattaaaatttcgaaaaaacccctcttaaaatcccttaagtggtatt 12739896  T
Q  200 agagcattggttttggttaaattattgaattcgaatc 236  Q
    |||||||||||| || |||||| ||| ||||| ||||    
T  12739897 agagcattggttgtgattaaatcattcaattcaaatc 12739933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 2653038 - 2652852
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2653038 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 2652939  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccc 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2652938 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggattaaaattttgaaaaacccctcttaaaatccc 2652852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 12752016 - 12752206
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12752016 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctttttgattt 12752115  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
     |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  12752116 ttgattaatgatttaattaagatccgtttcaatgggatttcttccgtaaagaggattaaaattttgaaaaacccctcttaaaatccattca 12752206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 15153625 - 15153817
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatctt-aaagtgtttaagtttctgtttgatt 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  15153625 ctttgctttgctcgtgatcagaaatattt-ttctacaaaggttctgctcttcaagaggtaaacacatgaatctttaaagtgtttaaatttctgtttgatt 15153723  T
Q  100 tgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagt 193  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15153724 tgtgagtaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagt 15153817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 11535112 - 11534921
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11535112 ctttgctttgctcgtgatcagaaagatttctactacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 11535013  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttga-aaaacccctcttaaaatcccttca 191  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  11535012 atgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggattaaaattttgaaaaaacccctcttaaaatcccttca 11534921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 9978986 - 9979174
Alignment:
Q  2 tttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaat-cttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| |||||| | ||||||| | ||||||||||    
T  9978986 tttgctttgctcgtgatcagaaatagttctactacaaaggttctgctcttcaagaggaaaacacatgaatccttaaattatttaagtatgtgtttgattt 9979085  T
Q  101 gtgattaatgatttaatcaagatccg-tttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccct 188  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9979086 gtgattaatgatttaatcaagatccgttttcaatgggatttcttccgcaaagaggattaaaattttcaaaaacccctcttaaaatccct 9979174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 18562191 - 18562385
Alignment:
Q  2 tttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatc-----ttaaagtgtttaagtttctgtttg 96  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| |||||||     ||||||||||||||| | ||||||    
T  18562191 tttgctttgctcgtgatcaaaaataattctactacaaaggttctgctcttcaagaggtaaacaaatgaatccttaattaaagtgtttaagtatgtgtttg 18562290  T
Q  97 atttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  18562291 atttgtgattaatgatttaatcaagatccgtttcaatgagatttcttcctcaaagagtattaaaattttgaaaaacccctcttaaaatcccttca 18562385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 3 - 189
Target Start/End: Complemental strand, 18256866 - 18256679
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatct-taaagtgtttaagtttctgtttgatttg 101  Q
    ||||||||||||||||||||||||  ||| ||||||| ||||| |||||||||||| |||||||||||||  |||| ||||||||| | |||||||||||    
T  18256866 ttgctttgctcgtgatcagaaataactctactacaaaagttcttctcttcaagaggcaaacacatgaatccctaaattgtttaagtatgtgtttgatttg 18256767  T
Q  102 tgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccctt 189  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| |||||||||    
T  18256766 tgattaatgatttaatcaagatccgtttcaatgggatttgttccgctaagaggattaaatttttgaaaaacccctctttaaatccctt 18256679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 67 - 237
Target Start/End: Complemental strand, 11557199 - 11557029
Alignment:
Q  67 tgaatcttaaagtgtttaagtttctgtttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttg 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||     
T  11557199 tgaatcttaaagtgtttaagtttctgtttgatttgtgattaatgatttaatcaagatccgtttcaatgagatttcttccgcaaagacggttaaaatttta 11557100  T
Q  167 aaaaacccctcttaaaatcccttcagtggtatcagagcattggttttggttaaattattgaattcgaatct 237  Q
    |||| |||||||||||||||||||||||||||||||||||  |||  | |||||| ||||||||| |||||    
T  11557099 aaaaccccctcttaaaatcccttcagtggtatcagagcatgtgttgcgattaaatcattgaattcaaatct 11557029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 30926254 - 30926378
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaat-cttaaa-gtgtttaagtttctgtttgattt 100  Q
    |||||||||| ||||||| |||   |||| ||||||||||| |||  || |||||||||||||||| || |||||| |||| ||| | | ||||||||||    
T  30926254 ttgctttgcttgtgatcaaaaacgattctgctacaaaggttttgcgatttaagaggtaaacacatggatgcttaaaagtgtataaatatgtgtttgattt 30926353  T
Q  101 gtgattaatgatttaatcaagatcc 125  Q
    | ||||||||||||||||| |||||    
T  30926354 gcgattaatgatttaatcatgatcc 30926378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 7748213 - 7748306
Alignment:
Q  93 tttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccc 187  Q
    |||||||||||||||||||||||||||||||||| ||||  | ||| | ||   | ||||||||||||||||  ||||| |||||||||||||||    
T  7748213 tttgatttgtgattaatgatttaatcaagatccg-ttcatcgtgatatattttactaagaggattaaaatttaaaaaaatccctcttaaaatccc 7748306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 22947697 - 22947653
Alignment:
Q  72 cttaaagtgtttaagtttctgtttgatttgtgattaatgatttaa 116  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||    
T  22947697 cttaaagggtttaattatctgtttgatttgtgattaatgatttaa 22947653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 30918034 - 30918068
Alignment:
Q  94 ttgatttgtgattaatgatttaatcaagatccgtt 128  Q
    |||||||||||||||||||||||||| ||||||||    
T  30918034 ttgatttgtgattaatgatttaatcatgatccgtt 30918068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 29234 - 29033
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  29234 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacac--gaatcttaaagtgtttaagtttctgtttgattt 29137  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29136 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 29037  T
Q  201 gagc 204  Q
    ||||    
T  29036 gagc 29033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 8265 - 8456
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8265 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 8364  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcag 192  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8365 gtgtttaatgatttaatcaagattcgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcag 8456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 4e-97; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 24694510 - 24694275
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24694510 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 24694411  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||| ||||| ||||||||||||||    
T  24694410 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggattaaaatcatgaaaaacacctctttaaatctcttcagtggtatca 24694311  T
Q  201 gagcattggttttggttaaattattgaattcgaatc 236  Q
    |||| |||||| || |||||| ||| ||||||||||    
T  24694310 gagctttggttgtgattaaatcattcaattcgaatc 24694275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 4 - 236
Target Start/End: Complemental strand, 24701276 - 24701044
Alignment:
Q  4 tgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtg 103  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24701276 tgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgatttgtg 24701177  T
Q  104 attaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcagtggtatcagag 203  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||| ||||| |||||||||||||||||    
T  24701176 attaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggattaaaatcatgaaaaacacctctttaaatctcttcagtggtatcagag 24701077  T
Q  204 cattggttttggttaaattattgaattcgaatc 236  Q
    | |||||| || |||||| ||| ||||||||||    
T  24701076 ctttggttgtgattaaatcattcaattcgaatc 24701044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 18565506 - 18565324
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18565506 ctttgctttgctcgtgatcagaaatattt-ttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 18565408  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggat--taaaattttgaaaaacccctcttaaa 182  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||| ||||||||    
T  18565407 gtgattaatgatttaatcaagatccgtttcaatgggatttattccgctaagaggattataaaattttgaaaaacctctcttaaa 18565324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 19713549 - 19713396
Alignment:
Q  2 tttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatc-ttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||| |||| ||||||| |||       |||||||||||||||||||||| ||||| ||||||||| | ||||||||||    
T  19713549 tttgctttgctcgtgatcagaaataattctactacaaatgtt-------tcaagaggtaaacacatgaatccttaaattgtttaagtatgtgtttgattt 19713457  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaa 161  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19713456 gtgattaataatttaatcaagatccgtttcaatgagatttcttccgcaaagaggattaaaa 19713396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 28718960 - 28718819
Alignment:
Q  49 cttcaagaggtaaacacatgaatc-ttaaagtgtttaagtttctgtttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgc 147  Q
    |||||||||||||||||||||| | |||||| ||||||||||   ||||||||||||||||||||||||||||||| |||||||| ||||||| ||| ||    
T  28718960 cttcaagaggtaaacacatgaacccttaaagcgtttaagtttggttttgatttgtgattaatgatttaatcaagattcgtttcaacgggatttgttctgc 28718861  T
Q  148 aaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
     ||||| ||| ||||||||||||| ||||||| |||||||||||    
T  28718860 caagagtatt-aaattttgaaaaa-ccctctttaaatcccttca 28718819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 39539688 - 39539880
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatc-ttaaagtgtttaagtttctgttt--gatt 99  Q
    |||||||||| |||||||||||   |||| ||||||||||||||| ||||||| | ||||| || ||||| ||||||||||||||| | || ||  ||||    
T  39539688 ttgctttgcttgtgatcagaaactattctgctacaaaggttctgcacttcaagggataaactcaggaatccttaaagtgtttaagtatgtgcttatgatt 39539787  T
Q  100 tgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaatttt-gaaaaacccctcttaaaatcccttcag 192  Q
    |||||||||| |||||||||||||||||||| ||| ||||| ||||   ||| ||||||||||||| || ||||||||||| ||||||||||||    
T  39539788 tgtgattaattatttaatcaagatccgtttc-atgagatttgttccattaagcggattaaaattttcgataaacccctcttgaaatcccttcag 39539880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 938477 - 938385
Alignment:
Q  93 tttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccc 187  Q
    ||||||||||||||||||||||| |||| || |||||||||| |||||||||||| ||||  ||||||||||||||||||||| |||||||||||    
T  938477 tttgatttgtgattaatgattta-tcaa-attcgtttcaatgagatttcttccgctaagaaaattaaaattttgaaaaaccccccttaaaatccc 938385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 22546323 - 22546232
Alignment:
Q  91 tgtttgatttgtgattaatgatttaatcaagatccgtt-tcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaat 184  Q
    ||||||||||||||||||| |||||||||||||| ||| ||   ||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  22546323 tgtttgatttgtgattaataatttaatcaagatctgttctc---gggatttattctgctaagaggattaaaattttgaaaaacccctcttaaaat 22546232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 17297953 - 17297875
Alignment:
Q  91 tgtttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaa 171  Q
    |||||||||||||||||||||||||||||| ||||| |||| | | |||| |||||| |||||| ||||||||||||||||    
T  17297953 tgtttgatttgtgattaatgatttaatcaatatccg-ttcatttgaatttattccgccaagagg-ttaaaattttgaaaaa 17297875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 17314029 - 17313950
Alignment:
Q  91 tgtttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaa 171  Q
    |||||||||||||||||||||||||||||| ||  | ||||   | |||| | |||| |||||||||||||||||||||||    
T  17314029 tgtttgatttgtgattaatgatttaatcaatatatg-ttcatctgaatttatcccgccaagaggattaaaattttgaaaaa 17313950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1199 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: scaffold1199
Description:

Target: scaffold1199; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 282 - 472
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  282 ctttgctttgcttgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 381  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  382 gtgattaatgatttaatcaagatccgtttcaatgggatttcttcagaaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 172; Significance: 3e-92; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 4397 - 4588
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4397 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 4496  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttcag 192  Q
    |||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||| |||||||||||||    
T  4497 gtgattaatgatttaatcaagatccgtttcaatgggatttattctataaagaggattaaaattttgaaaaacccctctcaaaatcccttcag 4588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 169; Significance: 2e-90; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 12975 - 12771
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12975 ctttgctttgctcgtgatgagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 12876  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaa-ttttgaaaaacccctcttaaaatcccttcagtggtatc 199  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| ||||||||||    
T  12875 gtgattaatgatttaatcaagatccgttttaatgggatttcttccgcaaagaggattaaaatttttgaaaaacctctctcaaaatccctacagtggtatc 12776  T
Q  200 agagc 204  Q
    |||||    
T  12775 agagc 12771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 5959 - 5811
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5959 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaggaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 5860  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaa 149  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  5859 gtgattaataatttaatcaagatccgttttaatgggatttcttccgcaa 5811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 19470 - 19660
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  19470 ctttgctttgctcgtgatcagaaatatttcttctacaaagattgtgctcttcaaaaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 19569  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  19570 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaatttttgaaaaactcctcttaaaatcccttca 19660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 15327380 - 15327569
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15327380 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttcagctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 15327479  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  15327480 gtgattaatgatttaatcaatatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacctctctt-aaatcccttca 15327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 15507749 - 15507938
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15507749 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttcagctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 15507848  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  15507849 gtgattaatgatttaatcaatatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacctctctt-aaatcccttca 15507938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 6095304 - 6095492
Alignment:
Q  2 tttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| |    
T  6095304 tttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtatttaaatttctatttgattag 6095403  T
Q  102 tgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6095404 tgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaa-ccctcttaaaatcccttca 6095492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 21941824 - 21942012
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21941824 ctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 21941923  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccctt 189  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21941924 gtgattaatgatttaatcaagatccgtttcaatgagattttttccgcatagaggattaaaattttgaaaaacccctcttaaaatccctt 21942012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 22172642 - 22172836
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172642 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 22172741  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggat--taaaattttg--aaaaacccctcttaaaatcccttca 191  Q
     ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||  ||||||||||  ||||||| |||||||||||||||||    
T  22172742 atgattaatgatttaatcaagatccgtttcaatgggatttgttccgctaagcggattataaaattttgaaaaaaacctctcttaaaatcccttca 22172836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 28549209 - 28549376
Alignment:
Q  13 cgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtgattaatgat 112  Q
    |||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28549209 cgtgatcagaaatatttcttc------ggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtgattaatgat 28549302  T
Q  113 ttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaaccc-ctcttaaaatc 185  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  28549303 ttaatcaagatccgtttcaatgagatttcttccgcaaagaggattaaaattgtgaaaaaccctctcttaaaatc 28549376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 24644108 - 24644263
Alignment:
Q  4 tgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtg 103  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24644108 tgctttgctcgtgatcagaaatatttgttatacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgatttgtg 24644207  T
Q  104 attaatgatttaatcaagatccg-tttcaatgggatttcttccgcaaagaggatta 158  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||    
T  24644208 attaatgatttaatcaagatccgttttcaatggaatttgttccgctaagaggatta 24644263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 24796035 - 24795853
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaa-gtttctgtttgatttg 101  Q
    |||||||| || | |||| ||| |||| | ||||||||||| ||| |||||||| |||||||||||||||   |||||||||| |||| |||||||||||    
T  24796035 ttgctttgatcattatcaaaaacatttatgctacaaaggttatgcgcttcaagacgtaaacacatgaatcc--aagtgtttaaagtttgtgtttgatttg 24795938  T
Q  102 tgattaatgatttaatcaagatccgttt-caatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatc 185  Q
    |||||||||||||||| || |||||||| |||||  |||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  24795937 tgattaatgatttaatgaaaatccgttttcaatgaaatttgttccgctaagaggattaaaattttgaataacccctcttaaaatc 24795853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 29230589 - 29230706
Alignment:
Q  74 taaagtgtttaagtttctgtttgatttgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacc 173  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||| |||| |||||||||||| ||||| |    
T  29230589 taaaatgtttaagtttgtgtttgatttgtgattgatgatttaatcaagatctgtttcaatgagatttattccgctaagatgattaaaattttaaaaaaac 29230688  T
Q  174 cctcttaaaatcccttca 191  Q
    |||||| |||||||||||    
T  29230689 cctcttgaaatcccttca 29230706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 27660795 - 27660698
Alignment:
Q  95 tgatttgtgattaatgatttaatcaagatccgttt-caatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  27660795 tgatttgtgataaatgatttaatcaagattcattttcaatgggatttcttccgctaagaggattaaaattttgaaaaacctctcttaaaatcctttca 27660698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 17089259 - 17089347
Alignment:
Q  33 ctacaaaggttctgctcttcaagaggtaaacacatgaatc-ttaaagtgtttaagtttctgtttg---atttgtgattaatgatttaat 117  Q
    ||||||| ||| ||| |||||||||||||||||||||||| ||||| | ||||||| | ||||||   || |||||||| |||||||||    
T  17089259 ctacaaatgttatgcacttcaagaggtaaacacatgaatctttaaaatatttaagtatgtgtttgttaatctgtgattattgatttaat 17089347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 24636994 - 24637073
Alignment:
Q  160 aattttgaaaaacccctcttaaaatcccttcagtggtatcagagcattggttttggttaaattattgaattcgaatctgtt 240  Q
    |||||||||||||| ||| |||| |||||||||| ||||| |||| | |||| || ||||||| || ||||| ||||||||    
T  24636994 aattttgaaaaacctctcgtaaa-tcccttcagtagtatcggagcttcggttgtgattaaattgtttaattcaaatctgtt 24637073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 156; Significance: 9e-83; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 26370 - 26557
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||| |||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26370 ctttgctttgctcatgataagaaaaatttatactacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctatttgattt 26469  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccct 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  26470 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgtaaagaggattaaaattttgaaaaacccctcttaaaacccct 26557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 155; Significance: 4e-82; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 7675 - 7466
Alignment:
Q  15 tgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtgattaatgattt 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7675 tgatcagaaatattttttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctttttgatttgtgattaatgattt 7576  T
Q  115 aatcaagatccgtttcaatgggatttcttccgcaaagaggat--taaaattttgaaaaacccctcttaaaatcccttcagtggtatcagagcat-tggtt 211  Q
    |||||||||||||||||||| ||||| ||||||  |||||||  |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||    
T  7575 aatcaagatccgtttcaatgtgatttgttccgcttagaggattataaaatttggaaaaacctctcttaaaatcccttcagtggtatcagagcatctggtt 7476  T
Q  212 ttggttaaat 221  Q
     |||||||||    
T  7475 ctggttaaat 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 6e-81; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 22790883 - 22790704
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22790883 ctttgctttgctcgtcatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttttgtttgattt 22790784  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggat--taaaattttgaaaaacccctct 178  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  22790783 gtgattaatgatttaatcaagatcaatttcaatgggatttcttccgcaaagaggattataaaattttgaaaaacccctct 22790704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 18620995 - 18621184
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaat-cttaaagtgtttaagtttctgtttgatttg 101  Q
    ||||||| |||||||||| ||| | |||| ||| ||||||| |||| |||||||||||||||||||||| |||||| ||||||| | | |||||||||||    
T  18620995 ttgctttactcgtgatcaaaaacaattctgctataaaggttatgcttttcaagaggtaaacacatgaattcttaaattgtttaactatgtgtttgatttg 18621094  T
Q  102 tgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18621095 tgattaatcatttaatcaagatccgtttcaatgagatttattccgcaaagaggattaaaattttgaaaaacccttcttaaaatcccttca 18621184  T

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Target: chr2; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 41664924 - 41665115
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacat--gaatc-ttaaagtgtttaagtttctgtttgatt 99  Q
    ||||| |||||||||||||||| | |||| ||||||| |||||||||||||||||||||||||||  ||||| ||||| ||||||||| | |||||||||    
T  41664924 ttgctatgctcgtgatcagaaacaattctactacaaatgttctgctcttcaagaggtaaacacatatgaatccttaaattgtttaagtatgtgtttgatt 41665023  T
Q  100 tgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||| ||| ||||  |||| || ||| ||||||||||||||||| ||||| ||||||| |||||||||||    
T  41665024 tgtgattaatgatttaatcaagatccattttaatgatatttgttacgctaagaggattaaaattttaaaaaagccctctttaaatcccttca 41665115  T

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Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 27353517 - 27353696
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgt 102  Q
    ||||||||||||||||||||||   |||  |||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||           ||    
T  27353517 ttgctttgctcgtgatcagaaactattccgctacaaagattctgcgcttcaagaggtaaacacat-aatcttaaagtgtttatgttt-----------gt 27353604  T
Q  103 gattaatgatttaatcaagatc-----cgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatccctt 189  Q
    ||||||||||||||||||||||     ||||||||||| |||| |||||| ||||| |||||||||||||||||||||||||| ||| ||||    
T  27353605 gattaatgatttaatcaagatctgtttcgtttcaatggaatttgttccgctaagagaattaaaattttgaaaaacccctcttagaatacctt 27353696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 12298996 - 12299072
Alignment:
Q  49 cttcaagaggtaaacacatgaatc-ttaaagtgtttaagtttctgtttgatttgtgattaatgatttaatcaagatc 124  Q
    ||||||| |||||||||||||||  ||||||||||||||| | | ||  |||| ||||||||||| |||||||||||    
T  12298996 cttcaaggggtaaacacatgaatgattaaagtgtttaagtatgtattatatttatgattaatgatataatcaagatc 12299072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 6686 - 6877
Alignment:
Q  2 tttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatc-ttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||  || |||||||||||||||| || || ||||||||| | |||||||||     
T  6686 tttgctttgctcgtgatctgaaataattctactacaaaggttctgctctttgagtggtaaacacatgaatcctttaattgtttaagtatgtgtttgattg 6785  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctct-taaaatcccttca 191  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  6786 gtgattaatgatttaatcaagatccatttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctctattaaatcccttca 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 229436 - 229229
Alignment:
Q  2 tttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaat-cttaaagtgtttaagtttctgtttgattt 100  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||||| |||||||||||||||||| |||||| ||||||||| | ||||||||||    
T  229436 tttgctttgctcgtgatcagaaataattctagtacaaaggttctgctcttctagaggtaaacacatgaatccttaaattgtttaagtatgtgtttgattt 229337  T
Q  101 gtgat---taatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctct-taaaatcccttcagtggt 196  Q
    |||||   |||| ||||||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||    
T  229336 gtgattaataataatttaatcaagattcgtttcaatgaaatttcttccgcaaagaggattaaaatttggaaaaaaccctctattaaatcccttcagtggt 229237  T
Q  197 atcagagc 204  Q
    ||||||||    
T  229236 atcagagc 229229  T

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Target: scaffold1303 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 1031 - 892
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  1031 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgttcttcaagaggtaaacacatgaatcttgaagtgtttaagtttttgtttgattt 932  T
Q  101 gtgattaatgatttaatcaagatccgtttcaatgggattt 140  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  931 gtgattaatgatttaagcaagatccatttcaatgggattt 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 107295 - 107107
Alignment:
Q  3 ttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatc-ttaaagtgtttaagtttctgtttgatttg 101  Q
    |||||||||| ||||||  ||| | |||||||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||| | |||||||||||    
T  107295 ttgctttgcttgtgatcgtaaacaattcttctacaaaggttatgctcttccagaggtaaacacatgaatccttaaattgtttaagtatgtgtttgatttg 107196  T
Q  102 tgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
    |||||||||||||||||||||||||||| |||||||||| || ||| |||| ||||||| |||||||||||| ||||| |||||||||||    
T  107195 tgattaatgatttaatcaagatccgttttaatgggatttgtttcgctaaga-gattaaatttttgaaaaacctctctttaaatcccttca 107107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 87868 - 88059
Alignment:
Q  1 ctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatctt-aaagtgtttaagtttctgtttgatt 99  Q
    |||| ||||||| ||||||| ||| | || | ||||||||||||||||||||||||||||||| |||||||||| ||| |||||| || | |||||||||    
T  87868 ctttactttgcttgtgatcataaacaattatactacaaaggttctgctcttcaagaggtaaactcatgaatctttaaattgtttatgtatgtgtttgatt 87967  T
Q  100 tgtgattaatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaacccctcttaaaatcccttca 191  Q
     ||||| ||| ||||||||||||||||||||||||  |||||||||||| |||||||||||  || ||||||||||||||||||||||||||    
T  87968 agtgataaataatttaatcaagatccgtttcaatgaaatttcttccgcatagaggattaaagattggaaaaacccctcttaaaatcccttca 88059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 7 - 171
Target Start/End: Original strand, 209 - 373
Alignment:
Q  7 tttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaatcttaaagtgtttaagtttctgtttgatttgtgatt 106  Q
    |||||| ||||| ||||| |||| | ||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    | |||||||| |||||    
T  209 tttgcttgtgattagaaacatttttgctacaaaggttctactcttcaagagataaacacatgaattttaaagtgtttaagaacatttttgatttttgatt 308  T
Q  107 aatgatttaatcaagatccgtttcaatgggatttcttccgcaaagaggattaaaattttgaaaaa 171  Q
    |||||||||||||||||||| ||||||||||||| ||| ||  ||||||||||||||||||||||    
T  309 aatgatttaatcaagatccgattcaatgggatttattctgctgagaggattaaaattttgaaaaa 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1383 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1383
Description:

Target: scaffold1383; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 4 - 54
Alignment:
Q  157 taaaattttgaaaaacccctcttaaaatcccttcagtggtatcagagcatt 207  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4 taaaattttgaaaaacctctcttaaaatcccttcagtggtatcagagcatt 54  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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