View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6555_high_2 (Length: 566)
Name: NF6555_high_2
Description: NF6555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6555_high_2 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 481; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 18 - 556
Target Start/End: Original strand, 40717882 - 40718405
Alignment:
| Q |
18 |
gtttaaaggtgcaagctctggtatagttggccttggaggtggtcccgtgtctcttataacacaacttggatcgtcaattggttcaaaattctcttattgt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40717882 |
gtttaaaggtgcaagctctggtatagttggccttggaggtggtcccgtgtctcttataacacaacttggatcgtcaattggttcaaaattctcttattgt |
40717981 |
T |
|
| Q |
118 |
ttgcttccattgtctcttgagtcaaacccagttgagtcaaacaggacaagcaaactcagttttggagatgccgctgtggtttctggtgaggatgttttgt |
217 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40717982 |
ttgcttccattgtctcttga---------------gtcaaacaggacaagcaaactcagttttggagatgccgctgtggtttctggtgaggatgttttgt |
40718066 |
T |
|
| Q |
218 |
caactcctatagtgaaaaaagaccccacagttttctactatttgacattggaagcatttagtgttggaaacaaaagaatagaatttggcagatcttcaaa |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40718067 |
caactcctatagtgaaaaaagaccccacagttttctactatttgacattggaagcatttagtgttggaaacaaaagaatagaatttggcagatcttcaaa |
40718166 |
T |
|
| Q |
318 |
tggtagtgatgagggtaacatcataattgattcaggtacaaccttgacgattttgccatctaatatttataataatttggaatcagccgtggcagaatct |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40718167 |
tggtagtgatgagggtaacatcataattgattcaggtacaacgttgacgattttgccatctaatatttataataatttggaatcagccgtggcagaatct |
40718266 |
T |
|
| Q |
418 |
gtgaaactagagcgtgttgatgatccaactcaacaattaaacctttgctatagtaccacatcagacagatataactttcctctaataacagcgcatttta |
517 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
40718267 |
gtgaaactagagcgtgttgatgatccaactcaacaattaaacctttgctatagtaccacatcagacatatataactttcctctaataacagcgcatttta |
40718366 |
T |
|
| Q |
518 |
aaggtgcggatattaagttgcatcccattagtacctttg |
556 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40718367 |
aaggtgcggatattaagttgcatcccattagtacctttg |
40718405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 23 - 556
Target Start/End: Original strand, 14183130 - 14183648
Alignment:
| Q |
23 |
aaggtgcaagctctggtatagttggccttggaggtggtcccgtgtctcttataacacaacttggatcgtcaattggttcaaaattctcttattgtttgct |
122 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| || | |||||||| |||||| | ||||| ||||||| | |||||||||||||||||||| | |
|
|
| T |
14183130 |
aaggtgcaagttctggtatagttggccttggaggtggaccagcatctcttattacacaattgggatcatcaattgatgcaaaattctcttattgtttgtt |
14183229 |
T |
|
| Q |
123 |
tccattgtctcttgagtcaaacccagttgagtcaaacaggacaagcaaactcagttttggagatgccgctgtggtttctggtgaggatgttttgtcaact |
222 |
Q |
| |
|
||| ||||| ||||||||||||| |||||||||||||| ||||||||| | ||||||||||| || || | |||| ||||||| |
|
|
| T |
14183230 |
gcca---------------aacccggttgagtcaaacacgacaagcaaactcaattttggagacacggctgtggtttccggggatggtgttgtgtcaacc |
14183314 |
T |
|
| Q |
223 |
cctatagtgaaaaaagaccccacagttttctactatttgacattggaagcatttagtgttggaaacaaaagaatagaatttggcagatcttcaaatggta |
322 |
Q |
| |
|
|||||||||||||| || || | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |
|
|
| T |
14183315 |
cctatagtgaaaaaggatcctatagttttctactatttgacattggaagcatttagtgttggtaacaaaagaatagaatttgaagggtcttcaaatggtg |
14183414 |
T |
|
| Q |
323 |
gtgatgagggtaacatcataattgattcaggtacaaccttgacgattttgccatctaatatttataataatttggaatcagccgtggcagaatctgtgaa |
422 |
Q |
| |
|
|| |||| ||||||||||||||||||||||||||||| |||||| || | ||| || || |||||||||||||||||||||| ||| |||| ||||| |
|
|
| T |
14183415 |
gtcatgaaggtaacatcataattgattcaggtacaacgttgacggttattccaactgatgtttataataatttggaatcagcggtgttggaattggtgaa |
14183514 |
T |
|
| Q |
423 |
actagagcgtgttgatgatccaactcaacaattaaacctttgctatagtaccacatcagacagatataactttcctctaataacagcgcattttaaaggt |
522 |
Q |
| |
|
||| |||||||| |||||||||| | | ||| |||||||||||||| ||||||||| ||||| | |||||| ||||||| | |||||||||||| |
|
|
| T |
14183515 |
actgaagcgtgttaatgatccaacccgattatttaacctttgctatagcgtcacatcagatggatatgattttcctataataacgacacattttaaaggt |
14183614 |
T |
|
| Q |
523 |
gcggatattaagttgcatcccattagtacctttg |
556 |
Q |
| |
|
|||||| ||||||||||||| |||||||| |||| |
|
|
| T |
14183615 |
gcggatgttaagttgcatcctattagtacatttg |
14183648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 166 - 359
Target Start/End: Original strand, 14192208 - 14192401
Alignment:
| Q |
166 |
agcaaactcagttttggagatgccgctgtggtttctggtgaggatgttttgtcaactcctatagtgaaaaaagaccccacagttttctactatttgacat |
265 |
Q |
| |
|
||||| |||| |||||||||||| ||| ||| ||||| || | ||| || ||||||||||| |||||||||||||| | || ||||||||||||| |
|
|
| T |
14192208 |
agcaagctcaattttggagatgcggctacggtatctggagacggggttgtgacaactcctatattgaaaaaagaccccgaaaccttttactatttgacat |
14192307 |
T |
|
| Q |
266 |
tggaagcatttagtgttggaaacaaaagaatagaatttggcagatcttcaaatggtagtgatgagggtaacatcataattgattcaggtacaac |
359 |
Q |
| |
|
|||||||||||||||||||||| | |||| ||||| |||| || | |||||||| | ||||||||||||||||||||||||| |||||||| |
|
|
| T |
14192308 |
tggaagcatttagtgttggaaatagaagagtagaaattggaggagttccaaatggtgataatgagggtaacatcataattgattcgggtacaac |
14192401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 253 - 445
Target Start/End: Original strand, 14201295 - 14201487
Alignment:
| Q |
253 |
tactatttgacattggaagcatttagtgttggaaacaaaagaatagaatttggcagatcttcaaatggtagtgatgagggtaacatcataattgattcag |
352 |
Q |
| |
|
||||| |||||||| |||||||||||||| ||||||||| |||||||||||| || || || ||||| || ||||||||||||| |||||||||| | |
|
|
| T |
14201295 |
tactacttgacattagaagcatttagtgtgggaaacaaattaatagaatttggaggacctacatatggtggtaatgagggtaacattttaattgattctg |
14201394 |
T |
|
| Q |
353 |
gtacaaccttgacgattttgccatctaatatttataataatttggaatcagccgtggcagaatctgtgaaactagagcgtgttgatgatccaa |
445 |
Q |
| |
|
||||||| || || ||||||| | | || ||||| ||| || |||||||| || ||||||| | | || || |||| |||||| ||||||| |
|
|
| T |
14201395 |
gtacaacattcacatttttgccctatgatgtttattatagatttgaatcagctgtagcagaatatattaatctggagcatgttgaggatccaa |
14201487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 160; Significance: 5e-85; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 148 - 558
Target Start/End: Complemental strand, 19649252 - 19648845
Alignment:
| Q |
148 |
gttgagtcaaacaggacaagcaaactcagttttggagatgccgctgtggtttctggtgaggatgttttgtcaactcctatagtgaaaaaagaccccacag |
247 |
Q |
| |
|
||||| || |||| ||| |||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||| | |||||||||||||| || |
|
|
| T |
19649252 |
gttgactcgaacaagacgagcaaactcaattttggagatgccgctgtggtttctggtgacggtgttgtgtcaactccttttgtgaaaaaagaccctcaag |
19649153 |
T |
|
| Q |
248 |
ttttctactatttgacattggaagcatttagtgttggaaacaaaagaatagaatttggcagatcttcaaatggtagtgatgagggtaacatcataattga |
347 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||||||||| | | || | ||| ||||| ||||||||||||||| |||| |
|
|
| T |
19649152 |
ctttctactatttgacgttagaagcatttagtgttggaaacaaaagaatagaatttg--aagtgtt-agatgacagtgaggagggtaacatcatacttga |
19649056 |
T |
|
| Q |
348 |
ttcaggtacaaccttgacgattttgccatctaatatttataataatttggaatcagccgtggcagaatctgtgaaactagagcgtgttgatgatccaact |
447 |
Q |
| |
|
||| |||||||| ||||| |||| || ||| || |||||| |||||||||||| || || ||| || ||||||||||| |||||||||||||| | | |
|
|
| T |
19649055 |
ttctggtacaacattgactcttttaccgtctcatgtttatactaatttggaatcggcggtagcacaactggtgaaactagatcgtgttgatgatcctaat |
19648956 |
T |
|
| Q |
448 |
caacaattaaacctttgctatagtaccacatcagacagatataactttcctctaataacagcgcattttaaaggtgcggatattaagttgcatcccatta |
547 |
Q |
| |
|
|||| |||||||||||| ||||||| |||||||||| |||| | |||||| |||| || || |||||||||||||| |||||||||||| | || |||| |
|
|
| T |
19648955 |
caactattaaacctttgttatagtatcacatcagaccaatatgattttcctataatcactgcacattttaaaggtgcagatattaagttgaacccaatta |
19648856 |
T |
|
| Q |
548 |
gtacctttgct |
558 |
Q |
| |
|
||||||||||| |
|
|
| T |
19648855 |
gtacctttgct |
19648845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 24 - 556
Target Start/End: Original strand, 34665878 - 34666398
Alignment:
| Q |
24 |
aggtgcaagctctggtatagttggccttggaggtggtcccgtgtctcttataacacaacttggatcgtcaattggttcaaaattctcttattgtttgctt |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || || |||||||| ||||||||| | ||||| ||||||||| |||||||||||||||||| | |
|
|
| T |
34665878 |
aggtgcaagctctggtatagttggccttggaggcgggccggtgtctctcataacacaattgggatcatcaattggtggtaaattctcttattgtttggtg |
34665977 |
T |
|
| Q |
124 |
ccattgtctcttgagtcaaacccagttgagtcaaacaggacaagcaaactcagttttggagatgccgctgtggtttctggtgaggatgttttgtcaactc |
223 |
Q |
| |
|
||||||| | || | || ||||||||| |||| | |||||||||||||||||||||||||||||| ||||| | |||| ||||||||| |
|
|
| T |
34665978 |
ccattgt--------tgaa--caag--gagtcaaacgcatcaagtatactcagttttggagatgccgctgtggtttcgggtgacggtgttgtgtcaactc |
34666065 |
T |
|
| Q |
224 |
ctatagtgaaaaaagaccccacagttttctactatttgacattggaagcatttagtgttggaaacaaaagaatagaatttggcagatcttc---aaatgg |
320 |
Q |
| |
|
|| || | |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| | ||||| | ||| |
|
|
| T |
34666066 |
ctctaataaaaaaagacccc---gttttctactttttgacattacaagcatttagtgttggaaacaaaagagtagaatttggaggctcttcggaaggtgg |
34666162 |
T |
|
| Q |
321 |
tagtgatgagggtaacatcataattgattcaggtacaaccttgacgattttgccatctaatatttataataatttggaatcagccgtggcagaatctgtg |
420 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||||||| ||||| || | || || | | |||| ||| ||||||||||| |||| || | ||| |
|
|
| T |
34666163 |
tgatgatgaaggtaacatcataattgattcaggtacaacattgacacttataccttccgacgtctatactaacttggaatcagctgtggtggatttggtg |
34666262 |
T |
|
| Q |
421 |
aaactagagcgtgttgatgatccaactcaacaattaaacctttgctatagtaccacatcagacagatataactttcctctaataacagcgcattttaaag |
520 |
Q |
| |
|
|||||||| |||||||||||||| | ||||||||| | ||| ||||||||| | |||| | |||| | |||||| |||| || || |||||||||| |
|
|
| T |
34666263 |
aaactagatcgtgttgatgatcctaatcaacaattcagcctatgctatagtttgaaatcaaatgaatatgattttcctataatcaccgcacattttaaag |
34666362 |
T |
|
| Q |
521 |
gtgcggatattaagttgcatcccattagtacctttg |
556 |
Q |
| |
|
|||| |||||| |||||||| | ||||||||||||| |
|
|
| T |
34666363 |
gtgccgatattgagttgcattctattagtacctttg |
34666398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 556
Target Start/End: Original strand, 34646188 - 34646704
Alignment:
| Q |
28 |
gcaagctctggtatagttggccttggaggtggtcccgtgtctcttataacacaacttggatcgtcaattggttcaaaattctcttattgtttgcttccat |
127 |
Q |
| |
|
||||||||||||||||||||||||||||| || || |||||||| ||||||||| | ||||| ||||||||| |||||||||||||||||| | |||| |
|
|
| T |
34646188 |
gcaagctctggtatagttggccttggaggcgggccggtgtctctcataacacaattgggatcatcaattggtggtaaattctcttattgtttggtgccat |
34646287 |
T |
|
| Q |
128 |
tgtctcttgagtcaaacccagttgagtcaaacaggacaagcaaactcagttttggagatgccgctgtggtttctggtgaggatgttttgtcaactcctat |
227 |
Q |
| |
|
||| | || | || ||||||||| |||| | |||||||||||||||||||||||||||||| ||||| | |||| ||||||||||| | |
|
|
| T |
34646288 |
tgt--------tgaa--caag--gagtcaaacgcatcaagtatactcagttttggagatgccgctgtggtttcgggtgacggtgttgtgtcaactcctct |
34646375 |
T |
|
| Q |
228 |
agtgaaaaaagaccccacagttttctactatttgacattggaagcatttagtgttggaaacaaaagaatagaatttggcagatcttc---aaatggtagt |
324 |
Q |
| |
|
| | |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| | ||||| | |||| | |
|
|
| T |
34646376 |
aataaaaaaagacccc---gttttctactttttgacattacaagcatttagtgttggaaacaaaagagtagaatttggaggctcttcggaaggtggtgat |
34646472 |
T |
|
| Q |
325 |
gatgagggtaacatcataattgattcaggtacaaccttgacgattttgccatctaatatttataataatttggaatcagccgtggcagaatctgtgaaac |
424 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||| || | || || | | |||| ||| ||||||||||| |||| || | ||||||| |
|
|
| T |
34646473 |
gatgaaggtaacatcataattgattcaggtacaacattgacacttataccttccgacgtctatactaacttggaatcagctgtggtggatttggtgaaac |
34646572 |
T |
|
| Q |
425 |
tagagcgtgttgatgatccaactcaacaattaaacctttgctatagtaccacatcagacagatataactttcctctaataacagcgcattttaaaggtgc |
524 |
Q |
| |
|
|||| |||||||||||||| | ||||||||| | ||| ||||||||| | |||| | |||| | |||||| |||| || | |||||||||||||| |
|
|
| T |
34646573 |
tagatcgtgttgatgatcctaatcaacaattcagcctatgctatagtttgaaatcaaatgaatatgattttcctataatcaccgtacattttaaaggtgc |
34646672 |
T |
|
| Q |
525 |
ggatattaagttgcatcccattagtacctttg |
556 |
Q |
| |
|
||| || |||||||| | ||||||||||||| |
|
|
| T |
34646673 |
cgatgttgagttgcattctattagtacctttg |
34646704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 134; Significance: 2e-69; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 32 - 555
Target Start/End: Original strand, 45645388 - 45645899
Alignment:
| Q |
32 |
gctctggtatagttggccttggaggtggtcccgtgtctcttataacacaacttggatcgtcaattggttcaaaattctcttattgtttgcttccattgtc |
131 |
Q |
| |
|
||||||||||||| |||||||||||||| || |||||||| ||||||||| | ||||| ||||||||| ||||||||||||||||| | |||||| |
|
|
| T |
45645388 |
gctctggtatagtgggccttggaggtggaccagtgtctctaataacacaattgggatcatcaattggtggtgaattctcttattgtttggtgccattgga |
45645487 |
T |
|
| Q |
132 |
tcttgagtcaaacccagttgagtcaaacaggacaagcaaactcagttttggagatgccgctgtggtttctggtgaggatgttttgtcaactcctatagtg |
231 |
Q |
| |
|
| | | || |||||||||| || || |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| | |
|
|
| T |
45645488 |
t----------aacaag--gagtcaaacacaacgagtaaactcagttttggagatgccgctgtggtttcgggtgacaatgttgtgtcaactcctataata |
45645575 |
T |
|
| Q |
232 |
aaaaaagaccccacagttttctactatttgacattggaagcatttagtgttggaaacaaaagaatagaatttggcagatcttcaaatggtagtgatgagg |
331 |
Q |
| |
|
||||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||| |||||||||| | |||||| | | | ||||||| | |
|
|
| T |
45645576 |
aaaaaagacccttcagtttactacgttttgacattagaagcatttagtgttggaaacaaaagagtagaatttggagggtcttcagaggatggtgatgaag |
45645675 |
T |
|
| Q |
332 |
gtaacatcataattgattcaggtacaaccttgacgattttgccatctaatatttataataatttggaatcagccgtggcagaatctgtgaaactagagcg |
431 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| | |||| ||| || | ||||||| |||||||||||||| |||| || | ||||||||| | || |
|
|
| T |
45645676 |
gtaacattataattgattcaggtacaacattgatggttttaccagctgacgtttataaaaatttggaatcagctgtggttgatttggtgaaactaaaacg |
45645775 |
T |
|
| Q |
432 |
tgttgatgatccaactcaacaattaaacctttgctatagtaccacatcagacagatataactttcctctaataacagcgcattttaaaggtgcggatatt |
531 |
Q |
| |
|
||| |||||||| | ||| ||| ||| ||||||||| | |||| ||| |||| | ||||||||||| || || |||||||||||||| ||| || |
|
|
| T |
45645776 |
tgtggatgatccttataaactattcggcctatgctatagtgcgacattagatgaatatgattttcctctaatcaccgcacattttaaaggtgctgatgtt |
45645875 |
T |
|
| Q |
532 |
aagttgcatcccattagtaccttt |
555 |
Q |
| |
|
|||||||| | |||||||||||| |
|
|
| T |
45645876 |
gagttgcattctattagtaccttt |
45645899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 425
Target Start/End: Original strand, 1390492 - 1390655
Alignment:
| Q |
262 |
acattggaagcatttagtgttggaaacaaaagaatagaatttggcagatc-ttcaaatggtagtgatgagggtaacatcataattgattcaggtacaacc |
360 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||| || | | ||||||||||||| ||| ||||||||| | ||||||||||||| | |
|
|
| T |
1390492 |
acattgaaagcatttagtgttggaaacaaaagagtagaattt-tcaaagcaatcaaatggtagtgttgatggtaacatcgtggttgattcaggtacggca |
1390590 |
T |
|
| Q |
361 |
ttgacgattttgccatctaatatttataataatttggaatcagccgtggcagaatctgtgaaact |
425 |
Q |
| |
|
|||| || | |||||| ||||||| |||||||| ||| ||| |||||| |||| || ||||| |
|
|
| T |
1390591 |
gtgacagttgtaccatctggtatttatcataatttgaaataagctgtggcaaaatcggttaaact |
1390655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 70; Significance: 3e-31; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 169 - 358
Target Start/End: Original strand, 34302984 - 34303173
Alignment:
| Q |
169 |
aaactcagttttggagatgccgctgtggtttctggtgaggatgttttgtcaactcctatagtgaaaaaagaccccacagttttctactatttgacattgg |
268 |
Q |
| |
|
||||||| ||||||||||| ||| | ||||||||| | |||| ||||||||||||||||| |||||||||| || ||||||||||||||||| | | |
|
|
| T |
34302984 |
aaactcaattttggagatgtcgcaattgtttctggtcacaatgtattgtcaactcctatagttaaaaaagaccattcatttttctactatttgacaatag |
34303083 |
T |
|
| Q |
269 |
aagcatttagtgttggaaacaaaagaatagaatttggcagatcttcaaatggtagtgatgagggtaacatcataattgattcaggtacaa |
358 |
Q |
| |
|
|||||||||| |||||| |||||||| ||||||||| | || ||||| ||| ||| || ||||||||||||||||||||| |||||| |
|
|
| T |
34303084 |
aagcatttagcgttggagacaaaagagtagaatttgcagggtcctcaaaaggtgttgaagaaggtaacatcataattgattcaagtacaa |
34303173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 34302848 - 34302938
Alignment:
| Q |
30 |
aagctctggtatagttggccttggaggtggtcccgtgtctcttataacacaacttggatcgtcaattggttcaaaattctcttattgtttg |
120 |
Q |
| |
|
|||||||||| ||||||||||||||||||| || | ||||| ||||||||| | ||| ||||||||||| |||||||||||||||||| |
|
|
| T |
34302848 |
aagctctggtgtagttggccttggaggtggacctgcatctctaataacacaattgggaccgtcaattggtggtaaattctcttattgtttg |
34302938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 33889265 - 33889226
Alignment:
| Q |
262 |
acattggaagcatttagtgttggaaacaaaagaatagaat |
301 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
33889265 |
acattggaagcatttagtgtgggaaacaatagaatagaat |
33889226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 33893731 - 33893770
Alignment:
| Q |
262 |
acattggaagcatttagtgttggaaacaaaagaatagaat |
301 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
33893731 |
acattggaagcatttagtgtgggaaacaatagaatagaat |
33893770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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