View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6555_low_22 (Length: 259)
Name: NF6555_low_22
Description: NF6555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6555_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 3 - 242
Target Start/End: Original strand, 39788186 - 39788425
Alignment:
| Q |
3 |
atgcgagaccttttacattttaagcttattccttttattacaaatcttctctaatttctcaaaaccaaatcaatttgttcaccaacataaactaatttaa |
102 |
Q |
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| T |
39788186 |
atgcgagaccttttacattttaagcttattccttttattacaattcttctctaatttctcaaaaccaaatcaatttgttcaccaacataaactaatttaa |
39788285 |
T |
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| Q |
103 |
accaataaattatggattttagaggtgtgcgggaggtgggtagattgagaaaagaatttcactaactgaaaagtatatttaatttttcttacgttaaatg |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39788286 |
accaataaattatggattttagaggtgtgcgggaggtgggtagattgagaaaagaatttcactaactgaaaagtatatttaatttttcttacgttaaatg |
39788385 |
T |
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| Q |
203 |
aatttcgtaaggattttttcttatttgtttagacaaaatt |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
39788386 |
aatttcgtaaggattttttcttatttgtttagacaaaatt |
39788425 |
T |
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