View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6559_low_2 (Length: 287)

Name: NF6559_low_2
Description: NF6559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6559_low_2
NF6559_low_2
[»] chr5 (50 HSPs)
chr5 (13-283)||(16472217-16472491)
chr5 (20-161)||(16465221-16465365)
chr5 (181-280)||(27428052-27428151)
chr5 (181-258)||(32726788-32726865)
chr5 (181-243)||(20959508-20959570)
chr5 (181-258)||(8886913-8886990)
chr5 (181-258)||(17039693-17039770)
chr5 (181-258)||(23423818-23423895)
chr5 (181-258)||(33818623-33818700)
chr5 (181-243)||(12045727-12045789)
chr5 (181-275)||(13620172-13620266)
chr5 (181-258)||(618294-618371)
chr5 (190-243)||(22649406-22649459)
chr5 (181-250)||(23975635-23975704)
chr5 (193-258)||(35620405-35620470)
chr5 (181-250)||(36196394-36196463)
chr5 (181-245)||(11927861-11927925)
chr5 (181-245)||(23408980-23409044)
chr5 (195-258)||(746930-746993)
chr5 (195-258)||(25397850-25397913)
chr5 (181-275)||(17079405-17079499)
chr5 (181-245)||(7003805-7003867)
chr5 (181-250)||(15060973-15061042)
chr5 (181-258)||(16121901-16121978)
chr5 (181-258)||(17986729-17986806)
chr5 (181-258)||(25673290-25673367)
chr5 (181-258)||(33816820-33816897)
chr5 (181-258)||(36831952-36832029)
chr5 (191-251)||(24138910-24138970)
chr5 (195-250)||(4125258-4125313)
chr5 (195-258)||(10494751-10494814)
chr5 (191-258)||(26708647-26708714)
chr5 (191-258)||(26978381-26978448)
chr5 (195-258)||(40484058-40484121)
chr5 (192-258)||(17036474-17036540)
chr5 (184-258)||(25652645-25652719)
chr5 (193-258)||(2472776-2472841)
chr5 (181-258)||(7888797-7888874)
chr5 (181-242)||(13974156-13974217)
chr5 (181-258)||(36716262-36716339)
chr5 (181-245)||(12328301-12328365)
chr5 (14-132)||(625995-626113)
chr5 (191-258)||(5982655-5982722)
chr5 (196-275)||(31853133-31853212)
chr5 (195-258)||(38837733-38837796)
chr5 (181-251)||(10420321-10420391)
chr5 (197-243)||(26301919-26301965)
chr5 (181-250)||(8108930-8108999)
chr5 (195-260)||(17772028-17772093)
chr5 (189-250)||(28265545-28265606)
[»] chr3 (76 HSPs)
chr3 (10-129)||(25052479-25052599)
chr3 (181-275)||(28389969-28390063)
chr3 (181-258)||(27449084-27449161)
chr3 (181-256)||(7623595-7623670)
chr3 (181-275)||(21020061-21020155)
chr3 (181-275)||(27212826-27212920)
chr3 (181-258)||(11085404-11085481)
chr3 (181-250)||(26830512-26830581)
chr3 (182-258)||(19610335-19610411)
chr3 (191-258)||(23217270-23217337)
chr3 (181-243)||(1628211-1628273)
chr3 (181-251)||(11007752-11007822)
chr3 (181-251)||(11915754-11915824)
chr3 (181-275)||(36543745-36543839)
chr3 (181-258)||(5260933-5261010)
chr3 (181-258)||(16299857-16299934)
chr3 (181-250)||(17582371-17582440)
chr3 (181-258)||(17762638-17762715)
chr3 (181-250)||(18539800-18539869)
chr3 (181-258)||(19063958-19064035)
chr3 (181-258)||(19269926-19270003)
chr3 (181-258)||(19545506-19545583)
chr3 (181-258)||(25882566-25882643)
chr3 (181-258)||(29215988-29216065)
chr3 (181-258)||(30219334-30219411)
chr3 (182-258)||(1311021-1311097)
chr3 (181-245)||(4393425-4393489)
chr3 (181-245)||(9652574-9652638)
chr3 (181-245)||(49915447-49915511)
chr3 (191-258)||(13921331-13921398)
chr3 (191-258)||(28859597-28859664)
chr3 (184-251)||(46942486-46942553)
chr3 (191-258)||(48404866-48404933)
chr3 (181-251)||(27968911-27968981)
chr3 (181-275)||(31433733-31433827)
chr3 (181-258)||(8428167-8428244)
chr3 (181-250)||(8543465-8543534)
chr3 (181-258)||(18091609-18091686)
chr3 (181-250)||(18104600-18104669)
chr3 (181-258)||(19223445-19223522)
chr3 (190-275)||(20088405-20088490)
chr3 (191-251)||(29236050-29236110)
chr3 (195-258)||(1745549-1745612)
chr3 (195-258)||(15064054-15064117)
chr3 (181-280)||(15490031-15490129)
chr3 (191-258)||(21816727-21816794)
chr3 (195-258)||(23773487-23773550)
chr3 (195-258)||(26098823-26098886)
chr3 (195-258)||(43329825-43329888)
chr3 (181-275)||(20615388-20615482)
chr3 (189-275)||(26963294-26963380)
chr3 (181-258)||(8110335-8110412)
chr3 (189-250)||(29956376-29956437)
chr3 (189-250)||(30005531-30005592)
chr3 (195-275)||(5565732-5565812)
chr3 (181-245)||(11219134-11219198)
chr3 (195-251)||(13905107-13905163)
chr3 (181-245)||(29704107-29704171)
chr3 (195-258)||(5744426-5744489)
chr3 (195-258)||(5781385-5781448)
chr3 (195-258)||(11837276-11837339)
chr3 (211-258)||(17269666-17269713)
chr3 (195-258)||(21490096-21490159)
chr3 (184-251)||(31250087-31250154)
chr3 (181-256)||(36564503-36564578)
chr3 (195-258)||(50665698-50665761)
chr3 (200-250)||(6718725-6718775)
chr3 (200-258)||(10941727-10941785)
chr3 (181-243)||(18380020-18380082)
chr3 (190-248)||(29451099-29451157)
chr3 (10-103)||(47968798-47968892)
chr3 (181-258)||(26390696-26390773)
chr3 (191-240)||(35579605-35579654)
chr3 (205-245)||(8546265-8546305)
chr3 (220-252)||(27711236-27711268)
chr3 (195-275)||(46012773-46012853)
[»] chr7 (54 HSPs)
chr7 (181-275)||(22501594-22501688)
chr7 (181-275)||(816236-816330)
chr7 (181-258)||(24605838-24605915)
chr7 (181-258)||(40847497-40847574)
chr7 (181-275)||(31042251-31042345)
chr7 (181-258)||(10050898-10050975)
chr7 (194-275)||(11852021-11852102)
chr7 (181-258)||(22486394-22486471)
chr7 (181-258)||(23577251-23577328)
chr7 (181-258)||(31425573-31425650)
chr7 (181-258)||(47523712-47523789)
chr7 (181-250)||(11036507-11036576)
chr7 (181-250)||(20174020-20174089)
chr7 (181-258)||(21917396-21917473)
chr7 (181-258)||(23232039-23232116)
chr7 (181-258)||(23750798-23750875)
chr7 (181-258)||(36636506-36636583)
chr7 (181-258)||(39979686-39979763)
chr7 (181-243)||(20429465-20429527)
chr7 (181-275)||(20924003-20924097)
chr7 (181-251)||(28800878-28800948)
chr7 (181-243)||(37135362-37135424)
chr7 (189-258)||(1842902-1842971)
chr7 (181-258)||(15014467-15014544)
chr7 (181-258)||(18217829-18217906)
chr7 (181-258)||(24140450-24140527)
chr7 (181-258)||(27806018-27806095)
chr7 (189-258)||(38057640-38057709)
chr7 (181-258)||(45664768-45664845)
chr7 (181-256)||(1907355-1907430)
chr7 (195-258)||(4514779-4514842)
chr7 (181-259)||(687877-687955)
chr7 (181-243)||(9698615-9698677)
chr7 (189-275)||(25777157-25777243)
chr7 (181-258)||(2457670-2457747)
chr7 (189-258)||(6849273-6849342)
chr7 (181-258)||(7733374-7733451)
chr7 (193-258)||(15969796-15969861)
chr7 (189-245)||(27130342-27130396)
chr7 (184-245)||(32267350-32267411)
chr7 (195-251)||(3904547-3904603)
chr7 (181-245)||(42926495-42926559)
chr7 (195-258)||(3872249-3872312)
chr7 (191-258)||(21623031-21623098)
chr7 (195-258)||(26577279-26577342)
chr7 (195-258)||(33427704-33427767)
chr7 (200-250)||(2650898-2650948)
chr7 (181-243)||(36993820-36993882)
chr7 (181-251)||(21871572-21871638)
chr7 (181-250)||(23699895-23699964)
chr7 (49-110)||(37205258-37205319)
chr7 (181-250)||(48933136-48933205)
chr7 (195-251)||(1824269-1824325)
chr7 (195-243)||(2093439-2093487)
[»] chr6 (57 HSPs)
chr6 (181-258)||(12845003-12845080)
chr6 (181-258)||(9892963-9893040)
chr6 (181-258)||(15364520-15364597)
chr6 (181-258)||(28364911-28364988)
chr6 (181-275)||(21691541-21691635)
chr6 (181-258)||(495689-495766)
chr6 (181-258)||(22579411-22579488)
chr6 (181-258)||(25398002-25398079)
chr6 (181-258)||(2992615-2992692)
chr6 (181-258)||(12351648-12351725)
chr6 (181-258)||(12951708-12951785)
chr6 (181-258)||(18033587-18033664)
chr6 (181-250)||(21140939-21141008)
chr6 (181-258)||(22083838-22083915)
chr6 (181-250)||(27705422-27705491)
chr6 (181-258)||(27796896-27796973)
chr6 (181-243)||(5270392-5270454)
chr6 (181-251)||(6598464-6598534)
chr6 (181-275)||(9885243-9885337)
chr6 (181-275)||(11431686-11431779)
chr6 (193-258)||(11049813-11049878)
chr6 (189-250)||(23281794-23281855)
chr6 (181-258)||(24661071-24661148)
chr6 (181-257)||(12680247-12680323)
chr6 (181-245)||(20182145-20182209)
chr6 (181-245)||(22153782-22153846)
chr6 (195-258)||(5192251-5192314)
chr6 (195-258)||(13145016-13145079)
chr6 (195-258)||(14872133-14872196)
chr6 (181-256)||(14886561-14886636)
chr6 (200-258)||(5360428-5360486)
chr6 (181-275)||(9060091-9060184)
chr6 (181-243)||(11530225-11530287)
chr6 (181-251)||(21990243-21990313)
chr6 (193-251)||(26939599-26939657)
chr6 (190-275)||(30745764-30745847)
chr6 (181-258)||(2669309-2669386)
chr6 (182-275)||(12157421-12157514)
chr6 (181-258)||(12200694-12200771)
chr6 (181-258)||(17919536-17919613)
chr6 (181-245)||(16250877-16250941)
chr6 (191-258)||(3673195-3673262)
chr6 (195-258)||(11077663-11077726)
chr6 (195-258)||(12499230-12499293)
chr6 (195-258)||(12506559-12506622)
chr6 (195-258)||(12509608-12509671)
chr6 (193-244)||(26224440-26224491)
chr6 (220-258)||(6978316-6978354)
chr6 (191-245)||(15448395-15448449)
chr6 (181-275)||(18048788-18048882)
chr6 (181-258)||(1939304-1939381)
chr6 (201-250)||(18492389-18492438)
chr6 (195-252)||(20692879-20692936)
chr6 (193-258)||(33250770-33250835)
chr6 (199-243)||(12205262-12205306)
chr6 (195-251)||(19175846-19175902)
chr6 (195-275)||(33547560-33547640)
[»] chr1 (61 HSPs)
chr1 (181-258)||(13523023-13523100)
chr1 (11-138)||(10253781-10253909)
chr1 (181-258)||(22603548-22603625)
chr1 (181-258)||(41071897-41071974)
chr1 (181-275)||(41752433-41752527)
chr1 (181-258)||(12370003-12370080)
chr1 (181-258)||(14760867-14760944)
chr1 (181-258)||(38531232-38531309)
chr1 (181-275)||(19081728-19081822)
chr1 (181-275)||(19129616-19129710)
chr1 (181-258)||(6459217-6459294)
chr1 (181-250)||(9259253-9259322)
chr1 (181-250)||(9464103-9464172)
chr1 (181-250)||(12161814-12161883)
chr1 (181-258)||(12720809-12720886)
chr1 (181-254)||(14486698-14486771)
chr1 (181-258)||(15243085-15243162)
chr1 (181-250)||(22158802-22158871)
chr1 (181-250)||(22789661-22789730)
chr1 (181-250)||(23457897-23457966)
chr1 (181-258)||(45839292-45839369)
chr1 (181-250)||(52183678-52183747)
chr1 (191-258)||(4340417-4340484)
chr1 (183-258)||(12174828-12174903)
chr1 (181-256)||(16258550-16258625)
chr1 (181-256)||(18894964-18895039)
chr1 (181-280)||(29549418-29549517)
chr1 (191-258)||(50845392-50845459)
chr1 (181-251)||(9110044-9110114)
chr1 (181-275)||(12989852-12989946)
chr1 (181-258)||(7830031-7830108)
chr1 (181-258)||(13102316-13102393)
chr1 (181-250)||(20408230-20408299)
chr1 (189-258)||(26825248-26825317)
chr1 (194-258)||(11917799-11917863)
chr1 (191-251)||(41120806-41120866)
chr1 (181-244)||(7181631-7181694)
chr1 (195-258)||(19865258-19865321)
chr1 (181-251)||(6412122-6412192)
chr1 (181-243)||(16913654-16913716)
chr1 (181-258)||(18787974-18788049)
chr1 (181-243)||(20290397-20290459)
chr1 (181-251)||(32046876-32046946)
chr1 (220-258)||(41359027-41359065)
chr1 (181-258)||(9985389-9985466)
chr1 (184-245)||(13195586-13195647)
chr1 (181-258)||(17200072-17200149)
chr1 (181-250)||(17661050-17661119)
chr1 (181-250)||(18890619-18890688)
chr1 (189-250)||(51973432-51973493)
chr1 (191-251)||(46786027-46786087)
chr1 (181-245)||(46865243-46865307)
chr1 (195-258)||(28229517-28229580)
chr1 (220-275)||(30928423-30928478)
chr1 (181-256)||(41063197-41063272)
chr1 (195-258)||(46790014-46790077)
chr1 (190-244)||(50092374-50092428)
chr1 (181-258)||(20580909-20580986)
chr1 (201-258)||(46339507-46339564)
chr1 (181-217)||(13295039-13295075)
chr1 (181-245)||(29093629-29093693)
[»] chr4 (49 HSPs)
chr4 (181-275)||(8878881-8878975)
chr4 (181-275)||(22128357-22128451)
chr4 (181-258)||(5399607-5399684)
chr4 (181-258)||(25147719-25147796)
chr4 (181-258)||(30269050-30269127)
chr4 (181-258)||(30283062-30283139)
chr4 (181-258)||(55309275-55309352)
chr4 (181-275)||(16915367-16915461)
chr4 (181-251)||(32175806-32175876)
chr4 (10-138)||(12266442-12266571)
chr4 (181-258)||(22156663-22156740)
chr4 (181-250)||(27040095-27040164)
chr4 (181-258)||(33914057-33914134)
chr4 (189-258)||(36689683-36689752)
chr4 (181-250)||(46286299-46286368)
chr4 (195-275)||(4606874-4606954)
chr4 (181-245)||(18051837-18051901)
chr4 (184-251)||(9913259-9913326)
chr4 (191-258)||(19839187-19839254)
chr4 (191-250)||(37761912-37761971)
chr4 (181-243)||(18744147-18744209)
chr4 (184-258)||(38223511-38223585)
chr4 (191-245)||(45091282-45091336)
chr4 (181-258)||(2275740-2275817)
chr4 (181-250)||(37378693-37378762)
chr4 (181-257)||(5473847-5473923)
chr4 (191-251)||(13028885-13028945)
chr4 (181-245)||(45532654-45532718)
chr4 (181-256)||(1638445-1638520)
chr4 (191-258)||(25026565-25026632)
chr4 (195-258)||(30507999-30508062)
chr4 (195-258)||(38619859-38619922)
chr4 (195-258)||(38645762-38645825)
chr4 (181-243)||(13564992-13565054)
chr4 (189-275)||(29238429-29238515)
chr4 (195-245)||(29625337-29625387)
chr4 (181-258)||(39234940-39235015)
chr4 (189-250)||(19680494-19680555)
chr4 (181-258)||(22168266-22168343)
chr4 (181-258)||(30568061-30568138)
chr4 (191-243)||(4586835-4586887)
chr4 (195-251)||(14944758-14944814)
chr4 (191-275)||(34557191-34557275)
chr4 (195-258)||(9239343-9239406)
chr4 (195-258)||(9670541-9670604)
chr4 (200-258)||(9059014-9059072)
chr4 (181-258)||(12071960-12072037)
chr4 (191-243)||(4627155-4627207)
chr4 (195-275)||(12105995-12106074)
[»] scaffold0576 (1 HSPs)
scaffold0576 (181-258)||(9291-9368)
[»] chr8 (52 HSPs)
chr8 (181-258)||(3823131-3823208)
chr8 (181-258)||(17103927-17104004)
chr8 (181-258)||(17824678-17824755)
chr8 (184-275)||(29345072-29345163)
chr8 (181-258)||(8555366-8555443)
chr8 (181-258)||(43431621-43431698)
chr8 (195-275)||(26399052-26399132)
chr8 (189-252)||(15251608-15251671)
chr8 (181-275)||(6816428-6816522)
chr8 (181-258)||(21350476-21350553)
chr8 (181-258)||(24576086-24576163)
chr8 (193-258)||(27869248-27869313)
chr8 (181-258)||(33652565-33652642)
chr8 (191-258)||(5670231-5670298)
chr8 (181-244)||(6817052-6817115)
chr8 (191-258)||(11938753-11938820)
chr8 (195-258)||(32247921-32247984)
chr8 (181-256)||(37992097-37992172)
chr8 (181-250)||(4330976-4331045)
chr8 (181-258)||(19240865-19240942)
chr8 (181-258)||(19314049-19314126)
chr8 (181-258)||(40289483-40289559)
chr8 (181-245)||(4647830-4647894)
chr8 (191-251)||(19256220-19256280)
chr8 (181-245)||(31344247-31344311)
chr8 (195-258)||(23752348-23752411)
chr8 (195-258)||(25273389-25273452)
chr8 (191-258)||(30687944-30688011)
chr8 (195-250)||(31399578-31399633)
chr8 (181-251)||(17810296-17810366)
chr8 (220-258)||(19493717-19493755)
chr8 (191-245)||(24636660-24636714)
chr8 (181-251)||(32961657-32961727)
chr8 (220-277)||(15289679-15289736)
chr8 (220-277)||(15470048-15470105)
chr8 (181-258)||(16062001-16062078)
chr8 (181-258)||(18010122-18010199)
chr8 (193-258)||(22939323-22939388)
chr8 (181-250)||(24193266-24193335)
chr8 (181-250)||(29350921-29350990)
chr8 (181-245)||(9915115-9915179)
chr8 (191-251)||(30467023-30467083)
chr8 (195-258)||(19488123-19488186)
chr8 (181-244)||(27910840-27910903)
chr8 (181-244)||(27957259-27957322)
chr8 (189-244)||(29473376-29473431)
chr8 (181-243)||(3692248-3692310)
chr8 (181-243)||(5879202-5879264)
chr8 (220-258)||(8789877-8789915)
chr8 (195-245)||(33413045-33413095)
chr8 (191-243)||(6084321-6084373)
chr8 (210-258)||(21219302-21219350)
[»] chr2 (40 HSPs)
chr2 (181-257)||(37802441-37802517)
chr2 (181-251)||(2556091-2556161)
chr2 (181-275)||(29998604-29998698)
chr2 (181-258)||(30783334-30783411)
chr2 (181-258)||(31266350-31266427)
chr2 (191-258)||(23858019-23858086)
chr2 (181-275)||(26687736-26687830)
chr2 (189-258)||(13613155-13613224)
chr2 (181-250)||(23388448-23388517)
chr2 (181-258)||(27523007-27523084)
chr2 (181-258)||(32008948-32009025)
chr2 (181-250)||(32300447-32300516)
chr2 (181-258)||(37724054-37724131)
chr2 (181-258)||(41637614-41637691)
chr2 (181-244)||(28262360-28262423)
chr2 (191-258)||(37552233-37552300)
chr2 (181-243)||(8430292-8430354)
chr2 (181-243)||(21293788-21293850)
chr2 (181-243)||(32185828-32185890)
chr2 (181-275)||(40018798-40018892)
chr2 (181-250)||(1141532-1141601)
chr2 (181-258)||(13788117-13788194)
chr2 (181-250)||(15636805-15636874)
chr2 (189-250)||(28319649-28319710)
chr2 (181-258)||(28841404-28841481)
chr2 (220-275)||(35697490-35697545)
chr2 (193-251)||(14757190-14757248)
chr2 (181-275)||(18916445-18916539)
chr2 (181-251)||(29749472-29749542)
chr2 (181-258)||(9004370-9004447)
chr2 (181-250)||(20065144-20065213)
chr2 (181-250)||(22140434-22140503)
chr2 (181-258)||(41736168-41736245)
chr2 (181-245)||(18551328-18551392)
chr2 (189-245)||(27327620-27327676)
chr2 (195-251)||(43408580-43408636)
chr2 (191-258)||(12779606-12779673)
chr2 (203-258)||(44476437-44476492)
chr2 (183-258)||(44722930-44723005)
chr2 (181-275)||(9590466-9590560)
[»] scaffold0076 (1 HSPs)
scaffold0076 (181-258)||(26483-26560)
[»] scaffold0006 (2 HSPs)
scaffold0006 (183-251)||(121056-121124)
scaffold0006 (195-258)||(84736-84799)
[»] scaffold0047 (1 HSPs)
scaffold0047 (181-260)||(58582-58661)
[»] scaffold0019 (1 HSPs)
scaffold0019 (181-260)||(173444-173523)
[»] scaffold0599 (1 HSPs)
scaffold0599 (181-251)||(7505-7575)
[»] scaffold0058 (1 HSPs)
scaffold0058 (181-251)||(74610-74680)
[»] scaffold0007 (4 HSPs)
scaffold0007 (61-150)||(190258-190350)
scaffold0007 (189-258)||(3750-3819)
scaffold0007 (181-258)||(202774-202851)
scaffold0007 (181-245)||(276209-276273)
[»] scaffold0717 (1 HSPs)
scaffold0717 (181-258)||(981-1058)
[»] scaffold0603 (1 HSPs)
scaffold0603 (181-258)||(6041-6118)
[»] scaffold0219 (1 HSPs)
scaffold0219 (181-258)||(19603-19680)
[»] scaffold0023 (1 HSPs)
scaffold0023 (181-250)||(39773-39842)
[»] scaffold0001 (3 HSPs)
scaffold0001 (181-258)||(8172-8249)
scaffold0001 (181-258)||(21904-21981)
scaffold0001 (181-244)||(84303-84366)
[»] scaffold0108 (1 HSPs)
scaffold0108 (181-258)||(12653-12729)
[»] scaffold0087 (1 HSPs)
scaffold0087 (181-250)||(37857-37926)
[»] scaffold0069 (1 HSPs)
scaffold0069 (181-258)||(10158-10235)
[»] scaffold0062 (1 HSPs)
scaffold0062 (181-258)||(43917-43994)
[»] scaffold0240 (1 HSPs)
scaffold0240 (191-251)||(15059-15119)
[»] scaffold0014 (1 HSPs)
scaffold0014 (191-258)||(22221-22288)
[»] scaffold0024 (1 HSPs)
scaffold0024 (181-251)||(112328-112398)
[»] scaffold0161 (1 HSPs)
scaffold0161 (189-248)||(6803-6862)
[»] scaffold0128 (1 HSPs)
scaffold0128 (191-258)||(10725-10792)
[»] scaffold0009 (2 HSPs)
scaffold0009 (195-258)||(182544-182607)
scaffold0009 (193-245)||(219648-219700)
[»] scaffold0035 (1 HSPs)
scaffold0035 (181-258)||(74779-74857)
[»] scaffold0002 (1 HSPs)
scaffold0002 (195-245)||(439977-440027)


Alignment Details
Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 283
Target Start/End: Complemental strand, 16472491 - 16472217
Alignment:
Q  13 catcaccatcatctttaccaacatcctaactatcatatcaaactcagccccagacaaaacatcttattcatcattaaccataacctaacttagattatct 112  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| || |||||| |    
T  16472491 catcaccatcatcttcaccaacaacctaactatcatatcaaactcagccccagacaaaacatcttattcaccattaaccataatctaatttggattattt 16472392  T
Q  113 taacttccacctaattcaacattg---ctaccaccactttgagcatcattatattactnnnnnnnnnnnnnttagtgacggaaatttagagagggaaaaa 209  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||               ||||||||||||||||||||||| |||||    
T  16472391 taacttccacctaattcaacattgcctctaccaccactttgagcatcattatattataaaaaaaataaaaattagtgacggaaatttagagaggaaaaaa 16472292  T
Q  210 gtgaaatcgttctctaattccgtcactaaa-ttttgcaaccaaagaattttttaaagattttattttcttcgaca 283  Q
    ||| ||||| |||||||||| ||||||||| |||||| ||||| |||||||| || ||||||||||| |||||||    
T  16472291 gtggaatcgctctctaattctgtcactaaacttttgcgaccaacgaatttttgaaggattttatttttttcgaca 16472217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 16465365 - 16465221
Alignment:
Q  20 atcatctttaccaacatcctaactatcatatcaaactcagccccagacaaaacatcttattcatcattaaccataacctaacttagattatcttaacttc 119  Q
    |||||||| |||||||| || |||||||||||||| ||| ||| ||| |||||| ||||||||||||| ||  ||||||||||| |||||||||||||||    
T  16465365 atcatcttcaccaacattctgactatcatatcaaattcatccctagataaaacaccttattcatcattgactgtaacctaacttggattatcttaacttc 16465266  T
Q  120 cacctaattcaacatt---gctaccaccactttgagcatcattat 161  Q
    || |||||||||||||    |||||||||| ||||||||||||||    
T  16465265 catctaattcaacattccctctaccaccacattgagcatcattat 16465221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 27428151 - 27428052
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttattttcttcg 280  Q
    ||||||| | |||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||| |||   |||||||||| ||||    
T  27428151 ttagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttttttcg 27428052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 32726865 - 32726788
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||||||||||||| |||||||   |||||||||||||||||||||||||| ||||| ||||||    
T  32726865 ttagtgaaggaaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaattt 32726788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 20959508 - 20959570
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  20959508 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaatttt 20959570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 8886990 - 8886913
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  8886990 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 8886913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 17039770 - 17039693
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||| ||| ||||||||| ||||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  17039770 ttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 17039693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 23423895 - 23423818
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||  ||||||||| |||||||||  |||||||  |||||||||||||||||||||||||||||||| ||||||    
T  23423895 ttagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaattt 23423818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 33818700 - 33818623
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  33818700 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 33818623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 12045727 - 12045789
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||||| ||||||||| || ||||| |||||||||||||||||||||||||    
T  12045727 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaatttt 12045789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 13620266 - 13620172
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||||||||||||| |||||||||  |||||||  |||||||||| ||||| ||||||||| |||||  ||||| | | ||||||||||||    
T  13620266 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttatttt 13620172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 618294 - 618371
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  618294 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 618371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 22649459 - 22649406
Alignment:
Q  190 gaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  22649459 gaaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 23975635 - 23975704
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  23975635 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 23975704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 35620470 - 35620405
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||| |||||||||  ||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  35620470 atttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaattt 35620405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 36196394 - 36196463
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  36196394 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgacca 36196463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 11927925 - 11927861
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||| |||||||| |||||| ||||||||  ||||||||||||||||||||||||||    
T  11927925 ttagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgc 11927861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 23408980 - 23409044
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||||||||| ||||||||| || |||||  ||||||||||||||||||||||||||    
T  23408980 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgc 23409044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 746993 - 746930
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| ||||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  746993 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 746930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 25397913 - 25397850
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||||||||||    
T  25397913 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 25397850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 17079405 - 17079499
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| ||||||||||| ||||||||  | |||||  |||||||||||||||||||||||||| |||||  ||||| | |  |||||||||||    
T  17079405 ttagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttatttt 17079499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 7003867 - 7003805
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||||    
T  7003867 ttagtgagggaaattttgtgagggaaaacgtgaaatc--tctctaattccgtcactaaattttgc 7003805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 15060973 - 15061042
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | |||| |||| ||||||||  |||||||||||||||||||||||||| ||||    
T  15060973 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 15061042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 16121978 - 16121901
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||  ||||| ||||||    
T  16121978 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaattt 16121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 17986729 - 17986806
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  ||||||  ||||||||||||||||||||||||||| || || ||||||    
T  17986729 ttagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaattt 17986806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 25673367 - 25673290
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||  |||||  |||||||  ||||||||||||||||| |||||||| ||||||||||||    
T  25673367 ttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaattt 25673290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 33816897 - 33816820
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  ||||||   | |||||||||||||||||||||||| ||||| ||||||    
T  33816897 ttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaattt 33816820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 36832029 - 36831952
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  ||||||||||| |||||||||||||  ||||| ||||||    
T  36832029 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaattt 36831952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 24138970 - 24138910
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaa 24138910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 4125313 - 4125258
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||| ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  4125313 ttagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgacca 4125258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 10494751 - 10494814
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  10494751 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 10494814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 26708714 - 26708647
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || ||||   |||||||||||||||||||||||||| ||||| ||||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 26708647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 26978448 - 26978381
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || ||||   |||||||||||||||||||||||||| ||||| ||||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 26978381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 40484058 - 40484121
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  40484058 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 40484121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 17036540 - 17036474
Alignment:
Q  192 aatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||||||||||||| |  |||||  |||||||||| ||||||||||||||| ||||| ||||||    
T  17036540 aatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaattt 17036474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 25652719 - 25652645
Alignment:
Q  184 gtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||| ||||||||| || |||||  |||||||||||||||| ||||||||| || || ||||||    
T  25652719 gtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaattt 25652645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 2472841 - 2472776
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||| |||||||||  |||||||  ||||||||||||||| |||||||||| ||||| ||||||    
T  2472841 atttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaattt 2472776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 7888797 - 7888874
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||||| ||||||||| || |||||  ||||||| |||||||||||||||| | ||||| ||||||    
T  7888797 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaattt 7888874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 13974217 - 13974156
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattt 242  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||| |||||||||||||||||    
T  13974217 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaattt 13974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 36716339 - 36716262
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||| | ||||||||| |||||||| |||||||||||| ||| |||||||| | |||| |||||||    
T  36716339 ttagtgaggaaaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaattt 36716262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 12328365 - 12328301
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| ||| |||||| |||||||||  ||||||   ||||||||||||||||||||||||||    
T  12328365 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgc 12328301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 625995 - 626113
Alignment:
Q  14 atcaccatcatctttaccaacatcctaactatcat-atcaaactcagccccagacaaaacatcttattcatcattaaccataacctaacttagattatct 112  Q
    |||| ||||||||| || |||||||  || ||||| |||||||||| ||  ||| ||||||  |||||||||||||||| ||||| |||||  ||||| |    
T  625995 atcatcatcatcttcacgaacatcccgaccatcatcatcaaactcaacct-agataaaacactttattcatcattaaccgtaaccaaacttgaattattt 626093  T
Q  113 taacttccacctaattcaac 132  Q
    |||| ||||||| |||||||    
T  626094 taacctccaccttattcaac 626113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 5982655 - 5982722
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| |||||||||  | |||||  |||||||||||||||||||| ||||| ||||| ||||||    
T  5982655 aaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaattt 5982722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 275
Target Start/End: Complemental strand, 31853212 - 31853133
Alignment:
Q  196 tagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||| ||||  |||||||  |||||||||||||||||||||||||| |||| | ||||| | |  |||||||||||    
T  31853212 tagagaggaaaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagggattttatttt 31853133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 38837796 - 38837733
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  ||||||||||| |||||||||||||| ||||| ||||||    
T  38837796 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaattt 38837733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 10420391 - 10420321
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| | || |||||||||||||||  |||||||  |||||||||  ||||||||||||||| |||||    
T  10420391 ttagtgaggaaattttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaa 10420321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 26301919 - 26301965
Alignment:
Q  197 agagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    |||||||||||| ||||||| | ||||||||||| ||||||||||||    
T  26301919 agagagggaaaacgtgaaattgctctctaattccatcactaaatttt 26301965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 8108999 - 8108930
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||  ||||||| | |||||||||  ||||||   |||||||||||||||||||||||||| ||||    
T  8108999 ttagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgacca 8108930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 17772093 - 17772028
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttt 260  Q
    |||| |||||||||  | |||||  |||||||||||||||||||||||||| | ||| ||||||||    
T  17772093 ttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaattttt 17772028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 28265606 - 28265545
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||| | ||||||| | || |||||  |||||||||||||||||||||||||| ||||    
T  28265606 ggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgacca 28265545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 129
Target Start/End: Original strand, 25052479 - 25052599
Alignment:
Q  10 catcatcaccatcatctttaccaacatcctaactatcat-atcaaactcagccccagacaaaacatcttattcatcattaaccataacctaacttagatt 108  Q
    |||||||| ||||||||| |||| ||||||||||||||| |||||||||| ||||| | |||||||||||||||||||||||| |||||||||||  |||    
T  25052479 catcatcatcatcatcttcaccaccatcctaactatcatcatcaaactcaaccccaaataaaacatcttattcatcattaaccgtaacctaacttgaatt 25052578  T
Q  109 atcttaacttccacctaattc 129  Q
    || ||| | ||||||||||||    
T  25052579 attttagcctccacctaattc 25052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 28389969 - 28390063
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| ||||| |||||| | | ||||||||||||    
T  28389969 ttagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttatttt 28390063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 27449084 - 27449161
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||||||||||    
T  27449084 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 27449161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 256
Target Start/End: Complemental strand, 7623670 - 7623595
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaat 256  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||    
T  7623670 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaat 7623595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 21020061 - 21020155
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| || | ||||| |||||||||  | ||||| ||||||||||||||||||||||||||||||||| |||||| | | ||||||||||||    
T  21020061 ttagtgagggcagtttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttatttt 21020155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 27212920 - 27212826
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| ||||||||||||||| |||| ||||||||  ||| |||||||||||||||||||||| || ||||||||| | |  |||||||||||    
T  27212920 ttagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttatttt 27212826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 11085481 - 11085404
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||  ||||||||| ||||||||  ||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  11085481 ttagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 11085404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 26830581 - 26830512
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||||||||||||||| ||||||||  |||||||||||||||| ||||||||| ||||    
T  26830581 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgacca 26830512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 19610335 - 19610411
Alignment:
Q  182 tagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  19610335 tagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 19610411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 23217337 - 23217270
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||||  |||| |||||||    
T  23217337 aaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaattt 23217270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 1628211 - 1628273
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||||| ||||||||||||||    
T  1628211 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaatttt 1628273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 11007822 - 11007752
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  11007822 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 11007752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 11915754 - 11915824
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  11915754 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 11915824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 36543745 - 36543839
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||||||| | |||||||||  |||||||  ||||||||| |||||||||||||||| |||||||||| | | | ||||||||||||    
T  36543745 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttatttt 36543839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 5260933 - 5261010
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||| ||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  5260933 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 5261010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 16299857 - 16299934
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||| | |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  16299857 ttagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 16299934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 17582440 - 17582371
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  17582440 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 17582371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 17762638 - 17762715
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||| |||||||||||||||||||||||||  ||||| ||||||    
T  17762638 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaattt 17762715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 18539800 - 18539869
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  18539800 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 18539869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 19063958 - 19064035
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||| |||||||||||||||||||||||||  ||||| ||||||    
T  19063958 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaattt 19064035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 19270003 - 19269926
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  ||| |||||||||||||||||||||| ||||| ||||||    
T  19270003 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattt 19269926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 19545506 - 19545583
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||| |||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 19545583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 25882566 - 25882643
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||| | ||||||||||||    
T  25882566 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaattt 25882643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 29215988 - 29216065
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  ||||||||||| |||||||||||||| ||||| ||||||    
T  29215988 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaattt 29216065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 30219334 - 30219411
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||| ||||  |||||||  |||||||||||||||||||||||||| |||||| |||||    
T  30219334 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaattt 30219411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 1311097 - 1311021
Alignment:
Q  182 tagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||| |||||||||| || |||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  1311097 tagtgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 1311021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 4393489 - 4393425
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||||    
T  4393489 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgc 4393425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 9652574 - 9652638
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||||    
T  9652574 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgc 9652638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 49915447 - 49915511
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||||||||| |||||||||  |||||||  ||||||||||||||||||||||||||    
T  49915447 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgc 49915511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 13921331 - 13921398
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  13921331 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 13921398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 28859597 - 28859664
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| |||| |||| || |||||  |||||||||||||||||||||||||||||||| ||||||    
T  28859597 aaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaattt 28859664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 46942486 - 46942553
Alignment:
Q  184 gtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||| |||| ||||||||||||||| ||||||||  |||||||||| ||||||||||||||| |||||    
T  46942486 gtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaa 46942553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 48404866 - 48404933
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 48404933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 27968911 - 27968981
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||||||||||||||| |||||||||  |||||||  |||||||||| |||| |||||||||| |||||    
T  27968911 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaa 27968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 31433733 - 31433827
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||| |||||| |||||||| |||||||   |||||||||||||||||||||||| | ||||| |||||| | | | ||||||||||    
T  31433733 ttagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttatttt 31433827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 8428167 - 8428244
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||| | ||||| ||||||    
T  8428167 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaattt 8428244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 8543465 - 8543534
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||| |||||||||| ||||    
T  8543465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgacca 8543534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 18091686 - 18091609
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  | |||||  |||||||||||||||||||||||||| |||||| |||||    
T  18091686 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaattt 18091609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 18104669 - 18104600
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | |||||||||  |||||||  |||||||||||||||||||||||||| ||||    
T  18104669 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgacca 18104600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 19223445 - 19223522
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| | ||||||| || |||||  |||||||||||||||||||||||| | ||||| ||||||    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaattt 19223522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 20088405 - 20088490
Alignment:
Q  190 gaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||||| |||| ||||  ||||||| |||||||||||| |||||||||||||  |||||||||||| | | | ||||||||||    
T  20088405 gaaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatttt 20088490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 29236050 - 29236110
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 29236110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 1745612 - 1745549
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  1745612 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaattt 1745549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 15064117 - 15064054
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  15064117 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaattt 15064054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 15490031 - 15490129
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttattttcttcg 280  Q
    ||||||| |||||||||| ||| ||||| ||||||||  ||| |||||  ||||||||||||||| |||||| ||||| | | |||||||||||| ||||    
T  15490031 ttagtgagggaaatttagtgagagaaaacgtgaaatccctctttaattt-gtcactaaattttgcgaccaaaaaatttgtgagagattttatttttttcg 15490129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 21816727 - 21816794
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || ||||   |||||||||||||||||||||||||| ||||| ||||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 21816794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 23773487 - 23773550
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  23773487 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 23773550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 26098823 - 26098886
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  26098823 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 26098886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 43329888 - 43329825
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || ||||| ||||||||||||||||||||||||| | ||||| ||||||    
T  43329888 ttagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaattt 43329825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 20615482 - 20615388
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| ||||||||||||| |||||| |||||||   |||||||||| |||| |||||||| | |||||| ||||| | | | ||||||||||    
T  20615482 ttagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttatttt 20615388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 26963380 - 26963294
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||||| ||||||||| || ||||   ||||||||||||| |||||||||| ||||||||| |||| | ||| |||| |||||    
T  26963380 ggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcatttt 26963294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 8110335 - 8110412
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || ||||   ||||||||||||||| |||||||| | ||||| ||||||    
T  8110335 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaattt 8110412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 29956376 - 29956437
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||| | ||||||||| ||||||||  | |||||||||||||||||||||||| ||||    
T  29956376 ggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgacca 29956437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 30005531 - 30005592
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||| | ||||||||| ||||||||  | |||||||||||||||||||||||| ||||    
T  30005531 ggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgacca 30005592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 5565732 - 5565812
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||| ||||||||| ||||||||  |||||||||  ||||||||||||||| |||||  ||||| | | ||||||||||||    
T  5565732 ttagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttatttt 5565812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 11219134 - 11219198
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| | |||||| | ||||||||| ||||||||  ||||||||||||||| ||||||||||    
T  11219134 ttagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgc 11219198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 13905163 - 13905107
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  13905163 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 13905107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 29704171 - 29704107
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||||||| | ||| ||||| ||||||||  ||| ||||||||||||||||||||||    
T  29704171 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgc 29704107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 5744426 - 5744489
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  |||||||||||||||||||||||||| || || ||||||    
T  5744426 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaattt 5744489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 5781385 - 5781448
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  |||||||||||||||||||||||||| || || ||||||    
T  5781385 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaattt 5781448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 11837339 - 11837276
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  ||||||   |||||||||||||||||||||||| | ||||||||||||    
T  11837339 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaattt 11837276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 17269713 - 17269666
Alignment:
Q  211 tgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||  |||||||||||||||||||||||||| | ||||||||||    
T  17269713 tgaaatccctctctaattccgtcactaaattttgcgatcaaagaattt 17269666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 21490159 - 21490096
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||| ||||||||||||||| ||||| ||||||    
T  21490159 ttagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaattt 21490096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 31250087 - 31250154
Alignment:
Q  184 gtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||| ||||||||||||||||||||    |||||  |||||||||| ||||||||||||||| |||||    
T  31250087 gtgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaa 31250154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 256
Target Start/End: Complemental strand, 36564578 - 36564503
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaat 256  Q
    ||||||| |||||||| | ||||||||   |||||||  ||||||||| |||||||||||| ||| ||||||||||    
T  36564578 ttagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaat 36564503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 50665761 - 50665698
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  ||||||||| |||||||||||||||| | ||||||||||    
T  50665761 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaattt 50665698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 6718725 - 6718775
Alignment:
Q  200 gagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||||| ||||||||  | |||||||||||||||||||||||| ||||    
T  6718725 gagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgacca 6718775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 10941785 - 10941727
Alignment:
Q  200 gagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||  |||||||  ||||||||||| |||||||||||||| ||||| ||||||    
T  10941785 gagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaattt 10941727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 18380020 - 18380082
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||||  ||||||||| || |||||  ||| ||||||||||||||||||||    
T  18380020 ttagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaatttt 18380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 29451099 - 29451157
Alignment:
Q  190 gaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaac 248  Q
    ||||||||| ||||||||| || |||||  |||||||||||||| | ||||||||||||    
T  29451099 gaaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaac 29451157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 47968798 - 47968892
Alignment:
Q  10 catcatcaccatcatctttaccaacatcctaactatcat-atcaaactcagccccagacaaaacatcttattcatcattaaccataacctaactt 103  Q
    |||||||||||||| |||  |||| ||| |||| ||| | ||||||||||  |||| | |||||| |||||| ||||||||| ||||||||||||    
T  47968798 catcatcaccatcaccttcgccaatatcataaccatcgtcatcaaactcaatcccatataaaacaccttattaatcattaacgataacctaactt 47968892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 26390773 - 26390696
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||| | |||||| ||  |||||||  |||||||||||||||||||||||||  ||||| ||||||    
T  26390773 ttagtgagggatattttgtgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaattt 26390696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 35579654 - 35579605
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaat 240  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 8546265 - 8546305
Alignment:
Q  205 aaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||| ||||||||  ||||||||||||||||||||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgc 8546305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 27711268 - 27711236
Alignment:
Q  220 tctctaattccgtcactaaattttgcaaccaaa 252  Q
    |||||||||||||||||||||||||| ||||||    
T  27711268 tctctaattccgtcactaaattttgcgaccaaa 27711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 46012853 - 46012773
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||| |||||||||  |||||||  |||||||||  ||||||||||||||| | ||| |||||| | | ||||||||||||    
T  46012853 ttagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttatttt 46012773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 22501594 - 22501688
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||  ||||||||||| | ||||||||||||||    
T  22501594 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttatttt 22501688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 816330 - 816236
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| | ||||||||||| |||||| ||||||||  |||||||||||||||||||||||||| |||||||||||| | | ||||||| ||||    
T  816330 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgtttt 816236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 24605838 - 24605915
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||||| ||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  24605838 ttagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaattt 24605915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 40847574 - 40847497
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||||||||||    
T  40847574 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 40847497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 31042251 - 31042345
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||| ||||||||||||||| ||||||||  |||||||||| ||||||||||||||| ||||| |||||| | | | ||||||||||    
T  31042251 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttatttt 31042345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 10050975 - 10050898
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  10050975 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 10050898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 11852021 - 11852102
Alignment:
Q  194 tttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||||||  |||||||||||| | | | ||||||||||    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttatttt 11852102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 22486394 - 22486471
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| || |||||| ||||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  22486394 ttagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 22486471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 23577328 - 23577251
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| ||||||||  | |||||||||||||||||||||||| ||||| ||||||    
T  23577328 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaattt 23577251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 31425650 - 31425573
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||| |||||||    
T  31425650 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaattt 31425573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 47523789 - 47523712
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||||||||||    
T  47523789 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 47523712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 11036507 - 11036576
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  11036507 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 11036576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 20174020 - 20174089
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  20174020 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 20174089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 21917473 - 21917396
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  21917473 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 21917396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 23232039 - 23232116
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  | |||||||||||||||||||||||| ||||||||||||    
T  23232039 ttagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaattt 23232116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 23750875 - 23750798
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||| | ||||| ||||||    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaattt 23750798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 36636506 - 36636583
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  36636506 ttagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 36636583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 39979763 - 39979686
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  ||||||||||||||| |||||||||| ||||| ||||||    
T  39979763 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaattt 39979686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 20429465 - 20429527
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||    
T  20429465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 20429527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 20924097 - 20924003
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||| ||||||||||||||  |||||  ||||| | | ||||||||||||    
T  20924097 ttagtgatggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttatttt 20924003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 28800878 - 28800948
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| |||||    
T  28800878 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 28800948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 37135424 - 37135362
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||    
T  37135424 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 37135362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 1842902 - 1842971
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||| ||||||||| || |||||  || ||||||||||||||||||||||| ||||| ||||||    
T  1842902 ggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaattt 1842971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 15014544 - 15014467
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| || || ||||||    
T  15014544 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaattt 15014467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 18217829 - 18217906
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||| |||| || |||||  ||||||||| |||||||||||||||| ||||| ||||||    
T  18217829 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaattt 18217906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 24140450 - 24140527
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  | ||||| ||||| |||||||||| |||||||| | ||||||||||||    
T  24140450 ttagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaattt 24140527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 27806018 - 27806095
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||| | ||||| ||||||    
T  27806018 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaattt 27806095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 38057640 - 38057709
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||| ||||||||| ||||||||  ||| |||||||||||||||| ||||| ||||| ||||||    
T  38057640 ggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaattt 38057709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 45664768 - 45664845
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||| ||| ||||||||| || |||||  |||||||||||||||||||||||||| | ||| ||||||    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaattt 45664845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 1907355 - 1907430
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaat 256  Q
    ||||||| | |||| ||| |||||||||  |||||||  ||||||||| |||||||||||||||| ||||||||||    
T  1907355 ttagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaat 1907430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 4514779 - 4514842
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  ||||||||||| |||||||||||||| ||||||||||||    
T  4514779 ttagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaattt 4514842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 687877 - 687955
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaatttt 259  Q
    |||||||  ||||||||| ||||||||| || ||||| ||||||||||| ||||||||| ||||| || || |||||||    
T  687877 ttagtgagagaaatttagtgagggaaaatgtaaaatccttctctaattctgtcactaaactttgcgacaaaggaatttt 687955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 9698677 - 9698615
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||||| ||||||||| || ||||   ||||||||||||||||||||||||    
T  9698677 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaatttt 9698615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 25777243 - 25777157
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||||||||||||||| ||||||||  ||||||||| | |||||||||||| | | |||| ||||| | |  |||||||||||    
T  25777243 ggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttatttt 25777157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 2457670 - 2457747
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||| | |||||||||  |||||||  |||| ||||||||||||||||||||| || |||||||||    
T  2457670 ttagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaattt 2457747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 6849342 - 6849273
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||| |||| |||| || |||||  |||||||||||||||||||||||||| || || ||||||    
T  6849342 ggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaattt 6849273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 7733451 - 7733374
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||| ||||  |||||||  |||||||||||||| ||||||||||| ||||| ||||||    
T  7733451 ttagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaattt 7733374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 15969796 - 15969861
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||| |||||||||  ||||||   |||||||||||||||||||||||| | ||||||||||||    
T  15969796 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaattt 15969861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 27130342 - 27130396
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||||||||||||||||||| ||||||||   |||||||||||||||||| ||||||    
T  27130342 ggaaatttagagagggaaaatgtgaaatc--cctctaattccgtcactaacttttgc 27130396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 32267350 - 32267411
Alignment:
Q  184 gtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||| |||||||||||||||||||| |  |||||  |||||||||| |||||||||||||||    
T  32267350 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgc 32267411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 3904603 - 3904547
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  3904603 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 3904547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 42926559 - 42926495
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| ||| |||||| |||| ||||  |||||||  ||||||||||||||||||||||||||    
T  42926559 ttagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgc 42926495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 3872312 - 3872249
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||  ||||| ||||||    
T  3872312 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaattt 3872249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 21623031 - 21623098
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || |||||  ||||||||||| ||||||||||||||  |||| ||||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaattt 21623098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 26577279 - 26577342
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  |||||||| ||||||||||||||||| ||||| ||||||    
T  26577279 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaattt 26577342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 33427704 - 33427767
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  ||||||   |||||||||||||||||||||||| | ||||||||||||    
T  33427704 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaattt 33427767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 2650948 - 2650898
Alignment:
Q  200 gagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||||| || |||||  |||||||||||||||||||||||||| ||||    
T  2650948 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgacca 2650898  T

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Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 36993820 - 36993882
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||||| |||| ||||  |||||||  | ||||||||||||||||||||||    
T  36993820 ttagtgaaggaaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaatttt 36993882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 21871572 - 21871638
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| | |||||||| ||||||||| || |||||    |||||||||||||||||||||||| |||||    
T  21871572 ttagtgaggaaaatttagtgagggaaaatgtaaaatc----tctaattccgtcactaaattttgcgaccaa 21871638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 23699964 - 23699895
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||  ||||||| | ||||||||| ||||||||  ||| |||||| ||||||||||||||| ||||    
T  23699964 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgacca 23699895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 37205319 - 37205258
Alignment:
Q  49 atcaaactcagccccagacaaaacatcttattcatcattaaccataacctaacttagattat 110  Q
    |||||||||| || || | |||||| ||||||||||||||||| |||||| |||| ||||||    
T  37205319 atcaaactcaaccgcacataaaacaccttattcatcattaaccgtaacctgacttggattat 37205258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 48933136 - 48933205
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | |||  |||| |||||||   |||||||||||||||||||||||||| ||||    
T  48933136 ttagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtcactaaattttgcgacca 48933205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 1824325 - 1824269
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||| |||||||||  ||||||   |||||||||||||||||||||||||| |||||    
T  1824325 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaa 1824269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 2093487 - 2093439
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    |||| ||||||||| || |||||  ||||||||||||||||||||||||    
T  2093487 ttagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttt 2093439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 12845003 - 12845080
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  12845003 ttagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaattt 12845080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 9892963 - 9893040
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  9892963 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 9893040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 15364597 - 15364520
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || ||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  15364597 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaattt 15364520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 28364911 - 28364988
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||||||||||    
T  28364911 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 28364988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 21691635 - 21691541
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||| |||||||||| |||| ||||||||  ||||||||| |||||||||||||||| |||||||||||| | | | ||||||||||    
T  21691635 ttagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttt 21691541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 495766 - 495689
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  495766 ttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaattt 495689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 22579488 - 22579411
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  22579488 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaattt 22579411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 25398002 - 25398079
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  25398002 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 25398079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 2992615 - 2992692
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  2992615 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 2992692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 12351725 - 12351648
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||||||||||||| |||||||   ||||||||||||||| |||||||||| || || ||||||    
T  12351725 ttagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaattt 12351648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 12951708 - 12951785
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  ||||||||||||||| |||||||||| ||||| ||||||    
T  12951708 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaattt 12951785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 18033664 - 18033587
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||  |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  18033664 ttagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 18033587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 21140939 - 21141008
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  21140939 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 21141008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 22083838 - 22083915
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||| ||||||||| ||||| ||||||    
T  22083838 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaattt 22083915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 27705422 - 27705491
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  27705422 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 27705491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 27796973 - 27796896
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||||| ||| ||||||    
T  27796973 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaattt 27796896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 5270392 - 5270454
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||| ||||||||||||||| |||||||   ||||||||||||||||||||||||    
T  5270392 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaatttt 5270454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 6598464 - 6598534
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| |||||    
T  6598464 ttagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaa 6598534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 9885243 - 9885337
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||||| |||||||| |||||||||  |||||||  ||| |||||  |||||||||||||||||||||  ||||| | | ||||||||||||    
T  9885243 ttagtgacgaaaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttatttt 9885337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 11431779 - 11431686
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| ||||||||||||||| |||| | || |||  ||| ||||||||||||||||||||||||  ||||||||| | | ||||||||||||    
T  11431779 ttagtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgcaa-taaagaatttgtgagagattttatttt 11431686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 11049878 - 11049813
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  11049878 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaattt 11049813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 23281794 - 23281855
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  23281794 ggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 23281855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 24661148 - 24661071
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  ||||||||||||||| |||||||||| ||||| ||||||    
T  24661148 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaattt 24661071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 12680323 - 12680247
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaatt 257  Q
    ||||||| | |||||||||||||||||| |||||||   ||||||||||||||| |||||||| | | |||||||||    
T  12680323 ttagtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaatt 12680247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 20182145 - 20182209
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| | |||||| | ||||||||| ||||||||  ||||||||||||||||||||||||||    
T  20182145 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgc 20182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 22153846 - 22153782
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| | |||||| | ||||||||| ||||||||  ||||||||||||||||||||||||||    
T  22153846 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgc 22153782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 5192314 - 5192251
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||| | ||||||||||||    
T  5192314 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaattt 5192251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 13145016 - 13145079
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| ||||||||  ||| |||||||||||||||||||||| ||||| ||||||    
T  13145016 ttagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaattt 13145079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 14872133 - 14872196
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  ||||||||||||||||||||||||| |||||| ||||||    
T  14872133 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaattt 14872196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 14886561 - 14886636
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaat 256  Q
    ||||||| | |||||||| |||||||||  | |||||  |||||||||||||||||||||||| | ||||||||||    
T  14886561 ttagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaat 14886636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 5360428 - 5360486
Alignment:
Q  200 gagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||||| || |||||  |||||||||||||||||||||||||| |||||| |||||    
T  5360428 gagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaattt 5360486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 9060091 - 9060184
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||||||||| |||||||| | ||||||   |||||||||| ||||||||||||||| |||||| ||||| | |  |||||||||||    
T  9060091 ttagtgaaggaaatttagcgagggaaaca-tgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttatttt 9060184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 11530225 - 11530287
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| | |||||||| |||||||||  |||||||  ||||||||||||||||||||||||    
T  11530225 ttagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaatttt 11530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 21990313 - 21990243
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| | |||||||| ||||||||| || |||||  ||||||||||||||||||| |||||| |||||    
T  21990313 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaa 21990243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 26939599 - 26939657
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||| |||||||||  |||||||  |||||||||||||||||||||||||| |||||    
T  26939599 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 26939657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 30745847 - 30745764
Alignment:
Q  190 gaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||| |||||||||||||| ||||||||  ||||||| |||||||||||||||| | | |||| ||||| | || |||||||||||    
T  30745847 gaaaattagagagggaaaacgtgaaatc--tctctaagtccgtcactaaattttacgatcaaaaaatttgtaaatgattttatttt 30745764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 2669309 - 2669386
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| | || |||| || ||||   |||||||||||||||||||||||||| ||||| ||||||    
T  2669309 ttagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 2669386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 12157514 - 12157421
Alignment:
Q  182 tagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||| | ||||||||||||  ||||  ||||||| |||||||||||||||||||||||||   |||||||| ||| | |  |||||||||||    
T  12157514 tagtgaggaaaatttagagagcaaaaatatgaaatcattctctaattccgtcactaaattttatgaccaaagattttgtaagggattttatttt 12157421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 12200694 - 12200771
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  ||||||||||| |||||||||||| | ||||| ||||||    
T  12200694 ttagtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaattt 12200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 17919536 - 17919613
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||| ||  ||||||||  || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  17919536 ttagtgagggaaatgtaatgagggaaactgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 17919613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 16250941 - 16250877
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||||||  ||||||| | ||||||||| ||||||||  |||||||||| |||||||||||||||    
T  16250941 ttagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgc 16250877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 3673262 - 3673195
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| |||| |||| || ||||  ||||||||||||||||||||||||| | |||||| |||||    
T  3673262 aaatttagtgaggaaaaatgtaaaatttttctctaattccgtcactaaattttacgaccaaaaaattt 3673195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 11077663 - 11077726
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  |||||||| ||||||||||||||||| ||||| ||||||    
T  11077663 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaattt 11077726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 12499230 - 12499293
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  ||||||| |||||||||||||||||| |||||| |||||    
T  12499230 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaattt 12499293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 12506559 - 12506622
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  ||||||| |||||||||||||||||| |||||| |||||    
T  12506559 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaattt 12506622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 12509671 - 12509608
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  ||||||| |||||||||||||||||| |||||| |||||    
T  12509671 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaattt 12509608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 26224440 - 26224491
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttg 244  Q
    |||||| |||||||||  |||||||  |||||||||||||||||||||||||    
T  26224440 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 26224491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 6978316 - 6978354
Alignment:
Q  220 tctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  6978316 tctctaattccgtcactaaattttgcgaccaaggaattt 6978354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 15448395 - 15448449
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||||||| ||||||||| || |||||  ||||||||||||||| ||||||||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgc 15448449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 18048788 - 18048882
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||||||||| |||| ||||  |||||||  || |||||||  |||||||||||||| ||||| |||||| | | | ||||||||||    
T  18048788 ttagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttatttt 18048882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 1939381 - 1939304
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| ||| || ||| |||||  |||||||  ||||||||||||||| |||||||||| |||||| |||||    
T  1939381 ttagtgagggatattcagtgagagaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaattt 1939304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 18492389 - 18492438
Alignment:
Q  201 agggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||| ||||||||   ||||||||||||||||||||||||| ||||    
T  18492389 agggaaaacgtgaaatcccactctaattccgtcactaaattttgcgacca 18492438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 20692936 - 20692879
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaa 252  Q
    |||| ||||||||| || |||||  ||||||||| |||||||||||||||| ||||||    
T  20692936 ttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaa 20692879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 33250835 - 33250770
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||| |||||||||  ||||||   ||||||||||| |||||||||||||| ||||| ||||||    
T  33250835 atttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaattt 33250770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 12205306 - 12205262
Alignment:
Q  199 agagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    |||||||||| ||||||||  || |||||||||||||||||||||    
T  12205306 agagggaaaacgtgaaatccctcactaattccgtcactaaatttt 12205262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 19175902 - 19175846
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||| ||||||||| || ||||   |||||||||||||||||||||||||| |||||    
T  19175902 ttagtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaa 19175846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 33547560 - 33547640
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||| |||||||||  |||||||  | |||||||  ||||||||||||||| |||||||||||| | |  |||||||||||    
T  33547560 ttagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttatttt 33547640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 13523100 - 13523023
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||| ||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  13523100 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 13523023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 10253781 - 10253909
Alignment:
Q  11 atcatcaccatcatctttaccaacatcctaactatcat-atcaaactcagccccagacaaaacatcttattcatcattaaccataacctaacttagatta 109  Q
    |||||||| |||||||| || | ||||||||| ||||| |||||||||  ||||| | ||| || |||||| |||||||||| ||||||||||| |||||    
T  10253781 atcatcactatcatcttcactagcatcctaaccatcatcatcaaactctaccccaaataaatcaccttattgatcattaaccgtaacctaacttggatta 10253880  T
Q  110 tcttaacttccacctaattcaacattgct 138  Q
    | ||||| | |||||||||||||||||||    
T  10253881 ttttaacattcacctaattcaacattgct 10253909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 22603548 - 22603625
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||| |||||||||||||||||||||||||| | ||||||||||    
T  22603548 ttagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaattt 22603625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 41071974 - 41071897
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||||||||||    
T  41071974 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 41071897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 41752433 - 41752527
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| |||||| | ||| ||||||||||    
T  41752433 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttatttt 41752527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 12370080 - 12370003
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||||||||||  ||||||||  | ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  12370080 ttagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaattt 12370003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 14760867 - 14760944
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  || ||||||||||||||||||||||| ||||||||||||    
T  14760867 ttagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaattt 14760944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 38531309 - 38531232
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||| || || ||||||    
T  38531309 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaattt 38531232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 19081728 - 19081822
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||| ||||||||||||||| ||||||||  |||||||||| ||||||||||||| | ||||| |||||| | | | ||||||||||    
T  19081728 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttatttt 19081822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 19129616 - 19129710
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||| ||||||||||||||| ||||||||  |||||||||| ||||||||||||| | ||||| |||||| | | | ||||||||||    
T  19129616 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttatttt 19129710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 6459217 - 6459294
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  6459217 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 6459294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 9259322 - 9259253
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  9259322 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgacca 9259253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 9464103 - 9464172
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  9464103 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 9464172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 12161814 - 12161883
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  12161814 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 12161883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 12720809 - 12720886
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  12720809 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 12720886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 14486771 - 14486698
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaaga 254  Q
    ||||||| | |||||||||||||||||| ||||||||  ||||||||||||||||| |||||||| | ||||||    
T  14486771 ttagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttgcgatcaaaga 14486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 15243085 - 15243162
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| ||||||||  | |||||||||||||||||||||||| | ||| ||||||    
T  15243085 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaattt 15243162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 22158802 - 22158871
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  22158802 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 22158871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 22789730 - 22789661
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||||||||||||||| ||||||||  | |||||||| ||||||||||||||| ||||    
T  22789730 ttagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgacca 22789661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 23457897 - 23457966
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  23457897 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 23457966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 45839292 - 45839369
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  45839292 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 45839369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 52183678 - 52183747
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  52183678 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 52183747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 4340417 - 4340484
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 4340484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 12174903 - 12174828
Alignment:
Q  183 agtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||| ||| |||||| |||||||||  ||||||| ||||||||||||||||||||||||||| || || ||||||    
T  12174903 agtgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaattt 12174828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 256
Target Start/End: Complemental strand, 16258625 - 16258550
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaat 256  Q
    ||||||| | ||||||||||||| |||| |||||| |  ||| |||||||||||||||||||||||||||| ||||    
T  16258625 ttagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaat 16258550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 256
Target Start/End: Complemental strand, 18895039 - 18894964
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaat 256  Q
    ||||||| | |||||||| |||||||||  |||||||  ||||||||| |||||||||||||||| ||||||||||    
T  18895039 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaat 18894964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 29549418 - 29549517
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttattttcttcg 280  Q
    ||||||| |||||||||| ||||||||| || |||||  ||||||||||||||||||||||| || || ||| ||||| | | | |||||||||| ||||    
T  29549418 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcg 29549517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 50845459 - 50845392
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  50845459 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 50845392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 9110114 - 9110044
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| |||||    
T  9110114 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 9110044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 12989852 - 12989946
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||||||| ||||||||||| ||||||||  || ||||||| ||||||||| ||||| ||||| |||||| | | | ||||||||||    
T  12989852 ttagtgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttatttt 12989946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 7830031 - 7830108
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  || |||||| |||||||||||||||| ||||| ||||||    
T  7830031 ttagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaattt 7830108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 13102316 - 13102393
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  | |||||  | |||||||||||||||||||||||| ||||| ||||||    
T  13102316 ttagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaattt 13102393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 20408299 - 20408230
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||| |||||||||||| ||||    
T  20408299 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgacca 20408230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 26825248 - 26825317
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||||||||| |||||||   |||||||||||||||||||||||| | | ||||||||||    
T  26825248 ggaattttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaattt 26825317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 11917799 - 11917863
Alignment:
Q  194 tttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||||||||||| ||||| ||  | |||||||||||||||||||||||| |||||| |||||    
T  11917799 tttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataattt 11917863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 41120866 - 41120806
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 41120806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 7181694 - 7181631
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttg 244  Q
    ||||||| |||||||| |  |||||||| ||||||||  |||||||||||||||||||||||||    
T  7181694 ttagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattttg 7181631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 19865258 - 19865321
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  19865258 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 19865321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 6412192 - 6412122
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| ||| |||||| |||||||||  |||||||  ||| |||||||||||||||||||||| |||||    
T  6412192 ttagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaa 6412122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 16913716 - 16913654
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| ||||||||||||||||||||  |||||||  ||||||||||||| | ||||||||    
T  16913716 ttagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaatttt 16913654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 18788049 - 18787974
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||||||||| |||||||||| |||| |||  |||||||||  ||||||||||||||| |||||| |||||    
T  18788049 ttagtgagggaaatttaaagagggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaaaaattt 18787974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 20290459 - 20290397
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    |||||||  ||||||| | ||| ||||| |||||||| |||||||||||||||||||||||||    
T  20290459 ttagtgagagaaattttgtgagagaaaacgtgaaatcattctctaattccgtcactaaatttt 20290397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 32046876 - 32046946
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| |||||| ||| ||||||||| || |||||  |||||||||||| ||||||||||||| |||||    
T  32046876 ttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaa 32046946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 41359027 - 41359065
Alignment:
Q  220 tctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  41359027 tctctaattccgtcactaaattttgcgaccaaagaattt 41359065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 9985466 - 9985389
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||| | |||| |||| || |||||  ||||||||||||||| |||||||| | ||||||||||||    
T  9985466 ttagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaattt 9985389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 13195586 - 13195647
Alignment:
Q  184 gtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||| |||||||||||||||||||| |  |||||  |||||||||| |||||||||||||||    
T  13195586 gtgagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgc 13195647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 17200149 - 17200072
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||| ||||  | ||||  |||| |||||||||||||||||||||| ||||| ||||||    
T  17200149 ttagtgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaattt 17200072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 17661050 - 17661119
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| |||||||   ||||||||||| |||||||||||||| ||||    
T  17661050 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgacca 17661119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 18890688 - 18890619
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||| ||||| ||||||||  ||||||||||||| |||||||||||| ||||    
T  18890688 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgacca 18890619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 51973432 - 51973493
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||| | ||||||||| |||||||   |||||||||||||||||||||||||| ||||    
T  51973432 ggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgacca 51973493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 46786087 - 46786027
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||||| ||||||||| || |||||  ||||||||||||||| |||||||||| |||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaa 46786027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 46865243 - 46865307
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| ||||||| ||||||||| || ||||||||  ||||||||||| | ||||||||||||    
T  46865243 ttagtgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattttgc 46865307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 28229580 - 28229517
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  ||||||||||| |||||||||||||| ||||| ||||||    
T  28229580 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaattt 28229517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 30928478 - 30928423
Alignment:
Q  220 tctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||||||  |||||||||||||| ||||| |||||| ||| ||||||||||||    
T  30928478 tctctaattctctcactaaattttgcgaccaaggaatttgttagagattttatttt 30928423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 41063197 - 41063272
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaat 256  Q
    ||||||| | |||||||| |||| ||||  | |||||  |||||||||||||||||||||||||| | ||||||||    
T  41063197 ttagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaat 41063272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 46790014 - 46790077
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  | ||||||||||||| |||||||||| ||||||||||||    
T  46790014 ttagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaattt 46790077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 50092428 - 50092374
Alignment:
Q  190 gaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttg 244  Q
    ||||||| | |||||||||  |||||||  |||||||||||||||||||||||||    
T  50092428 gaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttg 50092374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 20580909 - 20580986
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||  ||| ||||||||||||||| ||||||||  ||||||||| ||| | |||||||||| || || ||||||    
T  20580909 ttagtgagagaattttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaattt 20580986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 46339564 - 46339507
Alignment:
Q  201 agggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||||  |||||||  |||||||||||||||||||||||||| || || ||||||    
T  46339564 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaattt 46339507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 13295075 - 13295039
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatc 217  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  13295075 ttagtaacggaaatttagagagggaaaacgtgaaatc 13295039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 29093693 - 29093629
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| ||||||||||||| |||||| || ||||   ||||||||||| ||| ||||||||||    
T  29093693 ttagtgagggaaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgc 29093629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 8878881 - 8878975
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||||||||||||| |||||||||  |||||||  |||||||||| ||||||||||||||| ||||| |||||| | | ||||||||||||    
T  8878881 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttatttt 8878975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 22128451 - 22128357
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||||||||| ||||||||| ||||||||  |||||||||| ||||||||||||||| ||||| |||||| | | ||||||||||||    
T  22128451 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttatttt 22128357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 5399607 - 5399684
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||||||||| ||||||    
T  5399607 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaattt 5399684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 25147719 - 25147796
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||||||||||    
T  25147719 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 25147796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 30269127 - 30269050
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||| |||||    
T  30269127 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataattt 30269050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 30283062 - 30283139
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||| |||||    
T  30283062 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataattt 30283139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 55309352 - 55309275
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  55309352 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 55309275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 16915367 - 16915461
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||||||||||||| |||||||||  |||||||  |||||||||  ||||||||||||||| |||||  ||||| | | ||||||||||||    
T  16915367 ttagtgacggaaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttatttt 16915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 32175876 - 32175806
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 32175806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 138
Target Start/End: Original strand, 12266442 - 12266571
Alignment:
Q  10 catcatcaccatcatctttaccaacatcctaactatcat-atcaaactcagccccagacaaaacatcttattcatcattaaccataacctaacttagatt 108  Q
    |||||||||||||||||| || | |||||| || ||| | |||||| | |  | |||| ||||||||||||||| |||||||| ||||||||||| ||||    
T  12266442 catcatcaccatcatcttcactagcatcctgaccatcttcatcaaaataaatctcagataaaacatcttattcaccattaaccgtaacctaacttggatt 12266541  T
Q  109 atcttaacttccacctaattcaacattgct 138  Q
       ||||| |||| ||||||||||||||||    
T  12266542 gatttaacctccaactaattcaacattgct 12266571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 22156740 - 22156663
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  22156740 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 22156663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 27040164 - 27040095
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  27040164 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 27040095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 33914057 - 33914134
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||| ||||  |||||||  |||||||||||||||||||||||||| |||||| |||||    
T  33914057 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaattt 33914134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 36689683 - 36689752
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||| | ||||||| ||||||||  |||||||||||||||||||||||||| |||||| |||||    
T  36689683 ggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaattt 36689752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 46286368 - 46286299
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  46286368 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 46286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 4606954 - 4606874
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||  ||||  ||||| | | ||||||||||||    
T  4606954 ttagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttatttt 4606874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 18051837 - 18051901
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||||    
T  18051837 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgc 18051901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 9913259 - 9913326
Alignment:
Q  184 gtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||| |||| ||||||||||||||| ||||||||  |||||||||| ||||||||||||||| |||||    
T  9913259 gtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaa 9913326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 19839187 - 19839254
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  19839187 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 19839254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 37761971 - 37761912
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||| ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  37761971 aaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 37761912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 18744209 - 18744147
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||    
T  18744209 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 18744147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 38223511 - 38223585
Alignment:
Q  184 gtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||||||||||||| |  |||||  |||||||||| ||||||||||||||| ||||| ||||||    
T  38223511 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaattt 38223585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 45091282 - 45091336
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||||||| ||||||||| || ||||| |||||||||||||||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgc 45091336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 2275817 - 2275740
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| | ||| ||||||    
T  2275817 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaattt 2275740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 37378762 - 37378693
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | |||||||||  |||||||  |||||||||||||||||||||||||| ||||    
T  37378762 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgacca 37378693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 5473847 - 5473923
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaatt 257  Q
    ||||||| | |||||||| ||||||||| || |||||  ||| |||||||||||||||||||||| ||||| |||||    
T  5473847 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatt 5473923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 13028945 - 13028885
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 13028885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 45532718 - 45532654
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||||||||| ||||||||| || |||||  ||||||||||||||| ||||||||||    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgc 45532654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 1638445 - 1638520
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaat 256  Q
    ||||||| | |||||||| |||||||||  ||||||   || ||||||||||||||||||||||| ||||||||||    
T  1638445 ttagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaat 1638520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 25026565 - 25026632
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| || || ||||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaattt 25026632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 30507999 - 30508062
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  30507999 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 30508062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 38619859 - 38619922
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||| | ||||||||||||    
T  38619859 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaattt 38619922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 38645762 - 38645825
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  ||||||| |||||||||||||||||| ||||||||||||    
T  38645762 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaattt 38645825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 13565054 - 13564992
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||||| ||||||||| || ||||   ||||||||||||||||||||||||    
T  13565054 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaatttt 13564992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 29238429 - 29238515
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||||| |||| ||||  | |||||  | |||||||| |||||||||||||| ||||||||||||| | | ||||||||||||    
T  29238429 ggaaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttatttt 29238515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 29625337 - 29625387
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||| ||||||||| ||||||||  ||||||||||||||||||||||||||    
T  29625337 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgc 29625387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 39234940 - 39235015
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||||||||||||| |||||| ||||||||  |||||||||  || |||||||||||| |||||| |||||    
T  39234940 ttagtgagggaaatttagagaaggaaaacgtgaaatc--tctctaattttgttactaaattttgcgaccaaaaaattt 39235015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 19680555 - 19680494
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||| | ||||||||| || |||||  |||||||||||||||||||||||||| ||||    
T  19680555 ggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgacca 19680494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 22168266 - 22168343
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  ||||||   |||||||||||| ||||||||||||| ||||| ||||||    
T  22168266 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaattt 22168343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 30568138 - 30568061
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||| | ||||||||| || |||||  ||||||||||||||| |||||||| | |||| |||||||    
T  30568138 ttagtgaaggaaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaattt 30568061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 4586887 - 4586835
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    |||||||| ||||||||| || |||||  ||||||||||||||||||||||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttt 4586835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 14944758 - 14944814
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  14944758 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 14944814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 275
Target Start/End: Original strand, 34557191 - 34557275
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||| ||||||||| || |||||  ||| ||||||||||| |||||||||  ||||| |||||| | || |||||||||||    
T  34557191 aaatttagcgagggaaaaggtaaaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttatttt 34557275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 9239406 - 9239343
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| ||||||||  ||||||||||||||| | |||||||| ||||| ||||||    
T  9239406 ttagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaattt 9239343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 9670604 - 9670541
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || ||||   |||||||||||||||||||||||||| ||||| ||||||    
T  9670604 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 9670541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 9059072 - 9059014
Alignment:
Q  200 gagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||  |||||||  ||||||||||||||| |||||||||| ||||| ||||||    
T  9059072 gagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaattt 9059014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 12071960 - 12072037
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| || ||||||  | |||||  |||||||||||||||||||||||||| | ||| ||||||    
T  12071960 ttagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaattt 12072037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 4627207 - 4627155
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    |||||||| ||||||||| || |||||  ||||||||| ||||||||||||||    
T  4627207 aaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaatttt 4627155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 12105995 - 12106074
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||| |||||||||  ||||| |  |||||||||||||||||||| ||||| |||||||||||| | | | ||||||||||    
T  12105995 ttagtgagggaaaacatgaaacccctctctaattccgtcactaaa-tttgcgaccaaagaatttatgagaaattttatttt 12106074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 9368 - 9291
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || ||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  9368 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaattt 9291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 3823131 - 3823208
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||||||||||    
T  3823131 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 3823208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 17104004 - 17103927
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||||||||||    
T  17104004 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 17103927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 17824755 - 17824678
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||||||||||    
T  17824755 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 17824678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 29345072 - 29345163
Alignment:
Q  184 gtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||| |||||||||||||||||||| ||||||||  || ||||||||||||||||||||||| || ||  ||||| | ||||||||||||||    
T  29345072 gtgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttatttt 29345163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 8555443 - 8555366
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  | |||||  |||||||||||||||||||||||||| ||||||||||||    
T  8555443 ttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaattt 8555366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 43431698 - 43431621
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  ||||||||| |||||||||||||||||||||| ||||||    
T  43431698 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaattt 43431621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 26399132 - 26399052
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||| ||||||||| ||||||||  |||||||||||||||||||||||||| ||||| |||||| | | ||||||||||||    
T  26399132 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttatttt 26399052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 15251608 - 15251671
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaa 252  Q
    ||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||    
T  15251608 ggaaatttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaa 15251671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 6816522 - 6816428
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||| ||||||||||||||||||| |||||| | | | ||||||||||    
T  6816522 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttatttt 6816428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 21350476 - 21350553
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||| |||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  21350476 ttagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaattt 21350553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 24576163 - 24576086
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  24576163 ttagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaattt 24576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 27869248 - 27869313
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||||||||||    
T  27869248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaattt 27869313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 33652565 - 33652642
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  ||||||| |||||||| |||||||||||||||||| ||||| ||||||    
T  33652565 ttagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaattt 33652642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 5670298 - 5670231
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 5670231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 6817052 - 6817115
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttg 244  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||    
T  6817052 ttagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttg 6817115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 11938753 - 11938820
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 11938820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 32247921 - 32247984
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| ||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  32247921 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaattt 32247984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 37992097 - 37992172
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaat 256  Q
    ||||||| | |||||||| |||||||||  |||||||  |||||||||||||||||||||||||| || |||||||    
T  37992097 ttagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaat 37992172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 4330976 - 4331045
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| |||||||   |||||||||||||||||||||||||| ||||    
T  4330976 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgacca 4331045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 19240865 - 19240942
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||| | ||||||||| || ||||   |||||||||||||||||||||||||| ||||| ||||||    
T  19240865 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 19240942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 19314049 - 19314126
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||| | ||||||||| || ||||   |||||||||||||||||||||||||| ||||| ||||||    
T  19314049 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 19314126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 40289559 - 40289483
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  || ||||||||||||||||||||||| ||||| ||||||    
T  40289559 ttagtgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaattt 40289483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 4647894 - 4647830
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||||||  ||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||||    
T  4647894 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgc 4647830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 19256220 - 19256280
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 19256280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 31344311 - 31344247
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||| ||||||||||||||| |||||||   ||||||||||||||| ||||||||||    
T  31344311 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgc 31344247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 23752411 - 23752348
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  23752411 ttagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaattt 23752348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 25273452 - 25273389
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  |||||||||| ||||||||||||||| ||||||||||||    
T  25273452 ttagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaattt 25273389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 30687944 - 30688011
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| || |||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  30687944 aaatttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 30688011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 31399633 - 31399578
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||| ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  31399633 ttagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgacca 31399578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 17810296 - 17810366
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| ||| |||||| |||||||||  |||||||  ||||||||| |||||||||||||||| |||||    
T  17810296 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaa 17810366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 19493755 - 19493717
Alignment:
Q  220 tctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  19493755 tctctaattccgtcactaaattttgcgaccaaagaattt 19493717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 24636660 - 24636714
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||||||| ||||||||| || |||||  ||||||||||||||||||||||||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgc 24636714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 32961657 - 32961727
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| |||||||||| ||||||||| || ||||   |||||||||||||||||||| ||||| |||||    
T  32961657 ttagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaa 32961727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 15289679 - 15289736
Alignment:
Q  220 tctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttattttct 277  Q
    ||||||||||| |||||||||||| | |||||||||||| | | ||||||||||||||    
T  15289679 tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttct 15289736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 15470048 - 15470105
Alignment:
Q  220 tctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttattttct 277  Q
    ||||||||||| |||||||||||| | |||||||||||| | | ||||||||||||||    
T  15470048 tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttct 15470105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 16062078 - 16062001
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||||||||   |||| |||| ||||||||  |||||||||||||||||| ||||||| |||| |||||||    
T  16062078 ttagtgagggaaattttttgaggaaaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaattt 16062001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 18010199 - 18010122
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||  |||||||||  |||||||  |||||||||||||||||||||||||| | ||| ||||||    
T  18010199 ttagtgagggatatttattgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaattt 18010122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 22939323 - 22939388
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||| |||||||||  |||||||  |||||||||||||||||||||||||| || || ||||||    
T  22939323 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaattt 22939388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 24193335 - 24193266
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||  ||||||| | |||||||||  |||||||  |||||||||||||||||||||||||| ||||    
T  24193335 ttagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacca 24193266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 29350921 - 29350990
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| ||| |||||| |||||||||  |||||||  ||||||||| |||||||||||||||| ||||    
T  29350921 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgacca 29350990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 9915179 - 9915115
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||| | |||||||||||||||    
T  9915179 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgc 9915115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 30467083 - 30467023
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||||| ||||||||| || |||||  ||||||||||| |||||||||||||| |||||    
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaa 30467023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 19488186 - 19488123
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| |||||||||  ||||||   |||||||||||||||||||||||||| ||||| ||||||    
T  19488186 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 19488123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 27910903 - 27910840
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttg 244  Q
    ||||||| ||| |||||  |||||||||  |||||||  |||||||||||||||||||||||||    
T  27910903 ttagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttg 27910840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 27957322 - 27957259
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttg 244  Q
    ||||||| ||| |||||  |||||||||  |||||||  |||||||||||||||||||||||||    
T  27957322 ttagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttg 27957259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 29473431 - 29473376
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttg 244  Q
    |||||| |||| |||||||| |||||||| |||||| ||||||| |||||||||||    
T  29473431 ggaaatatagaaagggaaaacgtgaaatccttctctgattccgttactaaattttg 29473376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 3692310 - 3692248
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| ||||||||| ||||| |||| || ||||| |||||||||||| | ||||||||||    
T  3692310 ttagtgagggaaatttatagaggtaaaacgtaaaatccttctctaattccattactaaatttt 3692248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 5879202 - 5879264
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||||| |||| |||| || ||||   ||||||||||||||||||||||||    
T  5879202 ttagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaatttt 5879264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 8789877 - 8789915
Alignment:
Q  220 tctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  8789877 tctctaattccgtcactaaattttgcgaccaaggaattt 8789915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 33413095 - 33413045
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||| ||||||||| || |||||  ||||||||||||||||||||||||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgc 33413045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 6084373 - 6084321
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    |||||||||||  ||||| || |||||  ||||||||||||||||||||||||    
T  6084373 aaatttagagactgaaaatgtcaaatctctctctaattccgtcactaaatttt 6084321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 21219350 - 21219302
Alignment:
Q  210 gtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||||  ||||||||||| |||||||||||||| |||||| |||||    
T  21219350 gtgaaatccctctctaattccatcactaaattttgcgaccaaaaaattt 21219302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 37802517 - 37802441
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaatt 257  Q
    ||||||| |||||||||||||||||||| || |||||  |||||||||||||||||||||||||| |||||| ||||    
T  37802517 ttagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaaaaaatt 37802441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 2556091 - 2556161
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| |||| ||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  2556091 ttagtgagggaattttagagagggaaaatgtgaaatttttctctaattccgtcactaaattttacaaccaa 2556161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 29998698 - 29998604
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||   |||  ||||||| | ||||||||||||    
T  29998698 ttagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcgttcaataaatttttcagagattttatttt 29998604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 30783334 - 30783411
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  30783334 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaattt 30783411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 31266350 - 31266427
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  31266350 ttagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 31266427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 23858086 - 23858019
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || ||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaattt 23858019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 26687830 - 26687736
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||  ||||||||| || ||||||  |||||||  |||||||||||||||||||||||||||||||| |||||| | | | ||||||||||    
T  26687830 ttagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttt 26687736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 13613224 - 13613155
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||||||||||    
T  13613224 ggaagtttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 13613155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 23388517 - 23388448
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  23388517 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 23388448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 27523007 - 27523084
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  27523007 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 27523084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 32008948 - 32009025
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||  ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  32008948 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 32009025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 32300447 - 32300516
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  32300447 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 32300516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 37724131 - 37724054
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||  ||||||||| ||||||||| ||||||||  || ||||| ||||||||||||||||| ||||||||||||    
T  37724131 ttagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaattt 37724054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 41637614 - 41637691
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  41637614 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 41637691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 28262360 - 28262423
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttg 244  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||    
T  28262360 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttg 28262423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 37552233 - 37552300
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || |||||  ||||||||||||||| |||||||||| ||||||||||||    
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaattt 37552300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 8430292 - 8430354
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||    
T  8430292 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 8430354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 21293850 - 21293788
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||    
T  21293850 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaatttt 21293788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 32185828 - 32185890
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaatttt 243  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||||||||||||||||||    
T  32185828 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 32185890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 40018798 - 40018892
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||||| |||||||| |||||||||  |||||||  ||||||||||  ||||| |||||||||||||| |||||| | | | ||||||||||    
T  40018798 ttagtgacgaaaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttatttt 40018892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 1141532 - 1141601
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||| ||||||||||||||| ||||    
T  1141532 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgacca 1141601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 13788194 - 13788117
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||||| ||||||||| || |||||  ||||||||| |||||||||||||||| ||||| ||||||    
T  13788194 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaattt 13788117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 15636874 - 15636805
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||||||||| ||||||||  ||||||||| |||||||||||||||| ||||    
T  15636874 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgacca 15636805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 28319710 - 28319649
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  28319710 ggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 28319649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 28841481 - 28841404
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| | |||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  28841481 ttagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 28841404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 35697490 - 35697545
Alignment:
Q  220 tctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||||||||||||||||||||| |||||| ||||| | | ||||||||||||    
T  35697490 tctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttatttt 35697545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 14757248 - 14757190
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||| |||||||||  |||||||  |||||||||||||||||||||||||| |||||    
T  14757248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaa 14757190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 18916539 - 18916445
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    |||||||  ||||||||| |||||||||  |||||||  |||||||||| ||||||||||||||| | |||| ||||| | |  |||||||||||    
T  18916539 ttagtgagagaaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggattttatttt 18916445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 29749542 - 29749472
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| | |||||||| |||||||||  |||||||  || ||||||||||||||||||||||| |||||    
T  29749542 ttagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaa 29749472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 9004447 - 9004370
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || ||||   ||||||||||| ||||||||||||| ||| || ||||||    
T  9004447 ttagtgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaattt 9004370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 20065213 - 20065144
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | |||| |||| ||||||||  |||||||||| ||||||||||||||| ||||    
T  20065213 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgacca 20065144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 22140503 - 22140434
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | ||  ||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  22140503 ttagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 22140434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 41736168 - 41736245
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||||| ||||||||| || |||||  ||||||||| |||||||||||||||| | ||| ||||||    
T  41736168 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaattt 41736245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 18551392 - 18551328
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| ||| |||||| |||||||||  | |||||  ||||||||||||||||||||||||||    
T  18551392 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgc 18551328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 27327620 - 27327676
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||||||||| |||||||||  |||||||  ||| ||||||||||||||||||||||    
T  27327620 ggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgc 27327676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 43408636 - 43408580
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  43408636 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 43408580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 12779606 - 12779673
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || ||||   ||||||||| |||||||||||||||| ||||| ||||||    
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaattt 12779673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 44476492 - 44476437
Alignment:
Q  203 ggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  44476492 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaattt 44476437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 44722930 - 44723005
Alignment:
Q  183 agtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||| ||| |||||| ||| |||||  |||||||  |||||||||||||||||||||||||| || || ||||||    
T  44722930 agtgagggatatttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgactaaggaattt 44723005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 9590466 - 9590560
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttttaaagattttatttt 275  Q
    ||||||| |||||||||| |||  |||| ||||||||| |||||||||  || |||||||||||| |  ||  ||||||| |||||||| |||||    
T  9590466 ttagtgagggaaatttagcgagcaaaaacgtgaaatcgctctctaattttgttactaaattttgcgatgaagtaatttttaaaagatttcatttt 9590560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 26483 - 26560
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||||||||||    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 26560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 121124 - 121056
Alignment:
Q  183 agtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||| |||| ||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||    
T  121124 agtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaa 121056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 84799 - 84736
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||| || |||||  ||||||||||| |||||||||||||| ||||| ||||||    
T  84799 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaattt 84736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 58582 - 58661
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttt 260  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||| |||||  |||||||    
T  58582 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaattttt 58661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 173444 - 173523
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattttt 260  Q
    ||||||| ||| |||||| |||||||||  | |||||  |||||||||||||||||||||||||| ||||||||||||||    
T  173444 ttagtgatggatatttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaattttt 173523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 7505 - 7575
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  7505 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 7575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 74680 - 74610
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||||| |||||    
T  74680 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 74610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 190258 - 190350
Alignment:
Q  61 cccagacaaaacatcttattcatcattaaccataacctaacttagattatcttaacttccacctaattcaacattg---ctaccaccactttg 150  Q
    |||||| |||||||||||||||||||||||| ||| |||||||  ||||| ||||  ||||| |||||||||||||   ||||||||||||||    
T  190258 cccagataaaacatcttattcatcattaaccgtaatctaacttgaattattttaaactccacataattcaacattgcctctaccaccactttg 190350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 3750 - 3819
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||||| ||||||||| || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  3750 ggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 202774 - 202851
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||||| ||||||||| || ||||   |||||||||||||||||||||||||| ||||| ||||||    
T  202774 ttagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 202851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 276273 - 276209
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    ||||||| |||||||| | ||| ||||| ||||||||  ||||||||||||||||||||||||||    
T  276273 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgc 276209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 1058 - 981
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  1058 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 6118 - 6041
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||| ||||||||| || |||||  ||||||||||| |||||||||||||| ||||| ||||||    
T  6118 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaattt 6041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 19603 - 19680
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  19603 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 19680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 39842 - 39773
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| ||||||||   ||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  39842 ttagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaacca 39773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 8249 - 8172
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  8249 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 8172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 21981 - 21904
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| |||||||||  |||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  21981 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 21904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 84303 - 84366
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttg 244  Q
    ||||||| |||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||    
T  84303 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttg 84366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 12653 - 12729
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||| | ||||||||| ||||| ||  |||||||||||||||||||||||||| |||| |||||||    
T  12653 ttagtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaattt 12729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 37926 - 37857
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaacca 250  Q
    ||||||| |||||||| | |||||||||  |||||||  |||||||||||||||||||||||||| ||||    
T  37926 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgacca 37857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 10158 - 10235
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| |||||||||  |||||||||  |||||||  |||||||||||||||||||||||||| |  |||||||||    
T  10158 ttagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaattt 10235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 43917 - 43994
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| | |||||||| ||||||||| || ||||  |||||||||||||| | |||||||||| ||||||||||||    
T  43917 ttagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaattt 43994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 15119 - 15059
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| |||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 15059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 22221 - 22288
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || |||||  |||||||||||||||||||||||||| || || ||||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaattt 22288  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 112328 - 112398
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaa 251  Q
    ||||||| | ||||| ||||||| |||| || |||||  ||||||||||||||| ||||||||||||||||    
T  112328 ttagtgaggaaaattcagagaggaaaaacgttaaatccctctctaattccgtcattaaattttgcaaccaa 112398  T

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Target: scaffold0161 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 6803 - 6862
Alignment:
Q  189 ggaaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaac 248  Q
    |||||||||| |||||||||  ||||||   ||||||||||||||| |||||||||||||    
T  6803 ggaaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaac 6862  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 10792 - 10725
Alignment:
Q  191 aaatttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||||||| ||||||||| || ||||   |||||||||||||||||||||||||| || || ||||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaattt 10725  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 182544 - 182607
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    |||| ||||||||  || |||||  |||||||||||||||||||||||||| ||||| ||||||    
T  182544 ttagtgagggaaattgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 182607  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 219648 - 219700
Alignment:
Q  193 atttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||||| |||||||||  |||||||  ||||||||||||| ||||||||||||    
T  219648 atttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgc 219700  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 74857 - 74779
Alignment:
Q  181 ttagtgacggaaatttagagagggaaaaag-tgaaatcgttctctaattccgtcactaaattttgcaaccaaagaattt 258  Q
    ||||||| ||| |||||| ||||||||||  |||||||  |||||||||| ||||||||||||| | |||| |||||||    
T  74857 ttagtgaaggatatttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaattt 74779  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 439977 - 440027
Alignment:
Q  195 ttagagagggaaaaagtgaaatcgttctctaattccgtcactaaattttgc 245  Q
    |||| ||||||||| || |||||  ||||||||||||||||||||||||||    
T  439977 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgc 440027  T

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