View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6560_high_46 (Length: 218)
Name: NF6560_high_46
Description: NF6560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6560_high_46 |
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Alignment Details
Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 22326449 - 22326311
Alignment:
| Q |
61 |
atctgttgctgaatactatgcgaatctgcgactatatgatctatttatataacattctttagtgtttttattctatgtttttgtaaaactaaacactgtt |
160 |
Q |
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| T |
22326449 |
atctgttgctgaattctatgcgaatctgcgactatatgatctatttatataacattctttagtgtttttattcaatgtttttgtaaaactaaacactgtt |
22326350 |
T |
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| Q |
161 |
ttttgtatttctttagagaaagaactggaaagaaaaaca |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
22326349 |
ttttgtatttctttagagaaagaactggaaagaaaaaca |
22326311 |
T |
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