View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6560_low_14 (Length: 430)

Name: NF6560_low_14
Description: NF6560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6560_low_14
NF6560_low_14
[»] chr2 (8 HSPs)
chr2 (266-420)||(19138361-19138515)
chr2 (190-268)||(17164592-17164670)
chr2 (99-189)||(19138273-19138360)
chr2 (190-268)||(36250577-36250655)
chr2 (190-242)||(19877507-19877559)
chr2 (190-268)||(32212942-32213020)
chr2 (190-270)||(24168198-24168278)
chr2 (1-29)||(19138175-19138203)
[»] chr3 (8 HSPs)
chr3 (190-268)||(24700097-24700175)
chr3 (190-268)||(8485965-8486043)
chr3 (192-268)||(27237964-27238040)
chr3 (207-268)||(54737170-54737231)
chr3 (190-268)||(47425146-47425224)
chr3 (190-241)||(32834615-32834666)
chr3 (190-234)||(25574666-25574710)
chr3 (190-242)||(46225068-46225120)
[»] chr5 (4 HSPs)
chr5 (190-262)||(17042198-17042270)
chr5 (191-270)||(7933407-7933486)
chr5 (191-270)||(34702904-34702982)
chr5 (330-378)||(34693346-34693394)
[»] chr8 (3 HSPs)
chr8 (189-268)||(19177952-19178030)
chr8 (190-270)||(28239295-28239375)
chr8 (199-268)||(12814983-12815053)
[»] chr4 (6 HSPs)
chr4 (190-268)||(5155502-5155580)
chr4 (190-270)||(17722293-17722373)
chr4 (190-268)||(51746198-51746276)
chr4 (190-268)||(2594448-2594526)
chr4 (190-267)||(17641348-17641425)
chr4 (190-258)||(1979391-1979459)
[»] scaffold0234 (1 HSPs)
scaffold0234 (190-268)||(6945-7023)
[»] chr6 (4 HSPs)
chr6 (197-262)||(16548292-16548357)
chr6 (191-268)||(16730436-16730513)
chr6 (190-268)||(21224552-21224629)
chr6 (190-258)||(27966300-27966368)
[»] chr7 (5 HSPs)
chr7 (190-268)||(8981547-8981625)
chr7 (188-268)||(7705932-7706012)
chr7 (190-268)||(31715307-31715385)
chr7 (190-270)||(26263058-26263138)
chr7 (190-270)||(32913690-32913770)
[»] chr1 (2 HSPs)
chr1 (190-270)||(21112740-21112819)
chr1 (190-270)||(21117482-21117562)


Alignment Details
Target: chr2 (Bit Score: 139; Significance: 1e-72; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 266 - 420
Target Start/End: Original strand, 19138361 - 19138515
Alignment:
Q  266 tgatgaggttctaagcttcaccagaaaatctgcacactagttcccttctattagaatatgagtaatagagacattggtttgagagatgaggtctttaatg 365  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19138361 tgatgaggttctaagcttcatcagaaaatctgcacgctagttcccttctattagaatatgagtaatagagacaatggtttgagagatgaggtctttaatg 19138460  T
Q  366 tcttggattaaaactacatacacctgacaattcacaagggggccattgatgatgt 420  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19138461 tcttggattaaaactacatacatctgacaattcacaagggggccattgatgatgt 19138515  T

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Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 17164592 - 17164670
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17164592 cactactacataaatgacatttcacatcggttgaaatcgacatttcacatcgggtggcaaccgatgtaactaaaggtga 17164670  T

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Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 19138273 - 19138360
Alignment:
Q  99 tactccatatggaaataagttcccgatacatcatcattccttagcagattgaggattctgaatgttacccatgaattagcaaactagaatc 189  Q
    ||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  19138273 tactccatatggaaataagttcccgatacatcat---tcctcagcagattgaggattctgaagattacccatgaattagcaaactagaatc 19138360  T

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Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 36250655 - 36250577
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| |||||    
T  36250655 cactactacagaaatgacatttcacatcggttgaaatcgacatttcacatcgggtaccaaccgatgtaactaagggtga 36250577  T

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Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 19877559 - 19877507
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcgg 242  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  19877559 cactactacaaaaatgacatttcacatcggttgaaatcgacatttcacatcgg 19877507  T

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Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 32212942 - 32213020
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| ||||||||||||||||||||| || ||| ||||| ||| ||||||| |  ||||||||||||||||||||||    
T  32212942 cactactacagaaatgacatttcacatcagtggaattcgactttttacatcgggtcccaaccgatgtaactaaaggtga 32213020  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 24168278 - 24168198
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 270  Q
    |||||| | ||||||||||||||||||| || |||||| || ||||||||||| |  || | |||||||| ||||||||||    
T  24168278 cactactatagaaatgacatttcacatcagtggaaatcaacttttcacatcgggtcccaccagatgtaacgaaaggtgatg 24168198  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 19138175 - 19138203
Alignment:
Q  1 acacttattcgaatactaaattatatcaa 29  Q
    |||||||||||||||||||||||||||||    
T  19138175 acacttattcgaatactaaattatatcaa 19138203  T

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Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 24700097 - 24700175
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  24700097 cactactacagaaatgacatttcacatcggttgaaatcgacatttcacatcggtttccaaccgatgtaactaaaggtga 24700175  T

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Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 8485965 - 8486043
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| |||||    
T  8485965 cactactacaaaaatgacatttcacatcggttgaaatcgacatttcacatcgggtaccaaccgatgtaactaagggtga 8486043  T

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Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 268
Target Start/End: Complemental strand, 27238040 - 27237964
Alignment:
Q  192 ctacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||| ||||||||||||| | |||||||||||||||||| ||| ||||| | ||||||||||||||||||| |||||    
T  27238040 ctactacagaaatgacatcttacatcggttgaaatcgacttttaacatcaggtggcaaccgatgtaactaagggtga 27237964  T

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Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 54737170 - 54737231
Alignment:
Q  207 catttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    ||||| |||||||||||||||||||||||||||||| |  |||||||||||||||| |||||    
T  54737170 cattttacatcggttgaaatcgacatttcacatcgggtaccaaccgatgtaactaagggtga 54737231  T

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Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 47425224 - 47425146
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| ||||||||||||||||||||| || |||||| || ||||||||||| |  || ||||||| |||||||||||    
T  47425224 cactactacagaaatgacatttcacatcagtggaaatcaacttttcacatcgggtcccagccgatgtgactaaaggtga 47425146  T

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Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 32834615 - 32834666
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcg 241  Q
    |||||| ||||||||||||||||||||||||  |||||||| ||||||||||    
T  32834615 cactactacagaaatgacatttcacatcggtcaaaatcgacttttcacatcg 32834666  T

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Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 25574710 - 25574666
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacattt 234  Q
    |||||| ||||||||||||||||||||| || |||||||||||||    
T  25574710 cactactacagaaatgacatttcacatcagtggaaatcgacattt 25574666  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 46225068 - 46225120
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcgg 242  Q
    |||||| ||| ||||||||||||| |||| | ||||| |||||||||||||||    
T  46225068 cactactacataaatgacatttcatatcgatggaaattgacatttcacatcgg 46225120  T

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Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 262
Target Start/End: Original strand, 17042198 - 17042270
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaa 262  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  17042198 cactactacagaaatgacatttcacatcggttgaaatcgacatttcacatcgggtgccaaccgatgtaactaa 17042270  T

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Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 7933407 - 7933486
Alignment:
Q  191 actacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 270  Q
    ||||| |||||||||||||||||||||||||| |||||| |||||||||||| |   ||||||||| ||||||| |||||    
T  7933407 actactacagaaatgacatttcacatcggttggaatcgatatttcacatcgggtcctaaccgatgtcactaaagatgatg 7933486  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 34702982 - 34702904
Alignment:
Q  191 actacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 270  Q
    ||||||||||||||||||||||||||| | | | || ||| ||||||||||| |  || |||||||||||||||| ||||    
T  34702982 actacaacagaaatgacatttcacatctg-taatattgacttttcacatcggttcccagccgatgtaactaaaggcgatg 34702904  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 34693394 - 34693346
Alignment:
Q  330 atagagacattggtttgagagatgaggtctttaatgtcttggattaaaa 378  Q
    |||||||||||  |||||||||||||||||||||| | ||||| |||||    
T  34693394 atagagacattattttgagagatgaggtctttaatattttggactaaaa 34693346  T

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Target: chr8 (Bit Score: 56; Significance: 5e-23; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 19177952 - 19178030
Alignment:
Q  189 ccactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||    
T  19177952 ccactactacagaaatgacatttcacatcggttgaaatcgacatttcacatcgg-taccaaccgatgtaattaaaggtga 19178030  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 28239295 - 28239375
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 270  Q
    |||||| ||| ||||||||||||||||| || ||||| ||||||||||||||| |  |||||||||| |||||||||||||    
T  28239295 cactactacataaatgacatttcacatcagtggaaattgacatttcacatcgggtcccaaccgatgtcactaaaggtgatg 28239375  T

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Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 12814983 - 12815053
Alignment:
Q  199 agaaatgacatttcacatcggttgaaatcgacattt-cacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||||| ||||||||||  ||||||||||| ||| |||||||| || || |||||||||||||||||||    
T  12814983 agaaatgagatttcacatcacttgaaatcgactttttcacatcgggtgacacccgatgtaactaaaggtga 12815053  T

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Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 5155502 - 5155580
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| ||||||||||||||||||||| || ||||||||||||||||||||| |  ||||||||||||||||||||||    
T  5155502 cactactacagaaatgacatttcacatcagtggaaatcgacatttcacatcgggtcccaaccgatgtaactaaaggtga 5155580  T

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Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 17722293 - 17722373
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 270  Q
    |||||| ||||||||||||||||||||||||||||||| || ||| ||||||| || ||||||||||| ||||||||||||    
T  17722293 cactactacagaaatgacatttcacatcggttgaaatcaacttttaacatcgggtgccaaccgatgtacctaaaggtgatg 17722373  T

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Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 51746276 - 51746198
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| |||||||||||||||||||||||| |||| |||| ||||||||||| |  | ||||||||||||||||||||    
T  51746276 cactactacagaaatgacatttcacatcggtggaaaacgacttttcacatcgggtccctaccgatgtaactaaaggtga 51746198  T

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Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 2594448 - 2594526
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| ||||||||||||||||||||| || ||| ||||| ||| ||||||| |  ||||||||||||||||||||||    
T  2594448 cactactacagaaatgacatttcacatcagtggaattcgactttttacatcgggtcccaaccgatgtaactaaaggtga 2594526  T

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Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 17641348 - 17641425
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtg 267  Q
    |||||| ||| ||||||||| |||||||||||| ||| ||||||||||||||| |   ||||||||| ||||||||||    
T  17641348 cactactacataaatgacatctcacatcggttggaattgacatttcacatcgggtcctaaccgatgtcactaaaggtg 17641425  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 1979391 - 1979459
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaa 258  Q
    ||||||| |||||||||  ||||||||| |||||||  ||  ||||||||||| || ||||||||||||    
T  1979391 cactacagcagaaatgatttttcacatcagttgaaaatgatttttcacatcggttgacaaccgatgtaa 1979459  T

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Target: scaffold0234 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 7023 - 6945
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||||||||| |  |||||||||||||||| |||||    
T  7023 cactactacagaaatgacatttcacatcgattgaaattgacatttcacatcgggtaccaaccgatgtaactaagggtga 6945  T

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Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 16548292 - 16548357
Alignment:
Q  197 acagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaa 262  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| |  ||||||||||||||||    
T  16548292 acagaaatgacatttcacattagttgaaatcgacatttcacatcgggtaccaaccgatgtaactaa 16548357  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 16730513 - 16730436
Alignment:
Q  191 actacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    ||||| ||||||||||||||| ||||| || ||||||||| |||||||| || |  || |||||||||||||||||||    
T  16730513 actactacagaaatgacatttaacatcagtggaaatcgacttttcacattgggtcccagccgatgtaactaaaggtga 16730436  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 21224552 - 21224629
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| ||||||||||||||| ||||| || ||||||||| ||||||||||| |  || ||||||| |||||||||||    
T  21224552 cactactacagaaatgacatttaacatcagtggaaatcgacttttcacatcgggtcccacccgatgt-actaaaggtga 21224629  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 27966368 - 27966300
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaa 258  Q
    |||||| |||||||| |  ||||||||| ||||||| | || ||||||||| | |||||||||||||||    
T  27966368 cactactacagaaataagttttcacatcagttgaaaactacttttcacatcaggtggcaaccgatgtaa 27966300  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 8981547 - 8981625
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| |||||||||||||| ||||||||||| ||||||| ||||||||||| |  |||| |||||| ||||||||||    
T  8981547 cactactacagaaatgacattccacatcggttggaatcgacttttcacatcgggtcccaacggatgtagctaaaggtga 8981625  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 7705932 - 7706012
Alignment:
Q  188 tccactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||||| |||||||| |||||||||||| || ||||| ||||||||||||||| |  || ||||||| |||||||||||    
T  7705932 tccactactacagaaatcacatttcacatcagtggaaattgacatttcacatcgggtcccagccgatgtgactaaaggtga 7706012  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 31715385 - 31715307
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtga 268  Q
    |||||| ||| ||||||||||||||||| ||  || ||||| ||||||||||| |  ||||||||||||||||||||||    
T  31715385 cactactacaaaaatgacatttcacatcagtgaaattcgacttttcacatcggatcccaaccgatgtaactaaaggtga 31715307  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 26263058 - 26263138
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 270  Q
    |||||| ||| |||||| |||||||||| || ||||||||| |||||||| || |  || |||||||||||||||||||||    
T  26263058 cactactacataaatgaaatttcacatcagtggaaatcgacttttcacattgggtcccacccgatgtaactaaaggtgatg 26263138  T

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Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 32913690 - 32913770
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 270  Q
    |||||| ||||||||||||||||||||  || ||| ||||| ||||| ||||| |  || |||||||||||||||||||||    
T  32913690 cactactacagaaatgacatttcacattagtggaattcgacttttcaaatcggatcccacccgatgtaactaaaggtgatg 32913770  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 21112740 - 21112819
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 270  Q
    |||||| ||||||||||||||| ||||| || |||||| || ||||||||||| |  || ||||||| |||||||||||||    
T  21112740 cactactacagaaatgacatttaacatcagtggaaatcaacttttcacatcgg-tcccacccgatgtcactaaaggtgatg 21112819  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 21117482 - 21117562
Alignment:
Q  190 cactacaacagaaatgacatttcacatcggttgaaatcgacatttcacatcggctggcaaccgatgtaactaaaggtgatg 270  Q
    |||||| |||||||||| |||| ||||| || |||||| || ||||||||||| |  || ||||||| |||||||||||||    
T  21117482 cactactacagaaatgatatttaacatcagtggaaatcaacttttcacatcgggtcccacccgatgtcactaaaggtgatg 21117562  T

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