View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6560_low_2 (Length: 607)
Name: NF6560_low_2
Description: NF6560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6560_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 31575414 - 31575349
Alignment:
| Q |
14 |
ttctcgataaagaagccgtgagtaataagatgttattatcaatgatttatttttgtgtgcagtgatg |
80 |
Q |
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| T |
31575414 |
ttctcgataaagaagccgtgactaataagat-ttattatcaatgatttatttttgtgtgcagtgatg |
31575349 |
T |
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