View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6563_high_18 (Length: 465)

Name: NF6563_high_18
Description: NF6563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6563_high_18
NF6563_high_18
[»] chr3 (47 HSPs)
chr3 (200-447)||(51826789-51827036)
chr3 (200-447)||(48648724-48648971)
chr3 (4-108)||(52520765-52520869)
chr3 (4-111)||(43786955-43787062)
chr3 (4-110)||(39074503-39074608)
chr3 (4-106)||(6842703-6842805)
chr3 (4-106)||(10617284-10617386)
chr3 (4-112)||(49893415-49893523)
chr3 (4-106)||(272304-272406)
chr3 (4-109)||(4168267-4168372)
chr3 (378-447)||(11651976-11652045)
chr3 (4-108)||(48725355-48725459)
chr3 (4-107)||(858673-858776)
chr3 (4-106)||(46352718-46352820)
chr3 (4-109)||(53489821-53489926)
chr3 (4-108)||(40362578-40362682)
chr3 (4-94)||(2505433-2505523)
chr3 (4-106)||(41553940-41554042)
chr3 (4-105)||(49529269-49529368)
chr3 (6-107)||(2938039-2938140)
chr3 (4-101)||(41304087-41304184)
chr3 (2-106)||(7468493-7468595)
chr3 (4-107)||(11308210-11308312)
chr3 (2-105)||(33140967-33141070)
chr3 (4-107)||(43269738-43269841)
chr3 (4-109)||(18014756-18014861)
chr3 (2-99)||(28139391-28139488)
chr3 (4-109)||(42964246-42964351)
chr3 (4-103)||(20924076-20924173)
chr3 (4-80)||(42548179-42548255)
chr3 (4-109)||(41993617-41993721)
chr3 (4-100)||(22248970-22249066)
chr3 (4-105)||(24488450-24488551)
chr3 (4-115)||(50359177-50359288)
chr3 (308-350)||(11651919-11651961)
chr3 (4-82)||(38852301-38852379)
chr3 (4-78)||(50298973-50299047)
chr3 (4-106)||(52552558-52552658)
chr3 (4-73)||(29241721-29241790)
chr3 (4-109)||(50395560-50395664)
chr3 (2-106)||(52246664-52246768)
chr3 (4-78)||(13159981-13160055)
chr3 (4-68)||(2119515-2119577)
chr3 (57-111)||(2362949-2363003)
chr3 (65-107)||(53163911-53163953)
chr3 (220-248)||(11651880-11651908)
chr3 (260-292)||(51827031-51827063)
[»] chr4 (58 HSPs)
chr4 (200-447)||(24158371-24158618)
chr4 (4-111)||(16536132-16536239)
chr4 (7-116)||(29591276-29591385)
chr4 (4-113)||(36395183-36395292)
chr4 (4-111)||(4089226-4089333)
chr4 (4-106)||(4268822-4268924)
chr4 (2-107)||(33108672-33108777)
chr4 (4-116)||(7769022-7769134)
chr4 (4-108)||(43202382-43202485)
chr4 (4-106)||(43944591-43944692)
chr4 (1-106)||(12356325-12356430)
chr4 (372-447)||(5590338-5590413)
chr4 (4-107)||(16820936-16821039)
chr4 (372-447)||(48127957-48128032)
chr4 (4-106)||(789530-789632)
chr4 (7-109)||(50619173-50619274)
chr4 (4-108)||(18067877-18067981)
chr4 (2-106)||(54897390-54897494)
chr4 (4-106)||(15186327-15186423)
chr4 (4-104)||(19503107-19503207)
chr4 (4-106)||(6164177-6164279)
chr4 (4-108)||(32217129-32217232)
chr4 (4-107)||(30387133-30387236)
chr4 (4-106)||(5091612-5091712)
chr4 (4-108)||(3783496-3783603)
chr4 (4-106)||(39877247-39877351)
chr4 (4-109)||(55882767-55882871)
chr4 (4-109)||(37988019-37988124)
chr4 (4-73)||(39843991-39844060)
chr4 (38-117)||(31517284-31517362)
chr4 (4-111)||(32202476-32202582)
chr4 (4-109)||(50603311-50603417)
chr4 (57-111)||(54054666-54054720)
chr4 (4-109)||(4220279-4220383)
chr4 (57-118)||(46688212-46688273)
chr4 (4-97)||(47231881-47231974)
chr4 (3-75)||(52533816-52533888)
chr4 (4-79)||(46149023-46149098)
chr4 (4-106)||(54945780-54945880)
chr4 (2-75)||(31680494-31680567)
chr4 (4-97)||(53655887-53655980)
chr4 (4-104)||(54655879-54655978)
chr4 (4-82)||(30154187-30154265)
chr4 (4-111)||(42898739-42898848)
chr4 (4-108)||(53003954-53004058)
chr4 (4-47)||(46688264-46688307)
chr4 (4-78)||(24679671-24679744)
chr4 (34-107)||(28119905-28119978)
chr4 (34-107)||(37402758-37402830)
chr4 (310-350)||(5590425-5590465)
chr4 (310-350)||(48127905-48127945)
chr4 (4-51)||(8133791-8133838)
chr4 (34-97)||(28120058-28120121)
chr4 (69-106)||(10426066-10426103)
chr4 (4-105)||(28755704-28755803)
chr4 (34-110)||(292229-292305)
chr4 (69-97)||(25532963-25532991)
chr4 (4-47)||(42815193-42815237)
[»] chr6 (43 HSPs)
chr6 (218-447)||(33435843-33436072)
chr6 (4-109)||(392180-392285)
chr6 (4-109)||(32929505-32929610)
chr6 (4-117)||(4215779-4215892)
chr6 (4-117)||(3515850-3515963)
chr6 (4-107)||(32985192-32985295)
chr6 (5-109)||(23402223-23402327)
chr6 (4-109)||(26467121-26467226)
chr6 (4-108)||(27433576-27433680)
chr6 (4-107)||(2581036-2581139)
chr6 (4-106)||(18276612-18276717)
chr6 (4-106)||(12145117-12145219)
chr6 (4-109)||(25165410-25165515)
chr6 (2-102)||(3026013-3026113)
chr6 (4-100)||(7851165-7851261)
chr6 (4-107)||(12525803-12525906)
chr6 (4-93)||(5323484-5323573)
chr6 (2-106)||(1391178-1391282)
chr6 (4-100)||(2350736-2350832)
chr6 (6-106)||(35043975-35044074)
chr6 (4-109)||(1840244-1840349)
chr6 (4-112)||(28225304-28225412)
chr6 (2-106)||(31280403-31280501)
chr6 (10-109)||(29978322-29978420)
chr6 (4-109)||(13416957-13417064)
chr6 (4-82)||(29451139-29451217)
chr6 (34-107)||(34706835-34706908)
chr6 (2-62)||(9661068-9661128)
chr6 (4-107)||(21878352-21878449)
chr6 (4-82)||(11115121-11115197)
chr6 (4-75)||(961093-961164)
chr6 (57-107)||(34477568-34477618)
chr6 (4-106)||(34851849-34851951)
chr6 (30-87)||(22417303-22417360)
chr6 (69-100)||(3515772-3515803)
chr6 (69-100)||(7851308-7851339)
chr6 (69-100)||(20897954-20897985)
chr6 (6-73)||(28564322-28564388)
chr6 (34-100)||(34712131-34712197)
chr6 (69-107)||(8701343-8701381)
chr6 (107-141)||(33435744-33435778)
chr6 (57-106)||(20898066-20898114)
chr6 (260-292)||(33435810-33435842)
[»] chr7 (43 HSPs)
chr7 (200-444)||(31953596-31953840)
chr7 (4-106)||(24438561-24438663)
chr7 (4-109)||(34333368-34333472)
chr7 (4-106)||(24798403-24798505)
chr7 (4-112)||(13064870-13064979)
chr7 (4-106)||(4628650-4628752)
chr7 (4-106)||(29993487-29993589)
chr7 (5-107)||(34606346-34606448)
chr7 (4-107)||(42044293-42044395)
chr7 (4-106)||(5239369-5239471)
chr7 (4-82)||(45045854-45045932)
chr7 (378-447)||(31954530-31954599)
chr7 (4-107)||(18486045-18486148)
chr7 (4-109)||(18117227-18117331)
chr7 (4-82)||(47839576-47839654)
chr7 (4-109)||(12218434-12218538)
chr7 (4-109)||(30810739-30810844)
chr7 (4-84)||(7689222-7689302)
chr7 (4-101)||(28262110-28262207)
chr7 (2-79)||(43594063-43594140)
chr7 (2-106)||(525076-525179)
chr7 (4-104)||(28587993-28588093)
chr7 (4-107)||(23363166-23363269)
chr7 (4-109)||(37674103-37674206)
chr7 (4-101)||(1737064-1737160)
chr7 (4-81)||(33636536-33636613)
chr7 (2-105)||(23357711-23357814)
chr7 (4-107)||(47083139-47083241)
chr7 (4-74)||(8754617-8754687)
chr7 (4-81)||(47657064-47657139)
chr7 (4-105)||(5729430-5729531)
chr7 (4-120)||(46716722-46716839)
chr7 (4-105)||(11686324-11686426)
chr7 (34-108)||(38128406-38128480)
chr7 (310-350)||(31954614-31954654)
chr7 (4-51)||(47118044-47118091)
chr7 (4-44)||(27456175-27456215)
chr7 (34-109)||(19434608-19434682)
chr7 (4-74)||(29835735-29835806)
chr7 (69-108)||(36786057-36786096)
chr7 (107-141)||(31953899-31953933)
chr7 (64-107)||(34556891-34556932)
chr7 (4-44)||(37631604-37631644)
[»] chr8 (48 HSPs)
chr8 (4-107)||(168550-168653)
chr8 (4-107)||(27988499-27988601)
chr8 (4-107)||(28045801-28045903)
chr8 (4-111)||(30675568-30675674)
chr8 (4-106)||(34228766-34228868)
chr8 (4-106)||(16888544-16888646)
chr8 (4-109)||(4537741-4537846)
chr8 (4-107)||(2805259-2805362)
chr8 (4-106)||(11112723-11112825)
chr8 (4-106)||(16394061-16394163)
chr8 (4-104)||(16890482-16890582)
chr8 (2-106)||(20831553-20831657)
chr8 (4-111)||(13643096-13643202)
chr8 (4-111)||(13743521-13743627)
chr8 (4-106)||(7304518-7304620)
chr8 (4-108)||(4648278-4648382)
chr8 (4-108)||(29444138-29444242)
chr8 (4-79)||(21595930-21596005)
chr8 (5-107)||(9063051-9063153)
chr8 (4-97)||(12203938-12204031)
chr8 (4-97)||(12448366-12448459)
chr8 (4-104)||(39406926-39407024)
chr8 (2-106)||(43119299-43119402)
chr8 (4-87)||(33357148-33357231)
chr8 (6-103)||(28626854-28626950)
chr8 (4-108)||(36730528-36730631)
chr8 (4-108)||(42034979-42035083)
chr8 (4-106)||(9537824-9537926)
chr8 (4-106)||(24843280-24843381)
chr8 (4-108)||(3930231-3930335)
chr8 (14-110)||(9253899-9253994)
chr8 (4-111)||(32113992-32114100)
chr8 (4-109)||(22956789-22956895)
chr8 (2-106)||(40831359-40831463)
chr8 (4-87)||(16785170-16785253)
chr8 (4-63)||(10870436-10870495)
chr8 (4-75)||(37373289-37373360)
chr8 (4-106)||(29235319-29235421)
chr8 (64-115)||(42655268-42655318)
chr8 (38-111)||(2490152-2490225)
chr8 (4-100)||(42433550-42433645)
chr8 (34-110)||(43714184-43714260)
chr8 (57-108)||(10618135-10618186)
chr8 (69-108)||(45185052-45185091)
chr8 (64-106)||(9934557-9934599)
chr8 (64-100)||(13643018-13643054)
chr8 (64-100)||(13743443-13743479)
chr8 (64-108)||(18955840-18955884)
[»] chr5 (33 HSPs)
chr5 (4-107)||(34650832-34650935)
chr5 (4-122)||(8787423-8787541)
chr5 (4-112)||(11957961-11958069)
chr5 (329-447)||(16154682-16154798)
chr5 (4-106)||(10054353-10054454)
chr5 (4-109)||(35504238-35504342)
chr5 (4-100)||(6283646-6283742)
chr5 (4-108)||(35132606-35132709)
chr5 (4-107)||(13661892-13661995)
chr5 (378-447)||(41046059-41046128)
chr5 (4-107)||(11846156-11846259)
chr5 (4-82)||(12506380-12506458)
chr5 (4-108)||(40564402-40564506)
chr5 (4-106)||(21547394-21547496)
chr5 (2-106)||(40057389-40057493)
chr5 (4-109)||(10956035-10956140)
chr5 (378-423)||(31082169-31082214)
chr5 (4-73)||(9721640-9721709)
chr5 (2-51)||(13470233-13470282)
chr5 (4-108)||(4268646-4268749)
chr5 (4-100)||(20175311-20175406)
chr5 (57-106)||(19647677-19647726)
chr5 (310-350)||(22799154-22799194)
chr5 (311-350)||(31082229-31082268)
chr5 (34-106)||(31467834-31467906)
chr5 (4-68)||(39066973-39067037)
chr5 (69-108)||(8927554-8927593)
chr5 (57-108)||(10070086-10070137)
chr5 (372-407)||(22799107-22799142)
chr5 (34-100)||(14214055-14214121)
chr5 (2-47)||(19647717-19647762)
chr5 (48-100)||(10955957-10956009)
chr5 (220-248)||(31082282-31082310)
[»] chr2 (41 HSPs)
chr2 (4-109)||(4381879-4381984)
chr2 (4-111)||(20553015-20553122)
chr2 (308-439)||(23501833-23501959)
chr2 (4-117)||(27856385-27856498)
chr2 (4-111)||(31438730-31438837)
chr2 (2-107)||(22068319-22068424)
chr2 (1-106)||(32360869-32360974)
chr2 (4-106)||(30486294-30486396)
chr2 (4-106)||(6580273-6580372)
chr2 (4-108)||(34442531-34442634)
chr2 (4-107)||(26387063-26387166)
chr2 (4-106)||(31390096-31390198)
chr2 (4-106)||(44587986-44588088)
chr2 (4-109)||(3668110-3668215)
chr2 (2-108)||(28601048-28601154)
chr2 (4-108)||(8969405-8969509)
chr2 (4-106)||(22887834-22887936)
chr2 (4-109)||(561515-561620)
chr2 (4-109)||(22567686-22567791)
chr2 (4-100)||(1859246-1859342)
chr2 (4-107)||(35851749-35851853)
chr2 (4-105)||(4022480-4022581)
chr2 (4-105)||(13574031-13574131)
chr2 (4-108)||(5093538-5093641)
chr2 (4-108)||(32860186-32860289)
chr2 (4-108)||(25782831-25782935)
chr2 (4-76)||(38590904-38590976)
chr2 (4-114)||(2898155-2898265)
chr2 (4-105)||(27584822-27584922)
chr2 (4-69)||(11021259-11021324)
chr2 (4-100)||(43637248-43637343)
chr2 (4-51)||(38296261-38296308)
chr2 (4-78)||(25772195-25772269)
chr2 (2-76)||(29102313-29102387)
chr2 (4-73)||(5881305-5881374)
chr2 (57-106)||(26891683-26891731)
chr2 (34-106)||(45262024-45262096)
chr2 (4-47)||(26891722-26891765)
chr2 (69-111)||(19036960-19037002)
chr2 (69-106)||(32479404-32479441)
chr2 (38-106)||(31782565-31782633)
[»] chr1 (56 HSPs)
chr1 (4-109)||(18043246-18043351)
chr1 (2-109)||(29657853-29657960)
chr1 (4-105)||(38162934-38163035)
chr1 (4-109)||(42769987-42770092)
chr1 (4-109)||(51065745-51065850)
chr1 (4-111)||(5694405-5694512)
chr1 (4-110)||(15227823-15227929)
chr1 (4-106)||(24178463-24178565)
chr1 (4-107)||(12072061-12072164)
chr1 (4-106)||(30294381-30294483)
chr1 (4-108)||(47010077-47010181)
chr1 (4-108)||(38701935-38702035)
chr1 (372-447)||(50271099-50271174)
chr1 (4-108)||(14350277-14350379)
chr1 (4-112)||(45449238-45449346)
chr1 (4-106)||(48383111-48383213)
chr1 (4-110)||(3097743-3097846)
chr1 (4-107)||(19031814-19031917)
chr1 (4-106)||(41730392-41730494)
chr1 (7-81)||(51368810-51368884)
chr1 (4-109)||(43286806-43286913)
chr1 (4-107)||(3784712-3784815)
chr1 (4-114)||(17333276-17333384)
chr1 (4-106)||(9266728-9266830)
chr1 (4-105)||(13961295-13961396)
chr1 (4-109)||(50128169-50128274)
chr1 (4-80)||(12307001-12307077)
chr1 (4-79)||(36446352-36446427)
chr1 (2-112)||(23473458-23473568)
chr1 (4-109)||(8472911-8473016)
chr1 (2-79)||(29683278-29683355)
chr1 (4-108)||(45431362-45431466)
chr1 (4-116)||(6770421-6770529)
chr1 (15-106)||(19010687-19010778)
chr1 (57-107)||(29210531-29210581)
chr1 (4-106)||(30217846-30217946)
chr1 (4-82)||(35985645-35985723)
chr1 (4-116)||(30657692-30657798)
chr1 (4-100)||(52431665-52431761)
chr1 (4-80)||(48071566-48071642)
chr1 (2-49)||(14881036-14881083)
chr1 (4-47)||(29210497-29210540)
chr1 (57-107)||(21112680-21112730)
chr1 (34-106)||(28725905-28725977)
chr1 (4-68)||(38335253-38335317)
chr1 (14-106)||(47532671-47532763)
chr1 (57-107)||(21117422-21117472)
chr1 (34-100)||(30664173-30664239)
chr1 (310-350)||(50271200-50271240)
chr1 (42-109)||(26228300-26228367)
chr1 (64-106)||(23822523-23822565)
chr1 (70-112)||(34540289-34540331)
chr1 (34-107)||(10679629-10679702)
chr1 (31-108)||(11796969-11797045)
chr1 (66-106)||(38595752-38595792)
chr1 (220-248)||(50271253-50271281)
[»] scaffold0425 (1 HSPs)
scaffold0425 (4-106)||(10794-10896)
[»] scaffold0190 (1 HSPs)
scaffold0190 (7-112)||(14983-15088)
[»] scaffold0188 (1 HSPs)
scaffold0188 (4-109)||(6107-6212)
[»] scaffold0003 (1 HSPs)
scaffold0003 (4-108)||(53683-53787)
[»] scaffold0524 (1 HSPs)
scaffold0524 (4-109)||(909-1014)
[»] scaffold0264 (1 HSPs)
scaffold0264 (4-107)||(23045-23148)
[»] scaffold0014 (1 HSPs)
scaffold0014 (12-106)||(68290-68384)
[»] scaffold0007 (1 HSPs)
scaffold0007 (4-106)||(233937-234039)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-108)||(69310-69413)
[»] scaffold0038 (1 HSPs)
scaffold0038 (4-112)||(25802-25910)
[»] scaffold0113 (1 HSPs)
scaffold0113 (4-106)||(41003-41105)
[»] scaffold0021 (1 HSPs)
scaffold0021 (4-108)||(116288-116392)
[»] scaffold0034 (1 HSPs)
scaffold0034 (4-107)||(95584-95686)
[»] scaffold0045 (2 HSPs)
scaffold0045 (2-91)||(50630-50719)
scaffold0045 (57-105)||(53358-53406)
[»] scaffold0325 (1 HSPs)
scaffold0325 (5-75)||(17502-17572)
[»] scaffold1152 (1 HSPs)
scaffold1152 (4-106)||(762-863)
[»] scaffold0674 (1 HSPs)
scaffold0674 (57-107)||(7915-7965)
[»] scaffold0549 (1 HSPs)
scaffold0549 (57-107)||(7406-7456)
[»] scaffold0002 (1 HSPs)
scaffold0002 (4-78)||(146933-147007)
[»] scaffold0206 (1 HSPs)
scaffold0206 (55-106)||(10990-11040)
[»] scaffold1266 (1 HSPs)
scaffold1266 (4-78)||(376-450)
[»] scaffold0263 (1 HSPs)
scaffold0263 (4-106)||(19585-19687)


Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 200 - 447
Target Start/End: Complemental strand, 51827036 - 51826789
Alignment:
Q  200 catggcaagtcagctataaatattgaggacatggaattcataacaacaagttctgtttaacaatttaaaaaacaatttggcataaatcatggccttcttg 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  51827036 catggcaagtcagctataaatattgaggacatggaattcataacaacaagttctgtttaacaatttaaaaaacaatttggcataaatcatgaccttcttg 51826937  T
Q  300 tattatcgctgatgaatggaagtgctgttctacttgttcaacaagttcaatagaacaagatgtatgcatacatttttctacataataatgcttgttaatt 399  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51826936 tattatcgctgatgattggaagtgcttttctacttgttcaacaagttcaatagaacaagatgtatgcatacatttttctacataataatgcttgttaatt 51826837  T
Q  400 taatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 447  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  51826836 taatcttgattaatattttgaattcaaaatgattgaggttgctgtatc 51826789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 200 - 447
Target Start/End: Original strand, 48648724 - 48648971
Alignment:
Q  200 catggcaagtcagctataaatattgaggacatggaattcataacaacaa-gttctgtttaacaatttaaaaaacaatttggcataaatcatggccttctt 298  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48648724 catggcaagtcagctgtaaatattgaggacatgaaattcataacaacaaagttctgttcaacaatttaaaaaacaatttggcataaatcatggccttctt 48648823  T
Q  299 gtattatcgctgatgaatggaagtgctgttctacttgttcaacaagttcaatagaacaagatgtatgcatacatttttctacataataatgcttgttaat 398  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  48648824 -tattatcgctgatgaatggaagtgatgttctacttgttcaacaagttcaataaaacaagatgcatgcatacatttttctacataataatgcttgttaat 48648922  T
Q  399 ttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48648923 ttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 48648971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 52520765 - 52520869
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  52520765 taattaatttataataatgtcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcagga 52520864  T
Q  104 ccctt 108  Q
    |||||    
T  52520865 ccctt 52520869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 43786955 - 43787062
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43786955 taattaatttataataatatcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcagga 43787054  T
Q  104 cccttatt 111  Q
    ||||||||    
T  43787055 cccttatt 43787062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 39074503 - 39074608
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  39074503 taattaatttataataatgtcaaaa-cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcagga 39074601  T
Q  104 cccttat 110  Q
    |||||||    
T  39074602 cccttat 39074608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 6842703 - 6842805
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  6842703 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaaccagtgccccgggggcagcggttagcagga 6842802  T
Q  104 ccc 106  Q
    |||    
T  6842803 ccc 6842805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 10617386 - 10617284
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  10617386 taattaatttataataaagtcaaaaacaatttccttttatggtaataattcccttttatggtatgcttaacccgtgccccgggggcaccggttagcagga 10617287  T
Q  104 ccc 106  Q
    |||    
T  10617286 ccc 10617284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 49893415 - 49893523
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||| |||||||| |||||||||||||||| |||    
T  49893415 taattaatctataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaatcagtgccccgggggcaccggttagccgga 49893514  T
Q  104 cccttatta 112  Q
    ||| |||||    
T  49893515 cccatatta 49893523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 272304 - 272406
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| ||| ||||||||||||||||| | |||||| ||||||||||||||||||||    
T  272304 taattaatttataataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgcttaatcggtgccccgggggcaccggttagcagga 272403  T
Q  104 ccc 106  Q
    |||    
T  272404 ccc 272406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 4168267 - 4168372
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||| ||  ||||||||||||||||||| || ||| ||||||||||||||||||||    
T  4168267 taattaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaacccgtaccccgggggcaccggttagcagga 4168366  T
Q  104 ccctta 109  Q
    ||||||    
T  4168367 ccctta 4168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 11651976 - 11652045
Alignment:
Q  378 tacataataatgcttgttaatttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651976 tacataataatgcttgttaatttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 11652045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 48725355 - 48725459
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||  ||| |||||||||||    
T  48725355 taattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggaccacgggttagcagga 48725454  T
Q  104 ccctt 108  Q
    |||||    
T  48725455 ccctt 48725459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 858673 - 858776
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| | | ||||||||||||||||||| |||||| |||||||||||||||| |||    
T  858673 taattaattgataataaagtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaacccgtgccccgggggcaccggttagccgga 858772  T
Q  104 ccct 107  Q
    ||||    
T  858773 ccct 858776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 46352718 - 46352820
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| |||| || |||||||||||||||||||||| ||| ||||||||||||||||||| |||||| || |||||||||||||||||    
T  46352718 taattaattgataataaagtcagaaacagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccccggaggcaccggttagcagga 46352817  T
Q  104 ccc 106  Q
    |||    
T  46352818 ccc 46352820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 53489926 - 53489821
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| || ||||||||||||||||||||| ||||| || |||||| |||| | |||    
T  53489926 taattaatttataataatgtcaaaaacagtttccttttatgataataattctattttatggtatgcttaaccaatgccccggtggcaccagttaaccgga 53489827  T
Q  104 ccctta 109  Q
    ||||||    
T  53489826 ccctta 53489821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 40362682 - 40362578
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||||||||| ||  |||||||||||||||||||||||||| ||||| |||| |||||||||    
T  40362682 taattaattgataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggtaccgattagcagga 40362583  T
Q  104 ccctt 108  Q
    |||||    
T  40362582 ccctt 40362578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 2505433 - 2505523
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccgg 94  Q
    ||||||||| ||||||| |||||||  ||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  2505433 taattaattcataataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaaccagtgccctgggggcaccgg 2505523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 41554042 - 41553940
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| |   |||||||||||||||||| |||||||||||  ||||| |||| ||||    
T  41554042 taattaatttataataaagtcaaaaacagtttccttttatggtaataattattttttatggtatgcttaacaagtgccctgggaacaccgattagtagga 41553943  T
Q  104 ccc 106  Q
    |||    
T  41553942 ccc 41553940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 49529368 - 49529269
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||||| | | |||||||||||| ||||||||||||  ||||||||||||||||| ||    
T  49529368 taattaatttataataaagtcaaaaacattttccttttatggtaataatttccttttatggtatgtttaaccagtgcc--gggggcaccggttagcaaga 49529271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 2938140 - 2938039
Alignment:
Q  6 attaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggacc 105  Q
    ||||||||||||||| ||||||| || |||| |||||||||||||| ||  |||||||||||||||||| ||| ||| | ||||||||||||||||||||    
T  2938140 attaatttataataaagtcaaaaacaatttcattttatggtaataattcacttttatggtatgcttaacgagtaccccgagggcaccggttagcaggacc 2938041  T
Q  106 ct 107  Q
    ||    
T  2938040 ct 2938039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 41304087 - 41304184
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| | | |||||||||||||||||||| ||||| || | |||||||||||||    
T  41304087 taattaattgataataaagtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccaatgccccggagacaccggttagcag 41304184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 7468493 - 7468595
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||| ||||||| |||||| |||||||| |||||| ||| ||||||||||||||||| ||||||||  || ||||||||||||||    
T  7468493 tataattaatttataataaagtcaaaagcagttttcttttatgataataa-tcccttttatggtatgcttaatcagtgccc-cggagcaccggttagcag 7468590  T
Q  102 gaccc 106  Q
    |||||    
T  7468591 gaccc 7468595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 11308312 - 11308210
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| |||||||  ||||||  ||||||||||||||||||||| ||| |||||||||||||||||||| |||||  ||||||||| |||||||||    
T  11308312 taattaattgataataaaatcaaaaatagtttccttttatggtaataattcc-ttttatggtatgcttaaccaatgccccaggggcaccgattagcagga 11308214  T
Q  104 ccct 107  Q
    ||||    
T  11308213 ccct 11308210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 33140967 - 33141070
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||||| ||| ||||||| ||||||||| |||| ||| ||  |||||||||||||     
T  33140967 tataattaatttataataaagtcaaaagcagttttcttttatggtaataattcccttttatgatatgcttaatcagtaccccggaagcaccggttagcaa 33141066  T
Q  102 gacc 105  Q
    ||||    
T  33141067 gacc 33141070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 43269841 - 43269738
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||  |||||  |||||||||||||| ||||||| |    ||||||||||||||||||||||||| || |||||||||||||||||    
T  43269841 taattaatttataataaaatcaaacacagtttccttttatagtaataattatcctttatggtatgcttaaccagtgccccggaggcaccggttagcagga 43269742  T
Q  104 ccct 107  Q
    ||||    
T  43269741 ccct 43269738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 18014756 - 18014861
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||  |||||||| || |||| ||||||||||||||| |||||| | | ||||||||||||||||| |||||||| ||||||||| ||||||| ||    
T  18014756 taattaaactataataaagttaaaaacagtttccttttatgataataatttccttttatggtatgcttaatcagtgccccgggggcaccagttagcaaga 18014855  T
Q  104 ccctta 109  Q
    ||||||    
T  18014856 ccctta 18014861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 28139391 - 28139488
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagc 99  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||||||| ||| ||||||||||| ||||| |||||| |||  | |||||||||||    
T  28139391 tataattaatttataataaagtcaaaagcagattccttttatggtaataattcccttttatggtatacttaaacagtgctctgaagacaccggttagc 28139488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 42964351 - 42964246
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| ||||||| ||||||| ||  ||||||| ||||||||||||||| |   ||| |||||||||||||||    
T  42964351 taattaatttataataaagtcaaaaacagttttcttttatagtaataattcacttttatgatatgcttaaccagtgtctcagggacaccggttagcagga 42964252  T
Q  104 ccctta 109  Q
    ||||||    
T  42964251 ccctta 42964246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 20924076 - 20924173
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||| ||  ||||||||||| ||||||||||| |||  | ||||||||||||||||    
T  20924076 taattaatttataataatatcaaaaacagtttccttttaaggtaataattctcttttatggtatacttaaccagtgtcct--gagcaccggttagcagga 20924173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 42548179 - 42548255
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgc 80  Q
    ||||||||||||||||| |||||||  | |||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  42548179 taattaatttataataaagtcaaaaataatttcattttatggtaataattcccttttatggtatgcttaaccagtgc 42548255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 41993721 - 41993617
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| || |||| ||||||||||||||  |||||| ||  |||||||||||||||||| ||| ||||   ||||||||||||||| |    
T  41993721 taattaatttataataaagttaaaaacagtttccttttata-taataattctcttttatggtatgcttaactagtaccctaaaggcaccggttagcagaa 41993623  T
Q  104 ccctta 109  Q
    ||||||    
T  41993622 ccctta 41993617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 22248970 - 22249066
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||||||||| ||| |||||| |||||||| |||| | |||| |  |||||||||||||    
T  22248970 taattaattgataataaagtcaaaaacagttttcttttatggtaataattcccttttatagtatgcttgaccaataccctagaagcaccggttagca 22249066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 24488450 - 24488551
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| |||||||  |||||| ||||||| |||||||||||||| ||  ||||||| |||||| ||| ||||| | ||| |||||||||| |||||    
T  24488450 taattaattgataataaaatcaaaaacagtttctttttatggtaataattctcttttatgatatgctgaactagtgctccgggagcaccggttaacagga 24488549  T
Q  104 cc 105  Q
    ||    
T  24488550 cc 24488551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 50359288 - 50359177
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||| |||||||| ||||||| |||||| ||||| ||||||||| |   || |||||||||||||||||||| || ||  |||||||||| | |||    
T  50359288 taattaatatataataaagtcaaaaacagttttcttttgtggtaataattatcttctatggtatgcttaaccagtgtcccggaagcaccggttaaccgga 50359189  T
Q  104 cccttattaaaa 115  Q
    |||  |||||||    
T  50359188 cccaaattaaaa 50359177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 11651919 - 11651961
Alignment:
Q  308 ctgatgaatggaagtgctgttctacttgttcaacaagttcaat 350  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  11651919 ctgatgaattgaagtgctgttctacttgttcaacaagttcaat 11651961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 38852301 - 38852379
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccc 82  Q
    ||||||||||||||||| ||||||| ||||||  ||||||| |||||| ||  |||||||||||| |||||| ||||||    
T  38852301 taattaatttataataaagtcaaaaacagttttattttatgataataattcacttttatggtatgtttaacccgtgccc 38852379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 50299047 - 50298973
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagt 78  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| |||||| ||  | ||||||||| ||||||||||    
T  50299047 taattaatttataataaagtcaaaaacagtttctttttatgataataattcactcttatggtatacttaaccagt 50298973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 52552558 - 52552658
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||| || |||||||||||||| ||  |||||||||||  |||||||||| || |||| || ||||||||| ||    
T  52552558 taattaatttataataaagtcaaaaacagtatc-ttttatggtaataattctcttttatggtatatttaaccagtgtcc-ggggacatcggttagcatga 52552655  T
Q  104 ccc 106  Q
    |||    
T  52552656 ccc 52552658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 29241721 - 29241790
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaa 73  Q
    ||||||||||||||||| ||||||| ||| ||| ||||||| |||||| ||| |||||| ||||||||||    
T  29241721 taattaatttataataaagtcaaaaacagattctttttatgataataattccgttttatagtatgcttaa 29241790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 50395664 - 50395560
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| || ||||||||||||||||||| ||  ||||||| |||| |||| |||| | | || | ||||| |||||||||    
T  50395664 taattaattgataataaagtcaaaa-caatttccttttatggtaataattctcttttatgatatgattaatcagtacaccggagacaccgattagcagga 50395566  T
Q  104 ccctta 109  Q
    ||||||    
T  50395565 ccctta 50395560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 52246664 - 52246768
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttcctttt-atggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||||| ||||||| || |||  |||| || ||||||| | | |||||||||||||||||| ||||||| | | ||||| |||||||    
T  52246664 tataattaatttataataaagtcaaaaacaattttttttttatagtaataatttccttttatggtatgcttaactagtgccc-gagagcaccagttagca 52246762  T
Q  101 ggaccc 106  Q
    ||||||    
T  52246763 ggaccc 52246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 13159981 - 13160055
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagt 78  Q
    ||||||||| ||||||| ||||||| |||||| || ||| |||||||| | | ||||||||||||||||| ||||    
T  13159981 taattaattgataataaagtcaaaaacagttttctattacggtaataatttctttttatggtatgcttaatcagt 13160055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 2119515 - 2119577
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatg 68  Q
    ||||||||||||||||| ||||||| || ||||||||||| ||||||| ||| ||||||||||||    
T  2119515 taattaatttataataaagtcaaaaacaatttccttttat-gtaataattcc-ttttatggtatg 2119577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 2362949 - 2363003
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggacccttatt 111  Q
    ||||||||||||||||| |||||||| ||   || ||||||||||||||||||||    
T  2362949 ttttatggtatgcttaatcagtgccccggaaacatcggttagcaggacccttatt 2363003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 53163911 - 53163953
Alignment:
Q  65 tatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    ||||||||||| |||||| || |||||||||||||||||||||    
T  53163911 tatgcttaacctgtgccccggaggcaccggttagcaggaccct 53163953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 11651880 - 11651908
Alignment:
Q  220 tattgaggacatggaattcataacaacaa 248  Q
    |||||||||||||||||||||||||||||    
T  11651880 tattgaggacatggaattcataacaacaa 11651908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 51827063 - 51827031
Alignment:
Q  260 caatttaaaaaacaatttggcataaatcatggc 292  Q
    |||||||||||| ||||||||||||||||||||    
T  51827063 caatttaaaaaataatttggcataaatcatggc 51827031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 200 - 447
Target Start/End: Original strand, 24158371 - 24158618
Alignment:
Q  200 catggcaagtcagctataaatattgaggacatggaattcataacaacaa-gttctgtttaacaatttaaaaaacaatttggcataaatcatggccttctt 298  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24158371 catggcaagtcagctgtaaatattgaggacatgaaattcataacaacaaagttctgttcaacaatttaaaaaacaatttggcataaatcatggccttctt 24158470  T
Q  299 gtattatcgctgatgaatggaagtgctgttctacttgttcaacaagttcaatagaacaagatgtatgcatacatttttctacataataatgcttgttaat 398  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  24158471 -tattatcgctgatgaatggaagtgatgttctacttgttcaacaagttcaataaaacaagatgcatgcatacatttttctacataataatgcttgttaat 24158569  T
Q  399 ttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24158570 ttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 24158618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 16536132 - 16536239
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  16536132 taattaatttataataatgtcaaaaacagtttccttttatggtaataattctattttatggtattcttaaccagtgccccgggggcaccggttagcagga 16536231  T
Q  104 cccttatt 111  Q
    ||||||||    
T  16536232 cccttatt 16536239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 29591276 - 29591385
Alignment:
Q  7 ttaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | | |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  29591276 ttaatttataataaagtcaaaaacagtttccttttatggtaataattaccttttatggtatgcttaactagtgccccgggggcaccggttagcaggaccc 29591375  T
Q  107 ttattaaaat 116  Q
    ||||||||||    
T  29591376 ttattaaaat 29591385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 36395183 - 36395292
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| |||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  36395183 taattaatttataataaagtcaaaagcagttttcttttatgataataattcccttttatggtatgcttaaccagtgccctgggggcaccagttagcagga 36395282  T
Q  104 cccttattaa 113  Q
    ||||||||||    
T  36395283 cccttattaa 36395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 4089226 - 4089333
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||  |||||||||||| |||||||||||||  |||||||| ||||||||||    
T  4089226 taattaatttataataatgtcaaaaacagtttccttttatggtaataattctcttttatggtatgtttaaccagtgccccaggggcaccagttagcagga 4089325  T
Q  104 cccttatt 111  Q
    ||||||||    
T  4089326 cccttatt 4089333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 4268924 - 4268822
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||||||||||| ||||||||||||| | ||||||||||||||||||    
T  4268924 taattaatttataataatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgattaaccagtgccccgagggcaccggttagcagga 4268825  T
Q  104 ccc 106  Q
    |||    
T  4268824 ccc 4268822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 33108777 - 33108672
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| |||||| || |||||||||||||||    
T  33108777 tataattaattgataataaagtcaaaaacagtttccttttatggtaataattcctttttatggtatgcttaacccgtgccccggaggcaccggttagcag 33108678  T
Q  102 gaccct 107  Q
    ||||||    
T  33108677 gaccct 33108672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 7769022 - 7769134
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| ||  |||||||| || ||||||| |||||| ||||||||||||||||||||    
T  7769022 taattaatttataataatgttaaaaacagtttccttttatggtaataattctcttttatggcatacttaacccgtgccccgggggcaccggttagcagga 7769121  T
Q  104 cccttattaaaat 116  Q
    ||||| |||||||    
T  7769122 ccctttttaaaat 7769134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 43202485 - 43202382
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||  |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  43202485 taattaatttataataatgtcaaaaacagttttcttttatggtaataattctcttttatggtaagcttaaccagtgccc-gggggcaccggttagcagga 43202387  T
Q  104 ccctt 108  Q
    |||||    
T  43202386 ccctt 43202382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 43944591 - 43944692
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||| | ||||||||||||||| ||    
T  43944591 taattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttgtatggtatgcttaaccagtgccc-gagggcaccggttagcaaga 43944689  T
Q  104 ccc 106  Q
    |||    
T  43944690 ccc 43944692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12356325 - 12356430
Alignment:
Q  1 atataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||  |||||||||||||||||||||||  | |||||||||||||||||    
T  12356325 atataattaatttataataaagtcaaaaacagtttccttttatgataataattctcttttatggtatgcttaaccagtgttccgggggcaccggttagca 12356424  T
Q  101 ggaccc 106  Q
    ||||||    
T  12356425 ggaccc 12356430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 372 - 447
Target Start/End: Complemental strand, 5590413 - 5590338
Alignment:
Q  372 tttttctacataataatgcttgttaatttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 447  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5590413 tttttttacataataatgcttgttaattaaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 5590338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 16820936 - 16821039
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||| ||||||||| |||| |  |||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  16820936 taattaacttataataaagtcatacgcagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 16821035  T
Q  104 ccct 107  Q
    ||||    
T  16821036 ccct 16821039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 372 - 447
Target Start/End: Original strand, 48127957 - 48128032
Alignment:
Q  372 tttttctacataataatgcttgttaatttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 447  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48127957 tttttttacataataatgcttgttaattaaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 48128032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 789632 - 789530
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||  ||  | ||||||||||||| |||    
T  789632 taattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtagcccagaggcaccggttagcggga 789533  T
Q  104 ccc 106  Q
    |||    
T  789532 ccc 789530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 50619173 - 50619274
Alignment:
Q  7 ttaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    |||||||||||||| || |||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  50619173 ttaatttataataaagtaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc-aggggcaccggttagcgggaccc 50619271  T
Q  107 tta 109  Q
    |||    
T  50619272 tta 50619274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 18067981 - 18067877
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||| ||| |||||||||||| |||||| || ||| ||||||||||||||||| ||    
T  18067981 taattaatttatcataatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaaga 18067882  T
Q  104 ccctt 108  Q
    |||||    
T  18067881 ccctt 18067877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 54897390 - 54897494
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||| ||||||| || ||||||||||||||||||| | | |||||||||||| |||||||||| || || |||||||||||||||    
T  54897390 tataattaatttataataaagtcaaaaacaatttccttttatggtaataatttccttttatggtatgtttaaccagtgtcccggaggcaccggttagcag 54897489  T
Q  102 gaccc 106  Q
    |||||    
T  54897490 gaccc 54897494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 15186327 - 15186423
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||      |||||||||||| |||||||||||||| |||||    
T  15186327 taattaatttataataatgtcaaaaacagtttccttttatggtaataattccattttatgg------taaccagtgccccgggggcaccggttaacagga 15186420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 19503207 - 19503107
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| ||| |||||||||||||||||| ||| || |||||||| |||||||| |||    
T  19503207 taattaatttataataaagtcaaaaacagtttccttttattgtaataattcccttttatggtatgcttaactagtaccttgggggcatcggttagcggga 19503108  T
Q  104 c 104  Q
    |    
T  19503107 c 19503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 6164177 - 6164279
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |  |||| |||||||||||||||||||||| ||  |||||||||||||||||||||| ||| | || |||||||||||||||    
T  6164177 taattaatttataataaagcaaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtaccccgaggacaccggttagcagga 6164276  T
Q  104 ccc 106  Q
    |||    
T  6164277 ccc 6164279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 32217129 - 32217232
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||  ||||||| |||||| ||| ||||||||||||||||||| |||||| || ||||||||||| |||||    
T  32217129 taattaatttataataaagtcaaaaacagtttt-ttttatgataataattcccttttatggtatgcttaacctgtgccccggaggcaccggttaacagga 32217227  T
Q  104 ccctt 108  Q
    |||||    
T  32217228 ccctt 32217232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 30387236 - 30387133
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||| ||||||||| || | ||||||   ||||||||||||| |    
T  30387236 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcctttttatgatatgcttaatcaataccctggaaacaccggttagcagaa 30387137  T
Q  104 ccct 107  Q
    ||||    
T  30387136 ccct 30387133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 5091712 - 5091612
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||| || |||||||||||||| ||||||| ||| |||||| |||||||||||||||| || ||| ||||||||||||||||    
T  5091712 taattaatttataataaagtcataaacagtttccttttatagtaataattcccttttat-gtatgcttaaccagtgtcc-gggagcaccggttagcagga 5091615  T
Q  104 ccc 106  Q
    |||    
T  5091614 ccc 5091612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 3783603 - 3783496
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgctta---accagtgccctgggggcaccggttagca 100  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||||||||| ||| ||||||||||||||||   || ||||||| ||| |||||||||| ||    
T  3783603 taattaattgataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaagtactagtgccccgggagcaccggttaaca 3783504  T
Q  101 ggaccctt 108  Q
    ||||||||    
T  3783503 ggaccctt 3783496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 39877351 - 39877247
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatgg--tatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||| ||||||| ||||||| |||||| ||||||| ||  ||||||||  |||||||||||||||||| || ||||| |||||||||    
T  39877351 taattaatttataataaagtcaaaaacagtttcattttatagtaataattctcttttatggtatatgcttaaccagtgccccggaggcacgggttagcag 39877252  T
Q  102 gaccc 106  Q
    |||||    
T  39877251 gaccc 39877247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 55882767 - 55882871
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||| || ||  ||||||||||| ||||||| |||||  ||||||||||||||| ||||    
T  55882767 taattaatttataataaagtcaaaaacagttttcttttatggtaa-aattcacttttatggtatacttaacccgtgcctcgggggcaccggttagtagga 55882865  T
Q  104 ccctta 109  Q
    ||||||    
T  55882866 ccctta 55882871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 37988019 - 37988124
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||| ||  |||||| ||||||||||||| | ||| |   ||||||||||| ||||    
T  37988019 taattaatttataataatgttaaaaacagtttccttttattgtaataattctcttttatagtatgcttaaccaatcccccgaaagcaccggttagtagga 37988118  T
Q  104 ccctta 109  Q
    ||||||    
T  37988119 ccctta 37988124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 39843991 - 39844060
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaa 73  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||| |||||||||||    
T  39843991 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcctttttagggtatgcttaa 39844060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 31517284 - 31517362
Alignment:
Q  38 ttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggacccttattaaaatt 117  Q
    |||||||||||||| ||  || |||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  31517284 ttttatggtaataattctcttatatggtatgcttaaccagtgcc-tgggggcaccgattagaaggacccttattaaaatt 31517362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 32202582 - 32202476
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||| ||| ||||||| ||||||||| || || ||  | |||||| |||| |||||    
T  32202582 taattaatttataataaagtcaaaaacagtttccttttatgataataattcc-ttttatgatatgcttaatcaatgtcccagaggcaccagttaacagga 32202484  T
Q  104 cccttatt 111  Q
    ||||||||    
T  32202483 cccttatt 32202476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 50603311 - 50603417
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttcctttt-atggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagg 102  Q
    ||||||||||||||||||||||||| ||||||  |||| ||| |||||| ||  |||||||||||||||||||||| ||| | |  |||| |||||||||    
T  50603311 taattaatttataataatgtcaaaaacagttttttttttatgataataattctcttttatggtatgcttaaccagtaccccgagaacaccagttagcagg 50603410  T
Q  103 accctta 109  Q
    |||||||    
T  50603411 accctta 50603417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 54054666 - 54054720
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggacccttatt 111  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  54054666 ttttatggtatgcttaaccagtgccccgggggcaccggttggcaggacccttatt 54054720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 4220279 - 4220383
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || ||| ||||||| ||||||| ||| ||||||||||||||||||  |||| | |  |||||||||||||| ||    
T  4220279 taattaatttataataaagtcaaaaacaattttcttttat-gtaataattcccttttatggtatgcttaacatgtgctccgtaggcaccggttagcatga 4220377  T
Q  104 ccctta 109  Q
    ||||||    
T  4220378 ccctta 4220383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 46688273 - 46688212
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggacccttattaaaattg 118  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||    
T  46688273 ttttatggtatgcttaaccagtgctctgggggcaccggttagcagaacctttattataattg 46688212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 47231974 - 47231881
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggtta 97  Q
    ||||||||| ||||||| ||||||| ||||||||||||||| |||||| ||| |||||||||||| ||||||| | ||| ||  ||||||||||    
T  47231974 taattaattgataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaaccaataccccggaagcaccggtta 47231881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 52533888 - 52533816
Alignment:
Q  3 ataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaacc 75  Q
    |||||||||| ||||||| ||| ||| |||||||||||||||||||||| ||| |||||||||||| ||||||    
T  52533888 ataattaattgataataaagtcgaaaacagtttccttttatggtaataattcccttttatggtatgtttaacc 52533816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 46149023 - 46149098
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtg 79  Q
    ||||||||||||||||| ||||||| || |||| |||||||||||||| ||  |||||||||||| ||||||||||    
T  46149023 taattaatttataataaagtcaaaaacaatttctttttatggtaataattctcttttatggtatgtttaaccagtg 46149098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 54945880 - 54945780
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || |||| ||||||||| |||| ||| ||||||||||| |||||||||||| |  ||  |||||||||||||||    
T  54945880 taattaatttataataaagtcaaaaacaatttcgttttatggt-ataattcctttttatggtatacttaaccagtgctc-cggaacaccggttagcagga 54945783  T
Q  104 ccc 106  Q
    |||    
T  54945782 ccc 54945780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 31680567 - 31680494
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaacc 75  Q
    ||||||||||||||||||| ||||||| || ||||||||||||||||||| ||  ||||||| |||| ||||||    
T  31680567 tataattaatttataataaagtcaaaaacaatttccttttatggtaataattcatttttatgatatgtttaacc 31680494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 53655980 - 53655887
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggtta 97  Q
    ||||||||||||||||| || ||||  | |||  |||||||||||||| | ||||||||||||||||||| |||||||  || |||||||||||    
T  53655980 taattaatttataataaagttaaaaataattttattttatggtaataatttcattttatggtatgcttaatcagtgcctcggaggcaccggtta 53655887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 54655978 - 54655879
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || ||| |||||| | |||||| ||  | ||||| ||||||||||||||| ||  |||||||||||||||||||    
T  54655978 taattaatttataataaagtcaaaaacaattttcttttaggataataattctctcttatgatatgcttaaccagtgtcc-cggggcaccggttagcagga 54655880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 30154265 - 30154187
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccc 82  Q
    |||||||||||||||||  |||||| || ||||||| |||| |||||| ||  ||||||||| ||||||||||||||||    
T  30154265 taattaatttataataaaatcaaaaacaatttccttatatgataataattctcttttatggtgtgcttaaccagtgccc 30154187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 42898848 - 42898739
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatg--gtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||| |||||||  |||||| |||||||  ||||||| ||  |||||||||||||||||||| || || |||| ||||| || |||     
T  42898848 taattaatttataataaagtcaaaaatagtttctttttatgtggtaataattctcttttatggtatgcttaaccaatgtcccggggacaccgattcgcat 42898749  T
Q  102 gacccttatt 111  Q
    || |||||||    
T  42898748 gatccttatt 42898739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 53004058 - 53003954
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||| |||||||| |||||||  | ||||||||||   |||||| ||  ||||||| ||||||||| ||||| ||  ||| |||||||||||||||    
T  53004058 taattaatgtataataaagtcaaaaataatttccttttaaaataataattctcttttatgatatgcttaatcagtgtccccgggacaccggttagcagga 53003959  T
Q  104 ccctt 108  Q
    |||||    
T  53003958 ccctt 53003954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 46688307 - 46688264
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggta 47  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||    
T  46688307 taattaatttataataaagtcaaaagcagtttccttttatggta 46688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 24679744 - 24679671
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagt 78  Q
    ||||||||||||||||| || |||| || |||||||| |||||||||| ||  ||||||||||||||||| ||||    
T  24679744 taattaatttataataaagttaaaaacaatttccttt-atggtaataattctcttttatggtatgcttaatcagt 24679671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 28119978 - 28119905
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    ||||||||||||||| || | | |||| | ||||||||||||||||||| || | |||||||||||| ||||||    
T  28119978 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggagacaccggttagcatgaccct 28119905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 37402830 - 37402758
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    ||||||||||||||| || | | |||| || |||||||||||||||||| | ||||||||||||||| ||||||    
T  37402830 ttccttttatggtaagaatttccttttttg-tatgcttaaccagtgccccgagggcaccggttagcatgaccct 37402758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 5590465 - 5590425
Alignment:
Q  310 gatgaatggaagtgctgttctacttgttcaacaagttcaat 350  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  5590465 gatgaattgaagtgttgttctacttgttcaacaagttcaat 5590425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 48127905 - 48127945
Alignment:
Q  310 gatgaatggaagtgctgttctacttgttcaacaagttcaat 350  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  48127905 gatgaattgaagtgttgttctacttgttcaacaagttcaat 48127945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 8133791 - 8133838
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataa 51  Q
    ||||||||||||||||| |||||||  ||||| |||||||||||||||    
T  8133791 taattaatttataataaagtcaaaaatagttttcttttatggtaataa 8133838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 28120121 - 28120058
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggtta 97  Q
    ||||||||||||||| || | | |||| | |||||||||||| |||||| ||||||||||||||    
T  28120121 ttccttttatggtaagaatttcctttttttgtatgcttaacctgtgccccgggggcaccggtta 28120058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 10426066 - 10426103
Alignment:
Q  69 cttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  10426066 cttaaccagtgccccgggggcaccggttagcagcaccc 10426103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 28755704 - 28755803
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| || | || ||||||||||||||| |||| ||| | |||||| ||||||||||||  |||||  | | |||||||||||||||    
T  28755704 taattaattgataataaagttagaaacagtttccttttatgataat-acttccttttatagtatgcttaacccatgccc-cgagacaccggttagcagga 28755801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 292229 - 292305
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggacccttat 110  Q
    ||||||||||||||| || | | |||| | | |||||||||| |||||| || |||||||||||||| || ||||||    
T  292229 ttccttttatggtaaaaatttcctttttttgcatgcttaacccgtgccccggaggcaccggttagcacgatccttat 292305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 97
Target Start/End: Complemental strand, 25532991 - 25532963
Alignment:
Q  69 cttaaccagtgccctgggggcaccggtta 97  Q
    |||||||||||||||||||||||||||||    
T  25532991 cttaaccagtgccctgggggcaccggtta 25532963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 42815193 - 42815237
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttc-cttttatggta 47  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||    
T  42815193 taattaatttataataaagtcaaaaacagtttctcttttatggta 42815237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 218 - 447
Target Start/End: Original strand, 33435843 - 33436072
Alignment:
Q  218 aatattgaggacatggaattcataacaacaagttctgtttaacaatttaaaaaacaatttggcataaatcatggccttcttgtattatcgctgatgaatg 317  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33435843 aatattgaggacatggaattcataacaacaagttatgtttgacaatttaaaaaacaatttggcataaatcatggccttcttgtattatcgctgatgaatg 33435942  T
Q  318 gaagtgctgttctacttgttcaacaagttcaatagaacaagatgtatgcatacatttttctacataataatgcttgttaatttaatcttgattaatattt 417  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33435943 gaagtgttgttctacttgttcaacaagttcaatagaacaagatgtatgcatacatttttctacataataatgcttgttaatttaatcttgattaatattt 33436042  T
Q  418 tgaattcaaaatgattgaggctgctgtatc 447  Q
    |||||||||| ||| ||||| |||||||||    
T  33436043 tgaattcaaactgactgaggttgctgtatc 33436072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 392180 - 392285
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  392180 taattaatttataataatgtcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 392279  T
Q  104 ccctta 109  Q
    ||||||    
T  392280 ccctta 392285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 32929610 - 32929505
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  32929610 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 32929511  T
Q  104 ccctta 109  Q
    ||||||    
T  32929510 ccctta 32929505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 4215779 - 4215892
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  4215779 taattaatttataataatgtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcagga 4215878  T
Q  104 cccttattaaaatt 117  Q
    ||||| ||| ||||    
T  4215879 cccttcttataatt 4215892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 3515850 - 3515963
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||||| ||||||  |||||||||||||||||||    
T  3515850 taattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgtttaacctgtgccccaggggcaccggttagcagga 3515949  T
Q  104 cccttattaaaatt 117  Q
    ||| |||| |||||    
T  3515950 cccatatttaaatt 3515963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 32985295 - 32985192
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||| ||| |||||||||||||||||||||||||| |||||||||||||||||| |    
T  32985295 taattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagaa 32985196  T
Q  104 ccct 107  Q
    ||||    
T  32985195 ccct 32985192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 23402223 - 23402327
Alignment:
Q  5 aattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggac 104  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||||||||||    
T  23402223 aattaatttataataaagtcaaaaacagtttccttttatggtaataattaccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggac 23402322  T
Q  105 cctta 109  Q
    |||||    
T  23402323 cctta 23402327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 26467226 - 26467121
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| ||| ||||||||||||  |||||||||||| || |||||||||||||| ||    
T  26467226 taattaatttataataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgtctaaccagtgccccggaggcaccggttagcatga 26467127  T
Q  104 ccctta 109  Q
    ||||||    
T  26467126 ccctta 26467121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 27433576 - 27433680
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||| ||| |||||||||||| |||||| || ||| ||||||||||||||||| ||    
T  27433576 taattaatttatcataatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaaga 27433675  T
Q  104 ccctt 108  Q
    |||||    
T  27433676 ccctt 27433680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 2581036 - 2581139
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||  | ||||||||||||||||||| ||| |||||||||||||||||||| | ||| ||| ||||||||||||||||    
T  2581036 taattaatttataataaagtcaaaaataatttccttttatggtaataattcccttttatggtatgcttaaccaataccccgggagcaccggttagcagga 2581135  T
Q  104 ccct 107  Q
    ||||    
T  2581136 ccct 2581139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 18276717 - 18276612
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatgg---tatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| | | ||||||||   ||||||||||||||||||  ||||||||||||||||    
T  18276717 taattaatttataataaagtcaaaaacagtttccttttatggtaataatttccttttatggtattatgcttaaccagtgcccctggggcaccggttagca 18276618  T
Q  101 ggaccc 106  Q
    ||||||    
T  18276617 ggaccc 18276612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 12145219 - 12145117
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||| | | |||||| ||||||||||||||||| | || |||||||||||||||||    
T  12145219 taattaatttataataaagtcaaaaacagtttccttttatgataataatttccttttatagtatgcttaaccagtgctccggaggcaccggttagcagga 12145120  T
Q  104 ccc 106  Q
    |||    
T  12145119 ccc 12145117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 25165515 - 25165410
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| |||||||| |||||| ||  ||||| | |||||||||||| ||||||||| ||||||||||||||||    
T  25165515 taattaatttataataaagtcaaaaacagttttcttttatgataataattctcttttacgatatgcttaaccaatgccctgggagcaccggttagcagga 25165416  T
Q  104 ccctta 109  Q
    ||||||    
T  25165415 ccctta 25165410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 3026113 - 3026013
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||||||| ||  ||||||||||||||||| ||||| || | ||||||||||||||||    
T  3026113 tataattaatttataataatgtcaaaaacagttttcttttatcgtaataattctcttttatggtatgcttaatcagtgtcccgagggcaccggttagcag 3026014  T
Q  102 g 102  Q
    |    
T  3026013 g 3026013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 7851261 - 7851165
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||  ||||||| | | ||||||||||||    
T  7851261 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaactcgtgccctagagacaccggttagca 7851165  T

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Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 12525803 - 12525906
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||| ||| ||||||| |||||||||| |||||||  |||  ||||||||||||||    
T  12525803 taattaatttataataatgtcaaacacagtttcattttatggtaataattcccttttatgatatgcttaactagtgccccagggataccggttagcagga 12525902  T
Q  104 ccct 107  Q
    ||||    
T  12525903 ccct 12525906  T

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Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 5323484 - 5323573
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccg 93  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||| |||||||    
T  5323484 taattaatttataataaagtcaaaaacaatttccttttatggtaataattcccttttatggtatgcgtaaccggtgccctggaggcaccg 5323573  T

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Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 1391282 - 1391178
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||| ||||||| |||||| |||||||| |||||| ||| |||||||||||||||||||||||  |  ||  |||||||||||||    
T  1391282 tataattaatttataataaagtcaaaaacagttttcttttatgataataattcccttttatggtatgcttaaccagtgttccaggaacaccggttagcag 1391183  T
Q  102 gaccc 106  Q
    |||||    
T  1391182 gaccc 1391178  T

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Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 2350736 - 2350832
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| ||| ||||||| |||||||||||||| ||| || | ||||||||||||    
T  2350736 taattaatttataataaagtcaaaaatagtttccttttatggtaataattcccttttatgatatgcttaaccagtaccccggagacaccggttagca 2350832  T

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Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 35043975 - 35044074
Alignment:
Q  6 attaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggacc 105  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||| ||  ||||||||||||||||||||||||||  ||||||||||||| || ||||    
T  35043975 attaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaaccagtgccc-cggggcaccggttaacatgacc 35044073  T

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Target: chr6; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 1840349 - 1840244
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||| |||| |||||||||||||| |   |||||||||||| ||    
T  1840349 taattaatttataataaagttaaaaacagtttcctttcatggtaataattcccttttatgatatgtttaaccagtgccctagaaacaccggttagcaaga 1840250  T
Q  104 ccctta 109  Q
    ||||||    
T  1840249 ccctta 1840244  T

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Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 28225304 - 28225412
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||| ||| ||||||||||| ||||| ||||| || |  ||||| |||||| ||||    
T  28225304 taattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatccttaaacagtgacccgaaggcacaggttagtagga 28225403  T
Q  104 cccttatta 112  Q
    |||||||||    
T  28225404 cccttatta 28225412  T

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Target: chr6; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 31280403 - 31280501
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||||| ||     ||||||||||||||| ||||||| || |||||||||||||||    
T  31280403 tataattaatttataataatgtcaaaaacggtttccttttatagtaataattc-----tatggtatgcttaacgagtgccc-ggaggcaccggttagcag 31280496  T

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Target: chr6; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 29978322 - 29978420
Alignment:
Q  10 atttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccctta 109  Q
    ||||||||||| ||||||| ||||||  |||||||||||||| ||| ||||||| ||||||||||||| ||||| ||  |||||||||||||||||||||    
T  29978322 atttataataaagtcaaaaacagtttaattttatggtaataattcccttttatgatatgcttaaccagcgccct-ggaacaccggttagcaggaccctta 29978420  T

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Target: chr6; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 13417064 - 13416957
Alignment:
Q  4 taattaatttataataat---gtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||||   ||||||| |||||| ||||||||||||||| ||  ||||||  |||||||||||||||||| || |||||||||||||     
T  13417064 taattaatttataataataaagtcaaaaacagttttcttttatggtaataattctcttttataatatgcttaaccagtgccc-ggaggcaccggttagct 13416966  T
Q  101 ggaccctta 109  Q
    |||||||||    
T  13416965 ggaccctta 13416957  T

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Target: chr6; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 29451217 - 29451139
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccc 82  Q
    ||||||| ||||||||| ||||||  ||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||    
T  29451217 taattaaattataataaagtcaaacacagtttccttttatgataataattcccttttatggtatgcttaacccgtgccc 29451139  T

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Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 34706835 - 34706908
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    ||||||||||||||| || | | |||| | ||||||||||||||||||| ||||||||||||||||| ||||||    
T  34706835 ttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccgggggcaccggttagcaagaccct 34706908  T

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Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 9661068 - 9661128
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttat 62  Q
    ||||||||||||| ||||| || |||| |||||||||||||||||||||| ||||||||||    
T  9661068 tataattaatttaaaataaagttaaaagcagtttccttttatggtaataattccattttat 9661128  T

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Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 21878449 - 21878352
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||||| ||| |      ||||| |||||||||||||  ||  |||||||||||||||    
T  21878449 taattaatttataataaagtcaaaaacagtttctttttatggtaataattccct------gtatgtttaaccagtgccccaggaacaccggttagcagga 21878356  T

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Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 11115197 - 11115121
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccc 82  Q
    ||||||||||||||||||  |||||  ||||| ||||||||||||||| ||| ||||||| |||| |||||||||||||    
T  11115197 taattaatttataataat--caaaaatagttttcttttatggtaataattcccttttatgatatgtttaaccagtgccc 11115121  T

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Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 961093 - 961164
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaacc 75  Q
    ||||||||| ||||||| |||| || || |||||||||||| |||||| ||  |||||||||||||||||||    
T  961093 taattaattgataataaagtcagaaacaatttccttttatgataataattctcttttatggtatgcttaacc 961164  T

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Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 34477618 - 34477568
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    ||||||||||||||||||| |||||| || || ||||||||||||||||||    
T  34477618 ttttatggtatgcttaacccgtgccccggaggtaccggttagcaggaccct 34477568  T

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Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 34851951 - 34851849
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||| ||||||||||| |||||||  | ||||||||||| ||||||| ||  ||||||  |||||||||||||||  | || | ||||| |||||||||    
T  34851951 taattgatttataataaagtcaaaaataatttccttttatagtaataattctcttttataatatgcttaaccagtgttccggtgacaccgattagcagga 34851852  T
Q  104 ccc 106  Q
    |||    
T  34851851 ccc 34851849  T

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Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 22417303 - 22417360
Alignment:
Q  30 cagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggg 87  Q
    ||||||||||||||| |||||| ||  ||||||||||||||||| |||||||| ||||    
T  22417303 cagtttccttttatgctaataattctcttttatggtatgcttaatcagtgccccgggg 22417360  T

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Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 100
Target Start/End: Complemental strand, 3515803 - 3515772
Alignment:
Q  69 cttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||||||||||||||||||    
T  3515803 cttaaccagtgccctgggggcaccggttagca 3515772  T

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Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 100
Target Start/End: Original strand, 7851308 - 7851339
Alignment:
Q  69 cttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||||||||||||||||||    
T  7851308 cttaaccagtgccctgggggcaccggttagca 7851339  T

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Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 100
Target Start/End: Complemental strand, 20897985 - 20897954
Alignment:
Q  69 cttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||||||||||||||||||    
T  20897985 cttaaccagtgccctgggggcaccggttagca 20897954  T

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Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 28564322 - 28564388
Alignment:
Q  6 attaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaa 73  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||| | | |||| |||||| |||||    
T  28564322 attaatttataa-aatctcaaaaacagtttccttttatggtaataaattccttttttggtatccttaa 28564388  T

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Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 34712197 - 34712131
Alignment:
Q  34 ttccttttatggtaataact-ccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||| || | ||||||| || |||||||||| ||||||| |||||||||||||||||    
T  34712197 ttccttttatggtaagaatttccattttttg-tatgcttaactagtgccccgggggcaccggttagca 34712131  T

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Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 8701343 - 8701381
Alignment:
Q  69 cttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  8701343 cttaaccagtgccccgggggcaccggttagcagcaccct 8701381  T

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Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 33435744 - 33435778
Alignment:
Q  107 ttattaaaattgccttctttgtttttctactattt 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  33435744 ttattaaaatggccttctttgtttttctactattt 33435778  T

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Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 20898066 - 20898114
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||||||||||||||| ||||||  ||||||||||||||| ||||||    
T  20898066 ttttatggtatgcttaacctgtgccc-cggggcaccggttagccggaccc 20898114  T

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Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 33435810 - 33435842
Alignment:
Q  260 caatttaaaaaacaatttggcataaatcatggc 292  Q
    |||||||||||| ||||||||||||||||||||    
T  33435810 caatttaaaaaataatttggcataaatcatggc 33435842  T

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Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 200 - 444
Target Start/End: Complemental strand, 31953840 - 31953596
Alignment:
Q  200 catggcaagtcagctataaatattgaggacatggaattcataacaacaagttctgtttaacaatttaaaaaacaatttggcataaatcatggccttcttg 299  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  31953840 catgacaagtcagctgtaaatattgaggacatgaaattcataacaagaagttatgttcaacaatttaaaaaacaatttggcataaatcatggcattcttg 31953741  T
Q  300 tattatcgctgatgaatggaagtgctgttctacttgttcaacaagttcaatagaacaagatgtatgcatacatttttctacataataatgcttgttaatt 399  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31953740 tattatcgctgatgaatggaagtcttgttctacttgttcaacaagttcaatagaacaagatgtatgcatacatttttctacataataatgcttgttaatt 31953641  T
Q  400 taatcttgattaatattttgaattcaaaatgattgaggctgctgt 444  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  31953640 taatcttcattaatattttgaattcaaaatgattgaggctgctgt 31953596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 24438561 - 24438663
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  24438561 taattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 24438660  T
Q  104 ccc 106  Q
    |||    
T  24438661 ccc 24438663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 34333368 - 34333472
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||||| |||||| ||||||||||||||||||||    
T  34333368 taattaatttataataatgtcaaaa-cagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggcaccggttagcagga 34333466  T
Q  104 ccctta 109  Q
    ||||||    
T  34333467 ccctta 34333472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 24798505 - 24798403
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  24798505 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatagtatgcttaaccagtgccccgggggcaccagttagcagga 24798406  T
Q  104 ccc 106  Q
    |||    
T  24798405 ccc 24798403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 13064979 - 13064870
Alignment:
Q  4 taattaatttataataatgtcaaaat-cagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagg 102  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||| ||| |||||||||||||||||||||||| || |||||||||||||||||     
T  13064979 taattaatttataataaagtcaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgctctaggggcaccggttagcaga 13064880  T
Q  103 acccttatta 112  Q
    ||||||||||    
T  13064879 acccttatta 13064870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 4628650 - 4628752
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||| || |||||| ||||||||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  4628650 taattaatttataataaagtcagaaacagtttacttttatggtaataattcccttttatggtatgcttaaccagtgccttaggggcaccggttagcagga 4628749  T
Q  104 ccc 106  Q
    |||    
T  4628750 ccc 4628752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 29993589 - 29993487
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| || || |||| ||||||||||||    
T  29993589 taattaatttataataaagtcaaaatcaatttccttttatggtaataattcccttttatggtatgcttaaccagtgtcccggaggcatcggttagcagga 29993490  T
Q  104 ccc 106  Q
    |||    
T  29993489 ccc 29993487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 34606346 - 34606448
Alignment:
Q  5 aattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggac 104  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| | | ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  34606346 aattaatttataataaagtcaaaagcagtttccttttatggtaataattaccttttatggtatgcttaacccgtgccccgggagcaccggttagcaggac 34606445  T
Q  105 cct 107  Q
    |||    
T  34606446 cct 34606448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 42044395 - 42044293
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||| |||||||||||||  |||||||||||||||| ||    
T  42044395 taattaatttataataatgtcaaaaacagttttcttttatggtaataattcccttttatggtatgtttaaccagtgccc-cggggcaccggttagcatga 42044297  T
Q  104 ccct 107  Q
    ||||    
T  42044296 ccct 42044293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 5239369 - 5239471
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||  ||||||  ||||||| |||||||||||    
T  5239369 taattaatttataataatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgcttaacttgtgcccccggggcactggttagcagga 5239468  T
Q  104 ccc 106  Q
    |||    
T  5239469 ccc 5239471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 45045854 - 45045932
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccc 82  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  45045854 taattaatttataataatgtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaaccagtgccc 45045932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 31954599 - 31954530
Alignment:
Q  378 tacataataatgcttgttaatttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 447  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31954599 tacataatattgcttgttaatttaatcttgattaatattttgaattcaaaatgatcgaggctgctgtatc 31954530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 18486045 - 18486148
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||| | ||||||||||||||||||||| |||||| |  | ||||||||||||||     
T  18486045 taattaatttataataaagttaaaaacagtttccttttatggtaataatttcattttatggtatgcttaacccgtgccccgaagacaccggttagcaggg 18486144  T
Q  104 ccct 107  Q
    ||||    
T  18486145 ccct 18486148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 18117227 - 18117331
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||  |||||| ||||||| | ||||||||||||||||||||||||||||| || ||||| ||||| ||||    
T  18117227 taattaatttataataaagtcaaaaacagtttttttttatagtaataatttcattttatggtatgcttaaccagtgccct-ggagcaccagttagtagga 18117325  T
Q  104 ccctta 109  Q
    ||||||    
T  18117326 ccctta 18117331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 47839576 - 47839654
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccc 82  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||  ||||||||||||    
T  47839576 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgaataaccagtgccc 47839654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 12218538 - 12218434
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||  | ||||  ||||||||||||||||||||| ||  |||||||||||| |||||||||||||  ||| |||||||||||||||    
T  12218538 taattaatttataataaaataaaaaatagtttccttttatggtaataattctcttttatggtatgtttaaccagtgccc-cgggacaccggttagcagga 12218440  T
Q  104 ccctta 109  Q
    ||||||    
T  12218439 ccctta 12218434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 30810739 - 30810844
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||| |   |||||||||||| ||||||| |||||  |||| ||||||||| ||||    
T  30810739 taattaatttataataaagtcaaaaacagttttcttttatggtaataattttcttttatggtatgtttaaccaatgccccaggggtaccggttagtagga 30810838  T
Q  104 ccctta 109  Q
    ||||||    
T  30810839 ccctta 30810844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 7689302 - 7689222
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctg 84  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||| ||  ||||||||||| ||||||||||||||||    
T  7689302 taattaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatacttaaccagtgccctg 7689222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 28262110 - 28262207
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||| |||||||  |||||| |||||||||||||| ||||||| ||  |||||||||||||||||||| ||||||||  |||||||| |||||    
T  28262110 taattaattgataataaaatcaaaaacagtttccttttatagtaataattcttttttatggtatgcttaaccaatgccctggaagcaccggtcagcag 28262207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 43594140 - 43594063
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtg 79  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||| |||||| ||  |||||||||||||||||||||||    
T  43594140 tataattaatttataataaagtcaaaaacagtttcctcttatgataataattctcttttatggtatgcttaaccagtg 43594063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 525179 - 525076
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||||| ||  ||||||| |||| ||||||||| | |  || ||||||||||||||    
T  525179 tataattaatttataataaaatcaaaaacagtttccttttatggtaataattctcttttatgatatgtttaaccagtactc-cggagcaccggttagcag 525081  T
Q  102 gaccc 106  Q
    |||||    
T  525080 gaccc 525076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 28587993 - 28588093
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||| ||| |||||||||||| ||||||| | ||| |||  || ||||||||||||    
T  28587993 taattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatgtttaaccaataccccgggaacatcggttagcagga 28588092  T
Q  104 c 104  Q
    |    
T  28588093 c 28588093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 23363269 - 23363166
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||  ||  |||||||||||| ||||||||||||| |    ||||| |||||||||    
T  23363269 taattaatttataataaagttaaaaacagtttccttttatggtaatatttctcttttatggtatgtttaaccagtgccccgaaaacaccgattagcagga 23363170  T
Q  104 ccct 107  Q
    ||||    
T  23363169 ccct 23363166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 37674206 - 37674103
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| |||||||| ||  |  |   ||||||||||||||||||||||| ||  |||||||||||||||||||    
T  37674206 taattaatttataataaagtcaaaaacagttttcttttatgatataattttttttttatggtatgcttaaccagtgtcc--ggggcaccggttagcagga 37674109  T
Q  104 ccctta 109  Q
    ||||||    
T  37674108 ccctta 37674103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 1737064 - 1737160
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||| ||||||| || |||| || ||||| |||||| |||||| || ||||||||||||||||||||||||||| ||  ||||||||||||||    
T  1737064 taattaattgataataaagttaaaaacattttccatttatgataataattc-attttatggtatgcttaaccagtgccccggaagcaccggttagcag 1737160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 33636536 - 33636613
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgcc 81  Q
    ||||||||||||||||| || ||||  |||||  |||||||||||||| || ||||||||||||||||||||||||||    
T  33636536 taattaatttataataaagtaaaaaatagtttatttttatggtaataattctattttatggtatgcttaaccagtgcc 33636613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 23357814 - 23357711
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    |||||||||||||||| || ||||||| |||||||| |||||| |||||| ||  || |||| |||||||||||||||||| || | ||||| ||||||     
T  23357814 tataattaatttataaaaaagtcaaaaacagtttccatttatgataataattctcttctatgatatgcttaaccagtgccccggagacaccgattagcaa 23357715  T
Q  102 gacc 105  Q
    ||||    
T  23357714 gacc 23357711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 47083139 - 47083241
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| || |||| |||||||||||||||||||||| ||| ||||||| |||| ||||||| ||| |  |||||||||||||| || |    
T  47083139 taattaattgataataaagttaaaaacagtttccttttatggtaataattcccttttatgatatgtttaaccaatgctc-cggggcaccggttagtagaa 47083237  T
Q  104 ccct 107  Q
    ||||    
T  47083238 ccct 47083241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 8754687 - 8754617
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaac 74  Q
    ||||||||||||||||| ||||||| ||||||  |||||||||||||| | | ||||||||||||||||||    
T  8754687 taattaatttataataaagtcaaaaacagttttgttttatggtaataatttccttttatggtatgcttaac 8754617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 47657064 - 47657139
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgcc 81  Q
    ||||||||||||||||| || |||| ||||||  |||||||||||||| ||| ||||||||||||||||| |||||||    
T  47657064 taattaatttataataaagttaaaagcagttt--ttttatggtaataattcccttttatggtatgcttaatcagtgcc 47657139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 5729430 - 5729531
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| |||||||  | ||| ||||||| ||||||| ||  |||||||| ||||||||||||||||  || ||||| |||||||||||    
T  5729430 taattaattgataataaagtcaaaaataattttcttttatagtaataattctcttttatggcatgcttaaccagtgcctcggaggcacaggttagcagga 5729529  T
Q  104 cc 105  Q
    ||    
T  5729530 cc 5729531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 46716722 - 46716839
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||  | |||||||||||| |||||| ||| |||||||||||| |||||| |||| | |  |   |||||||||||||    
T  46716722 taattaatttataataaagtcaaaaatattttccttttatgataataattcccttttatggtatgtttaaccggtgctccgaagatcccggttagcagga 46716821  T
Q  104 ccct-tattaaaattgcc 120  Q
    |||| ||||| |||||||    
T  46716822 ccctgtattataattgcc 46716839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 11686426 - 11686324
Alignment:
Q  4 taattaatttataataatgtcaaaatcag--tttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||| ||||||| |||  |||  |||||||||||||| ||  ||||||| ||||||||||| || ||| || |||||||||||||||    
T  11686426 taattaatttataataaagtcaaaaacagtttttttttttatggtaataattctcttttatgatatgcttaacctgtaccc-ggaggcaccggttagcag 11686328  T
Q  102 gacc 105  Q
    ||||    
T  11686327 gacc 11686324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 38128406 - 38128480
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccctt 108  Q
    ||||||||||||||| || | | |||| | ||||||||||||||||||| || |||||||||||||| |||||||    
T  38128406 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggaggcaccggttagcatgaccctt 38128480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 31954654 - 31954614
Alignment:
Q  310 gatgaatggaagtgctgttctacttgttcaacaagttcaat 350  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  31954654 gatgaattgaagtgctgttctacttgttcaacaagttcaat 31954614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 47118091 - 47118044
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataa 51  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  47118091 taattaatttataataaagtcaagagcagtttccttttatggtaataa 47118044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 27456215 - 27456175
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatg 44  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  27456215 taattaatttataataaagtcaaaagcagtttccttttatg 27456175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 19434608 - 19434682
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccctta 109  Q
    ||||||||||||||| || |   |||| | ||||||||||||||||||| |||||||||||| |||| ||||||||    
T  19434608 ttccttttatggtaagaattttctttttttgtatgcttaaccagtgccc-gggggcaccggtcagcatgaccctta 19434682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 29835806 - 29835735
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttcctttt-atggtaataactccattttatggtatgcttaac 74  Q
    |||||||||| |||||| || |||| ||||||  |||| |||||||||| || |||||||||||||||||||    
T  29835806 taattaatttgtaataaagttaaaaacagttttttttttatggtaataattctattttatggtatgcttaac 29835735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 36786057 - 36786096
Alignment:
Q  69 cttaaccagtgccctgggggcaccggttagcaggaccctt 108  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  36786057 cttaaccagtgccccgggggcaccggttagcagcaccctt 36786096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 31953933 - 31953899
Alignment:
Q  107 ttattaaaattgccttctttgtttttctactattt 141  Q
    |||||||||| ||||||||||||||||||||||||    
T  31953933 ttattaaaatggccttctttgtttttctactattt 31953899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 34556932 - 34556891
Alignment:
Q  64 gtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    |||||||||||||||||||  |||||||||||||||| ||||||    
T  34556932 gtatgcttaaccagtgccc--ggggcaccggttagcatgaccct 34556891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 37631644 - 37631604
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatg 44  Q
    |||||||||||||||||  |||||| |||||||||||||||    
T  37631644 taattaatttataataaaatcaaaaacagtttccttttatg 37631604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 4e-42; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 168550 - 168653
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  168550 taattaatttataataatgtcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccaatgccccgggggcaccggttagcagga 168649  T
Q  104 ccct 107  Q
    ||||    
T  168650 ccct 168653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 27988601 - 27988499
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  27988601 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc-gggggcaccggttagcagga 27988503  T
Q  104 ccct 107  Q
    ||||    
T  27988502 ccct 27988499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 28045903 - 28045801
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  28045903 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc-gggggcaccggttagcagga 28045805  T
Q  104 ccct 107  Q
    ||||    
T  28045804 ccct 28045801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 30675674 - 30675568
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||||    
T  30675674 taattaatttataataatgtcaaaaacagtttccttttatggtaataattcc-ttttatggtatgcttaaccagtgccccggggacaccggttagcagga 30675576  T
Q  104 cccttatt 111  Q
    || |||||    
T  30675575 cctttatt 30675568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 34228766 - 34228868
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  34228766 taattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 34228865  T
Q  104 ccc 106  Q
    |||    
T  34228866 ccc 34228868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 16888646 - 16888544
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||  |||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  16888646 taattaatttataataaagtcaaaaacagtttccttttatggtaataattctcttttgtggtatgcttaaccaatgccccgggggcaccggttagcagga 16888547  T
Q  104 ccc 106  Q
    |||    
T  16888546 ccc 16888544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 4537846 - 4537741
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||  | |||||||||||||||||    
T  4537846 taattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacctgtgccccagaggcaccggttagcagga 4537747  T
Q  104 ccctta 109  Q
    ||||||    
T  4537746 ccctta 4537741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 2805362 - 2805259
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||  |||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||| |||    
T  2805362 taattaacctataataaagtcaaaagcagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcaccggttagccgga 2805263  T
Q  104 ccct 107  Q
    ||||    
T  2805262 ccct 2805259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 11112723 - 11112825
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| |||||||| |||||| ||  ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  11112723 taattaatttataataaagtcaaaaacagttttcttttatgataataattcacttttatggtatgcttaacctgtgccctgggggcactggttagcagga 11112822  T
Q  104 ccc 106  Q
    |||    
T  11112823 ccc 11112825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 16394163 - 16394061
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| ||||||||||||||| |||||| ||  |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  16394163 taattaattgataataaagtcaaaaacagtttccttttatgctaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcagga 16394064  T
Q  104 ccc 106  Q
    |||    
T  16394063 ccc 16394061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 16890582 - 16890482
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| |||||   |||||||||||||||||||    
T  16890582 taattaattgataataaagtcaaaaacagtttccttttatggtaataattcctttttatggtatgcttaaccggtgcctccggggcaccggttagcagga 16890483  T
Q  104 c 104  Q
    |    
T  16890482 c 16890482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 20831657 - 20831553
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||  ||||||||||||||||| |||||| |  ||| |||||||||||||    
T  20831657 tataattaatttataataaagtcaaaagcagtttccttttatggtaataattctcttttatggtatgcttaatcagtgctcccgggacaccggttagcag 20831558  T
Q  102 gaccc 106  Q
    |||||    
T  20831557 gaccc 20831553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 13643096 - 13643202
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||  | || |||||||||||||||| ||  ||||||||||||||||||||||||||| || ||||||||||||||||    
T  13643096 taattaatttataataaagtcaaaaaaaatt-ccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcagga 13643194  T
Q  104 cccttatt 111  Q
    ||||||||    
T  13643195 cccttatt 13643202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 13743521 - 13743627
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||  | || |||||||||||||||| ||  ||||||||||||||||||||||||||| || ||||||||||||||||    
T  13743521 taattaatttataataaagtcaaaaaaaatt-ccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcagga 13743619  T
Q  104 cccttatt 111  Q
    ||||||||    
T  13743620 cccttatt 13743627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 7304620 - 7304518
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||  ||||| ||  |||||||||||||||||||||||| | ||||||||||||||| ||||    
T  7304620 taattaatttataataaagtcaaaaacagtttccttttatgaaaataattctcttttatggtatgcttaaccagtgctccgggggcaccggttagtagga 7304521  T
Q  104 ccc 106  Q
    |||    
T  7304520 ccc 7304518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 4648278 - 4648382
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||||| ||| ||||||| ||||||||||||||  | |||| ||||||||||||| ||    
T  4648278 taattaatttataataatgtcaaaaacagtttcttttgatggtaataattcccttttatgatatgcttaaccagtatcttgggagcaccggttagcatga 4648377  T
Q  104 ccctt 108  Q
    |||||    
T  4648378 ccctt 4648382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 29444242 - 29444138
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||| ||| |||||||||||| |||||||||| || || ||||||| ||| |||||    
T  29444242 taattaatttataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgtttaaccagtgtcccggaggcaccgattaacagga 29444143  T
Q  104 ccctt 108  Q
    |||||    
T  29444142 ccctt 29444138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 21595930 - 21596005
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtg 79  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  21595930 taattaatttataataatgtcaaaaacagtttccttttatggtattaattcccttttatggtatgcttaaccagtg 21596005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 9063153 - 9063051
Alignment:
Q  5 aattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggac 104  Q
    |||||||||||||||| ||||||| || ||| ||||||||||||||| ||| |||| || |||||||||||||||||| ||  |||||||||||||||||    
T  9063153 aattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttgtgatatgcttaaccagtgccccggaagcaccggttagcaggac 9063054  T
Q  105 cct 107  Q
    |||    
T  9063053 cct 9063051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 12203938 - 12204031
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggtta 97  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| ||| |||||||||||||| |||||||| || |||| || ||||||    
T  12203938 taattaatttataataatgtcaaaaacagtttccttttatgataataattcccttttatggtatgctgaaccagtgtcccggggacatcggtta 12204031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 12448366 - 12448459
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggtta 97  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| ||| |||||||||||||| |||||||| || |||| || ||||||    
T  12448366 taattaatttataataatgtcaaaaacagtttccttttatgataataattcccttttatggtatgctgaaccagtgtcccggggacatcggtta 12448459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 39406926 - 39407024
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||| ||| |||||||||||| ||||| |||||||   ||||||||||||||||||    
T  39406926 taattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaactagtgccc--cgggcaccggttagcagga 39407023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 43119299 - 43119402
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||| |||| ||  |||||||||||||||||||| || ||  |||||||||||||||||    
T  43119299 tataattaatttataataaagtcaaaaacagttttcttttatggtgataattctcttttatggtatgcttaaccaatggcc-cggggcaccggttagcag 43119397  T
Q  102 gaccc 106  Q
    |||||    
T  43119398 gaccc 43119402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 33357231 - 33357148
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggg 87  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||  |||||||||||||||||| ||||||| ||||    
T  33357231 taattaatttataataaagtcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaactagtgccccgggg 33357148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 28626854 - 28626950
Alignment:
Q  6 attaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||| ||||||| ||||||| ||||||| |||||| ||| ||||||||||||||||| ||||| || ||| ||||||||||||||||    
T  28626854 attaatttataataaagtcaaaaacagtttctttttatgataataattcccttttatggtatgcttaatcagtgtcc-gggagcaccggttagcagga 28626950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 36730528 - 36730631
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||  |||||| |||||||||||| ||||||  | |||||||||||||  ||    
T  36730528 taattaatttataataaagtcaaaaacagtttccttttatggtaataattctcttttatagtatgcttaacctgtgccc-cgtggcaccggttagccaga 36730626  T
Q  104 ccctt 108  Q
    |||||    
T  36730627 ccctt 36730631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 42035083 - 42034979
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||| ||| ||||||||||||||||||  ||||||  | | ||||||||||| |||    
T  42035083 taattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatgcttaacacgtgccccagagacaccggttagcggga 42034984  T
Q  104 ccctt 108  Q
    |||||    
T  42034983 ccctt 42034979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 9537926 - 9537824
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||  ||||||  |||||| |||||| ||||||| | | ||||||||||||||||||||||| || || | |||||||||||||||    
T  9537926 taattaatttataataaattcaaaaggagtttctttttatagtaataatttccttttatggtatgcttaaccagtgtcccggagacaccggttagcagga 9537827  T
Q  104 ccc 106  Q
    |||    
T  9537826 ccc 9537824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 24843381 - 24843280
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||| ||  ||||||||||||||||| ||||   | ||| ||||||||||||||||    
T  24843381 taattaatttataataaagtcaaaatcagtttccttttatgacaataattctcttttatggtatgcttaatcagtattc-gggagcaccggttagcagga 24843283  T
Q  104 ccc 106  Q
    |||    
T  24843282 ccc 24843280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 3930335 - 3930231
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||| || |||||| | | ||||||| ||||||||||||||||||  || ||| || |||||||||    
T  3930335 taattaattgataataaagtcaaaaacagtttccttttttgataataatttccttttatgatatgcttaaccagtgccccaggagcatcgattagcagga 3930236  T
Q  104 ccctt 108  Q
    |||||    
T  3930235 ccctt 3930231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 9253994 - 9253899
Alignment:
Q  14 ataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggacccttat 110  Q
    ||||||| ||||||| |||||||||||||| ||||||| ||  |||||||||||||||||||| || ||  |||||||||||||||| |||||||||    
T  9253994 ataataaagtcaaaaacagtttccttttatagtaataattctcttttatggtatgcttaaccaatgtcccaggggcaccggttagca-gacccttat 9253899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 32113992 - 32114100
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttcc-ttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagg 102  Q
    ||||||||||||||||| || |||| |||||||| ||||||| |||||| ||| |||||| ||||| ||||||||||| |  | | ||||||||||||||    
T  32113992 taattaatttataataaagtaaaaaacagtttcccttttatgataataattcccttttatagtatgtttaaccagtgctccagagccaccggttagcagg 32114091  T
Q  103 acccttatt 111  Q
    |||||||||    
T  32114092 acccttatt 32114100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 22956789 - 22956895
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactcc--attttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || |||   |||||||||||| ||||  ||||||| |  | ||||||||| |||    
T  22956789 taattaatttataataatgtcaaaaacagtttccttttatggtaaaaattcccttttttatggtatgtttaataagtgccc-gaagacaccggttaacag 22956887  T
Q  102 gaccctta 109  Q
    ||||||||    
T  22956888 gaccctta 22956895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 40831359 - 40831463
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||| ||||||| || ||| ||||||||||||||| |   |||||| |||||| ||| | || |||||| | |||||||||||||    
T  40831359 tataattaatttataataaagtcaaaaacaattttcttttatggtaataattttcttttatagtatgcataatctgtaccctggagacaccggttagcag 40831458  T
Q  102 gaccc 106  Q
    |||||    
T  40831459 gaccc 40831463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 16785170 - 16785253
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggg 87  Q
    ||||||||||||||||| ||||||| ||||||||||||||  |||||| ||  |||||||||||| |||||| |||||| ||||    
T  16785170 taattaatttataataaagtcaaaaacagtttccttttataataataattctcttttatggtatgattaacccgtgcccagggg 16785253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 10870436 - 10870495
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatg 63  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||| ||| |||||||    
T  10870436 taattaatttataataaaatcaaaaacagtttccttttatggtaataattcccttttatg 10870495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 37373289 - 37373360
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaacc 75  Q
    ||||||||| ||||||| ||| ||| |||||| ||||||||||||||| ||| ||| |||||||||||||||    
T  37373289 taattaattgataataaagtcgaaaacagttttcttttatggtaataattccctttcatggtatgcttaacc 37373360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 29235319 - 29235421
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||  ||||||  || ||||||||||| |||||| | | |||||| | |||||||||||||| || |||  |||||||||||| ||    
T  29235319 taattaatttataataaaatcaaaaataggttccttttatgataataatttccttttataggatgcttaaccagtgtcccgggaacaccggttagcatga 29235418  T
Q  104 ccc 106  Q
    |||    
T  29235419 ccc 29235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 42655318 - 42655268
Alignment:
Q  64 gtatgcttaaccagtgccctgggggcaccggttagcaggacccttattaaaa 115  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  42655318 gtatgcttaaccggtgccctgggg-caccggttagcatgacccttattaaaa 42655268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 2490225 - 2490152
Alignment:
Q  38 ttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggacccttatt 111  Q
    ||||||||||| || | | |||| | |||||||||||| |||||  ||||||||||||||||| ||||||||||    
T  2490225 ttttatggtaaaaatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcatgacccttatt 2490152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 42433645 - 42433550
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    |||||||||||||| || ||||||| |||||| ||||||||||||||| | | |||| |||||| ||| |   |||||| || ||||||||||||||    
T  42433645 taattaatttataaaaa-gtcaaaaacagttttcttttatggtaataatttccttttttggtatacttcatttgtgccccggaggcaccggttagca 42433550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 43714260 - 43714184
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggacccttat 110  Q
    ||||||||||||||| || |   |||| | |||||||||||||||||||  ||| |||||||||||| |||||||||    
T  43714260 ttccttttatggtaaaaatttattttttttgtatgcttaaccagtgcccccgggacaccggttagcatgacccttat 43714184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 10618135 - 10618186
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccctt 108  Q
    ||||||||||||||||||| ||| |   ||||||||||||||||||||||||    
T  10618135 ttttatggtatgcttaacccgtgtctccggggcaccggttagcaggaccctt 10618186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 45185052 - 45185091
Alignment:
Q  69 cttaaccagtgccctgggggcaccggttagcaggaccctt 108  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  45185052 cttaaccagtgccccgggggcaccggttagcagcaccctt 45185091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 9934557 - 9934599
Alignment:
Q  64 gtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||| |||||| |||||| |||||||||||||||||||||||    
T  9934557 gtatgtttaacccgtgccccgggggcaccggttagcaggaccc 9934599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 13643054 - 13643018
Alignment:
Q  64 gtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    |||| |||||||||||||| |||||||||||||||||    
T  13643054 gtatccttaaccagtgccccgggggcaccggttagca 13643018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 13743479 - 13743443
Alignment:
Q  64 gtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    |||| |||||||||||||| |||||||||||||||||    
T  13743479 gtatccttaaccagtgccccgggggcaccggttagca 13743443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 18955840 - 18955884
Alignment:
Q  64 gtatgcttaaccagtgccctgggggcaccggttagcaggaccctt 108  Q
    ||||||||||||  ||||| ||||||||||||||||| |||||||    
T  18955840 gtatgcttaacccatgccccgggggcaccggttagcatgaccctt 18955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 4e-42; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 34650935 - 34650832
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  34650935 taattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 34650836  T
Q  104 ccct 107  Q
    ||||    
T  34650835 ccct 34650832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 8787423 - 8787541
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||| |||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  8787423 taattaatttataataatatcaaaaacagtttccttttatgataataattccattttatggtatgcttaacctgtgccccgggggcaccggttagcagga 8787522  T
Q  104 cccttattaaaattgcctt 122  Q
    ||||| ||| |||||||||    
T  8787523 ccctttttataattgcctt 8787541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 11958069 - 11957961
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||  |||||||||||||||||||    
T  11958069 taattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggcatgcttaaccagtgccccaggggcaccggttagcagga 11957970  T
Q  104 cccttatta 112  Q
    |||||||||    
T  11957969 cccttatta 11957961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 329 - 447
Target Start/End: Original strand, 16154682 - 16154798
Alignment:
Q  329 ctacttgttcaacaagttcaatagaacaagatgtatgcatacatttttctacata-ataatgcttgttaatttaatcttgattaatattttgaattcaaa 427  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||| |   || |||||||||||||||| |||||||||||||||||||||||||||    
T  16154682 ctacttgttcaacaagttcaacggaacaagatgtatgcatacattttttt---tacataatgcttgttaattaaatcttgattaatattttgaattcaaa 16154778  T
Q  428 atgattgaggctgctgtatc 447  Q
    ||||| ||||| ||||||||    
T  16154779 atgatcgaggcggctgtatc 16154798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 10054454 - 10054353
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||||| |||||| ||||| ||||||||||||||    
T  10054454 taattaatttataataatgtcaaaa-cagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggtaccggttagcagga 10054356  T
Q  104 ccc 106  Q
    |||    
T  10054355 ccc 10054353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 35504342 - 35504238
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| ||| ||||||||||||||||||| ||| || ||||||||||||||||||||    
T  35504342 taattaatttataataatgtcaaaaacagttcccttttatggcaataattcccttttatggtatgcttaacccgtgtcc-gggggcaccggttagcagga 35504244  T
Q  104 ccctta 109  Q
    ||||||    
T  35504243 ccctta 35504238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 6283646 - 6283742
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  6283646 taattaatttataataaagtcaaaaacaattttcttttatggtaataattcatttttatggtatgcttaaccagtgccctaggggcaccggttagca 6283742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 35132606 - 35132709
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| |||| |||||||||| ||  |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  35132606 taattaatttataataaagtcaaaaacagttttcttt-atggtaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcagga 35132704  T
Q  104 ccctt 108  Q
    |||||    
T  35132705 ccctt 35132709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 13661892 - 13661995
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| |||| || |||||||||||||||||||||| ||  ||||||||||||||||||| |||||| || |||||||||||||||||    
T  13661892 taattaattgataataaagtcagaaacagtttccttttatggtaataattctcttttatggtatgcttaacccgtgccccggaggcaccggttagcagga 13661991  T
Q  104 ccct 107  Q
    ||||    
T  13661992 ccct 13661995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 41046059 - 41046128
Alignment:
Q  378 tacataataatgcttgttaatttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 447  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41046059 tacataataattcttgttaatttaatcttgattaatattttgaattcaaaatgattgaggttgctgtatc 41046128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 11846156 - 11846259
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| ||| |||||| |||||||||||||||||||   |||||  |||||||||||    
T  11846156 taattaatttataataaagtcaaaagtagtttccttttatggtaataaatcccttttatagtatgcttaaccagtgcccctagggcatgggttagcagga 11846255  T
Q  104 ccct 107  Q
    ||||    
T  11846256 ccct 11846259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 12506380 - 12506458
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccc 82  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||| ||  |||||||| |||||||||||||||||    
T  12506380 taattaatttataataatgtcaaaaacagtttccttttatagtaataattctcttttatggaatgcttaaccagtgccc 12506458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 40564506 - 40564402
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || |||  |||||||||||||| ||  |||||||||||||||||||| | |||   ||||||||||||||||||    
T  40564506 taattaatttataataaagtcaaaaacaatttttttttatggtaataattctcttttatggtatgcttaaccaataccccaagggcaccggttagcagga 40564407  T
Q  104 ccctt 108  Q
    |||||    
T  40564406 ccctt 40564402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 21547496 - 21547394
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||| ||||| | |||||| ||   ||||||||||||||||||||| ||| || | |||||||||||||||    
T  21547496 taattaatttataataaagtcaaaaacagtttcattttaagttaataattctcatttatggtatgcttaaccagtaccccggagacaccggttagcagga 21547397  T
Q  104 ccc 106  Q
    |||    
T  21547396 ccc 21547394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 40057389 - 40057493
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    |||||||||||||||||||  |||||| |||||| ||||||| ||||||  ||| ||||||| | || |||||||||| ||| | |||||||||||||||    
T  40057389 tataattaatttataataaaatcaaaagcagttttcttttatagtaatatttcccttttatgatgtgtttaaccagtgacctcgaggcaccggttagcag 40057488  T
Q  102 gaccc 106  Q
    |||||    
T  40057489 gaccc 40057493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 10956035 - 10956140
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||| || ||||||| || ||||||||||||||||||| | | ||||||| |||||||||||||| ||| |   | ||||||||||| ||    
T  10956035 taattaatttataacaaagtcaaaaacaatttccttttatggtaataatttccttttatgatatgcttaaccagtaccccgaatgtaccggttagcaaga 10956134  T
Q  104 ccctta 109  Q
    ||||||    
T  10956135 ccctta 10956140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 31082214 - 31082169
Alignment:
Q  378 tacataataatgcttgttaatttaatcttgattaatattttgaatt 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31082214 tacataataatgcttgttaatttaatcttgattaatattttgaatt 31082169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 9721709 - 9721640
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaa 73  Q
    ||||||||||||||||| ||||||| |||||| |||||||| |||||| ||| |||||||||||| ||||    
T  9721709 taattaatttataataaagtcaaaaacagttttcttttatgataataattcccttttatggtatgtttaa 9721640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 13470233 - 13470282
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataa 51  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  13470233 tataattaatttataataaagtcaaaaacagtttccttttatggtaataa 13470282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 4268646 - 4268749
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||| ||  | |||| |||||||||||||||||||||| |   |||| |||||||||||||| ||| || ||||||||||||||| | ||    
T  4268646 taattaatttataaaaaa-taaaaaacagtttccttttatggtaataattttcttttttggtatgcttaacccgtgtccagggggcaccggttagtatga 4268744  T
Q  104 ccctt 108  Q
    |||||    
T  4268745 ccctt 4268749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 20175311 - 20175406
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||| ||||||| || ||| |||||||| |||||| ||| ||||||  |||||||||| ||||| || ||| ||||||||||||    
T  20175311 taattaatttataataaagtcaaaaacaattttcttttatgataataattcccttttataatatgcttaactagtgctct-gggacaccggttagca 20175406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 19647726 - 19647677
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  19647726 ttttatggtatgcttaacccgtgccccgggggcaccggttagccggaccc 19647677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 22799194 - 22799154
Alignment:
Q  310 gatgaatggaagtgctgttctacttgttcaacaagttcaat 350  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  22799194 gatgaattgaagtgctgttctacttgttcaacaagttcaat 22799154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 350
Target Start/End: Complemental strand, 31082268 - 31082229
Alignment:
Q  311 atgaatggaagtgctgttctacttgttcaacaagttcaat 350  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  31082268 atgaattgaagtgctgttctacttgttcaacaagttcaat 31082229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 31467834 - 31467906
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||||||||||| || | | |||| | |||||||||||||||||||  ||| |||||||||||| |||||    
T  31467834 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccagggacaccggttagcaagaccc 31467906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 39067037 - 39066973
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatg 68  Q
    ||||||||||||||||| ||||||| || | ||||||||||||||||| ||  ||||||| ||||    
T  39067037 taattaatttataataaagtcaaaaacaatatccttttatggtaataattctcttttatgttatg 39066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 8927593 - 8927554
Alignment:
Q  69 cttaaccagtgccctgggggcaccggttagcaggaccctt 108  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  8927593 cttaaccagtgccccaggggcaccggttagcaggaccctt 8927554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 10070086 - 10070137
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccctt 108  Q
    |||||||||||||||||||| || ||  || |||||||||||||||||||||    
T  10070086 ttttatggtatgcttaaccaatgtcccaggagcaccggttagcaggaccctt 10070137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 407
Target Start/End: Complemental strand, 22799142 - 22799107
Alignment:
Q  372 tttttctacataataatgcttgttaatttaatcttg 407  Q
    ||||| ||||||||||||||||||||||||||||||    
T  22799142 tttttttacataataatgcttgttaatttaatcttg 22799107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 14214121 - 14214055
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||| || | | |||| | |||||||||||| ||| || |||||||||||||||||    
T  14214121 ttccttttatggtaagaatttcctttttttgtatgcttaaccggtgtcccgggggcaccggttagca 14214055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 19647762 - 19647717
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggta 47  Q
    ||||||||||| ||||||| |||| || ||||||||||||||||||    
T  19647762 tataattaattgataataaagtcataaacagtttccttttatggta 19647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 10956009 - 10955957
Alignment:
Q  48 ataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    |||| ||| |||||||||||||||||||||||||| || |||| | |||||||    
T  10956009 ataattcccttttatggtatgcttaaccagtgccccggaggcaacagttagca 10955957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 248
Target Start/End: Complemental strand, 31082310 - 31082282
Alignment:
Q  220 tattgaggacatggaattcataacaacaa 248  Q
    |||||||||||||||||||||||||||||    
T  31082310 tattgaggacatggaattcataacaacaa 31082282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 6e-41; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 4381879 - 4381984
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  4381879 taattaatttataataatgtcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgccccgggagcactggttagcagga 4381978  T
Q  104 ccctta 109  Q
    ||||||    
T  4381979 ccctta 4381984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 20553015 - 20553122
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  20553015 taattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 20553114  T
Q  104 cccttatt 111  Q
    ||||||||    
T  20553115 cccttatt 20553122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 308 - 439
Target Start/End: Complemental strand, 23501959 - 23501833
Alignment:
Q  308 ctgatgaatggaagtgctgttctacttgttcaacaagttcaatagaacaagatgtatgcatacatttttctacataataatgcttgttaatttaatcttg 407  Q
    ||||||||| | |||| |||| ||||||||| |||||||||||||||||   |||||||||||||||||  |||||||||||||||||||||||||||||    
T  23501959 ctgatgaattgtagtgttgttatacttgttcgacaagttcaatagaaca---tgtatgcatacattttt--acataataatgcttgttaatttaatcttg 23501865  T
Q  408 attaatattttgaattcaaaatgattgaggct 439  Q
    |||||||||||||||| |||||||||||||||    
T  23501864 attaatattttgaattaaaaatgattgaggct 23501833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 27856498 - 27856385
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  27856498 taattaatttataataatgtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcagga 27856399  T
Q  104 cccttattaaaatt 117  Q
    ||||| ||| ||||    
T  27856398 cccttcttataatt 27856385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 31438730 - 31438837
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||||    
T  31438730 taattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaaccagtgccccggggacaccggttagcagga 31438829  T
Q  104 cccttatt 111  Q
    ||||||||    
T  31438830 cccttatt 31438837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 22068424 - 22068319
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  22068424 tataattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccgattagcag 22068325  T
Q  102 gaccct 107  Q
    ||||||    
T  22068324 gaccct 22068319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32360974 - 32360869
Alignment:
Q  1 atataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  32360974 atataattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccaatgccccgggggcaccggttagca 32360875  T
Q  101 ggaccc 106  Q
    ||||||    
T  32360874 ggaccc 32360869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 30486294 - 30486396
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||  |||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  30486294 taattaaactataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 30486393  T
Q  104 ccc 106  Q
    |||    
T  30486394 ccc 30486396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 6580273 - 6580372
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||   ||||||||||||    
T  6580273 taattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggggg---cggttagcagga 6580369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 34442634 - 34442531
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  34442634 taattaatttataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaaccagtgccc-gggggcatcggttagcagga 34442536  T
Q  104 ccctt 108  Q
    |||||    
T  34442535 ccctt 34442531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 26387166 - 26387063
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  26387166 taattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatgcttaaccagtgccttgggggcaccggttaacagga 26387067  T
Q  104 ccct 107  Q
    ||||    
T  26387066 ccct 26387063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 31390096 - 31390198
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| |||| | |||||||||| |||||||||    
T  31390096 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacccgtgctccgggggcaccgattagcagga 31390195  T
Q  104 ccc 106  Q
    |||    
T  31390196 ccc 31390198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 44587986 - 44588088
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||| ||| |||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  44587986 taattaatttataataaagtaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacaagtgccccgggggtaccggttagcagga 44588085  T
Q  104 ccc 106  Q
    |||    
T  44588086 ccc 44588088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 3668215 - 3668110
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| | | |||||| ||||| ||||||||||||| | ||||||||||||||| ||    
T  3668215 taattaatttataataatgtcaaaaacagtttccttttatggtaataatttccttttatagtatgtttaaccagtgccccgagggcaccggttagcaaga 3668116  T
Q  104 ccctta 109  Q
    ||||||    
T  3668115 ccctta 3668110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 28601048 - 28601154
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||| ||||||| || |||| ||||||| |||||||||||||| ||  |||||||||||||||||||||||| ||||| ||||||||||||||    
T  28601048 tataattaattgataataaagttaaaaacagtttctttttatggtaataattctcttttatggtatgcttaaccagtgcactgggagcaccggttagcag 28601147  T
Q  102 gaccctt 108  Q
    |||||||    
T  28601148 gaccctt 28601154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 8969509 - 8969405
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| | | |||||| ||||||||||| |||||||  ||||||||||||||||| |    
T  8969509 taattaatttataataaagtcaaaagcagtttccttttatggtaataatttccttttatagtatgcttaactagtgcccctggggcaccggttagcagta 8969410  T
Q  104 ccctt 108  Q
    |||||    
T  8969409 ccctt 8969405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 22887834 - 22887936
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||| ||  |||||||||||||||||||||||| | |||||||||| |||||| ||    
T  22887834 taattaatttataataaagttaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgctccgggggcaccgattagcatga 22887933  T
Q  104 ccc 106  Q
    |||    
T  22887934 ccc 22887936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 561620 - 561515
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||| ||  ||||||||||||||||| |||| ||| || |||||||||||||||||    
T  561620 taattaatttataataaagtcaaaatcagtttccttttataataataattctcttttatggtatgcttaatcagtaccccggaggcaccggttagcagga 561521  T
Q  104 ccctta 109  Q
    | ||||    
T  561520 ctctta 561515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 22567686 - 22567791
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||  | ||||||||||||||||||| ||  ||||||||||||||||||| |||| |  |||||||||||||||||||    
T  22567686 taattaatttataataaagtcaaaaataatttccttttatggtaataattctcttttatggtatgcttaacccgtgctccaggggcaccggttagcagga 22567785  T
Q  104 ccctta 109  Q
    ||||||    
T  22567786 ccctta 22567791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 1859246 - 1859342
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||| ||  ||||||||||||||||||||||||||| ||  ||||||||||||    
T  1859246 taattaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaaccagtgccctaggaacaccggttagca 1859342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 35851853 - 35851749
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgcc-ctgggggcaccggttagcagg 102  Q
    ||||||||| ||||||| ||||||| ||||||| |||||||||||||| ||  |||||||||||||||||||| |||| | |||||||||||||||||||    
T  35851853 taattaattgataataaagtcaaaaacagtttcattttatggtaataattctcttttatggtatgcttaaccaatgcctcggggggcaccggttagcagg 35851754  T
Q  103 accct 107  Q
    |||||    
T  35851753 accct 35851749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 4022581 - 4022480
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||| || ||||||||||||||| |||||| | | ||||||| |||| |||||||||| || ||||||||||||||||||||    
T  4022581 taattaatttataataaagtcagaaacagtttccttttatgataataatttccttttatgatatgtttaaccagtgtcccgggggcaccggttagcagga 4022482  T
Q  104 cc 105  Q
    ||    
T  4022481 cc 4022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 13574131 - 13574031
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||||| | | ||||||||||||||||||| |||||||   | |||||||||||||||    
T  13574131 taattaatttataataaagtcaaaaacagtttctttttatggtaataatttccttttatggtatgcttaacccgtgccct-aagacaccggttagcagga 13574033  T
Q  104 cc 105  Q
    ||    
T  13574032 cc 13574031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 5093641 - 5093538
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || |||||||||||| |||||| | | |||||||||||| ||||| |||||||  ||||||||||||| |||||    
T  5093641 taattaatttataataaagtcaaaagcaatttccttttatgataataatttccttttatggtatgtttaactagtgccc-cggggcaccggttaacagga 5093543  T
Q  104 ccctt 108  Q
    |||||    
T  5093542 ccctt 5093538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 32860186 - 32860289
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| ||  ||||||||||||||||||||||| || |||| || | |||| |||||    
T  32860186 taattaatttataataaagtcaaaaacagtttccttttat-gtaataattctcttttatggtatgcttaaccagtgtcccggggacagctgttaacagga 32860284  T
Q  104 ccctt 108  Q
    |||||    
T  32860285 ccctt 32860289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 25782935 - 25782831
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||| |||||||||| ||||||| || ||| |||||||| |||||| ||| ||||||||||||||||||||||| || |||| || |||||||| | |    
T  25782935 taattattttataataaagtcaaaaacaattttcttttatgataataattcccttttatggtatgcttaaccagtgtcccggggacatcggttagccgaa 25782836  T
Q  104 ccctt 108  Q
    |||||    
T  25782835 ccctt 25782831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 38590976 - 38590904
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaacca 76  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  38590976 taattaattgataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaacca 38590904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 2898155 - 2898265
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| ||| |||  |||||| ||  |||||||||||| |||| ||||| || || |||||||||||||||||    
T  2898155 taattaatttataataaagtcaaaaacagttttcttctatcataataattctcttttatggtatgtttaatcagtgtcccggaggcaccggttagcagga 2898254  T
Q  104 cccttattaaa 114  Q
    || | ||||||    
T  2898255 ccataattaaa 2898265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 27584822 - 27584922
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||| ||   || ||||||| |||||||||||||| ||  ||| ||||||||||||    
T  27584822 taattaatttataataaaatcaaaagcagtttccttttatggtaataattctcattcatggtatacttaaccagtgccc-ggaagcagcggttagcagga 27584920  T
Q  104 cc 105  Q
    ||    
T  27584921 cc 27584922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 11021324 - 11021259
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgc 69  Q
    |||||||| |||||||| ||||||| |||||| ||||| ||||||||| ||| |||||||||||||    
T  11021324 taattaatatataataaagtcaaaaacagttttcttttgtggtaataattcccttttatggtatgc 11021259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 43637248 - 43637343
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||||| ||||||| || |||| |||||||||||||| | | |||||  ||||| |||||| |||| |  ||||||||||||||||    
T  43637248 taattaatttataataaagtcaaaaacaatttctttttatggtaataatttccttttacagtatgtttaacccgtgctc-cggggcaccggttagca 43637343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 38296261 - 38296308
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataa 51  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  38296261 taattaatttataataaagtcaaaaacagtttctttttatggtaataa 38296308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 25772195 - 25772269
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagt 78  Q
    ||||||||||||||||| |||||||  | ||||| |||||| |||||| ||| ||||||||||| ||||| ||||    
T  25772195 taattaatttataataaagtcaaaaataatttccctttatgataataattcccttttatggtatacttaatcagt 25772269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 29102387 - 29102313
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaacca 76  Q
    ||||||||||||||||||| ||||||| |||||| ||||||| ||||||| |   ||||||| |||| |||||||    
T  29102387 tataattaatttataataaagtcaaaaacagttttcttttatagtaataattatcttttatgatatgtttaacca 29102313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 5881305 - 5881374
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaa 73  Q
    ||||||||| ||||||| |||||||  |||||||||||||| |||||| |   |||||||||||||||||    
T  5881305 taattaattgataataaagtcaaaaagagtttccttttatgataataattatcttttatggtatgcttaa 5881374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 26891731 - 26891683
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  26891731 ttttatggtatgcttaactagtgtc-tgggggcaccggttagcaggaccc 26891683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 45262024 - 45262096
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    |||||||||||||||||| | | |||| | ||||||||||||  || || ||||||||||||||||| |||||    
T  45262024 ttccttttatggtaataatttcttttttttgtatgcttaacctttgtcccgggggcaccggttagcatgaccc 45262096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 26891765 - 26891722
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggta 47  Q
    ||||||||||||||||| |||||||  |||||||||||||||||    
T  26891765 taattaatttataataaagtcaaaaatagtttccttttatggta 26891722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 19037002 - 19036960
Alignment:
Q  69 cttaaccagtgccctgggggcaccggttagcaggacccttatt 111  Q
    ||||||| |||||| |||||||||||||||||| |||||||||    
T  19037002 cttaacccgtgccccgggggcaccggttagcagcacccttatt 19036960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 32479441 - 32479404
Alignment:
Q  69 cttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  32479441 cttaaccagtgccctggaggcaccggttagcagcaccc 32479404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 31782633 - 31782565
Alignment:
Q  38 ttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||||||| || | | |||| | |||||||||||| |||||  ||||||||||||||||| |||||    
T  31782633 ttttatggtaaaaatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcatgaccc 31782565  T

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Target: chr1 (Bit Score: 86; Significance: 6e-41; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 18043246 - 18043351
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18043246 taattaatttataataatgtcaaaaacagttttcttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcagga 18043345  T
Q  104 ccctta 109  Q
    ||||||    
T  18043346 ccctta 18043351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 29657853 - 29657960
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||| ||||||| ||||||| |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29657853 tataattaattgataataaagtcaaaaacagtttccttttttggtaataattcccttttatggtatgcttaaccagtgccctgggggcaccggttagcag 29657952  T
Q  102 gaccctta 109  Q
    ||||||||    
T  29657953 gaccctta 29657960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 38162934 - 38163035
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  38162934 taattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccccgggggcaccggttagcagga 38163033  T
Q  104 cc 105  Q
    ||    
T  38163034 cc 38163035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 42770092 - 42769987
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||| |    
T  42770092 taattaatttataataatatcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcagaa 42769993  T
Q  104 ccctta 109  Q
    ||||||    
T  42769992 ccctta 42769987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 51065850 - 51065745
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  51065850 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcagga 51065751  T
Q  104 ccctta 109  Q
    ||||||    
T  51065750 ccctta 51065745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 5694405 - 5694512
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||    
T  5694405 taattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgctccgggggcaccggttagcagga 5694504  T
Q  104 cccttatt 111  Q
    ||||||||    
T  5694505 cccttatt 5694512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 15227823 - 15227929
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| || |||||||||||||| ||    
T  15227823 taattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcaccggttagcaaga 15227922  T
Q  104 cccttat 110  Q
    |||||||    
T  15227923 cccttat 15227929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 24178565 - 24178463
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| |||    
T  24178565 taattaatctataataaagtcaaaagcagtttccttttatggtaataatttcattttatggtatgcttaaccagtgccccgggggcaccggttagccgga 24178466  T
Q  104 ccc 106  Q
    |||    
T  24178465 ccc 24178463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 12072164 - 12072061
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||| |    
T  12072164 taattaattgataataaagtcaaaaacagttttcttttatggtaataattcctttttatggtatgcttaaccagtgccccgggggcaccggttagcagca 12072065  T
Q  104 ccct 107  Q
    ||||    
T  12072064 ccct 12072061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 30294483 - 30294381
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||| |||| | |||| |||||||||||||||    
T  30294483 taattaatttataataatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgcttaacctgtgctccggggacaccggttagcagga 30294384  T
Q  104 ccc 106  Q
    |||    
T  30294383 ccc 30294381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 47010077 - 47010181
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||| |  |||||||||||||||||||    
T  47010077 taattaatttataataaattcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgctccaggggcaccggttagcagga 47010176  T
Q  104 ccctt 108  Q
    |||||    
T  47010177 ccctt 47010181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 38702035 - 38701935
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||    |||||||||||||||||||||||| | ||||||||||||||||||    
T  38702035 taattaatttataataatgtcaaaaacagttttcttttatggtaataattc----ttatggtatgcttaaccagtgccccgagggcaccggttagcagga 38701940  T
Q  104 ccctt 108  Q
    |||||    
T  38701939 ccctt 38701935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 372 - 447
Target Start/End: Complemental strand, 50271174 - 50271099
Alignment:
Q  372 tttttctacataataatgcttgttaatttaatcttgattaatattttgaattcaaaatgattgaggctgctgtatc 447  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50271174 tttttttacataataatgcttgttaatttaatcttgattaatattttgaattcaaaatgattgaggttgctgtatc 50271099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 14350379 - 14350277
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| |||  || ||||||||||||||||||||||  |||||||||||||||||||    
T  14350379 taattaatttataataatgtcaaaaacaatttccttttatggtaataattcc-cttaatggtatgcttaaccagtgccc-cggggcaccggttagcagga 14350282  T
Q  104 ccctt 108  Q
    |||||    
T  14350281 ccctt 14350277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 45449346 - 45449238
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||| | | |||||||||||| |||||||||||||  |||||| ||||||||||||    
T  45449346 taattaaattataataaagtcaaaagcagtttccttttatggtaataattgccttttatggtatgtttaaccagtgccccaggggcatcggttagcagga 45449247  T
Q  104 cccttatta 112  Q
    |||| ||||    
T  45449246 ccctaatta 45449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 48383213 - 48383111
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||   ||||||| |||||||||||    
T  48383213 taattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccaatgcctcaggggcactggttagcagga 48383114  T
Q  104 ccc 106  Q
    |||    
T  48383113 ccc 48383111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 3097743 - 3097846
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||| | | |||||||||||||||||||||| |   |||| |||||||||||||||    
T  3097743 taattaatttataataaagtcaaaaacagttttcttttatggtaataatttccttttatggtatgcttaaccagtac---ggggacaccggttagcagga 3097839  T
Q  104 cccttat 110  Q
    |||||||    
T  3097840 cccttat 3097846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 19031917 - 19031814
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| | | ||||||| ||||||||||| || ||| || | |||||||||||||||    
T  19031917 taattaatttataataaagtcaaaaacagtttccttttatggtaataatttccttttatgatatgcttaacccgtaccccggagacaccggttagcagga 19031818  T
Q  104 ccct 107  Q
    ||||    
T  19031817 ccct 19031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 41730392 - 41730494
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||| ||| |||||||||||||||||| |||||||  |  |||| |||||||||||    
T  41730392 taattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaacaagtgccccagaagcactggttagcagga 41730491  T
Q  104 ccc 106  Q
    |||    
T  41730492 ccc 41730494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 51368884 - 51368810
Alignment:
Q  7 ttaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgcc 81  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  51368884 ttaatttataataatgtcaaaaatagtttccttttatagtaataattccattttatggtatgcttaaccagtgcc 51368810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 43286806 - 43286913
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccct--gggggcaccggttagcag 101  Q
    ||||||||||||||||| |||||||  ||||||||||||| ||||||| ||  |||||||||||||||||||||||  ||  ||||||| ||||||||||    
T  43286806 taattaatttataataaagtcaaaaatagtttccttttatagtaataattctcttttatggtatgcttaaccagtgtgcttcgggggcatcggttagcag 43286905  T
Q  102 gaccctta 109  Q
    ||||||||    
T  43286906 gaccctta 43286913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 3784815 - 3784712
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| || ||| ||||||||||||||| | | ||||||||||||||||||| ||| || |||||||||||||||| |||    
T  3784815 taattaattgataataaagtcaaaaacaattttcttttatggtaataatttccttttatggtatgcttaacccgtgtcccgggggcaccggttagccgga 3784716  T
Q  104 ccct 107  Q
    ||||    
T  3784715 ccct 3784712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 17333384 - 17333276
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| ||||||||||||||| |||||  ||| ||||||||||  |||||||| ||||| || |||||||||||||||||    
T  17333384 taattaattcataataaagtcaaaaacagtttccttttatgataatacttcccttttatggta--cttaaccaatgccccggaggcaccggttagcagga 17333287  T
Q  104 cccttattaaa 114  Q
    ||||| |||||    
T  17333286 ccctttttaaa 17333276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 9266830 - 9266728
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||  ||||||||||| |||||||||||| |  |  ||||||||||||||||    
T  9266830 taattaattcataataaagtcaaaaacagtttccttttatggtaataattcgcttttatggtatacttaaccagtgctccagaagcaccggttagcagga 9266731  T
Q  104 ccc 106  Q
    |||    
T  9266730 ccc 9266728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 13961295 - 13961396
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| ||||||| ||||||| |||||||||||||| |   |||||||||||||||||||||||| |   ||||||||||||||||||    
T  13961295 taattaattgataataaagtcaaaaacagtttcattttatggtaataattttcttttatggtatgcttaaccagtgctccaagggcaccggttagcagga 13961394  T
Q  104 cc 105  Q
    ||    
T  13961395 cc 13961396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 50128274 - 50128169
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| || |||| ||||||| |||||||||||||| ||  ||||||||||||||||||||||| ||  |   |||||||||||||||    
T  50128274 taattaatttataataaagttaaaagcagtttcattttatggtaataattctcttttatggtatgcttaaccagtgtcccagaaacaccggttagcagga 50128175  T
Q  104 ccctta 109  Q
    ||||||    
T  50128174 ccctta 50128169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 12307001 - 12307077
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgc 80  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  12307001 taattaatttataataaagtcaaaaacagattccttttatggtaataattctcttttatggtatgcttaaccagtgc 12307077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 36446427 - 36446352
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtg 79  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| ||| |||||||||||| ||||||||||    
T  36446427 taattaatttataataaagtcaaaaacagtttccttttatagtaataattcccttttatggtatgtttaaccagtg 36446352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 23473568 - 23473458
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcag 101  Q
    ||||||||||||||||||| ||  ||| |||||||||||||||||||||| | | ||||||  ||||||||||| |||| | | ||| ||||||||||||    
T  23473568 tataattaatttataataaagtttaaagcagtttccttttatggtaataatttctttttataatatgcttaacctgtgctccgagggtaccggttagcag 23473469  T
Q  102 gacccttatta 112  Q
    ||||| |||||    
T  23473468 gacccatatta 23473458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 8473016 - 8472911
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||| ||||||  |||||| ||  ||||||||||| ||||||||||| || | ||  ||||||||||||||    
T  8473016 taattaatttataataaagtcaaaaacagtttcattttataataataattctcttttatggtatacttaaccagtgtcccgaggataccggttagcagga 8472917  T
Q  104 ccctta 109  Q
    ||||||    
T  8472916 ccctta 8472911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 29683278 - 29683355
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtg 79  Q
    ||||||||||||||||||| ||||||| ||||||| |||||| ||||||| ||  |||||||||||||||||||||||    
T  29683278 tataattaatttataataaagtcaaaaacagtttcattttatagtaataattcacttttatggtatgcttaaccagtg 29683355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 45431362 - 45431466
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| ||  ||||||| ||| ||||||||||||||  | | | ||||||| |||||    
T  45431362 taattaatttataataaagtcaaaaatagtttccttttatggtaataattctcttttatgatatacttaaccagtgccccagagactccggttatcagga 45431461  T
Q  104 ccctt 108  Q
    |||||    
T  45431462 ccctt 45431466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 6770421 - 6770529
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| |||||| ||| ||||||| ||||||||||||||  ||     ||||||||||||||||    
T  6770421 taattaatttataataaagtcaaaaacagtttcattttatgataataattcccttttatgatatgcttaaccagtatcc----cgcaccggttagcagga 6770516  T
Q  104 cccttattaaaat 116  Q
    |||| ||| ||||    
T  6770517 ccctaatttaaat 6770529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 19010778 - 19010687
Alignment:
Q  15 taataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    |||||| |||||||  ||||||||||||||||||||| ||| |||||||||||| |||||||||||||  ||  |||||||||| |||||||    
T  19010778 taataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgattaaccagtgccccaggaacaccggttagtaggaccc 19010687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 29210531 - 29210581
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29210531 ttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 29210581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 30217846 - 30217946
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||  ||||| ||||||||||||||| | | ||||||||||||||||| ||||||||  | |||||| ||||||||||    
T  30217846 taattaatttataataaagtcaaaaatagttttcttttatggtaataatttctttttatggtatgcttaa-cagtgccc-cgaggcacctgttagcagga 30217943  T
Q  104 ccc 106  Q
    |||    
T  30217944 ccc 30217946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 35985723 - 35985645
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccc 82  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||| |||  ||||| |||| ||||||||||||||    
T  35985723 taattaatttataataaagtgaaaaacagtttccttttatggtaataattcccatttatagtatacttaaccagtgccc 35985645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 30657692 - 30657798
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||      ||| |||||| ||| |||||||||||||||||||||| ||| || ||||||| |||||||||    
T  30657692 taattaatttataataaagtcaaaaacagttt------atgataataattcccttttatggtatgcttaaccagtaccccggaggcaccgattagcagga 30657785  T
Q  104 cccttattaaaat 116  Q
    ||| || ||||||    
T  30657786 cccataataaaat 30657798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 52431665 - 52431761
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataact-ccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    |||||||||||||| |||||||||| || ||| ||||||||||||||| | || |||| |||||||||||||||||||||  ||| ||||||||||||    
T  52431665 taattaatttataa-aatgtcaaaagcaattttcttttatggtaataatttcctttttttggtatgcttaaccagtgccccagggacaccggttagca 52431761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 48071566 - 48071642
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgc 80  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| |   |||||| |||||||||||| ||||    
T  48071566 taattaatttataataaagtcaaaaacagtttccttttatggtaataattatcttttatagtatgcttaaccggtgc 48071642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 14881083 - 14881036
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaat 49  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  14881083 tataattaatttataataaagtcaaaaacagtttccttttatggtaat 14881036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 29210497 - 29210540
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggta 47  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  29210497 taattaatttataataatgtcaaaaacagtttccttttatggta 29210540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 21112730 - 21112680
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  21112730 ttttatggtatgcttaactagtgccccgagggcaccggttagcaggaccct 21112680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 28725977 - 28725905
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||||||||||| || | | |||| | ||||||||||||||||||| |||| |||||||||||| |||||    
T  28725977 ttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccggggacaccggttagcaagaccc 28725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 38335253 - 38335317
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatg 68  Q
    ||||||||||||||||| ||||||| |||||| |||||||| |||||| ||  ||||||||||||    
T  38335253 taattaatttataataaagtcaaaaacagttttcttttatgataataattcacttttatggtatg 38335317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 47532763 - 47532671
Alignment:
Q  14 ataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||| |||||||  | |||||||||||  |||||| ||| |||||||||||||||||||| ||||| |  | |||||||||||| |||||    
T  47532763 ataataaagtcaaaaataatttccttttataataataattcccttttatggtatgcttaaccaatgccccgaagacaccggttagcaagaccc 47532671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 21117472 - 21117422
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    ||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  21117472 ttttatggtatgcttaacttgtgccccgagggcaccggttagcaggaccct 21117422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 30664239 - 30664173
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagca 100  Q
    ||||||||||||||| || | | |||| | ||||||||||||||||||| | |||||||||||||||    
T  30664239 ttccttttatggtaagaatttcttttttttgtatgcttaaccagtgccccgtgggcaccggttagca 30664173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 50271240 - 50271200
Alignment:
Q  310 gatgaatggaagtgctgttctacttgttcaacaagttcaat 350  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  50271240 gatgaattgaagtgttgttctacttgttcaacaagttcaat 50271200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 26228300 - 26228367
Alignment:
Q  42 atggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccctta 109  Q
    |||||||||| ||| ||||||||||||||||||  || | | |||| |||||||||||| ||||||||    
T  26228300 atggtaataattcccttttatggtatgcttaactggtactccggggacaccggttagcatgaccctta 26228367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 23822565 - 23822523
Alignment:
Q  64 gtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||    
T  23822565 gtatgcttaaccaatgccccgggggcaccggttagcatgaccc 23822523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 34540331 - 34540289
Alignment:
Q  70 ttaaccagtgccctgggggcaccggttagcaggacccttatta 112  Q
    |||||||||||| ||||||||||||||||||  ||||||||||    
T  34540331 ttaaccagtgccatgggggcaccggttagcaacacccttatta 34540289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 10679629 - 10679702
Alignment:
Q  34 ttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    ||||||||||||||| || | | |||| | |||||||||||  ||| || ||||||||||||||||| ||||||    
T  10679629 ttccttttatggtaaaaatttcttttttttgtatgcttaacaggtgtcccgggggcaccggttagcatgaccct 10679702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 11797045 - 11796969
Alignment:
Q  31 agtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccctt 108  Q
    |||||| |||||||||||||||| | |||| |||||| |||||| |||||||   || |||||||||||| |||||||    
T  11797045 agtttcgttttatggtaataacttccttttttggtatccttaactagtgccc-caggacaccggttagcatgaccctt 11796969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 38595792 - 38595752
Alignment:
Q  66 atgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||||||||||||| || |||||||||||||| |||||    
T  38595792 atgcttaaccagtgccccggaggcaccggttagcatgaccc 38595752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 248
Target Start/End: Complemental strand, 50271281 - 50271253
Alignment:
Q  220 tattgaggacatggaattcataacaacaa 248  Q
    |||||||||||||||||||||||||||||    
T  50271281 tattgaggacatggaattcataacaacaa 50271253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 10794 - 10896
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  10794 taattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaaccagtgcctcgggggcagcggttagcagga 10893  T
Q  104 ccc 106  Q
    |||    
T  10894 ccc 10896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 14983 - 15088
Alignment:
Q  7 ttaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||| ||||| ||||||||    
T  14983 ttaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcactggttaacaggaccc 15082  T
Q  107 ttatta 112  Q
     |||||    
T  15083 atatta 15088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 6212 - 6107
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||  || |||||||||||| |||||| |||||| ||||||||||||||||||||    
T  6212 taattaaattataataaagtcaaaaacagtttccttttatggtaataatccccttttatggtatgtttaacccgtgccccgggggcaccggttagcagga 6113  T
Q  104 ccctta 109  Q
    ||||||    
T  6112 ccctta 6107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 53787 - 53683
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||| ||| |||||||||||| |||||| || ||| ||||||||||||||||| ||    
T  53787 taattaatttatcataatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaaga 53688  T
Q  104 ccctt 108  Q
    |||||    
T  53687 ccctt 53683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 909 - 1014
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||| ||  |||||||||||||||||||||||||||  || |||||||||||  ||    
T  909 taattaatttataataaagtcaaaatcaatttccttttatagtaataattctcttttatggtatgcttaaccagtgccctaaggacaccggttagccaga 1008  T
Q  104 ccctta 109  Q
    ||||||    
T  1009 ccctta 1014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 23045 - 23148
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||| ||  |||||||||||| |||||||||||||   || |||||||||||| ||    
T  23045 taattaatttataataaagtcaaaaacagtttccttttatgttaataattctcttttatggtatgtttaaccagtgccccaaggacaccggttagcaaga 23144  T
Q  104 ccct 107  Q
    ||||    
T  23145 ccct 23148  T

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Target: scaffold0014 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 68384 - 68290
Alignment:
Q  12 ttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||||| || |||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||| |  |||| |||||||||||||||    
T  68384 ttataataaagttaaaatcagtttccttttaaggtaataattcccttttatggtatgcttaaccagtaccccgaaggcatcggttagcaggaccc 68290  T

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Target: scaffold0007 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 233937 - 234039
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||||||||||||  ||||| | | |||||||||||| |||||| || | | ||||||||||||||||||||    
T  233937 taattaatttataataaagtcaaaagcagtttccttttatgaaaataatttccttttatggtatgtttaaccggtactccgggggcaccggttagcagga 234036  T
Q  104 ccc 106  Q
    |||    
T  234037 ccc 234039  T

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Target: scaffold0050 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 69310 - 69413
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| ||||||  ||||| |||||||| | | |||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  69310 taattaatttataataaagtcaaaagcagtttttttttaaggtaataatttc-ttttatggtatgcttaaccagtgcctcgggagcaccggttagaagga 69408  T
Q  104 ccctt 108  Q
    |||||    
T  69409 ccctt 69413  T

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Target: scaffold0038 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 25802 - 25910
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||| ||| ||||||||||| ||||| ||||| || |  ||||| |||||| ||||    
T  25802 taattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatccttaaacagtgacccgaaggcacaggttagtagga 25901  T
Q  104 cccttatta 112  Q
    |||||||||    
T  25902 cccttatta 25910  T

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Target: scaffold0113 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 41003 - 41105
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||| | ||||||| ||||||||||||||| |||||| | | ||||||| ||||||||||||||| || || | |||||||| ||||||    
T  41003 taattaatttataatgaagtcaaaaacagtttccttttatgataataatttccttttatgatatgcttaaccagtgtcccggagacaccggttggcagga 41102  T
Q  104 ccc 106  Q
    |||    
T  41103 ccc 41105  T

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Target: scaffold0021 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 116288 - 116392
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||| ||||||| |||| || ||||||||||||||| |||||| ||| |||||||||||| |||||| ||||||  |||  |||||||||||| |    
T  116288 taattaattgataataaagtcagaaacagtttccttttatgataataattcccttttatggtatgtttaacccgtgccccagggataccggttagcagta 116387  T
Q  104 ccctt 108  Q
    |||||    
T  116388 ccctt 116392  T

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Target: scaffold0034 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 95686 - 95584
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||| ||| |||||||||||| |||||| ||  ||  ||||| |||||||| ||||    
T  95686 taattaatttataataaagtcaaaa-cagttttcttttatggtaataattcccttttatggtatgtttaaccggtatcccaggggctccggttaggagga 95588  T
Q  104 ccct 107  Q
    ||||    
T  95587 ccct 95584  T

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Target: scaffold0045 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 50630 - 50719
Alignment:
Q  2 tataattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcac 91  Q
    ||||||||||||||||||| |||||||||| ||| |||||||| |||||| ||  |||||| ||||| ||||||||||| | ||||||||    
T  50630 tataattaatttataataaagtcaaaatcaattttcttttatgataataattctcttttatagtatgtttaaccagtgctccgggggcac 50719  T

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Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 53406 - 53358
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggacc 105  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||||    
T  53406 ttttatggtatgcttaactagtgccccggaggcaccggttagcaggacc 53358  T

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Target: scaffold0325 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 17572 - 17502
Alignment:
Q  5 aattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaacc 75  Q
    |||||||||||||||| ||||||| |||||| |||||||| |||||| ||| |||||||||||| ||||||    
T  17572 aattaatttataataaagtcaaaaacagttttcttttatgataataattcctttttatggtatgtttaacc 17502  T

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Target: scaffold1152 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 762 - 863
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagt-gccctgggggcaccggttagcagg 102  Q
    ||||||||||||||||| ||||||| | |||| |||||||||| |||| ||  |||||||||||||||||| | | ||||  |||||||||||||| |||    
T  762 taattaatttataataaagtcaaaaactgttttcttttatggtgataattctcttttatggtatgcttaactaatagccc--ggggcaccggttagtagg 859  T
Q  103 accc 106  Q
    ||||    
T  860 accc 863  T

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Target: scaffold0674 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 7965 - 7915
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    ||||||||||||||||||| |||||| || || ||||||||||||||||||    
T  7965 ttttatggtatgcttaacccgtgccccggaggtaccggttagcaggaccct 7915  T

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Target: scaffold0549 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 7406 - 7456
Alignment:
Q  57 ttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccct 107  Q
    ||||||||||||||||||| |||||| || || ||||||||||||||||||    
T  7406 ttttatggtatgcttaacccgtgccccggaggtaccggttagcaggaccct 7456  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 147007 - 146933
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagt 78  Q
    ||||||||| ||||||| ||||||| |||||| || ||| |||||||| | | ||||||||||||||||| ||||    
T  147007 taattaattgataataaagtcaaaaacagttttctattacggtaataatttctttttatggtatgcttaatcagt 146933  T

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Target: scaffold0206 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 11040 - 10990
Alignment:
Q  55 cattttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 106  Q
    ||||||||||||||||||||  |||||| ||||||||| |||||||||||||    
T  11040 cattttatggtatgcttaactggtgccc-gggggcaccagttagcaggaccc 10990  T

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Target: scaffold1266 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 376 - 450
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagt 78  Q
    |||| |||||||||||| ||||||| |||||||||| || |||||||| ||  ||||||| |||| |||| ||||    
T  376 taataaatttataataaagtcaaaaacagtttccttctacggtaataattctcttttatgatatgattaatcagt 450  T

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Target: scaffold0263 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 19687 - 19585
Alignment:
Q  4 taattaatttataataatgtcaaaatcagtttccttttatggtaataactccattttatggtatgcttaaccagtgccctgggggcaccggttagcagga 103  Q
    |||| |||||||||||| ||||||| ||||||||||||| | |||||  ||  ||||||| |||| |||| ||||| || ||   | |||||||||||||    
T  19687 taatgaatttataataaagtcaaaaacagtttccttttacgataatagttctcttttatgatatgattaatcagtgtcccggaaactccggttagcagga 19588  T
Q  104 ccc 106  Q
    |||    
T  19587 ccc 19585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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