View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6563_high_47 (Length: 238)
Name: NF6563_high_47
Description: NF6563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6563_high_47 |
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Alignment Details
Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 44720713 - 44720561
Alignment:
| Q |
17 |
agaagcttc-tacttacaaagtgttatttggtggttaagttgagtgaatctaatttttcaatggacaatattaaaagaaaataaacaatataaaatgtgt |
115 |
Q |
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| T |
44720713 |
agaagcttcctacttacaaagtgttatttggtggttaagttgagtgaatctaatttttcaatggacaatattaaaagaaaataaacaatataaaatgtgt |
44720614 |
T |
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| Q |
116 |
catagtctttttctgttatattataatatatccagactaaagtagtacctgac |
168 |
Q |
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| T |
44720613 |
catagtctttttctgttatattataatatatccagactaaagtagtacttgac |
44720561 |
T |
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