View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6564_high_9 (Length: 286)
Name: NF6564_high_9
Description: NF6564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6564_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 5067167 - 5067448
Alignment:
| Q |
1 |
aaaagggtgattaattaatgtgataaatcacagtgccatgcaagggaagatgatcaaagtagnnnnnnnnnnnnn----atcaagaaaatatgaagaaaa |
96 |
Q |
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| T |
5067167 |
aaaagggtgattaattaatgtgataaatcacagtgccatgcaagggaagatgatcaaagtagtttttttttttttttttatcaagaaaatatgaagaaaa |
5067266 |
T |
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| Q |
97 |
tgaaaccaatggaatagtctaaaaaaccaagtacataaaaaccactccactaacaagaaacatgaacataggaacattagactttatagaacacatgcac |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
5067267 |
tgaaaccaatggaatagtctaaaaaaccaagtacataaaaaccactccactaacaagaaacatgaacataggaacattagac-ttatagaacacatgcac |
5067365 |
T |
|
| Q |
197 |
caaagtaaccaatcaaatgatgatgatggnnnnnnnnnnnnnnnnncatgtgaagttgtttatgatttttaccttgacctttg |
279 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
5067366 |
caaagtaaccaatcaaatgatgatgatggaaaaacaaaacaaaaaacatgtgaagttgtttatgatttttaccttgacctttg |
5067448 |
T |
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