View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6564_low_11 (Length: 258)
Name: NF6564_low_11
Description: NF6564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6564_low_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 258
Target Start/End: Complemental strand, 40222305 - 40222062
Alignment:
| Q |
16 |
attatatatgaggggg-ctataaaatggttctaattaattagctgttgcttcagattttgctatggaaatgtgagatttcaagatgaagtaggactatgt |
114 |
Q |
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| T |
40222305 |
attatatatgaggggggctataaaatggttctaattaattagctattgcttcagattttgctatggaaatgtgacatttcaagatgaagtaggactatgt |
40222206 |
T |
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| Q |
115 |
actggatacagtggtatgattatgattcattgcttacatttttataaatttgtgttttatgctaacagggttcgatatctattagcatgagattgtacca |
214 |
Q |
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| T |
40222205 |
actggctacagtggtatgattatgattcattgcttacatttttgtaaatttgtggtttatgctaacagggttcgatatctattagcatgagattgtacca |
40222106 |
T |
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| Q |
215 |
taccacattctgcttcgtttgcactcacttggcctctggagaga |
258 |
Q |
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| T |
40222105 |
aaccacattctgcttcgtttgcactcacttggcctctggagaga |
40222062 |
T |
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