View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6568_high_11 (Length: 307)

Name: NF6568_high_11
Description: NF6568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6568_high_11
NF6568_high_11
[»] chr5 (2 HSPs)
chr5 (108-290)||(13374869-13375053)
chr5 (108-290)||(9671848-9672031)
[»] scaffold0060 (1 HSPs)
scaffold0060 (147-290)||(12200-12343)
[»] chr8 (2 HSPs)
chr8 (148-290)||(21142893-21143035)
chr8 (147-232)||(358391-358476)
[»] chr3 (2 HSPs)
chr3 (147-290)||(33781001-33781144)
chr3 (147-232)||(24613173-24613258)
[»] chr1 (3 HSPs)
chr1 (147-290)||(9626889-9627036)
chr1 (147-262)||(42301140-42301255)
chr1 (4-36)||(42301372-42301404)
[»] chr4 (8 HSPs)
chr4 (147-290)||(23702775-23702918)
chr4 (108-290)||(35786216-35786399)
chr4 (147-290)||(55018156-55018302)
chr4 (147-290)||(38157429-38157574)
chr4 (147-232)||(4906542-4906627)
chr4 (147-232)||(4932411-4932496)
chr4 (147-232)||(29757168-29757253)
chr4 (104-181)||(22674508-22674587)
[»] chr2 (4 HSPs)
chr2 (108-262)||(42929315-42929471)
chr2 (147-266)||(10344407-10344526)
chr2 (147-266)||(44820450-44820569)
chr2 (1-30)||(10344257-10344286)
[»] chr6 (4 HSPs)
chr6 (147-266)||(12600575-12600694)
chr6 (147-266)||(20772982-20773101)
chr6 (147-232)||(842599-842684)
chr6 (4-36)||(20773216-20773248)


Alignment Details
Target: chr5 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 108 - 290
Target Start/End: Complemental strand, 13375053 - 13374869
Alignment:
Q  108 caaactcaggaaaagaaagaaaaaacaaacannnnnnnn--aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacatta 205  Q
    ||||| |||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13375053 caaacccaggaaaagaaagaaaaaacaaacagattttttttaaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaacacatta 13374954  T
Q  206 aaacaacacaaactctcttcatcaattatataaaaacacaaaattacacaattcaaacacatgttcaaattacacagttgaaaat 290  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13374953 aaacaacacaaactctcttcatcaattacataaaaacacaaaattacacaattcaaacacatgttcaaattacacagttgaaaat 13374869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 108 - 290
Target Start/End: Complemental strand, 9672031 - 9671848
Alignment:
Q  108 caaactcaggaaaagaaagaaaaaacaaacannnnnnnn-aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaa 206  Q
    ||||| |||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  9672031 caaacccaggaaaagaaagaaaaaacaaacatatttttttaaacaaaactaataatcatcaatcaacaacaacaagatccactattcatcaacacattaa 9671932  T
Q  207 aacaacacaaactctcttcatcaattatataaaaacacaaaattacacaattcaaacacatgttcaaattacacagttgaaaat 290  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9671931 aacaacacaaactctcttcatcaattacataaaaacacaaaattacacaattcaaacacatgttcaaattacacagttgaaaat 9671848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 147 - 290
Target Start/End: Original strand, 12200 - 12343
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaattatataaaaacacaa 246  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  12200 aaacaaaactaataatcatcaatcaacaacaacaagacccactattcatcaacacattaaaacaacacaaactctcttcatcaattacataaaaacacaa 12299  T
Q  247 aattacacaattcaaacacatgttcaaattacacagttgaaaat 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12300 aattacacaattcaaacacatgttcaaattacacagttgaaaat 12343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 148 - 290
Target Start/End: Original strand, 21142893 - 21143035
Alignment:
Q  148 aacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaattatataaaaacacaaa 247  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  21142893 aacaaaactaataatcatcaatcaacaacaacaagagccactattcatcaacacattaaaacaacacaaactctctttatcaattacataaaaacacaaa 21142992  T
Q  248 attacacaattcaaacacatgttcaaattacacagttgaaaat 290  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21142993 attacacaattcaaacacatgttcaaattacacagttgaaaat 21143035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 358391 - 358476
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaatt 232  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  358391 aaacaaaactaataatcatcaatcaacaacaacaagacccactattcatcaacacattaaaacaacacaaactcttttcatcaatt 358476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 147 - 290
Target Start/End: Complemental strand, 33781144 - 33781001
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaattatataaaaacacaa 246  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  33781144 aaacaaaactaataatcatcaatcaacaacaacaagagccactattcatcaacacattaaaacaacacaaactctcttcatcaattacataaaaacataa 33781045  T
Q  247 aattacacaattcaaacacatgttcaaattacacagttgaaaat 290  Q
    |||| ||||||||||||||||||||||||||||| |||||||||    
T  33781044 aattgcacaattcaaacacatgttcaaattacacggttgaaaat 33781001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 24613258 - 24613173
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaatt 232  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  24613258 aaacaaaactaataatcatcaatcaacaacaacaagacccactattcatcaacacattaaaacaacacaaactcttttcatcaatt 24613173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 147 - 290
Target Start/End: Original strand, 9626889 - 9627036
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaac----aagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaattatataaaaac 242  Q
    |||||||||||||||||||||||||||| ||||    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  9626889 aaacaaaactaataatcatcaatcaacagcaacgtacaagacccactcttcatcaatacattaaaacaacataaactctcttcatcaattacataaaaac 9626988  T
Q  243 acaaaattacacaattcaaacacatgttcaaattacacagttgaaaat 290  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  9626989 acaaaattacacaattcaaacacatgttcaaattacacagctgaaaat 9627036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 42301255 - 42301140
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaattatataaaaacacaa 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| || |||||| ||||||||||||    
T  42301255 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttaatcaacacattaaaacaacataaactctctacaccaattacataaaaacacaa 42301156  T
Q  247 aattacacaattcaaa 262  Q
    ||||||||||||||||    
T  42301155 aattacacaattcaaa 42301140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 42301404 - 42301372
Alignment:
Q  4 aaaaacgtaaaatcaaaatttcaaatttcaaat 36  Q
    |||||||||||||||||||||||||||| ||||    
T  42301404 aaaaacgtaaaatcaaaatttcaaatttaaaat 42301372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 147 - 290
Target Start/End: Original strand, 23702775 - 23702918
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaattatataaaaacacaa 246  Q
    |||||||||||||||||||||||||||||||| |||| ||||| | |||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  23702775 aaacaaaactaataatcatcaatcaacaacaaaaagatccactatacatcaacacattaaaacaacacaaactctcttcatcaattaaataaaaacacaa 23702874  T
Q  247 aattacacaattcaaacacatgttcaaattacacagttgaaaat 290  Q
    |||||||||||| |||||||||||||||||||||| ||||||||    
T  23702875 aattacacaatttaaacacatgttcaaattacacaattgaaaat 23702918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 108 - 290
Target Start/End: Complemental strand, 35786399 - 35786216
Alignment:
Q  108 caaactcaggaaaagaaagaaaaaacaaacannnnnnnn-aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaa 206  Q
    ||||| |||||||||||||||||||||||||         ||||||||||||||||||||||||||||| ||||| | ||||  |||||||| |||||||    
T  35786399 caaacccaggaaaagaaagaaaaaacaaacatatttttttaaacaaaactaataatcatcaatcaacaataacaaaatccaccattcatcaacacattaa 35786300  T
Q  207 aacaacacaaactctcttcatcaattatataaaaacacaaaattacacaattcaaacacatgttcaaattacacagttgaaaat 290  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35786299 aacaacacgaactctcttcatcaattacataaaaacataaaattacacaattcaaacacatgttcaaattacacagttgaaaat 35786216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 147 - 290
Target Start/End: Original strand, 55018156 - 55018302
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactctt--catcaatacattaaaacaacacaaactctcttcatcaattatataaaa-aca 243  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||  |||||| ||||||||||| |||||||||||||||||||||| |||||| |||    
T  55018156 aaacaaaactcataatcatcaatcaacaacaacaagacccacacttttcatcaacacattaaaacatcacaaactctcttcatcaattacataaaaaaca 55018255  T
Q  244 caaaattacacaattcaaacacatgttcaaattacacagttgaaaat 290  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||    
T  55018256 caaaattacacaattcaaacacatgttcaaattataaagttgaaaat 55018302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 147 - 290
Target Start/End: Original strand, 38157429 - 38157574
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactctt--catcaatacattaaaacaacacaaactctcttcatcaattatataaaaacac 244  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||  |||||| ||||||||||| |||||||||||||||||||||| |||| ||| |    
T  38157429 aaacaaaactcataatcctcaatcaacaacaacaagacccacacttttcatcaacacattaaaacatcacaaactctcttcatcaattacataacaacgc 38157528  T
Q  245 aaaattacacaattcaaacacatgttcaaattacacagttgaaaat 290  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||    
T  38157529 aaaattacacaattcaaacacatgttcagattacaaagttgaaaat 38157574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 4906542 - 4906627
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaatt 232  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  4906542 aaacaaaactaataatcatcaatcaacaacaacaagacccactattcatcaacacattaaaacaacacaaactcttttcatcaatt 4906627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 4932411 - 4932496
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaatt 232  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||    
T  4932411 aaacaaaactaataatcatcaatcaacaacaacaagacccactattcatcaacacattaaaacaatacaaactcttttcatcaatt 4932496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 29757253 - 29757168
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaatt 232  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  29757253 aaacaaaactaataatcatcagtcaacaacaacaagacccactattcatcaacacattaaaacaacacaaactcttttcatcaatt 29757168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 22674508 - 22674587
Alignment:
Q  104 acatcaaactcaggaaaagaaagaaaaaacaaacannnnnnnn--aaacaaaactaataatcatcaatcaacaacaacaa 181  Q
    ||||||||| |||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  22674508 acatcaaacccaggaaaagaaagaaaaaacaaacatattttttttaaacaaaactaataatcatcaatcaacaacaacaa 22674587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 5e-53; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 108 - 262
Target Start/End: Original strand, 42929315 - 42929471
Alignment:
Q  108 caaactcaggaaaagaaagaaaaaacaaacannnnnnnn--aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacatta 205  Q
    ||||| |||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  42929315 caaacccaggaaaagaaagaaaaaacaaacatattttttttaaacaaaactaataatcatcaatcaacaacaacaagacccactattcatcaacacatta 42929414  T
Q  206 aaacaacacaaactctcttcatcaattatataaaaacacaaaattacacaattcaaa 262  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42929415 aaacaacacaaactctcttcatcaattacataaaaacacaaaattacacaattcaaa 42929471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 10344407 - 10344526
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaattatataaaaacacaa 246  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  10344407 aaacaaaactaataatcattaatcaacaacaacaagacccactcttcatcaatacattaaaacaacataaactctcttcaccaattacataaaaacacaa 10344506  T
Q  247 aattacacaattcaaacaca 266  Q
    ||||||||||||||||||||    
T  10344507 aattacacaattcaaacaca 10344526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 44820569 - 44820450
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaattatataaaaacacaa 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| |||||| ||||||||||||    
T  44820569 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaacacattaaaacaacataaactatcttcaccaattacataaaaacacaa 44820470  T
Q  247 aattacacaattcaaacaca 266  Q
    || |||||||||||||||||    
T  44820469 aactacacaattcaaacaca 44820450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 10344257 - 10344286
Alignment:
Q  1 atcaaaaacgtaaaatcaaaatttcaaatt 30  Q
    ||||||||||||||||||||||||||||||    
T  10344257 atcaaaaacgtaaaatcaaaatttcaaatt 10344286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 7e-52; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 12600694 - 12600575
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaattatataaaaacacaa 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||||||||    
T  12600694 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaacacattaaaacaacataaactctcttcaccaattacataaaaacacaa 12600595  T
Q  247 aattacacaattcaaacaca 266  Q
    ||||||||||||||||||||    
T  12600594 aattacacaattcaaacaca 12600575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 20773101 - 20772982
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaattatataaaaacacaa 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| ||||||    
T  20773101 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaaaacattaaaacaacataaactctcttcaccaattatataaatacacaa 20773002  T
Q  247 aattacacaattcaaacaca 266  Q
    ||||||||||||||||||||    
T  20773001 aattacacaattcaaacaca 20772982  T

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Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 842599 - 842684
Alignment:
Q  147 aaacaaaactaataatcatcaatcaacaacaacaagacccactcttcatcaatacattaaaacaacacaaactctcttcatcaatt 232  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  842599 aaacaaaactaataatcatcaatcaacaacaacaagacccactattcatcaacacattaaaacaacacaaactcttttcatcaatt 842684  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 20773248 - 20773216
Alignment:
Q  4 aaaaacgtaaaatcaaaatttcaaatttcaaat 36  Q
    |||||||||||||||||||||||||||| ||||    
T  20773248 aaaaacgtaaaatcaaaatttcaaatttaaaat 20773216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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