View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6569_high_1 (Length: 822)
Name: NF6569_high_1
Description: NF6569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6569_high_1 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 292; Significance: 1e-163; HSPs: 36)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 8 - 386
Target Start/End: Complemental strand, 5065779 - 5065400
Alignment:
| Q |
8 |
agattattctgcaactttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatc |
107 |
Q |
| |
|
||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
5065779 |
agattcttctgtaacttacaattgcgaaggttcttctgtaacttttgaagtccctcaaatgaaagggcgtatgttgaagacaataatgatatgcattgtc |
5065680 |
T |
|
| Q |
108 |
tattcttcaaccacggataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgt |
207 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
5065679 |
tattcttcaaccccggataacatagcatctgatggcctcacaaatttgttggtaaaaaattacacaaaatccaccattcagctctataagagagaggcgt |
5065580 |
T |
|
| Q |
208 |
taatctcctttgaagatgaagaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgt |
307 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5065579 |
taatctcctttgaagatgaggaggggcagagagtagtatcaagtattgaacctggaaataaagtggattttgttgttgtttttgagaacggtttcgttgt |
5065480 |
T |
|
| Q |
308 |
gaag-ggacaacagtttatctcatatatgatgaaccaattgctgaaaaagtggaggagtgtcacgcacaggataagaatg |
386 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||||| |
|
|
| T |
5065479 |
gaagaggacaacagtttatctcatatatgatgaaccaattgctgaaaagggggaggagtgtcatgcacaagataagaatg |
5065400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 8 - 386
Target Start/End: Original strand, 5253514 - 5253877
Alignment:
| Q |
8 |
agattattctgcaactttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatc |
107 |
Q |
| |
|
||||| ||||| ||||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| |||| |||| ||||| || |
|
|
| T |
5253514 |
agattcttctgtaactttcaattgtgaaggttcttctgtaccttttaaagtccctcaattggaagggcgtatgttgaagacaataaagataagcattgtc |
5253613 |
T |
|
| Q |
108 |
tattcttcaaccacggataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgt |
207 |
Q |
| |
|
|| ||||||||| | ||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
5253614 |
taatcttcaaccccagataacacaacatctgatggcttcacaaatttgttggtaaaaaattacacaaaggccaccattcagctc---------------- |
5253697 |
T |
|
| Q |
208 |
taatctcctttgaagatgaagaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgt |
307 |
Q |
| |
|
|||||||||||||||| || |||||||| |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
5253698 |
taatctcctttgaagacgaggaggggcaaagagtattattaagtattgaacctggaaataaagtggagtttgttgttgtttttgagaacagtttcattgt |
5253797 |
T |
|
| Q |
308 |
gaag-ggacaacagtttatctcatatatgatgaaccaattgctgaaaaagtggaggagtgtcacgcacaggataagaatg |
386 |
Q |
| |
|
|||| |||| |||||||||||||||||||| || || ||||||||||| | |||||||||||| | ||| |||| ||||| |
|
|
| T |
5253798 |
gaagaggacgacagtttatctcatatatgacgagcccattgctgaaaaggcggaggagtgtcatggacaagatatgaatg |
5253877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 34 - 353
Target Start/End: Complemental strand, 5126933 - 5126613
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| || ||||||||| |||||||| |||||||||||||| |||||||||||||| |||||||||| | |
|
|
| T |
5126933 |
aaggttcttcggtaacttttgaagtacctcaagtgaaagggcgtacgttgaagaaagtaatgatatgcattgtctattcttcaaccttggataacataac |
5126834 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
||| |||||||| |||| |||||||||||||||||||| |||||||||||||| |||||||||| |||||| | |||||||||||||||| |||||| |
|
|
| T |
5126833 |
atcagatggccttacaagcttgttggtgaaaaattacacgaaggccaccattcaactctataagagagaggcagcagtctcctttgaagatgaggagggg |
5126734 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||| ||| |||||||||||||| ||||||||||| |||||||| |||| | ||||||||||||| |
|
|
| T |
5126733 |
gagagagtagtatcaagtatagaagctggtaacaaagttgagattgttgttgtttttaagaacggtttcattgtgaagaagacagctgtttatctcatat |
5126634 |
T |
|
| Q |
333 |
atgatgaaccaattgctgaaa |
353 |
Q |
| |
|
||||||||||||||| ||||| |
|
|
| T |
5126633 |
atgatgaaccaattggtgaaa |
5126613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 24 - 361
Target Start/End: Original strand, 5177720 - 5178058
Alignment:
| Q |
24 |
ttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacgg |
123 |
Q |
| |
|
|||||||| |||||||||| |||| ||||||||||||||| |||||||| | | || ||||| || |||||||||||| ||||||||||||| || |
|
|
| T |
5177720 |
ttcaattgcgaaggttcttcggtaatgtttgaagtccctcaagtggaagggtgcactttaaagacaatgatgatatgcattgactattcttcaaccctgg |
5177819 |
T |
|
| Q |
124 |
ataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaaga |
223 |
Q |
| |
|
|||| ||| |||| ||||||| |||| |||||||| || ||||||||||| |||||||||||||| ||||||| |||||| ||| |||||||||||| |
|
|
| T |
5177820 |
ataatataacatcaaatggccttgcaaacttgttggttaagaattacacaaaagccaccattcagctttataagagagaggcattagcctcctttgaaga |
5177919 |
T |
|
| Q |
224 |
tgaagaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtt |
322 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
5177920 |
tgaagagggtcagagagtagtatcaagtatagaaccttgtaacaaagtggaggttgttgttgtttttgagaacggtttcattgtgaagaaaacaacagtt |
5178019 |
T |
|
| Q |
323 |
tatctcatatatgatgaaccaattgctgaaaaagtggag |
361 |
Q |
| |
|
|||||| |||||||||||||||||| |||||| ||||| |
|
|
| T |
5178020 |
tatctcgtatatgatgaaccaattggagaaaaaatggag |
5178058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 24 - 361
Target Start/End: Original strand, 5279545 - 5279883
Alignment:
| Q |
24 |
ttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacgg |
123 |
Q |
| |
|
|||||||| |||||||||| |||| ||||||||||||||| |||||||| | | || ||||| | |||||||||||| ||||||||||||| || |
|
|
| T |
5279545 |
ttcaattgcgaaggttcttcggtaatgtttgaagtccctcaagtggaagggtgcactttaaagacattgatgatatgcattgactattcttcaaccctgg |
5279644 |
T |
|
| Q |
124 |
ataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaaga |
223 |
Q |
| |
|
|||| ||| |||| ||||||| |||| ||||||||||| ||||||||||| |||||||||||||| ||||||| |||||| ||| |||||||||||| |
|
|
| T |
5279645 |
ataatataacatcaaatggccttgcaaacttgttggtgaagaattacacaaaagccaccattcagctttataagagagaggcattagcctcctttgaaga |
5279744 |
T |
|
| Q |
224 |
tgaagaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtt |
322 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
5279745 |
tgaagagggtcagagagtagtatcaagtatagaaccttgtaacaaagtggaggttgttgttgtttttgagaacggtttcattgtgaagaaaacaacagtt |
5279844 |
T |
|
| Q |
323 |
tatctcatatatgatgaaccaattgctgaaaaagtggag |
361 |
Q |
| |
|
|||||| |||||||||||||||||| |||||| ||||| |
|
|
| T |
5279845 |
tatctcgtatatgatgaaccaattggagaaaaaatggag |
5279883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 20 - 340
Target Start/End: Original strand, 5346006 - 5346327
Alignment:
| Q |
20 |
aactttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaacc |
119 |
Q |
| |
|
||||||||||| | ||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||| |||| |||||| || ||||||||||||| |
|
|
| T |
5346006 |
aactttcaattctgaaggttcttctgttacttttgaagttcctcaagtggaagggcgaatgttgaagacaataacgatatgtgttgtctattcttcaact |
5346105 |
T |
|
| Q |
120 |
acggataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg |
219 |
Q |
| |
|
||||||| ||| ||||||||||||| | ||| |||||||||||||||||||||||||| ||||||||||| || |||| |||||| || | |||||| |
|
|
| T |
5346106 |
tcggataatataacatctgatggcctgagaaacttgttggtgaaaaattacacaaaggctaccattcagctatacaagagagaggcagtagccgcctttg |
5346205 |
T |
|
| Q |
220 |
aagatgaagaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaac |
318 |
Q |
| |
|
||||||| ||||| |||||||| ||||||||||| |||||||| |||||||||||| |||| |||||| ||||||| |||||| |||||||| |||| | |
|
|
| T |
5346206 |
aagatgaggagggccagagagttgtatcaagtatagaacctggtaacaaagtggaggttgtcgttgttattgagaatggtttcattgtgaagaagacagc |
5346305 |
T |
|
| Q |
319 |
agtttatctcatatatgatgaa |
340 |
Q |
| |
|
| |||||||||||||||||||| |
|
|
| T |
5346306 |
aatttatctcatatatgatgaa |
5346327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 24 - 346
Target Start/End: Complemental strand, 5689217 - 5688894
Alignment:
| Q |
24 |
ttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacgg |
123 |
Q |
| |
|
|||||||| |||||||||| |||| ||||||||||||||| |||||||||| | || ||||| | ||||||||||| ||||||| ||||| || |
|
|
| T |
5689217 |
ttcaattgcgaaggttcttcggtaatgtttgaagtccctcaagtggaagggcgcactttaaagacattgatgatatgcatcgactattctacaaccctgg |
5689118 |
T |
|
| Q |
124 |
ataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaaga |
223 |
Q |
| |
|
|||||||| |||| ||||||| |||| ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||| ||| ||||||||||||| |
|
|
| T |
5689117 |
ataacataacatcaaatggccttgcaaacttgttggtgaagaattacacaaaagccaccattcagctttataagagcgaggcattagtctcctttgaaga |
5689018 |
T |
|
| Q |
224 |
tgaagaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtt |
322 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||| | |||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
5689017 |
tgaagagggacagagagtagtatcaagtatagaaccttgtaacaaagtggaggttgtttctgtttttgagaacggtttcattgtgaagaaaacaacagtt |
5688918 |
T |
|
| Q |
323 |
tatctcatatatgatgaaccaatt |
346 |
Q |
| |
|
|||||| ||||||||||||||||| |
|
|
| T |
5688917 |
tatctcgtatatgatgaaccaatt |
5688894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 34 - 347
Target Start/End: Complemental strand, 5242816 - 5242502
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||| |||||| | ||||||||||||| |||||| ||| | |
|
|
| T |
5242816 |
aaggttcttctgttacttttgaagtccctcaagtggaagggcgaatgttgaagacaataacgatatgtgctgtctattcttcaacttcggatagtataac |
5242717 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||| || | ||||||||||||| ||||| |
|
|
| T |
5242716 |
atctgatggccttggaaacttgttagtgaaaaattacacaaaggccaccattcagctctacaagagagaggcagtagccgcctttgaagatgagaagggg |
5242617 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
| ||||||||||| |||||| |||||||| |||||||||||| | ||| |||||||||||||| ||||| |||||||| |||| |||||||||| ||| |
|
|
| T |
5242616 |
ctgagagtagtatgaagtatagaacctggtaacaaagtggaggtcgtttttgtttttgagaacagtttcattgtgaagaagacagtagtttatctcgtat |
5242517 |
T |
|
| Q |
333 |
atgatgaaccaattg |
347 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
5242516 |
atgatgaaccaattg |
5242502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 34 - 343
Target Start/End: Complemental strand, 5101119 - 5100812
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||| |||||| ||||| |||||||| | ||||||||| | |
|
|
| T |
5101119 |
aaggttcttctgtaactttagaagtccctcaagtggaagggcgtaacttgaagac---aatgatgtgcattgtctatacttcaaccccagataacataac |
5101023 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
||| |||||| | |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||| |||| |
|
|
| T |
5101022 |
atcaagtggccttaaaaatgtgttagtgaaaaattacacaaaggccaccattcagctctataagagcgaggcattagtctcctttgaagatgaggaggct |
5100923 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtg-aagggacaacagtttatctcatat |
332 |
Q |
| |
|
| ||| |||||||||||||| ||||| || |||||||||||| | |||||||||||||||||| ||||| ||||| || |||| ||||||||||| ||| |
|
|
| T |
5100922 |
ctgagggtagtatcaagtatagaacccggtaacaaagtggaggtcgttgttgtttttgagaacagtttcattgtgaaaaagacagcagtttatctcgtat |
5100823 |
T |
|
| Q |
333 |
atgatgaacca |
343 |
Q |
| |
|
| ||||||||| |
|
|
| T |
5100822 |
acgatgaacca |
5100812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 550 - 725
Target Start/End: Complemental strand, 5065190 - 5065015
Alignment:
| Q |
550 |
ttgtgcagtctgcaatctgcctttgttcatttatcttctgttaggctttagaaattttatatgtattcattggttctatcattgtaaaatcatcaatata |
649 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5065190 |
ttgtggagtctacaatctgcttttgttcatttttcttctgttaggctttagaaatttcatatgtattcgttggttctatcattgtaaaatcatcaatata |
5065091 |
T |
|
| Q |
650 |
taatgaaattttaaacattcattacgagtgtacataaaaggtatgagaaaagttttctgaatgtgaagtataaact |
725 |
Q |
| |
|
| | ||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||| |
|
|
| T |
5065090 |
tgaagaagttttaaacattcattacgagtgtacataaaaggtatgatagaagttttctgaatgggaagtataaact |
5065015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 34 - 343
Target Start/End: Complemental strand, 5136220 - 5135913
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||| |||||| ||||| |||||||| | ||||||||| | |
|
|
| T |
5136220 |
aaggttcttctgtaactttagaagtccctcaagtggaagggcgtaacttgaagac---aatgatgtgcattgtctatacttcaaccccagataacataac |
5136124 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
||| |||||| | |||| ||||||| |||||||||||||||||||||||||||||||| |||| || || ||| ||||||||||||||| |||| |
|
|
| T |
5136123 |
atcaagtggccttaaaaatgtgttggtaaaaaattacacaaaggccaccattcagctctacaagagcgaagcattagcctcctttgaagatgaggaggct |
5136024 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtg-aagggacaacagtttatctcatat |
332 |
Q |
| |
|
| ||| |||||||||||||| ||||| || |||||||||||| | |||||||||||||||||| ||||| ||||| || |||| ||||||||||| ||| |
|
|
| T |
5136023 |
ctgagggtagtatcaagtatagaacccggtaacaaagtggaggtcgttgttgtttttgagaacagtttcattgtgaaaaagacagcagtttatctcgtat |
5135924 |
T |
|
| Q |
333 |
atgatgaacca |
343 |
Q |
| |
|
| ||||||||| |
|
|
| T |
5135923 |
acgatgaacca |
5135913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 36 - 337
Target Start/End: Original strand, 5398042 - 5398341
Alignment:
| Q |
36 |
ggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagcat |
135 |
Q |
| |
|
||||||||| ||||||||||||| ||||| |||||||||||| |||||||| |||||| |||||| | ||| ||||||| |||||| || ||| |
|
|
| T |
5398042 |
ggttcttctttaacttttgaagttcctcatgtggaagggcgtaacttgaagac---aatgatgtgcattgtgtatacttcaactctggataatgtaacat |
5398138 |
T |
|
| Q |
136 |
ctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggggca |
235 |
Q |
| |
|
|| |||||| | ||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
5398139 |
ctagtggccttaaaaacatgttagtgataaattacacaaaggccaccattcagctctataagagtgaggcgttattctcctttgaacatgaagaggggca |
5398238 |
T |
|
| Q |
236 |
gagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatatat |
334 |
Q |
| |
|
|| |||||||||||||| |||||||| |||||||| ||| |||| ||||||| ||||| | |||| |||||||| ||||||||||||||| ||||| |
|
|
| T |
5398239 |
aagggtagtatcaagtatagaacctggtaacaaagttgaggttgtctttgttttcgagaatgatttcattgtgaagaagacaacagtttatcttgtatat |
5398338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 34 - 347
Target Start/End: Complemental strand, 5353164 - 5352853
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
|||||||||||||||||||| | ||||||| |||||||||||| |||||||| |||||| |||||||||||| | |||||| |||||||| | |
|
|
| T |
5353164 |
aaggttcttctgtaacttttcatgtccctctggtggaagggcgtaacttgaagac---aatgatgtgcattatctatacgtcaacccaaaataacataac |
5353068 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
|| ||||||| | |||| ||||| | ||||||||||||||||| ||||||||||| ||||||| |||||| ||||| |||||||||||||| |||||| |
|
|
| T |
5353067 |
ttcatatggccttaaaaatgtgttgctaaaaaattacacaaaggctaccattcagctttataagagagaggcattaatttcctttgaagatgaggagggg |
5352968 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||| ||| | ||| ||||||| ||||| ||||| | |||||| ||||||| ||||||| ||| |
|
|
| T |
5352967 |
cagagagtagtatcaagtatggatcctggtgacaaagtagaggtggttattgttttcgagaattgtttcatcgtgaagaagacaacaatttatctggtat |
5352868 |
T |
|
| Q |
333 |
atgatgaaccaattg |
347 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
5352867 |
atgataaaccaattg |
5352853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 34 - 289
Target Start/End: Original strand, 5439005 - 5439257
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||||| |||| | | | |||| |||||| ||||||||||||| ||||||||||| | |
|
|
| T |
5439005 |
aaggttcttctgtaacttttcaagtccctcaagtggaagggcgtaatttgatgtc---attgatgtgcattgtctattcttcaactccggataacataac |
5439101 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
||| ||| |||| | |||| | ||||||| |||| |||||||||||||||||||||||||||||| ||||| || |||| ||||||||||| |||||| |
|
|
| T |
5439102 |
atcagatagccttataaatgtattggtgataaatcacacaaaggccaccattcagctctataagagtgaggctgtagtctcttttgaagatgaggagggg |
5439201 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttt |
289 |
Q |
| |
|
||||| || ||||||||| |||||||| |||||||||||| ||||| ||||||| |
|
|
| T |
5439202 |
cagaggttaaaatcaagtatagaacctggtaacaaagtggaggttgtttttgtttt |
5439257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 34 - 361
Target Start/End: Original strand, 5098205 - 5098530
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
|||||||||| ||||||||| |||| || ||| ||||||| |||| ||||| || |||||| |||||| ||||| |||||||| | | |||||| |
|
|
| T |
5098205 |
aaggttcttcggtaacttttcaagttccccaagtggaaggccgtagcttgaaaac---aatgatgtgcattgtctatacttcaaccccagctaacatgat |
5098301 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
||| |||||| | ||| |||| |||||||| |||||||||||||||||||||||||||||| ||||| || |||||||||||||||| ||| | |
|
|
| T |
5098302 |
atcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagc |
5098401 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtg-aagggacaacagtttatctcatat |
332 |
Q |
| |
|
||||| ||| |||||||||| |||||||| |||||||||||| | |||||||||| |||||| ||||| ||||| || |||| |||||||||| ||| |
|
|
| T |
5098402 |
cagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtat |
5098501 |
T |
|
| Q |
333 |
atgatgaaccaattgctgaaaaagtggag |
361 |
Q |
| |
|
||||||||| ||||| ||||||||||||| |
|
|
| T |
5098502 |
atgatgaacaaattggtgaaaaagtggag |
5098530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 34 - 343
Target Start/End: Complemental strand, 5156314 - 5156007
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
||||||||||||| | |||||||| |||||| |||||||||||| |||||||| |||||| |||||| ||||| |||||||| | ||||| || | |
|
|
| T |
5156314 |
aaggttcttctgtgaaatttgaagttcctcaagtggaagggcgtaacttgaagac---aatgatgtgcattgtctatacttcaaccccagataatgtaac |
5156218 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
|| | |||||| | ||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
5156217 |
atgtagtggccttaaaaacatgttattgaaaaattacacaaaggccaccattcagctttataagagtgaggcattggcctcctttgaagatgaagagggg |
5156118 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
||||| |||||||||||| | |||||||| |||||||||||| | | ||||||| |||| |||| |||||||| ||||||||||||||| ||| |
|
|
| T |
5156117 |
cagagggtagtatcaagtctagaacctggtaacaaagtggaggtccattttgttttcgagattaatttcattgtgaagaagacaacagtttatcttgtat |
5156018 |
T |
|
| Q |
333 |
atgatgaacca |
343 |
Q |
| |
|
| ||||||||| |
|
|
| T |
5156017 |
acgatgaacca |
5156007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 34 - 343
Target Start/End: Original strand, 5372091 - 5372398
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
||||||||||||| | |||||||| |||||| |||||||||||| |||||||| || ||| |||| | ||| | ||||||| ||||||| || | |
|
|
| T |
5372091 |
aaggttcttctgtgaaatttgaagttcctcaagtggaagggcgtaacttgaagacaattatg---tgcaatgtctgtacttcaactccggataatgtaac |
5372187 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
|||| |||||| | ||| |||| ||||||||||||||||||||||||||||||| ||||||| || || ||| ||||||||||||||||||||||| |
|
|
| T |
5372188 |
atctagtggccttaaaaacatgttattgaaaaattacacaaaggccaccattcagctttataagagtgaagcattagtctcctttgaagatgaagagggg |
5372287 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
||||| |||||||||||| | |||||||| |||||||||||| | | ||||| | ||||| | |||| |||||||| ||||||| |||||||| ||| |
|
|
| T |
5372288 |
cagagggtagtatcaagtctagaacctggtaacaaagtggagatccattttgttctcgagaatgatttcattgtgaagaagacaacaatttatctcgtat |
5372387 |
T |
|
| Q |
333 |
atgatgaacca |
343 |
Q |
| |
|
| ||||||||| |
|
|
| T |
5372388 |
acgatgaacca |
5372398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 51 - 347
Target Start/End: Complemental strand, 5072966 - 5072672
Alignment:
| Q |
51 |
tttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagcatctgatggcctcacaa |
150 |
Q |
| |
|
||||||||||||||| |||||||||| || |||||||| |||||||||| || ||||||||||| | | |||| ||| ||| || ||||| | || |
|
|
| T |
5072966 |
tttgaagtccctcaagtggaagggcgcatattgaagac---aatgatatgcgttgtctattcttcaccaccaaataatgtagtatcagacggccttaaaa |
5072870 |
T |
|
| Q |
151 |
atttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggggcagagagtagtatcaag |
250 |
Q |
| |
|
| ||| |||||||||||||||| || ||||||||||| || ||||||| |||||| ||| ||||||| ||||||| ||||| ||||| |||||||||| |
|
|
| T |
5072869 |
acttgatggtgaaaaattacactaaagccaccattcaactatataagagagaggcattagtctccttcaaagatgatgagggcgagagattagtatcaag |
5072770 |
T |
|
| Q |
251 |
tattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtg-aagggacaacagtttatctcatatatgatgaaccaattg |
347 |
Q |
| |
|
||| || ||||| ||| |||||||| |||| |||||| ||||||||| |||| ||||| || ||||| | ||||||||||||| |||||| |||||| |
|
|
| T |
5072769 |
tatagagcctggtaaccaagtggaggttgtcgttgttgttgagaacgatttcattgtgaaaaagacaataatttatctcatatacgatgaatcaattg |
5072672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 34 - 295
Target Start/End: Original strand, 5448603 - 5448861
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||| |||| | | | |||| |||||| ||||| |||||||| | ||||| || | |
|
|
| T |
5448603 |
aaggttcttctgtaacttttgaagtccctcaagtggaagagcgtcaattgacgtc---attgatgtgcattgtctatacttcaaccccagataatgtaac |
5448699 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
|||| |||||| | |||| ||||||||||||||||||||||||| |||||||| ||||||||| ||| | ||| | |||||||||||| | |||||| |
|
|
| T |
5448700 |
atctagtggccttaaaaatgtgttggtgaaaaattacacaaaggctaccattcaaatctataagagtgagacattagtttcctttgaagataaggagggg |
5448799 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaa |
295 |
Q |
| |
|
||||| ||||||||||||| ||||| ||||||||||||||| | ||| ||||||| ||||| |
|
|
| T |
5448800 |
cagaggttagtatcaagtatagaacccggaaacaaagtggagatcgtttttgttttcgagaa |
5448861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 160 - 347
Target Start/End: Original strand, 5427017 - 5427205
Alignment:
| Q |
160 |
tgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggggcagagagtagtatcaagtattgaacc |
259 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||| |||| ||| | || ||||||||||| |||||| | ||||||||||||||||| ||||| |
|
|
| T |
5427017 |
tgaaaaattacacaaaggccatcattcagctttataagagtgaggtattagtgtcatttgaagatgaggagggggaaagagtagtatcaagtatagaacc |
5427116 |
T |
|
| Q |
260 |
tggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatatatgatgaaccaattg |
347 |
Q |
| |
|
||| |||||| ||||| | ||| |||||||||||||| |||||||||||| | |||| |||||||||| |||||||||||||||||| |
|
|
| T |
5427117 |
tggtaacaaaatggaggtcgtttttgtttttgagaacagtttcgttgtgacgaagacagtagtttatctcgtatatgatgaaccaattg |
5427205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 34 - 347
Target Start/End: Complemental strand, 23127611 - 23127300
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
||||||||||||||| |||||||| |||||| ||||||||| || ||||||| |||||| || || || || |||||||| | |||||||| | |
|
|
| T |
23127611 |
aaggttcttctgtaagttttgaagctcctcaagtggaagggcataacgtgaagacaataatg---tgtgttgtcaatacttcaaccccagataacattac |
23127515 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
|| |||||| | | ||| ||||||| |||||||||||||||| ||||||||| ||||||||| |||| | ||| |||| || |||||||| || ||| |
|
|
| T |
23127514 |
ctcggatggcgttaaaaacgtgttggtaaaaaattacacaaagggtaccattcagatctataagagagagacattagtctcgttcgaagatgaggaaggg |
23127415 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
|||| ||||||||||| |||||||| |||||| ||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||| |
|
|
| T |
23127414 |
aagagcttagtatcaagtgcagaacctggtaacaaaatggaggttgttgtcgtttttgagaatggtttcgttgtgaagaatacaacagtttatcttgtat |
23127315 |
T |
|
| Q |
333 |
atgatgaaccaattg |
347 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
23127314 |
atgatgaactaattg |
23127300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 552 - 712
Target Start/End: Original strand, 5346606 - 5346762
Alignment:
| Q |
552 |
gtgcagtctgcaatctgcctttgttcatttatcttctgttaggctttagaaattttatatgtattcattggttctatcattgtaaaatcatcaatatata |
651 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||||||||| ||||||| |||||||||||||||||| ||| |
|
|
| T |
5346606 |
gtgcagtctgcaatctgcctttgttcatttttcttcttttaggctgtagaaattccatatgtatttattggttatatcattgtaaaatcatc----gata |
5346701 |
T |
|
| Q |
652 |
atgaaattttaaacattcattacgagtgtacataaaaggtatgagaaaagttttctgaatg |
712 |
Q |
| |
|
| ||||||||||||||||||||| ||||||| ||||| |||| ||||||| |||||||| |
|
|
| T |
5346702 |
aagaaattttaaacattcattaccagtgtacttaaaaaaaatgataaaagttgtctgaatg |
5346762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 38 - 343
Target Start/End: Original strand, 5351398 - 5351701
Alignment:
| Q |
38 |
ttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagcatct |
137 |
Q |
| |
|
||||||||| | |||||||| |||||| ||||||||||| |||||||| |||||| ||||| ||||| |||||||| | | |||| || |||| |
|
|
| T |
5351398 |
ttcttctgtgaaatttgaagttcctcaagtggaagggcgtgacttgaagac---aatgatgtgcatagtctatacttcaacccctggtaacgtaacatca |
5351494 |
T |
|
| Q |
138 |
gatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggggcaga |
237 |
Q |
| |
|
|||||| | ||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||| | |||||||||||||| |||||||||| |
|
|
| T |
5351495 |
agtggccttaaaaacatgttagtgaaaaattacacaaaggccaccattcggctctataagagtgaggcattagtttcctttgaagatgaggaggggcaga |
5351594 |
T |
|
| Q |
238 |
gagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtg-aagggacaacagtttatctcatatatga |
336 |
Q |
| |
|
| ||||||||||||| ||||| | |||||||||||| | || ||||||| ||||| | || | ||||| || |||| |||||||||| ||||||| |
|
|
| T |
5351595 |
ggttagtatcaagtatagaacccagtaacaaagtggaggtcatttttgttttcgagaatgattgcattgtgaaaaagacagtagtttatctcgtatatga |
5351694 |
T |
|
| Q |
337 |
tgaacca |
343 |
Q |
| |
|
||||||| |
|
|
| T |
5351695 |
tgaacca |
5351701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 162 - 311
Target Start/End: Complemental strand, 5180950 - 5180801
Alignment:
| Q |
162 |
aaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggggcagagagtagtatcaagtattgaacctg |
261 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| || ||||| |||| ||||||||||||||||| ||||| ||||||||||| || ||||| | |
|
|
| T |
5180950 |
aaaaattacacaaaggctaccattcagctctataagagtgatacgttagtctcttttgaagatgaagagggtcagagggtagtatcaagcatagaacccg |
5180851 |
T |
|
| Q |
262 |
gaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag |
311 |
Q |
| |
|
| |||||||||||| | ||| ||||||||||||| ||||| |||||||| |
|
|
| T |
5180850 |
gtaacaaagtggaggtcgtttttgtttttgagaaaagtttcattgtgaag |
5180801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 126 - 341
Target Start/End: Complemental strand, 5124655 - 5124439
Alignment:
| Q |
126 |
aacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatg |
225 |
Q |
| |
|
||||||||||| |||||||| | || | || |||||||||||||||| |||| |||||||| |||||||||| ||| || ||| || | ||| |||| | |
|
|
| T |
5124655 |
aacatagcatcggatggccttaaaactgtgatggtgaaaaattacacgaaggggaccattcaactctataagagagatgcattagtcgcatttcaagagg |
5124556 |
T |
|
| Q |
226 |
aagaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaagg-gacaacagttta |
324 |
Q |
| |
|
| |||||||| ||| ||||||| ||||| |||||||| || |||||||| |||||| |||||||| ||||| | ||| ||||||||| ||||||| | || |
|
|
| T |
5124555 |
aggaggggcatagattagtatcgagtatagaacctggtaataaagtggaatttgtttttgtttttaagaaccgcttcattgtgaaggagacaacaatgta |
5124456 |
T |
|
| Q |
325 |
tctcatatatgatgaac |
341 |
Q |
| |
|
| | ||||||||||||| |
|
|
| T |
5124455 |
tattatatatgatgaac |
5124439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 160 - 343
Target Start/End: Original strand, 2939028 - 2939216
Alignment:
| Q |
160 |
tgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaa----gatgaagaggggcagagagtagtatcaagtattg |
255 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||| ||||| ||| ||||||| ||| |||||||| |||||||| |||||||||||| | |
|
|
| T |
2939028 |
tgaaaaattatataaaggccaccattcagctctataagagtgaggcattagtctccttcgaagatggatgaagaagggcagagggtagtatcaagtctat |
2939127 |
T |
|
| Q |
256 |
aacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatatatgatgaacca |
343 |
Q |
| |
|
||||||| |||||||||||| | | ||||| | ||||| | || | |||||||| | ||||| |||||||| |||||||||||||| |
|
|
| T |
2939128 |
aacctggtaacaaagtggaggtccattttgttatcgagaatgattgcattgtgaagaaggcaacaatttatctcgtatatgatgaacca |
2939216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 378 - 469
Target Start/End: Complemental strand, 5065336 - 5065245
Alignment:
| Q |
378 |
ataagaatgaaccaattatctctagtggtgaagaaaatgaatgttttgtcagaaaagcctctcctcaagtggcacccgtggatgacttaaca |
469 |
Q |
| |
|
||||||| ||| ||||| | | ||||||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
5065336 |
ataagaacgaatcaattgtttgtagtggtgaagaaaatgaatgctttgtcagaaaagtctctcctcaagtggttcctgtggatgacttaaca |
5065245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 377 - 550
Target Start/End: Complemental strand, 5126442 - 5126270
Alignment:
| Q |
377 |
gataagaatgaaccaattatctctagtggtgaagaaaatgaatgttttgtcagaaaagcctctcctcaagtggcacccgtggatgacttaacagataaaa |
476 |
Q |
| |
|
|||||||||||||||||| | | ||||| ||||||||| ||| | |||||||| || | |||||||||||||| ||| | ||||| |||| |||| | |
|
|
| T |
5126442 |
gataagaatgaaccaattgtttgtagtgctgaagaaaaggaaggctttgtcaggaaggtatctcctcaagtggctcccattgatgatttaaagcataaca |
5126343 |
T |
|
| Q |
477 |
gaaggaagaaaattctgaagaggaaatggaagacaaaaaagctatggtttggttaagtattggtgctgctagtt |
550 |
Q |
| |
|
|| |||||||||||| ||||||| |||||||||| ||| |||| |||| ||||||||||||||||||||| |
|
|
| T |
5126342 |
aaaagaagaaaattctcaagaggagatggaagacagtaaaagaatgg-ttggataagtattggtgctgctagtt |
5126270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 34 - 295
Target Start/End: Original strand, 5334173 - 5334437
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
||||||||||||| | |||||||| |||||| |||||||| ||| |||||||| |||||| |||||| ||||| ||||||| | ||||| || | |
|
|
| T |
5334173 |
aaggttcttctgtgaaatttgaagttcctcaagtggaagggggtaacttgaagac---aatgatgtgcattttctataattcaaccccagataatgta-c |
5334268 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgtta-------atctcctttgaagatga |
226 |
Q |
| |
|
||| |||||| | ||| |||| |||| |||||||||||||||||||||||| |||||||||| ||||| ||| | || ||| ||||||| |
|
|
| T |
5334269 |
atcaagtggccttaaaaacatgttagtgataaattacacaaaggccaccattcaactctataagagtgaggcattagacttctaacttcttcaaagatga |
5334368 |
T |
|
| Q |
227 |
agaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaa |
295 |
Q |
| |
|
||||||| |||| ||||||||| || | |||||||| |||||||||||| | ||| ||||||| ||||| |
|
|
| T |
5334369 |
agaggggtagagggtagtatcatgtctagaacctggtaacaaagtggaggtcgtttttgttttcgagaa |
5334437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 311
Target Start/End: Complemental strand, 5283405 - 5283251
Alignment:
| Q |
154 |
tgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggggcagagagtagtatcaagtat |
253 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || |||||||| | || || || || ||||||| || ||| ||||||| ||| |||||||||| |
|
|
| T |
5283405 |
tgttagtgaaaaattacacaaaggccaccatccaactctataatagtgatgcattttcctactttgaaaat---gagtggcagagggtaatatcaagtat |
5283309 |
T |
|
| Q |
254 |
tgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag |
311 |
Q |
| |
|
||||| || |||||||||||| | | |||||||||| ||| ||||| |||||||| |
|
|
| T |
5283308 |
cgaaccaggtaacaaagtggaggtcatatttgtttttgaaaacagtttcattgtgaag |
5283251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 450
Target Start/End: Original strand, 5178160 - 5178210
Alignment:
| Q |
400 |
tagtggtgaagaaaatgaatgttttgtcagaaaagcctctcctcaagtggc |
450 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| | ||||||||||||||| |
|
|
| T |
5178160 |
tagtggtgatgaaaatgaatgtgttgtcagaaatgtctctcctcaagtggc |
5178210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 450
Target Start/End: Complemental strand, 5688766 - 5688716
Alignment:
| Q |
400 |
tagtggtgaagaaaatgaatgttttgtcagaaaagcctctcctcaagtggc |
450 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| | ||||||||||||||| |
|
|
| T |
5688766 |
tagtggtgatgaaaatgaatgtgttgtcagaaatgtctctcctcaagtggc |
5688716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 449
Target Start/End: Original strand, 5279991 - 5280040
Alignment:
| Q |
400 |
tagtggtgaagaaaatgaatgttttgtcagaaaagcctctcctcaagtgg |
449 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| | |||||||||||||| |
|
|
| T |
5279991 |
tagtggtgatgaaaatgaatgtgttgtcagaaatgtctctcctcaagtgg |
5280040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 5283513 - 5283431
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaacc |
119 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| | |||||| ||| |||||| | |||||| |||||| ||||| |||||||| |
|
|
| T |
5283513 |
aaggttcttctgtaacttttgatgtccctcaagttgaagggtgtaacttgaagtc---aatgatgtgcattgtctatacttcaacc |
5283431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 482
Target Start/End: Original strand, 5253990 - 5254036
Alignment:
| Q |
436 |
ctctcctcaagtggcacccgtggatgacttaacagataaaagaagga |
482 |
Q |
| |
|
||||||| ||||||| ||| ||||||||||||||||||| ||||||| |
|
|
| T |
5253990 |
ctctcctaaagtggcgcccttggatgacttaacagataacagaagga |
5254036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 5256295 - 5256253
Alignment:
| Q |
154 |
tgttggtgaaaaattacacaaaggccaccattcagctctataa |
196 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || |||||||| |
|
|
| T |
5256295 |
tgttagtgaaaaattacacaaaggccaccatccaactctataa |
5256253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 110; Significance: 5e-55; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 24 - 346
Target Start/End: Complemental strand, 36213232 - 36212912
Alignment:
| Q |
24 |
ttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacgg |
123 |
Q |
| |
|
|||||||| |||||||||||||||| |||||| ||||||| | |||| || |||| || ||||| |||||| || ||| ||||||||||||| | | |
|
|
| T |
36213232 |
ttcaattgcaaaggttcttctgtaatttttgatgtccctcgagtggatggacgtaacttaaagacaataatg---tgtattgtctattcttcaactccag |
36213136 |
T |
|
| Q |
124 |
ataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaaga |
223 |
Q |
| |
|
| ||||||||||| ||||| || | ||| || |||| |||||| |||||||||| ||||||||| ||||||||| |||||| ||| |||| |||||||| |
|
|
| T |
36213135 |
aaaacatagcatcagatggacttaaaaacgtgatggtaaaaaatcacacaaaggctaccattcagatctataagagagaggcattagtctcatttgaaga |
36213036 |
T |
|
| Q |
224 |
tgaagaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtt |
322 |
Q |
| |
|
||| |||||||||||| ||||||||||||| |||||||| | ||| ||||| |||||||||||||||||||| |||| |||||||| |||| | || |
|
|
| T |
36213035 |
tgaggaggggcagagattagtatcaagtatagaacctggtgataaaatggaggttgttgttgtttttgagaacaatttcattgtgaagaagacagcgatt |
36212936 |
T |
|
| Q |
323 |
tatctcatatatgatgaaccaatt |
346 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
36212935 |
tatctcatttatgatgaaccaatt |
36212912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 18936566 - 18936612
Alignment:
| Q |
152 |
tttgttggtgaaaaattacacaaaggccaccattcagctctataaga |
198 |
Q |
| |
|
||||||||||| ||||| ||||||| |||||||||||||||||||| |
|
|
| T |
18936566 |
tttgttggtgataaattgcacaaagaacaccattcagctctataaga |
18936612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 107; Significance: 3e-53; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 34 - 337
Target Start/End: Complemental strand, 47985694 - 47985393
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||| ||| || || ||||| |||||| |||||| ||||| |||||||| | ||| ||||| | |
|
|
| T |
47985694 |
aaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagac---aatgatgtgcattgtctatacttcaacctcagatgacataac |
47985598 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
||| |||||||| | ||| |||| |||| |||| |||||| |||| |||||| |||||||||| ||| | ||||||||||||| |||||| |||||| |
|
|
| T |
47985597 |
atcagatggccttaaaaacgtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggg |
47985498 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
||||||||||||||||||| ||||| || |||||||||||| | ||||||||||||||||| |||||| |||||||| ||| | |||||||||| ||| |
|
|
| T |
47985497 |
gagagagtagtatcaagtatagaacccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtat |
47985398 |
T |
|
| Q |
333 |
atgat |
337 |
Q |
| |
|
||||| |
|
|
| T |
47985397 |
atgat |
47985393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 34 - 337
Target Start/End: Complemental strand, 48004268 - 48003967
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||| ||| || || ||||| |||||| |||||| ||||| |||||||| | ||| ||||| | |
|
|
| T |
48004268 |
aaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagac---aatgatgtgcattgtctatacttcaacctcagatgacataac |
48004172 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
||| |||||||| | ||| |||| |||| |||| |||||| |||| |||||| |||||||||| ||| | ||||||||||||| |||||| |||||| |
|
|
| T |
48004171 |
atcagatggccttaaaaacgtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggg |
48004072 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
||||||||||||||||||| ||||| || |||||||||||| | ||||||||||||||||| |||||| |||||||| ||| | |||||||||| ||| |
|
|
| T |
48004071 |
gagagagtagtatcaagtatagaacccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtat |
48003972 |
T |
|
| Q |
333 |
atgat |
337 |
Q |
| |
|
||||| |
|
|
| T |
48003971 |
atgat |
48003967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 34 - 337
Target Start/End: Complemental strand, 47994981 - 47994680
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||| ||| || || ||||| |||||| |||||| ||||| |||||||| | ||| ||||| | |
|
|
| T |
47994981 |
aaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagac---aatgatgtgcattgtctatacttcaacctcagatgacataac |
47994885 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
||| |||||||| | ||| |||| |||| |||| |||||| |||| |||||| |||||||||| ||| | ||||||||||||| |||||| |||||| |
|
|
| T |
47994884 |
atcagatggccttaaaaacgtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggg |
47994785 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
||||||||||||||||||| ||| | || |||||||||||| | ||||||||||||||||| |||||| |||||||| ||| | |||||||||| ||| |
|
|
| T |
47994784 |
gagagagtagtatcaagtatagaatccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtat |
47994685 |
T |
|
| Q |
333 |
atgat |
337 |
Q |
| |
|
||||| |
|
|
| T |
47994684 |
atgat |
47994680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 34 - 337
Target Start/End: Complemental strand, 48013553 - 48013252
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||| ||| || || ||||| |||||| |||||| ||||| |||||||| | ||| ||||| | |
|
|
| T |
48013553 |
aaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagac---aatgatgtgcattgtctatacttcaacctcagatgacataac |
48013457 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
||| |||||||| | ||| |||| |||| |||| |||||| |||| |||||| |||||||||| ||| | ||||||||||||| |||||| |||||| |
|
|
| T |
48013456 |
atcagatggccttaaaaacgtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggg |
48013357 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
||||||||||||||||||| ||| | || |||||||||||| | ||||||||||||||||| |||||| |||||||| ||| | |||||||||| ||| |
|
|
| T |
48013356 |
gagagagtagtatcaagtatagaatccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtat |
48013257 |
T |
|
| Q |
333 |
atgat |
337 |
Q |
| |
|
||||| |
|
|
| T |
48013256 |
atgat |
48013252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 101; Significance: 1e-49; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 34 - 343
Target Start/End: Complemental strand, 4319603 - 4319296
Alignment:
| Q |
34 |
aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc |
133 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||| |||| |||||||| |||||| |||||| |||||||||||| | | | ||||| | |
|
|
| T |
4319603 |
aaggttcttctgtaatttttgaagtccctcaagtggaaggacgtagcttgaagacaataatg---tgcattgtctattcttcaagcccatacgacataac |
4319507 |
T |
|
| Q |
134 |
atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagagggg |
233 |
Q |
| |
|
||| |||||||| |||| |||| |||| |||| |||||||| |||||||||| |||||||||| ||| || ||| |||||||||| |||| ||| || |
|
|
| T |
4319506 |
atcagatggccttgaaaatgtgttagtgataaatcacacaaagaccaccattcaactctataagagagaagcattatcctcctttgaaaatgaggagtgg |
4319407 |
T |
|
| Q |
234 |
cagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatat |
332 |
Q |
| |
|
|||||||| ||| ||| ||| |||||||| |||| |||||| ||||||| ||||||| |||| ||||| |||||| | |||| ||||||||||||||| |
|
|
| T |
4319406 |
cagagagttgtaacaaatatggaacctggtgacaaggtggagattgttgtcgtttttgggaacagtttcattgtgatgaagacagcagtttatctcatat |
4319307 |
T |
|
| Q |
333 |
atgatgaacca |
343 |
Q |
| |
|
||||||||||| |
|
|
| T |
4319306 |
atgatgaacca |
4319296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 33 - 355
Target Start/End: Complemental strand, 4122946 - 4122626
Alignment:
| Q |
33 |
aaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatag |
132 |
Q |
| |
|
||||||| |||||| |||||||||||||||| ||||||| |||| |||||||| |||||| |||||| ||||||| |||| | | || ||||| |
|
|
| T |
4122946 |
aaaggttattctgttgtttttgaagtccctcaagtggaaggacgtagcttgaagac---aatgatgtgcattgtctattcatcaagcccaaatggcatag |
4122850 |
T |
|
| Q |
133 |
catctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggg |
232 |
Q |
| |
|
|||| | |||||| |||| ||||||||| |||| |||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||| || | |
|
|
| T |
4122849 |
catcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatg |
4122750 |
T |
|
| Q |
233 |
gcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcata |
331 |
Q |
| |
|
| ||||||| ||||||| ||| |||||||| ||||||||||| ||||||||||||||| ||| ||||| |||||| | |||| |||||||||||||| |
|
|
| T |
4122749 |
gaagagagtggtatcaaatatggaacctggtgacaaagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcata |
4122650 |
T |
|
| Q |
332 |
tatgatgaaccaattgctgaaaaa |
355 |
Q |
| |
|
|||||||||||||| | ||||||| |
|
|
| T |
4122649 |
tatgatgaaccaatcggtgaaaaa |
4122626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 33 - 339
Target Start/End: Original strand, 4336895 - 4337199
Alignment:
| Q |
33 |
aaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatag |
132 |
Q |
| |
|
||||||| |||||||| ||||||||||||||| ||||||| |||| |||||||| |||||| |||||| |||||||||||| | | || ||||| |
|
|
| T |
4336895 |
aaaggttattctgtaaattttgaagtccctcatgtggaaggacgtagcttgaagac---aatgatgtgcattgtctattcttcaagcccaaatgacataa |
4336991 |
T |
|
| Q |
133 |
catctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggg |
232 |
Q |
| |
|
|||| |||||||| |||| ||||||||| |||| |||||||| |||||||||| |||| ||||| |||||| ||| ||||| ||| |||| ||| | |
|
|
| T |
4336992 |
catcagatggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctttaagagagaggcattatcgtccttcgaaaatgaggagtg |
4337091 |
T |
|
| Q |
233 |
gcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcata |
331 |
Q |
| |
|
||||||||| ||||||| ||| |||||||| | ||||| ||| ||||||||||||||| |||| ||| |||||| | |||||||||||||||||||| |
|
|
| T |
4337092 |
gcagagagtggtatcaaatatggaacctggtgataaagtcgagattgttgttgtttttgggaacagttatattgtgatgaggacaacagtttatctcata |
4337191 |
T |
|
| Q |
332 |
tatgatga |
339 |
Q |
| |
|
||| |||| |
|
|
| T |
4337192 |
tatcatga |
4337199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 33 - 347
Target Start/End: Original strand, 4362545 - 4362857
Alignment:
| Q |
33 |
aaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatag |
132 |
Q |
| |
|
||||||| |||||||| |||||||||||||||| ||||||| ||| |||||||| |||||| |||||| |||||||||||| | | || ||||| |
|
|
| T |
4362545 |
aaaggttattctgtaatttttgaagtccctcaagtggaaggatgtagcttgaagacaataatg---tgcattgtctattcttcaagcccatatgacataa |
4362641 |
T |
|
| Q |
133 |
catctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggg |
232 |
Q |
| |
|
|||| |||||||| | |||| ||||||||| |||| |||||||| |||||||||| |||||||||| |||||||||| ||||| ||| ||| || | |
|
|
| T |
4362642 |
catcagatggccttagaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcgtccttcgaaaatgcggactg |
4362741 |
T |
|
| Q |
233 |
gcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcata |
331 |
Q |
| |
|
||||||||| |||||| ||| |||||||| ||||||||||| | ||| |||| | | |||| | || |||||| | |||| |||||||||||||| |
|
|
| T |
4362742 |
gcagagagtgatatcaaatatggaacctggtgacaaagtggagatagttattgtaatggtgaacaatgtcattgtgacgaagacagcagtttatctcata |
4362841 |
T |
|
| Q |
332 |
tatgatgaaccaattg |
347 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
4362842 |
tatgatgaaccaattg |
4362857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 138 - 354
Target Start/End: Complemental strand, 4132815 - 4132601
Alignment:
| Q |
138 |
gatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggggcaga |
237 |
Q |
| |
|
|||||||| | |||| ||||||||| |||| |||| ||| | ||||||||||||||||||| |||||| || |||||||||| |||| ||| |||||| |
|
|
| T |
4132815 |
gatggcctaaaaaatgtgttggtgataaatcacacgaagactaccattcagctctataagagagaggcattcgcctcctttgaaaatgaggagtggcaga |
4132716 |
T |
|
| Q |
238 |
gagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag-ggacaacagtttatctcatatatga |
336 |
Q |
| |
|
|||||||||||| ||| |||||||| ||||||| ||| |||||||||||| |||| ||||| |||||| | |||| ||||||||||||||||||| |
|
|
| T |
4132715 |
gagtagtatcaaatatggaacctggtgacaaagtcgag---attgttgtttttgggaacagtttcattgtgatgaagacagcagtttatctcatatatga |
4132619 |
T |
|
| Q |
337 |
tgaaccaattgctgaaaa |
354 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
4132618 |
tgaaccaattggtgaaaa |
4132601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 25568954 - 25569090
Alignment:
| Q |
157 |
tggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttgaagatgaagaggggcagagagtagtatcaagtattga |
256 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||| |||| |||| |||||| ||| | ||||||||| | || |||||||| | ||||||||||||||| || |
|
|
| T |
25568954 |
tggtgaaaaattacaccaagtccaccattcaggtctacaagagagaggcattagtttcctttgaaaacgaggaggggcatatagtagtatcaagtataga |
25569053 |
T |
|
| Q |
257 |
acctggaaacaaagtggagtttgttgttgtttttgag |
293 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
25569054 |
acctggaaacaaagtggaggttgtttttgtttttgag |
25569090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 19 - 347
Target Start/End: Original strand, 4346335 - 4346668
Alignment:
| Q |
19 |
caactttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaac |
118 |
Q |
| |
|
|||||||||| | ||||||| |||||||| ||||||||||||||| ||||||| | || |||||||| |||||| |||||| |||||||||||| |
|
|
| T |
4346335 |
caactttcaactccaaaggttattctgtaatctttgaagtccctcaagtggaaggacatagcttgaagacaataatg---tgcattgtctattcttcaag |
4346431 |
T |
|
| Q |
119 |
cacggataacatagcatctga-------tggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaat |
211 |
Q |
| |
|
| | ||| ||||| |||| || |||||| | |||| ||||||||| |||| |||||||| |||||||||| |||||||||| |||||||||| |
|
|
| T |
4346432 |
cccagatgacataacatcagacatcagatggccttaaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatc |
4346531 |
T |
|
| Q |
212 |
ctcctttgaagatgaagaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtgaag |
311 |
Q |
| |
|
||||||||| || || |||||||| | |||| | ||| |||||||| ||||||||||| | ||||||||| | | |||| | || |||||| | |
|
|
| T |
4346532 |
gtcctttgaaagggaggactggcagagaatgatatcgaatatggaacctggtgacaaagtggagatagttgttgttatggtgaacaatgtcattgtgacg |
4346631 |
T |
|
| Q |
312 |
-ggacaacagtttatctcatatatgatgaaccaattg |
347 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
4346632 |
aagacagcagtttatctcatatatgatgaaccaattg |
4346668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 22583601 - 22583427
Alignment:
| Q |
24 |
ttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacgg |
123 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||| | || ||||||||||||||||| | |||||||| |||||| |||||||||||||| ||| |
|
|
| T |
22583601 |
ttcaattgccaaggttcttctgtaacttttaaagtccctgtagtgaaagggcgtatgttgaagtcaataatgatctgcattgtctattcttcaaccccgg |
22583502 |
T |
|
| Q |
124 |
ataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataaga |
198 |
Q |
| |
|
|||||||| ||| ||||||| ||| ||||||||||||||| | |||||||||||||||||| |||| |||| |
|
|
| T |
22583501 |
ataacataagatccgatggccctacagccttgttggtgaaaaatcatacaaaggccaccattcagttctacaaga |
22583427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 111 - 336
Target Start/End: Complemental strand, 8104 - 7878
Alignment:
| Q |
111 |
tcttcaaccacggataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaa |
210 |
Q |
| |
|
|||||||| ||||||||||| || | ||||| || | |||| |||| |||||||||||||||||||||||||||||| ||||||||| || | ||| |
|
|
| T |
8104 |
tcttcaactgcggataacataacaccagatggtcttaaaaatgtgttagtgaaaaattacacaaaggccaccattcagatctataagagtgaaacattag |
8005 |
T |
|
| Q |
211 |
tctcctttgaagatgaagaggggcagagagtagtatcaagtattgaacctggaaacaaagtggagtttgttgttgtttttgagaacggtttcgttgtg-a |
309 |
Q |
| |
|
|||||| | ||||| || ||||| ||||||||||| | ||||| ||||||||||||||| ||||||||||||||| | |||||||| ||| | | |
|
|
| T |
8004 |
cttcctttaaggatgaggaaaagcagaatttagtatcaagtgtagaacccggaaacaaagtggaggttgttgttgtttttggggacggtttcattgcgaa |
7905 |
T |
|
| Q |
310 |
agggacaacagtttatctcatatatga |
336 |
Q |
| |
|
|| |||||| ||||||| |||||||| |
|
|
| T |
7904 |
agaaacaacaatttatcttatatatga |
7878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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