View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6571_low_25 (Length: 210)
Name: NF6571_low_25
Description: NF6571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6571_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 29051272 - 29051091
Alignment:
| Q |
18 |
agaaagacggagggatggaaaagaaattcttttacgcattgtcccccttaattgctcaacttatcatttcacaccttgtgacaggcatctgtttagcttg |
117 |
Q |
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| T |
29051272 |
agaaagacggagggatggaaaagaaattcttttacgcattgtcccccttaattgctcaacttatcatttcacaccttctgacaggcatatgtttagcttg |
29051173 |
T |
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| Q |
118 |
atagtgcacaaaagataattatataattatattctagtatttgtgagcaattgatgagacctcaagagcgatcacaggttct |
199 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| |
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| T |
29051172 |
atagtgcacaaaagataattatataattatattctactatttgtgagcaattgatgagagctcaagagcgatcactggttct |
29051091 |
T |
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