View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6576_low_13 (Length: 237)
Name: NF6576_low_13
Description: NF6576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6576_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 25689224 - 25689446
Alignment:
| Q |
1 |
tagatccgcctacagtagagaatataaatgttgagaaatgaggagtgataaagctatgttgaaattgttgataatggatgaaatagtaaggactggagtg |
100 |
Q |
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|||||||| | | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
25689224 |
tagatccgtccagagtagagaatataaatattgagaaatgaggagtgataaagctatgttgaaattgttgataatggatgaaatagtaaggacgggagtg |
25689323 |
T |
|
| Q |
101 |
atgtgaatttatccctttgatttttctttttataacataatcaagtaatacacatgattcaaacccataatccaaaataatataagaactgctcctgatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25689324 |
atgtgaatttatccctttgatttttctttttataacataatcaagtaatacacatgattcaaacccataatccaaaataatataagaactgctcctgatt |
25689423 |
T |
|
| Q |
201 |
attacttttcgcaccttatgtgt |
223 |
Q |
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||||||||| ||||||||||||| |
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| T |
25689424 |
attactttttgcaccttatgtgt |
25689446 |
T |
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