View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6577_low_26 (Length: 249)
Name: NF6577_low_26
Description: NF6577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6577_low_26 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 42582055 - 42582298
Alignment:
| Q |
1 |
gcagagacgagtttcatttaagaattattattgcatttttcaatttagtgaattaattacgccttgtttggttggataaatagtttaatttgaagtttat |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42582055 |
gcagagacgagtttcatgtaagaattattattgcatttttcaatttagtgaattaattacgccttgtttggttggataaatagtttaatttgaagtttat |
42582154 |
T |
 |
| Q |
101 |
agcaaatgtataagctaaaagataaaataaagttaaattgtttactaagctggttttattagctatctttgagaactttatgaaaataagctgaaaatag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42582155 |
agcaaatgtataagctaaaagataaaataaagttaaattgtttactaagctggttttattagctatctttgagaactttatgaaaataagctgaaaatag |
42582254 |
T |
 |
| Q |
201 |
ttaatgaacatgtcataaattactgcattcaccatattcttgga |
244 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| || ||||| |
|
|
| T |
42582255 |
ttaatgaacatgtcataaactactgcattcaccattttattgga |
42582298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 3280768 - 3280711
Alignment:
| Q |
161 |
agctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||| || | ||||| ||||||||| |
|
|
| T |
3280768 |
agctatctttgagaactttatgaaaataaactaaaaagagcttatgaagatgtcataa |
3280711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 25461354 - 25461313
Alignment:
| Q |
177 |
tttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
25461354 |
tttatgaaaataagctgaaaacagctaatgaacatgtcataa |
25461313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 4014492 - 4014429
Alignment:
| Q |
146 |
taagctggttttattagctatctttgagaactttatgaaaataagctgaaaatagttaatgaaca |
210 |
Q |
| |
|
||||||| ||| || ||||||||| |||||||| |||||||||||||||||| || | ||||||| |
|
|
| T |
4014492 |
taagctgttttcataagctatcttggagaactt-atgaaaataagctgaaaacagcttatgaaca |
4014429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 17258920 - 17258880
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||||||||||||||||| || | ||||||||||||||| |
|
|
| T |
17258920 |
ttatgaaaataagctgaaaacagcttatgaacatgtcataa |
17258880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 34160745 - 34160796
Alignment:
| Q |
158 |
attagctatctttgagaactttatgaaaataagctgaaaatagttaatgaaca |
210 |
Q |
| |
|
||||| |||||| |||||||| |||||||||||||||||| |||| ||||||| |
|
|
| T |
34160745 |
attagatatcttggagaactt-atgaaaataagctgaaaacagtttatgaaca |
34160796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 2128358 - 2128255
Alignment:
| Q |
117 |
aaaagataaaataaagttaaattg-tttac--taagctggttttattagctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgt |
213 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||| ||| || ||| |||||| ||||| ||||||||||||||||||| || | |||||||||| |
|
|
| T |
2128358 |
aaaagataaaataaagttaaattgttttactgtaagctgttttcataagccatcttttagaac-gtatgaaaataagctgaaaacagcttatgaacatgt |
2128260 |
T |
 |
| Q |
214 |
cataa |
218 |
Q |
| |
|
|||| |
|
|
| T |
2128259 |
tataa |
2128255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 39602278 - 39602207
Alignment:
| Q |
146 |
taagctggttttattagctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||| ||| || |||||||||||||||||| ||||||||||| |||||| | || ||||||||||||||| |
|
|
| T |
39602278 |
taagctgttttcataagctatctttgagaactt-atgaaaataagttgaaaacaatttatgaacatgtcataa |
39602207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 13804787 - 13804850
Alignment:
| Q |
154 |
ttttattagctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||||||||||| |||||||| ||| ||||||||| |||||| || | ||| ||||||||||| |
|
|
| T |
13804787 |
ttttattagctatcgttgagaac-ttaagaaaataagttgaaaacagcttatggacatgtcataa |
13804850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 33120112 - 33120156
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataaatta |
222 |
Q |
| |
|
||||||||||||||| || |||||| |||||| |||||||||||| |
|
|
| T |
33120112 |
ttatgaaaataagctaaagatagtttatgaacttgtcataaatta |
33120156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 33883803 - 33883748
Alignment:
| Q |
161 |
agctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgtcata |
217 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||| | | |||||||||||||| |
|
|
| T |
33883803 |
agctatcttagagaactt-atgaaaataagctgaaaacaacttatgaacatgtcata |
33883748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 52619039 - 52619079
Alignment:
| Q |
181 |
tgaaaataagctgaaaatagttaatgaacatgtcataaatt |
221 |
Q |
| |
|
|||||||||| ||||||||| | |||||||||||||||||| |
|
|
| T |
52619039 |
tgaaaataaggtgaaaatagcttatgaacatgtcataaatt |
52619079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 15784299 - 15784381
Alignment:
| Q |
117 |
aaaagataaaataaagttaaattgtttac---taagctggttttattagctatctttgagaactttatgaaaataagctgaaaa |
197 |
Q |
| |
|
||||| ||||||||||||||||||||| | |||||||||||||| ||||||||| |||||| || |||||||||||| |||| |
|
|
| T |
15784299 |
aaaaggtaaaataaagttaaattgttttcgtataagctggttttataagctatcttggagaac-ttgtgaaaataagctaaaaa |
15784381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 1510003 - 1509962
Alignment:
| Q |
177 |
tttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
1510003 |
tttatgaaaataagctgaaaacagctaatgaacatgtcataa |
1509962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 27820402 - 27820342
Alignment:
| Q |
149 |
gctggttttattagctatctttgagaactttatgaaaataagctgaaaatagttaatgaaca |
210 |
Q |
| |
|
|||| |||||| ||||||||| ||||| |||||||||||||||||||||||| | ||||||| |
|
|
| T |
27820402 |
gctgtttttataagctatcttggagaa-tttatgaaaataagctgaaaatagcttatgaaca |
27820342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 7137066 - 7136995
Alignment:
| Q |
146 |
taagctggttttattagctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||| ||| || ||||||||| |||||||| |||||||||||||||||||| | ||||| ||||||||| |
|
|
| T |
7137066 |
taagctgttttcataagctatcttggagaactt-atgaaaataagctgaaaataacttatgaatatgtcataa |
7136995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 218
Target Start/End: Original strand, 10744271 - 10744374
Alignment:
| Q |
117 |
aaaagataaaataaagttaaattgtttac---taagctggttttattagctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgt |
213 |
Q |
| |
|
|||||||||||||||||| |||||||| | ||||||| ||| || |||| |||| |||||| |||| |||||||| |||||| || | ||||||||| |
|
|
| T |
10744271 |
aaaagataaaataaagttgaattgttttcctataagctgttttcataagctgtcttagagaac-ttataaaaataagatgaaaacagcttatgaacatgc |
10744369 |
T |
 |
| Q |
214 |
cataa |
218 |
Q |
| |
|
||||| |
|
|
| T |
10744370 |
cataa |
10744374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 51695548 - 51695500
Alignment:
| Q |
161 |
agctatctttgagaactttatgaaaataagctgaaaatagttaatgaaca |
210 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||| | ||||||| |
|
|
| T |
51695548 |
agctatcttggagaa-tttatgaaaataagctgaaaatagcttatgaaca |
51695500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 6292526 - 6292566
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||||||||||||||||| || | ||||||||||||||| |
|
|
| T |
6292526 |
ttatgaaaataagctgaaaacagcttatgaacatgtcataa |
6292566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 25479614 - 25479654
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
25479614 |
ttatgaaaataagctgaaaacaactaatgaacatgtcataa |
25479654 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 30815690 - 30815650
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||||||||||||||||| | || ||||||||||||||| |
|
|
| T |
30815690 |
ttatgaaaataagctgaaaacattttatgaacatgtcataa |
30815650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 33975603 - 33975643
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| |||||| |
|
|
| T |
33975603 |
ttatgaaaataagctgaaaatagtttatggacatatcataa |
33975643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 37593721 - 37593681
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||||||||||||||||| || | ||||||||||||||| |
|
|
| T |
37593721 |
ttatgaaaataagctgaaaacagcttatgaacatgtcataa |
37593681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 43338149 - 43338189
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||||||| ||||||||||| | ||||||||||||||| |
|
|
| T |
43338149 |
ttatgaaaataggctgaaaatagattatgaacatgtcataa |
43338189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 825543 - 825487
Alignment:
| Q |
161 |
agctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||| || |||||||| |||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
825543 |
agctattttggagaactt-atgaaaataagctgaaaacagttaatgagcatgtcataa |
825487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 21653095 - 21653154
Alignment:
| Q |
158 |
attagctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||||||||| |||| ||| ||||||||||||||||||||| | |||||| |||||||| |
|
|
| T |
21653095 |
attagctatcttggagagctt-atgaaaataagctgaaaatagcttatgaacgtgtcataa |
21653154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 43368735 - 43368697
Alignment:
| Q |
180 |
atgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
43368735 |
atgaaaataagttgaaaatagctaatgaacatgtcataa |
43368697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 37353225 - 37353188
Alignment:
| Q |
181 |
tgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
37353225 |
tgaaaataagctgaaaatagtttatgaatatgtcataa |
37353188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 37353302 - 37353246
Alignment:
| Q |
161 |
agctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||||||||||| ||| |||||||||| ||||||| |||| ||||| ||||||||| |
|
|
| T |
37353302 |
agctatctttgagagctt-atgaaaataatctgaaaacagtttatgaatatgtcataa |
37353246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 11121807 - 11121847
Alignment:
| Q |
177 |
tttatgaaaataagctgaaaatagttaatgaacatgtcata |
217 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| ||||||||| |
|
|
| T |
11121807 |
tttatggaaataagctgaaaatagataatgatcatgtcata |
11121847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 20672783 - 20672823
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
|||||||||||||||||||| || | ||||||||||||||| |
|
|
| T |
20672783 |
ttatgaaaataagctgaaaacagcttatgaacatgtcataa |
20672823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 17770491 - 17770451
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
17770491 |
ttatgaaaataagttgaaaatagtttatgaacatgtcataa |
17770451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 837272 - 837233
Alignment:
| Q |
158 |
attagctatctttgagaactttatgaaaataagctgaaaat |
198 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
837272 |
attagctatcttggagaactt-atgaaaataagctgaaaat |
837233 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 9595291 - 9595331
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
9595291 |
ttatgaaaataagctgaaaatagttcatggacatgtcataa |
9595331 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 20952365 - 20952418
Alignment:
| Q |
154 |
ttttattagctatctttgagaactttatgaaaataagctgaaaatagttaatgaa |
208 |
Q |
| |
|
||||||||||||| || |||||||| ||||||||||| |||||| |||||||||| |
|
|
| T |
20952365 |
ttttattagctatattggagaactt-atgaaaataagttgaaaaaagttaatgaa |
20952418 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 43985040 - 43985007
Alignment:
| Q |
178 |
ttatgaaaataagctgaaaatagttaatgaacat |
211 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |
|
|
| T |
43985040 |
ttatgaaaataagctgaaaatagataatgaacat |
43985007 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 18179308 - 18179241
Alignment:
| Q |
146 |
taagctggttttattagctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgtc |
214 |
Q |
| |
|
||||||| ||| || ||||||| | |||||||| | ||||||||||||||||||| ||||| ||||||| |
|
|
| T |
18179308 |
taagctgctttcataagctatcctggagaactt-acgaaaataagctgaaaatagctaatggacatgtc |
18179241 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 29316843 - 29316772
Alignment:
| Q |
146 |
taagctggttttattagctatctttgagaactttatgaaaataagctgaaaatagttaatgaacatgtcataa |
218 |
Q |
| |
|
||||||| ||| || ||||||||| |||||||| ||| |||||||||||||| | | ||||||||||||||| |
|
|
| T |
29316843 |
taagctgttttcatcagctatcttggagaactt-atggaaataagctgaaaagaacttatgaacatgtcataa |
29316772 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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