View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6579_high_14 (Length: 389)
Name: NF6579_high_14
Description: NF6579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6579_high_14 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 75 - 389
Target Start/End: Complemental strand, 41509554 - 41509234
Alignment:
| Q |
75 |
gagtgatgacaacgggttctagaagaatatctatatctaatgaatggtgatgtaagagcatatgcaatgaacattgaatcatattaggaaagtagtgatg |
174 |
Q |
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| T |
41509554 |
gagtgatgacaacgggttctagaagaatatctatatctaatgaatggtgatgtaagagcatatgcaatgaacattgaatcatgttaggaaagtagtgatg |
41509455 |
T |
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| Q |
175 |
gtatgcaatactgcaatacatggatatat-cat-----ataggtctagaatcatgtgaataacacgtagcatgcttttaatgatgaccacaaattctctt |
268 |
Q |
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| T |
41509454 |
gtatgcaatactacaatgcatggatatatgcatggagtataggtctagaatcatgtgaatcacacgtagcatgctttttatgatgaccacaaattctctt |
41509355 |
T |
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| Q |
269 |
ctaagacgcaaacaaaaaagtgagaaggaagtgacgtgaagattcaattacagtatggcaggagagtcagaatggaaactactcatgcccacttgtttac |
368 |
Q |
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| T |
41509354 |
ctaagacgcaaacaaaaaagtgagaaggaagtgacgtgaagattcaattatagtatggcaggagtcagaaaatggaaacgactcatgcccacttgtttac |
41509255 |
T |
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| Q |
369 |
ctgaataaattcttgcatgac |
389 |
Q |
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| T |
41509254 |
ctgaataaattcttgcatgac |
41509234 |
T |
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