View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6583_low_1 (Length: 672)

Name: NF6583_low_1
Description: NF6583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6583_low_1
NF6583_low_1
[»] chr3 (39 HSPs)
chr3 (13-421)||(30159191-30159602)
chr3 (49-421)||(9156920-9157297)
chr3 (13-316)||(11635637-11635934)
chr3 (17-338)||(10961924-10962251)
chr3 (17-338)||(10965433-10965760)
chr3 (48-338)||(22994804-22995091)
chr3 (26-322)||(19302553-19302850)
chr3 (21-215)||(10883639-10883832)
chr3 (49-215)||(55032849-55033015)
chr3 (17-305)||(18541344-18541631)
chr3 (429-574)||(30159024-30159169)
chr3 (49-215)||(36533910-36534077)
chr3 (49-215)||(24127688-24127853)
chr3 (49-210)||(7832417-7832579)
chr3 (51-241)||(15196410-15196601)
chr3 (68-215)||(13558558-13558704)
chr3 (49-215)||(2777638-2777804)
chr3 (49-215)||(47053584-47053750)
chr3 (49-216)||(28329520-28329686)
chr3 (113-217)||(12541300-12541405)
chr3 (49-147)||(3839481-3839579)
chr3 (429-499)||(24127985-24128055)
chr3 (429-563)||(2777872-2778007)
chr3 (156-215)||(22026383-22026442)
chr3 (429-574)||(9157354-9157500)
chr3 (429-499)||(28329819-28329889)
chr3 (429-563)||(3839647-3839782)
chr3 (429-563)||(10883875-10884010)
chr3 (429-499)||(15196206-15196275)
chr3 (429-499)||(19302371-19302441)
chr3 (429-499)||(47053883-47053953)
chr3 (429-526)||(22994601-22994698)
chr3 (379-418)||(10961845-10961884)
chr3 (379-418)||(10965354-10965393)
chr3 (429-524)||(11636006-11636101)
chr3 (429-574)||(18541657-18541800)
chr3 (106-150)||(17140628-17140672)
chr3 (379-418)||(22995128-22995167)
chr3 (107-179)||(20290022-20290093)
[»] chr5 (19 HSPs)
chr5 (13-403)||(30763413-30763803)
chr5 (17-421)||(2455408-2455810)
chr5 (49-421)||(26550216-26550595)
chr5 (49-421)||(28563535-28563916)
chr5 (13-421)||(19688162-19688578)
chr5 (429-574)||(30763825-30763970)
chr5 (49-215)||(22938266-22938432)
chr5 (49-207)||(34134086-34134245)
chr5 (13-217)||(2837867-2838072)
chr5 (429-574)||(19688600-19688742)
chr5 (429-563)||(26550665-26550800)
chr5 (429-574)||(2455836-2455982)
chr5 (429-563)||(28563330-28563465)
chr5 (260-336)||(35382070-35382145)
chr5 (429-496)||(22938063-22938130)
chr5 (429-499)||(26292008-26292078)
chr5 (106-152)||(34489295-34489341)
chr5 (429-563)||(2837698-2837833)
chr5 (106-152)||(24262487-24262533)
[»] scaffold0134 (2 HSPs)
scaffold0134 (17-421)||(9125-9531)
scaffold0134 (429-574)||(9557-9703)
[»] scaffold0014 (2 HSPs)
scaffold0014 (17-421)||(225881-226286)
scaffold0014 (422-504)||(226383-226464)
[»] chr8 (24 HSPs)
chr8 (17-421)||(31983523-31983928)
chr8 (13-336)||(22223506-22223828)
chr8 (13-336)||(22229848-22230170)
chr8 (49-217)||(38249571-38249739)
chr8 (49-215)||(8910484-8910650)
chr8 (49-210)||(17929857-17930019)
chr8 (49-215)||(23645900-23646066)
chr8 (49-207)||(23945029-23945187)
chr8 (49-207)||(12585103-12585261)
chr8 (21-215)||(22175075-22175268)
chr8 (49-215)||(33878449-33878614)
chr8 (49-215)||(25592711-25592877)
chr8 (429-573)||(22223338-22223483)
chr8 (429-573)||(22229680-22229825)
chr8 (422-504)||(31984025-31984106)
chr8 (429-574)||(17930076-17930222)
chr8 (429-499)||(33878246-33878316)
chr8 (429-563)||(23646134-23646269)
chr8 (440-499)||(25592519-25592578)
chr8 (429-499)||(5827076-5827145)
chr8 (433-499)||(8910784-8910850)
chr8 (106-154)||(13833190-13833238)
chr8 (429-499)||(22174899-22174969)
chr8 (106-154)||(17970941-17970989)
[»] chr2 (19 HSPs)
chr2 (49-421)||(11058430-11058817)
chr2 (49-215)||(1504528-1504694)
chr2 (49-215)||(45455923-45456089)
chr2 (49-215)||(13973024-13973190)
chr2 (49-215)||(31428648-31428814)
chr2 (52-215)||(25872826-25872989)
chr2 (49-215)||(9186554-9186719)
chr2 (49-217)||(24237174-24237343)
chr2 (49-217)||(25957574-25957745)
chr2 (429-563)||(25957371-25957506)
chr2 (429-563)||(31428445-31428580)
chr2 (429-563)||(9186351-9186486)
chr2 (429-563)||(11058887-11059022)
chr2 (429-499)||(24237476-24237546)
chr2 (429-563)||(1504326-1504460)
chr2 (429-563)||(25873060-25873195)
chr2 (433-499)||(13972825-13972891)
chr2 (440-510)||(11187187-11187258)
chr2 (429-499)||(45456222-45456292)
[»] chr4 (26 HSPs)
chr4 (46-338)||(26061020-26061312)
chr4 (13-336)||(53894970-53895291)
chr4 (30-322)||(15162912-15163205)
chr4 (13-215)||(39500506-39500708)
chr4 (49-215)||(27678177-27678343)
chr4 (49-215)||(56197652-56197818)
chr4 (49-217)||(3799007-3799175)
chr4 (49-217)||(19861498-19861667)
chr4 (49-217)||(33411173-33411342)
chr4 (49-206)||(49637709-49637865)
chr4 (50-188)||(15430978-15431116)
chr4 (50-188)||(15437592-15437730)
chr4 (429-524)||(19826598-19826693)
chr4 (429-563)||(19861295-19861430)
chr4 (429-563)||(56197886-56198021)
chr4 (429-563)||(3798804-3798939)
chr4 (429-499)||(49637505-49637575)
chr4 (429-499)||(15430774-15430844)
chr4 (429-499)||(15437388-15437458)
chr4 (429-524)||(15163295-15163390)
chr4 (429-563)||(27677974-27678109)
chr4 (447-526)||(39500781-39500860)
chr4 (429-499)||(33410970-33411040)
chr4 (49-118)||(19826421-19826490)
chr4 (37-97)||(22090955-22091015)
chr4 (379-418)||(53894882-53894921)
[»] scaffold0002 (1 HSPs)
scaffold0002 (13-344)||(99364-99692)
[»] chr6 (21 HSPs)
chr6 (43-330)||(32111747-32112034)
chr6 (17-334)||(21633056-21633371)
chr6 (13-217)||(12981361-12981566)
chr6 (22-322)||(11126791-11127090)
chr6 (49-206)||(12745581-12745738)
chr6 (17-206)||(14968413-14968603)
chr6 (49-217)||(25456227-25456396)
chr6 (49-215)||(23380025-23380191)
chr6 (51-217)||(24409148-24409314)
chr6 (49-215)||(22300890-22301056)
chr6 (50-189)||(28108879-28109023)
chr6 (422-532)||(21633440-21633550)
chr6 (429-563)||(12745806-12745941)
chr6 (43-117)||(7836889-7836963)
chr6 (429-574)||(14968629-14968775)
chr6 (429-499)||(23379822-23379892)
chr6 (159-206)||(7836819-7836866)
chr6 (429-563)||(11126613-11126748)
chr6 (429-563)||(24409383-24409518)
chr6 (379-418)||(25978724-25978763)
chr6 (379-418)||(21632957-21632996)
[»] chr7 (15 HSPs)
chr7 (16-327)||(13810586-13810894)
chr7 (163-421)||(16222638-16222904)
chr7 (21-215)||(45288322-45288515)
chr7 (26-219)||(9274224-9274417)
chr7 (49-215)||(4544555-4544720)
chr7 (49-206)||(20595529-20595687)
chr7 (49-216)||(22256077-22256244)
chr7 (429-563)||(22256312-22256447)
chr7 (429-563)||(45288146-45288281)
chr7 (433-562)||(9274046-9274176)
chr7 (429-499)||(20595822-20595892)
chr7 (429-499)||(26137048-26137118)
chr7 (475-563)||(13810460-13810549)
chr7 (49-98)||(26137252-26137301)
chr7 (263-322)||(9274462-9274520)
[»] chr1 (8 HSPs)
chr1 (22-323)||(49718337-49718640)
chr1 (13-205)||(22454492-22454685)
chr1 (49-215)||(21019577-21019743)
chr1 (49-207)||(45940252-45940410)
chr1 (49-215)||(13640221-13640387)
chr1 (429-563)||(45940478-45940613)
chr1 (429-563)||(49718683-49718818)
chr1 (429-499)||(21019375-21019445)
[»] scaffold0321 (2 HSPs)
scaffold0321 (49-215)||(4059-4225)
scaffold0321 (429-526)||(3855-3952)
[»] scaffold0214 (4 HSPs)
scaffold0214 (49-216)||(12307-12473)
scaffold0214 (49-216)||(26323-26489)
scaffold0214 (429-563)||(12543-12678)
scaffold0214 (429-563)||(26559-26694)
[»] scaffold0126 (2 HSPs)
scaffold0126 (51-208)||(786-943)
scaffold0126 (429-524)||(581-676)
[»] scaffold0083 (2 HSPs)
scaffold0083 (49-322)||(27967-28239)
scaffold0083 (432-564)||(28304-28437)
[»] scaffold0048 (4 HSPs)
scaffold0048 (49-207)||(27901-28060)
scaffold0048 (49-133)||(23739-23824)
scaffold0048 (429-466)||(28228-28265)
scaffold0048 (161-217)||(23686-23741)
[»] scaffold0270 (2 HSPs)
scaffold0270 (49-215)||(1275-1441)
scaffold0270 (429-563)||(1068-1203)
[»] scaffold0360 (3 HSPs)
scaffold0360 (429-574)||(1493-1635)
scaffold0360 (366-421)||(4543-4598)
scaffold0360 (16-65)||(1419-1468)
[»] scaffold0034 (1 HSPs)
scaffold0034 (40-206)||(49523-49689)
[»] scaffold0084 (2 HSPs)
scaffold0084 (24-217)||(28202-28392)
scaffold0084 (429-499)||(28500-28570)
[»] scaffold0037 (2 HSPs)
scaffold0037 (108-216)||(96182-96290)
scaffold0037 (49-90)||(96139-96180)
[»] scaffold1785 (1 HSPs)
scaffold1785 (108-216)||(468-575)
[»] scaffold0035 (1 HSPs)
scaffold0035 (108-216)||(63078-63185)
[»] scaffold0049 (1 HSPs)
scaffold0049 (107-176)||(39955-40024)
[»] scaffold0718 (1 HSPs)
scaffold0718 (107-154)||(1791-1839)
[»] scaffold0233 (1 HSPs)
scaffold0233 (440-504)||(9056-9120)


Alignment Details
Target: chr3 (Bit Score: 339; Significance: 0; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 13 - 421
Target Start/End: Original strand, 30159191 - 30159602
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  30159191 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 30159290  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaat 212  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30159291 tttgaggtctttcagggttataacgaggtttaggttaaggtgagataatatttggataagtaggctacacaaaatttgagttaggcattcctacggaaat 30159390  T
Q  213 taaagaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaatta 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  30159391 taaagaatggattcaattcctcattcaccccttgaaataacaatttgtaaaggtactagagaatatttgtaactttttaggacaatcgggtttaaaatta 30159490  T
Q  313 ctcagatttttcattgtttgtcccttgctttttattc---nnnnnnnnnatacaccattttgagtttgagtgtatatttttcatgatttgttctttgttc 409  Q
    |||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30159491 ctcagatttttcattgtttgtcccttgctttttattctttttttttttgatacaccattttgagtttgagtgtatatttttcatgatttgttctttgttc 30159590  T
Q  410 tctagtacctcc 421  Q
    ||||||||||||    
T  30159591 tctagtacctcc 30159602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 49 - 421
Target Start/End: Complemental strand, 9157297 - 9156920
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| ||||||     
T  9157297 tctacatattaccatacgcttgaaaaatttctaaatgtcaatcaaaatcaatgtcattacacactttgatgtctttaagggttataacggggcttaggta 9157198  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaagaatggattcaattcctcattcaccccttgaa 248  Q
    |||| | ||||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||| |  |||||||| || ||||||  |||||||    
T  9157197 aaggcgggataatatttggataagtaggctacacaaaatttgagttaggcactcctacataaattaaagcaaagattcaatcccacattcaaaccttgaa 9157098  T
Q  249 ataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttttcattgtttgtcccttgctttttatt 348  Q
    | ||| |||| ||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||    
T  9157097 acaaccatttgtaaaggtactagagattatttgtaacttgttgggacaatcgagtttaaagttactcagatttttctttgtttgtcccttgcttttcatt 9156998  T
Q  349 c-----nnnnnnnnnatacaccattttgagtttgagtgtatatttttcatgatttgttctttgttctctagtacctcc 421  Q
    |              |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  9156997 ctctttttttttttgatacaccattttgattttgagtgtatatttttcatgatttgttctttattctctagtacctcc 9156920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 13 - 316
Target Start/End: Complemental strand, 11635934 - 11635637
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  11635934 aatatgataagggttcacacacaatcaacgtgcaagtctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcattacacac 11635835  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaat 212  Q
    |||||||| ||| || ||||||||| || |||||| ||| || |||| |||||||||||      | |||||||||||||||||||| ||||||||||||    
T  11635834 tttgaggtatttaagagttataacgaggcttaggtaaagatgggatattatttggataa------tacacaaaatttgagttaggcactcctacggaaat 11635741  T
Q  213 taaagaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaatta 312  Q
    ||||  ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||  |||||||||||||||||||| |||    
T  11635740 taaatcatggattcaatccctcattcaccccttgaaacaacaatttgtaaaggtactagagaatatttgtaactagttgggacaatcgagtttaaagtta 11635641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 17 - 338
Target Start/End: Complemental strand, 10962251 - 10961924
Alignment:
Q  17 tgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttg 116  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10962251 tgataaaggttcacacacaatcaacatgcaggtctacatattatcatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcattacacactttg 10962152  T
Q  117 aggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa- 215  Q
    |||||||  ||| ||||||||||| |||||| ||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||     
T  10962151 aggtcttaaaggattataacggggcttaggtgaaggtggaataatatttggataagtaggctacacaaaatttgagttaggcattcatacggaagttaag 10962052  T
Q  216 ---agaatggattcaattcctcattcaccccttgaaataacaat--ttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaat 310  Q
       | |||  | || ||   |||||||||  ||| || ||||||  ||  || ||||||||| | |||||||||||| |||||||||||||||||  |||    
T  10962051 cacaaaattcaatccatcattcattcaccttttggaacaacaattcttgcaagggtactagagattatttgtaacttattgggacaatcgagtttggaat 10961952  T
Q  311 tactcagatttttcattgtttgtccctt 338  Q
    ||||||||||||||| ||||||||||||    
T  10961951 tactcagatttttcaatgtttgtccctt 10961924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 17 - 338
Target Start/End: Complemental strand, 10965760 - 10965433
Alignment:
Q  17 tgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttg 116  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10965760 tgataaaggttcacacacaatcaacatgcaggtctacatattatcatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcattacacactttg 10965661  T
Q  117 aggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa- 215  Q
    |||||||  ||| ||||||||||| |||||| ||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||     
T  10965660 aggtcttaaaggattataacggggcttaggtgaaggtggaataatatttggataagtaggctacacaaaatttgagttaggcattcatacggaagttaag 10965561  T
Q  216 ---agaatggattcaattcctcattcaccccttgaaataacaat--ttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaat 310  Q
       | |||  | || ||   |||||||||  ||| || ||||||  ||  || ||||||||| | |||||||||||| |||||||||||||||||  |||    
T  10965560 cacaaaattcaatccatcattcattcaccttttggaacaacaattcttgcaagggtactagagattatttgtaacttattgggacaatcgagtttggaat 10965461  T
Q  311 tactcagatttttcattgtttgtccctt 338  Q
    ||||||||||||||| ||||||||||||    
T  10965460 tactcagatttttcaatgtttgtccctt 10965433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 48 - 338
Target Start/End: Original strand, 22994804 - 22995091
Alignment:
Q  48 gtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggt 147  Q
    ||||||||||||||| ||  |||||||||||||||| | ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  22994804 gtctacatattaccaaacgcttgaaaagtttctaaatgccaatcaaaaccaatgtcattacacactttgaggtcttttagggttataacggggcttaggt 22994903  T
Q  148 taaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaagaatggattcaattcctcattcaccccttga 247  Q
     |||||| ||||||||||||||||||||||| ||||||||||||| | |||| |||||||||  | ||| |  |   ||| | |||||||||||| ||||    
T  22994904 aaaggtgggataatatttggataagtaggctacacaaaatttgaggtcggcactcctacggatttgaaacacag--atcattccctcattcaccctttga 22995001  T
Q  248 aataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttttcattgtttgtccctt 338  Q
    || ||| |||| | ||||||||||| |||| ||||||||| ||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  22995002 aacaac-attttttaaggtactagagaatacttgtaacttgttgggacaatcgagtttgaagttactcagatttttcattgcttgtccctt 22995091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 26 - 322
Target Start/End: Original strand, 19302553 - 19302850
Alignment:
Q  26 ttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttc 125  Q
    ||||||| ||||| || |||||||||||||||||| ||| | ||||| | ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  19302553 ttcacacacaatcgacatgcaggtctacatattacgatagacttgaagattttctaaacgtcaatcaaagtcaatatcactacacactttgaggtctttc 19302652  T
Q  126 agggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaag-aatggat 224  Q
    | ||||||||||||| |||||| |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||| |    ||    
T  19302653 aaggttataacggggcttaggtgaaggtgggataatatttgaataagtaggctacacaaaatttgagttaggcattcctacggaagttaaagcacaaaat 19302752  T
Q  225 tcaattcctcattcaccccttg--aaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttt 322  Q
    ||||| |||| ||| ||| |||  | || | || || ||||||||||||| |||| ||||||| | |||||||||||||||||||| |||||| ||||||    
T  19302753 tcaatccctc-ttccccctttggaacatcaaaacttgtaaaggtactagagaatacttgtaac-tgttgggacaatcgagtttaaagttactcggatttt 19302850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 10883832 - 10883639
Alignment:
Q  21 aagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggt 120  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | |||||||||||||    
T  10883832 aagggttcacacacaatcgacatgcaa-tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggt 10883734  T
Q  121 ctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||  ||||||||||||||| |||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  10883733 cttaaagggttataacggggcttaggtgaagatgggataatatttggataagtaggctacacaaaatttgagttaggcattcctacggaatttaa 10883639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 55032849 - 55033015
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| ||||||     
T  55032849 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacggggcttaggtg 55032948  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  55032949 aaggtgggataatatttcgataagtaggctacacaaaatttgagttaggcattcctacggaagttaa 55033015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 17 - 305
Target Start/End: Complemental strand, 18541631 - 18541344
Alignment:
Q  17 tgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttg 116  Q
    ||||||||||||||||  | || || |||||||||||||||||||||||| ||||||| |||||||| || ||||||| || || |||||| |||||||     
T  18541631 tgataagggttcacac--agtcgacatgcaggtctacatattaccatacacttgaaaattttctaaatgttaatcaaagtccatgtcattagacacttta 18541534  T
Q  117 aggtc-tttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    ||||| |||  ||||||||| |||| |||||| ||| || |||||||||||||||||| ||||||||||||||| ||||| ||| ||||||| || || |    
T  18541533 aggtctttttggggttataatggggcttaggtaaagctgggataatatttggataagttggctgcacaaaatttaagttatgcactcctacgaaatttta 18541434  T
Q  216 agaatggattcaat-tcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagttt 305  Q
    |  |  ||||||||  ||||||||| ||||||||| |||||||||||||||||||||| || |||||||| || |||||||||||||||||    
T  18541433 aacacagattcaatcccctcattca-cccttgaaacaacaatttataaaggtactagagaacatttgtaatttattgggacaatcgagttt 18541344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 429 - 574
Target Start/End: Original strand, 30159024 - 30159169
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  |||||||||||||||||||||||||||   ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  30159024 aaacttgaatcattccttgtcctcaaggaattcacttgcgacattgacaatcgacagtaaaataacaattacctaaccaagtagtagtatccaaaagttc 30159123  T
Q  529 atcttcctctagccaatgatgagctagtttgactttcatgcatcca 574  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  30159124 atcttcctctagccaatgatgagctagtttgactttcatgcatcca 30159169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 36533910 - 36534077
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| ||||||     
T  36533910 tctacatattaccatacacttaaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacggggcttaggtg 36534009  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||    
T  36534010 aaggtgggataatatttggataagcaggctacacaaaattttgagttaggcattcctacggaagttaa 36534077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 24127853 - 24127688
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  24127853 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacggggcttaggtg 24127754  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  24127753 aaggtgggat-atatttggataagtaggctacacaaaatttgagttaggcattcctacagaagttaa 24127688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 49 - 210
Target Start/End: Complemental strand, 7832579 - 7832417
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| ||||||     
T  7832579 tctacatactaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacggggcttaggta 7832480  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctacggaa 210  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  7832479 aaggtgggataatatttggataagtaggctacacaaaattttgagttaggcactcctacggaa 7832417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 15196410 - 15196601
Alignment:
Q  51 tacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggttaa 150  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | |||||||||| |||||| | ||||||||||||| |||||| ||    
T  15196410 tacatattaccatatgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgatgtctttaatggttataacggggcttaggtgaa 15196509  T
Q  151 ggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctacggaaattaaagaatggattcaattcctcattcacc 241  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| |||||  ||  ||||||| | |||||||||    
T  15196510 ggtgggataatatttggataagtaggctacacaaaattttgagttaggcactcctacggaagttaaaacataaattcaatccatcattcacc 15196601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 68 - 215
Target Start/End: Complemental strand, 13558704 - 13558558
Alignment:
Q  68 ttgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttgg 167  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| |||||| |||||| ||| ||||||||    
T  13558704 ttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacggggcttaggtgaaggtgggat-atatttgg 13558606  T
Q  168 ataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||| ||||    
T  13558605 ataagtaggctacacaaaatttgagttagacattcctacagaagttaa 13558558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 2777804 - 2777638
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   |||||||||||||| |||||||||||||||||| ||| | |||||||||| |||||  ||||||||||||||| ||||||     
T  2777804 tctacatattaccataagcttgaaaagtttctagacgtcaatcaaaatcaatgtcaatgcacactttgatgtcttaaagggttataacggggcttaggtg 2777705  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||||||||| ||||||||||||  |||||| |||||||||| ||||    
T  2777704 aaggtgggataatatttggataagtaggctacacaaaatttgaagtaggcactcctacggaagttaa 2777638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 47053750 - 47053584
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  || ||||||| |||||||||||||||||||||| | | | ||||||||||||||||  ||||||||||||||| ||||||     
T  47053750 tctacatattaccatacgctttaaaagttgctaaacgtcaatcaaaatcaatgttaatgcacactttgaggtcttaaagggttataacggggcttaggtg 47053651  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||  ||||||| ||||    
T  47053650 aaggtgggataatatttgaataagtaggctacacaaaatttgagttaggcattgatacggaagttaa 47053584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 49 - 216
Target Start/End: Complemental strand, 28329686 - 28329520
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||| ||||||||||||||| ||| | ||||| ||||||||||  |||||||||| |||| ||||||     
T  28329686 tctacatattaccataagcttgaaaagtttctaaacatcaatcaaaatcaatgtcaatgcacaccttgaggtcttaaagggttataatggggcttaggtg 28329587  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaa 216  Q
    ||| || ||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||    
T  28329586 aagttgggat-atatttggataagtaggctacacaaaatttgagttaggcactcctacggaagttaaa 28329520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 12541300 - 12541405
Alignment:
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataat-atttggataagtaggctgcacaaaatttgagttaggcattcctacggaaa 211  Q
    |||||||||||| ||||||||||||||| |||||| |||||| |||| | ||||||||||||||||| |||||||||||||||||||| ||||||| ||     
T  12541300 tttgaggtctttaagggttataacggggcttaggtgaaggtgggatatttatttggataagtaggctacacaaaatttgagttaggcactcctacgaaag 12541399  T
Q  212 ttaaag 217  Q
    ||||||    
T  12541400 ttaaag 12541405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 3839579 - 3839481
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggt 147  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| |  |||||||||||||||  || |||||||||| | ||||||    
T  3839579 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgaacactttgaggtcttaaagagttataacggagcttaggt 3839481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 429 - 499
Target Start/End: Complemental strand, 24128055 - 24127985
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||||||||||||||||||||||||| |||||||  || ||||||||||||||||||||||||||    
T  24128055 aaacttgaactattccttgtcctcaaggaatttacttgtaatattgacaatcgacagtaaaataacaatta 24127985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 2778007 - 2777872
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||||||||||||||||||||||||| |||||||  || |||||| ||||||||||||||||||| || | ||||   ||||| |||||||| |    
T  2778007 aaacttgaactattccttgtcctcaaggaatttacttgtaatattgacaattgacagtaaaataacaattacctgatcaagcgatagtaaccaaaagttc 2777908  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  2777907 aacaccttactagctaaagatgagctagtttgactt 2777872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 22026442 - 22026383
Alignment:
Q  156 gataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  22026442 gataatatttggataagtaggctacacaaaatttgagttaggcattcctacggaagttaa 22026383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 9157500 - 9157354
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| |||| |||||||||||||||| ||||| |  || |||||||||||||||||||||||||| || | ||||   ||||| |||||||| |    
T  9157500 aaacttgaaccattctttgtcctcaaggaatttacttgcaaaattgacaatcgacagtaaaataacaattacctgatcaagcgatagtacccaaaagttc 9157401  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactttcatgcatcca 574  Q
    | || | | ||||| || ||||||||||||||||||| | |||||||    
T  9157400 aactccttactagctaaagatgagctagtttgacttttaagcatcca 9157354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 429 - 499
Target Start/End: Complemental strand, 28329889 - 28329819
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    ||||||||| |||||||||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||    
T  28329889 aaacttgaattattccttgtcctcaaggaatttacttgcatcattgacaatcgacagtaaaataacaatta 28329819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 3839782 - 3839647
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| ||||||||||||||||||||| ||||| |  || || ||| ||||||||||||||||||| || | |||||  |||||||||||||| |    
T  3839782 aaacttgaacaattccttgtcctcaaggaatttacttgcaatattgaaaattgacagtaaaataacaattacctgatcaagtgatagtatccaaaagttc 3839683  T
Q  529 atc-ttcctctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  3839682 aacacttcactagctaaagatgagctagtttgactt 3839647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 10884010 - 10883875
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    ||||||||||  |||||||||||||||||||| |||||||  || |||||||||||||||||||||||||| || | ||||   ||||| |||||||| |    
T  10884010 aaacttgaaccgttccttgtcctcaaggaatttacttgtaatattgacaatcgacagtaaaataacaattacctgatcaagcgatagtacccaaaagttc 10883911  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  10883910 aacaccttactagctaaagatgagctagtttgactt 10883875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 15196206 - 15196275
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||||||||||||||||||||||||| ||||| |  || ||| |||||||||||||||| |||||    
T  15196206 aaacttgaactattccttgtcctcaaggaatttacttgcaaaattgac-atcgacagtaaaataaaaatta 15196275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 19302371 - 19302441
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||||||||||||||||||||||||  || || |  || |||||||||| |||||||||||||||    
T  19302371 aaacttgaactattccttgtcctcaaggaatctacgtggaatattgacaatcgactgtaaaataacaatta 19302441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 499
Target Start/End: Complemental strand, 47053953 - 47053883
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||| ||||||||||||||||||||  ||||| |  || |||||| |||||||||||||||||||    
T  47053953 aaacttgaaccattccttgtcctcaaggaatatacttgcaatattgacaattgacagtaaaataacaatta 47053883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 526
Target Start/End: Original strand, 22994601 - 22994698
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagt 526  Q
    |||||||||| ||||||||||| ||||| ||| ||||| |  || ||||| |||||||||||||||||||| |||| ||||   ||||| ||||||||    
T  22994601 aaacttgaaccattccttgtccccaaggtatttacttgcaatattgacaaccgacagtaaaataacaattacctaatcaagcgatagtacccaaaagt 22994698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 10961884 - 10961845
Alignment:
Q  379 gtgtatatttttcatgatttgttctttgttctctagtacc 418  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10961884 gtgtgtatttttcatgatttgttctttgttctctagtacc 10961845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 10965393 - 10965354
Alignment:
Q  379 gtgtatatttttcatgatttgttctttgttctctagtacc 418  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10965393 gtgtgtatttttcatgatttgttctttgttctctagtacc 10965354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 524
Target Start/End: Complemental strand, 11636101 - 11636006
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaa 524  Q
    ||||||||||  |||||||||||||  ||||| ||||| |  || ||||||| |||||||||||||||||| |||| ||||   ||||||||||||    
T  11636101 aaacttgaacctttccttgtcctcacagaatttacttgcaaaattgacaatcaacagtaaaataacaattacctaatcaagcgatagtatccaaaa 11636006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 18541800 - 18541657
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcata--gacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagt 526  Q
    |||||||||| ||||||||||||||||||||| | ||  |  | |  |||||||||||||||||||| ||||| |||| |||||  ||||||||||        
T  18541800 aaacttgaaccattccttgtcctcaaggaatttatttaaaaaaaattgacaatcgacagtaaaataataattacctaatcaagtgatagtatccaa---- 18541705  T
Q  527 ccatcttcct-ctagcca-atgatgagctagtttgactttcatgcatcca 574  Q
      |||| ||| ||||||| |||||||||||||||||||| | ||||||||    
T  18541704 --atctccctactagccatatgatgagctagtttgacttgcttgcatcca 18541657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 17140628 - 17140672
Alignment:
Q  106 tacacactttgaggtctttcagggttataacggggtttaggttaa 150  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||    
T  17140628 tacacactttgaggtctttcagggttataacgtggcctaggttaa 17140672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 22995128 - 22995167
Alignment:
Q  379 gtgtatatttttcatgatttgttctttgttctctagtacc 418  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  22995128 gtgtgtattgttcatgatttgttctttgttctctagtacc 22995167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 20290093 - 20290022
Alignment:
Q  107 acacactttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctg 179  Q
    ||||| |||||||||||||| | |||||||  || |||||||||| |||||| ||||||||  ||||||||||    
T  20290093 acacattttgaggtctttcaagattataacatggcttaggttaagatgagat-atatttgggaaagtaggctg 20290022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 305; Significance: 1e-171; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 13 - 403
Target Start/End: Complemental strand, 30763803 - 30763413
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  30763803 aatatgataagggttcacactcaatcaacgtgcaggtctacatattgccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 30763704  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagat-aatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaa 211  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30763703 tttgaggtctttcagggttataacggggtttaggtaaaggtgagattaatatttggataagtaggctacacaaaatttgagttaggcattcctacggaaa 30763604  T
Q  212 ttaaagaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaatt 311  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  30763603 ttaaagaatggattcaattcctcattcacaccttgaaataacaatttataaaggtactagagaatatttgtaacttgttgggacaatcgagtttaaaatt 30763504  T
Q  312 actcagatttttcattgtttgtcccttgctttttattcnnnnnnnnnatacaccattttgagtttgagtgtatatttttcatgatttgttct 403  Q
    ||||| ||||||||||||||||||||||||||| |||          |||||||||||||| ||||||||||||||||||||||||||||||    
T  30763503 actcaaatttttcattgtttgtcccttgcttttcatt-ttttttttgatacaccattttgattttgagtgtatatttttcatgatttgttct 30763413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 17 - 421
Target Start/End: Complemental strand, 2455810 - 2455408
Alignment:
Q  17 tgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttg 116  Q
    |||||||||||||||| || || || ||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2455810 tgataagggttcacacacagtcgacatgctggtctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcattacacactttg 2455711  T
Q  117 aggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaa 216  Q
    |||||||| ||||||||||||| | |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| || |||| ||||||||    
T  2455710 aggtctttaagggttataacggagcttaggtaaaggtgtgatattatttggataaataggctacacaaaatttgagttaggcactcatacgaaaattaaa 2455611  T
Q  217 gaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactca 316  Q
    | ||||||||||| ||||||||||||||||||| ||||| || ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||  |    
T  2455610 gcatggattcaatccctcattcaccccttgaaacaacaa-ttgtaaaggtactagagaatatttataacttgttgggacaatcgagtttaaaattaccaa 2455512  T
Q  317 gatttttcattgtttgtcccttgctttttattcnnnnnnnnnatacaccattttgagtttgagtgtatatttttcatgatttgttctttgttctctagta 416  Q
    ||||||| |||||||||||||||||||| |||          |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2455511 gattttttattgtttgtcccttgcttttcatt-ttttttttgatacaccattttgattttgagtgtatatttttcatgatttgttctttgttctctagta 2455413  T
Q  417 cctcc 421  Q
    |||||    
T  2455412 cctcc 2455408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 49 - 421
Target Start/End: Complemental strand, 26550595 - 26550216
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  26550595 tctacatattaccatacgcttgaaaaatttctaaacgtcaataaaaatcaatatcaatgcacactttgaggtctttaagggttataacggggcttaggtg 26550496  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaattt-gagttaggca-ttcctacggaaattaaagaatggattcaattcctcattcaccccttg 246  Q
    |||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  26550495 aaggtgggataatatttggataagtaggctacacaaaattttgagttaggcaattcctacggaagttaaagaatggattcaatccctcattcaccccttg 26550396  T
Q  247 aaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttttcattgtttgtcccttgcttttta 346  Q
    |||||||||||| ||||||||||||| | |||||||||||| || ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |    
T  26550395 aaataacaatttgtaaaggtactagagattatttgtaacttgttaggacaatcgagtttaaagttactcaaatttttctttgtttgtcccttgcttttca 26550296  T
Q  347 ttc-----nnnnnnnnnatacaccattttgagtttgagtgtatatttttcatgatttgttctttgttctctagtacctcc 421  Q
    |||              |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  26550295 ttctctttttttttttgatacaccattttgattttgagtgtatatttttcatgatttgttctttattctctagtacctcc 26550216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 49 - 421
Target Start/End: Original strand, 28563535 - 28563916
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  28563535 tctacatattaccatacgcttgaaaaatttctaaacgtcaataaaaatcaatatcaatgcacactttgaggtctttaagggttataacggggcttaggtg 28563634  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaattt-gagttaggca-ttcctacggaaattaaagaatggattcaattcctcattcaccccttg 246  Q
    |||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||    
T  28563635 aaggtgggataatatttggataagtaggctacacaaaattttgagttaggcaattcctacggaagttaaagaatggattcaatcactcattcaccccttg 28563734  T
Q  247 aaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttttcattgtttgtcccttgcttttta 346  Q
    |||||||||||| ||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |    
T  28563735 aaataacaatttgtaaaggtactagagattatttgtaacttgttgggacaatcgagtttaaagttactcaaatttttctttgtttgtcccttgcttttca 28563834  T
Q  347 ttc------nnnnnnnnnatacacca-ttttgagtttgagtgtatatttttcatgatttgttctttgttctctagtacctcc 421  Q
    |||               |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  28563835 ttctcttttttttttttgatacaccatttttgattttgagtgtatatttttcatgatttgttctttattctctagtacctcc 28563916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 421
Target Start/End: Complemental strand, 19688578 - 19688162
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    ||||||| |||||||||||||||||| ||||||| ||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||||||||    
T  19688578 aatatgacaagggttcacactcaatcgacgtgcaagtctacatattaccatacgcttgaaaaatttctaaacgtcaatcaaaatcaatgtcattacacac 19688479  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaat 212  Q
    |||||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||| ||| |||||||||||||||||||| |||||  |||||    
T  19688478 tttgaggtctttaagggttataacggggcttaggtaaaggtgggataatatttggataagtaagctacacaaaatttgagttaggcactcctatagaaat 19688379  T
Q  213 taaagaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaatta 312  Q
    ||||| |  |||||||| || ||||||| |||||||| |||||||| |||| ||||||||   |||||||||| |||| ||||||||||||||||| |||    
T  19688378 taaagcaaagattcaatcccacattcacaccttgaaacaacaatttgtaaaagtactagagcttatttgtaac-ttttaggacaatcgagtttaaagtta 19688280  T
Q  313 ctcagatttttcattgtttgtcccttgctttttattc---------nnnnnnnnnatacaccattttgagtttgagtgtatatttttcatgatttgttct 403  Q
    |||||||||||| ||||||||||| ||||||| ||||                  |||||||||||||| |||||||||||||||||||||||||||||     
T  19688279 ctcagatttttctttgtttgtcccctgcttttcattctctttttttttttttttgatacaccattttgattttgagtgtatatttttcatgatttgttca 19688180  T
Q  404 ttgttctctagtacctcc 421  Q
    || |||||||||||||||    
T  19688179 ttattctctagtacctcc 19688162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 30763970 - 30763825
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||| |    
T  30763970 aaacttgaactattccttatcctcaagaaattcacttgtagcattgacaatcgacagtaaaataacaattacctaaccaagtagtagtatccaaaagttc 30763871  T
Q  529 atcttcctctagccaatgatgagctagtttgactttcatgcatcca 574  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  30763870 atcttcctctagccaacgatgagctagtttgactttcatgcatcca 30763825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 22938266 - 22938432
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||  || |||||| ||||| ||||||     
T  22938266 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagagttatagcggggcttaggtg 22938365  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  22938366 aaggtgggataatatttggataagtaggctacacaaaatttgagttaggcatccctacggaagttaa 22938432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 49 - 207
Target Start/End: Original strand, 34134086 - 34134245
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaata-tcattacacactttgaggtctttcagggttataacggggtttaggt 147  Q
    ||||||||||||||||   |||||| |||||||||||||||||||||||| |  ||| | ||||||||||||||||| ||||||||||||||| ||||||    
T  34134086 tctacatattaccataagcttgaaaggtttctaaacgtcaatcaaaatcatttgtcaatgcacactttgaggtctttaagggttataacggggcttaggt 34134185  T
Q  148 taaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacg 207  Q
     |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34134186 gaaggtgggataatatttggataagtaggctacacaaaatttgagttaggcattcctacg 34134245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 2837867 - 2838072
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    |||||||  ||||||||||| || || || |||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||| |   |||    
T  2837867 aatatgaatagggttcacacacagtcgacatgcaagtctacatattaccatacatttgaaaaatttataaacgtcaatcaaaatcaatgtcaatgtccac 2837966  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctacggaaa 211  Q
    |||||| ||||| ||||||||||||||| |||||| |||||| |||||||||| | |||||||||| ||||||| ||||||||| ||| ||||||||||     
T  2837967 tttgagatctttaagggttataacggggcttaggtgaaggtgggataatattttgttaagtaggctacacaaaattttgagttatgcactcctacggaag 2838066  T
Q  212 ttaaag 217  Q
    ||||||    
T  2838067 ttaaag 2838072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 19688742 - 19688600
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| |||| |||||||||||||||| |||||||  || |||||| || |||||||||||||||| |||| ||||||||||||||||||||| |    
T  19688742 aaacttgaacaattcattgtcctcaaggaatttacttgtaaaattgacaatagatagtaaaataacaattacctaaccaagtagtagtatccaaaagttc 19688643  T
Q  529 atcttcctctagccaatgatgagctagtttgactttcatgcatcca 574  Q
    |||| ||||||||||   ||||||||||||||||||||||||||||    
T  19688642 atctccctctagcca---atgagctagtttgactttcatgcatcca 19688600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 26550800 - 26550665
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||||||||||||||||||||||||| | ||| | ||| || | ||||||||||||||||||||| |||| ||||   ||||| |||||||| |    
T  26550800 aaacttgaactattccttgtcctcaaggaatttatttgcaacattgatagtcgacagtaaaataacaattacctaatcaagcgatagtacccaaaagttc 26550701  T
Q  529 atcttc-ctctagccaatgatgagctagtttgactt 563  Q
    | || | | ||||| |||||||||||||||||||||    
T  26550700 aactcctcactagctaatgatgagctagtttgactt 26550665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 2455982 - 2455836
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  ||||||||||||| |||||||||||||||   | |||||||||||||||||||||||||| |||| ||||   ||||||||||||||      
T  2455982 aaacttgaatcattccttgtcctcgaggaattcacttgtaatgttgacaatcgacagtaaaataacaattacctaatcaagcgatagtatccaaaagttg 2455883  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactttcatgcatcca 574  Q
    |||| | | ||||| ||  ||||||||||||||||| | ||||||||    
T  2455882 atctccttactagctaaaaatgagctagtttgacttgcttgcatcca 2455836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 28563330 - 28563465
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||||||||||||||||||||||||| | ||| | ||| || | ||||||||||||||| ||||| |||| ||||   ||||| | |||||| |    
T  28563330 aaacttgaactattccttgtcctcaaggaatttatttgcaacattgatagtcgacagtaaaataataattacctaatcaagcgatagtacctaaaagttc 28563429  T
Q  529 atcttc-ctctagccaatgatgagctagtttgactt 563  Q
    | || | | ||||| |||||||||||||||||||||    
T  28563430 aactcctcactagctaatgatgagctagtttgactt 28563465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 35382070 - 35382145
Alignment:
Q  260 taaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttttcattgtttgtccc 336  Q
    ||||||||||||| | ||||||||||  || ||||||||||||||| |||||||||| |||||||||||||||||||    
T  35382070 taaaggtactagagattatttgtaacaatt-gggacaatcgagtttgaaattactcaaatttttcattgtttgtccc 35382145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 429 - 496
Target Start/End: Original strand, 22938063 - 22938130
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaa 496  Q
    |||||||||| ||||||||||||||||||||||||||| |  || |||||  ||||||||||||||||    
T  22938063 aaacttgaaccattccttgtcctcaaggaattcacttgaaaaattgacaaatgacagtaaaataacaa 22938130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 499
Target Start/End: Complemental strand, 26292078 - 26292008
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||||||||||| |||| |||||||| ||||| |  || ||||||||||| ||||||||||||||    
T  26292078 aaacttgaactattccttatcctaaaggaatttacttgcaaaattgacaatcgacaataaaataacaatta 26292008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 34489295 - 34489341
Alignment:
Q  106 tacacactttgaggtctttcagggttataacggggtttaggttaagg 152  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  34489295 tacacattttgaggtctttcagggttataacgtggtttaggttaagg 34489341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 2837698 - 2837833
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  ||||||||||||||||||||  ||||| |  || ||||||| |||||||||||||||||| || | ||||   ||||| | |||||| |    
T  2837698 aaacttgaatcattccttgtcctcaaggaatctacttgcaatattgacaatcaacagtaaaataacaattacctgatcaagcgatagtaccgaaaagttc 2837797  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | || | | ||||| || ||||||||||||||||||    
T  2837798 aactccttactagctaaagatgagctagtttgactt 2837833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 24262487 - 24262533
Alignment:
Q  106 tacacactttgaggtctttcagggttataacggggtttaggttaagg 152  Q
    ||||||||||||||| |||||||||||||| | ||||||||||||||    
T  24262487 tacacactttgaggtatttcagggttataatgtggtttaggttaagg 24262533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 219; Significance: 1e-120; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 17 - 421
Target Start/End: Complemental strand, 9531 - 9125
Alignment:
Q  17 tgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttg 116  Q
    |||||||||||||||| || || || ||| ||||||||||||||||| |  ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9531 tgataagggttcacacacagtcgacatgctggtctacatattaccatgcgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcattacacactttg 9432  T
Q  117 aggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaa 216  Q
    |||||||| |||||||||| |||| |||||| |||||| |||| |||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||    
T  9431 aggtctttaagggttataatggggcttaggtaaaggtgggatattatttggataagtaggctacacaaaatttgagttaggcacgcctacgaaaattaaa 9332  T
Q  217 gaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactca 316  Q
    | ||||||||||| ||||||||||||||||||| ||||| || ||||||||||| | ||||||| |||||| |||||||||||||||||||||||||| |    
T  9331 gcatggattcaatccctcattcaccccttgaaacaacaa-ttgtaaaggtactatagaatatttataacttgttgggacaatcgagtttaaaattactaa 9233  T
Q  317 gatttttcattgtttgtcccttgctttttattc---nnnnnnnnnatacaccattttgagtttgagtgtatatttttcatgatttgttctttgttctcta 413  Q
     | |||||||||||||||||||| |||| ||||            |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  9232 aaattttcattgtttgtcccttgtttttcattcttttttttttttatacaccattttgattttgagtgtatatttttcatgattttttctttgttctcta 9133  T
Q  414 gtacctcc 421  Q
    ||| ||||    
T  9132 gtatctcc 9125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 9703 - 9557
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  ||||||||||||| |||||||||||||||   | || |||| |||||||||||||||||| |||| ||||   ||||| |||||||| |    
T  9703 aaacttgaatcattccttgtcctcgaggaattcacttgtaatgttgataatcaacagtaaaataacaattacctaatcaagcgatagtacccaaaagttc 9604  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactttcatgcatcca 574  Q
    |||| ||| ||||| ||  |||||| |||||||||| | ||||||||    
T  9603 atctccctactagctaaaaatgagcaagtttgacttgcttgcatcca 9557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 219; Significance: 1e-120; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 17 - 421
Target Start/End: Complemental strand, 226286 - 225881
Alignment:
Q  17 tgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttg 116  Q
    |||||||||||||||| || || || ||  |||||||||||||| |||   ||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  226286 tgataagggttcacacacagtcgacatgttggtctacatattacaatatgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcattacacattttg 226187  T
Q  117 aggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaa 216  Q
    |||||||| |||||||||||||||||||||| |||||  |||| ||||||||||||||| || |||||||||||||||||||| ||||| | ||||||||    
T  226186 aggtctttaagggttataacggggtttaggtaaaggtatgatattatttggataagtagactacacaaaatttgagttaggcactcctaggaaaattaaa 226087  T
Q  217 gaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactca 316  Q
    | ||||||||||| |||||||| |||||||||| ||||| || ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||| |    
T  226086 gcatggattcaatccctcattcgccccttgaaacaacaa-ttgtaaaggtactagagaatatttataacttgttgggacaatcgagtttaaaattact-a 225989  T
Q  317 gatttttcattgtttgtcccttgctttttattc---nnnnnnnnnatacaccattttgagtttgagtgtatatttttcatgatttgttctttgttctcta 413  Q
     ||||||||||||||||||||||||||| ||||            |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  225988 tatttttcattgtttgtcccttgcttttcattcctttttttttatatacaccattttgattttgagtgtatatttttcatgatttgttctttgttctcta 225889  T
Q  414 gtacctcc 421  Q
    ||||||||    
T  225888 gtacctcc 225881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 422 - 504
Target Start/End: Complemental strand, 226464 - 226383
Alignment:
Q  422 caacctaaaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaa 504  Q
    |||||| |||||||||  |||||||||| |||||||||||||||||||  | |||||||||||||||||||||||||| ||||    
T  226464 caacctcaaacttgaatcattccttgtc-tcaaggaattcacttgtagtgttgacaatcgacagtaaaataacaattacctaa 226383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 17 - 421
Target Start/End: Complemental strand, 31983928 - 31983523
Alignment:
Q  17 tgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttg 116  Q
    |||||||||||||||| || || || ||  |||||||||||||| |||   ||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  31983928 tgataagggttcacacacagtcgacatgttggtctacatattacaatatgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcattacacattttg 31983829  T
Q  117 aggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaa 216  Q
    |||||||| |||||||||||||||||||||| |||||  |||| ||||||||||||||| || |||||||||||||||||||| ||||| | ||||||||    
T  31983828 aggtctttaagggttataacggggtttaggtaaaggtatgatattatttggataagtagactacacaaaatttgagttaggcactcctaggaaaattaaa 31983729  T
Q  217 gaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactca 316  Q
    | ||||||||||| |||||||| |||||||||| ||||| || ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||| |    
T  31983728 gcatggattcaatccctcattcgccccttgaaacaacaa-ttgtaaaggtactagagaatatttataacttgttgggacaatcgagtttaaaattact-a 31983631  T
Q  317 gatttttcattgtttgtcccttgctttttattc---nnnnnnnnnatacaccattttgagtttgagtgtatatttttcatgatttgttctttgttctcta 413  Q
     ||||||||||||||||||||||||||| ||||            |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31983630 tatttttcattgtttgtcccttgcttttcattcctttttttttatatacaccattttgattttgagtgtatatttttcatgatttgttctttgttctcta 31983531  T
Q  414 gtacctcc 421  Q
    ||||||||    
T  31983530 gtacctcc 31983523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 336
Target Start/End: Original strand, 22223506 - 22223828
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  22223506 aatatgataagggttcacacacagtctacgtgcaggtctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcattacacac 22223605  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaat 212  Q
    |||||||||||| ||||||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| | |||| || ||||    
T  22223606 tttgaggtctttaagggttataacggggcttaggtaaaggtgagataatatttgaataagtaggctacacaaaatttgagttagggactccttcgaaaat 22223705  T
Q  213 taaagaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaatta 312  Q
    ||||| |  |||||||| |||||||||||| |||||| ||||||    |||| ||||||| |||||||||||| | ||||||||||||||||| ||||||    
T  22223706 taaagcaaagattcaatccctcattcaccctttgaaacaacaatggtaaaagttactagagaatatttgtaac-tattgggacaatcgagtttgaaatta 22223804  T
Q  313 ctcagatttttcattgtttgtccc 336  Q
    ||| ||||| ||||||||||||||    
T  22223805 ctcggatttatcattgtttgtccc 22223828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 336
Target Start/End: Original strand, 22229848 - 22230170
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  22229848 aatatgataagggttcacacacagtctacgtgcaggtctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcattacacac 22229947  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaat 212  Q
    |||||||||||| ||||||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| | |||| || ||||    
T  22229948 tttgaggtctttaagggttataacggggcttaggtaaaggtgagataatatttgaataagtaggctacacaaaatttgagttagggactccttcgaaaat 22230047  T
Q  213 taaagaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaatta 312  Q
    ||||| |  |||||||| |||||||||||| |||||| ||||||    |||| ||||||| |||||||||||| | ||||||||||||||||| ||||||    
T  22230048 taaagcaaagattcaatccctcattcaccctttgaaacaacaatggtaaaagttactagagaatatttgtaac-tattgggacaatcgagtttgaaatta 22230146  T
Q  313 ctcagatttttcattgtttgtccc 336  Q
    ||| ||||| ||||||||||||||    
T  22230147 ctcggatttatcattgtttgtccc 22230170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 38249571 - 38249739
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | |||||||||| |||||||||||||||||||||| ||||||     
T  38249571 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgatgtctttcagggttataacggggcttaggtg 38249670  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaag 217  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38249671 aaggtgggataatatttggataagtaggctacacaaaatttgagttaggcattcctacggaaattaaag 38249739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 8910650 - 8910484
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| ||||||     
T  8910650 tctatatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacggggcttaggtg 8910551  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  8910550 aaggtgtgataatatttggataagtaggctacacaaaatttgagttaggcattcctacggaagttaa 8910484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 49 - 210
Target Start/End: Complemental strand, 17930019 - 17929857
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| ||||||     
T  17930019 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacggggcttaggtg 17929920  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctacggaa 210  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  17929919 aaggtgagataatatttggataagtaggctacacaaaattttgagttaggcactcctacggaa 17929857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 23646066 - 23645900
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |||||||| ||||||     
T  23646066 tctacatattaccatacgcttaaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttgtaacggggcttaggtg 23645967  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  23645966 aaggtgggataatatttggataagtaggctatacaaaatttgagttaggcattcctacggaagttaa 23645900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 49 - 207
Target Start/End: Original strand, 23945029 - 23945187
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||  ||||||     
T  23945029 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacgggacttaggtg 23945128  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacg 207  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  23945129 aaggtgggataatatttggataagtaggttacacaaaatttgagttaggcattcctacg 23945187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 49 - 207
Target Start/End: Complemental strand, 12585261 - 12585103
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||||||| ||  | ||||||||||||| ||  ||||||||||||||| ||||||     
T  12585261 tctacatattaccttacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcgatgcacactttgaggtattaaagggttataacggggcttaggtg 12585162  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacg 207  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12585161 aaggtgggataatatttggataagtaggctacacaaaatttgagttaggcattcctacg 12585103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 22175075 - 22175268
Alignment:
Q  21 aagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggt 120  Q
    |||||||||||| ||||| || ||||  |||||||||||||| ||  ||||||||||||||||||||||||||||||||| ||| | |||||||||||||    
T  22175075 aagggttcacacacaatcgacatgcaa-tctacatattaccacacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggt 22175173  T
Q  121 ctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
     ||  ||||||||||||||| |||||| |||||| || ||||||| |||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  22175174 tttaaagggttataacggggcttaggtgaaggtgggacaatatttcgataagtaggctacacaatatttgagttaggcattcctacggaagttaa 22175268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 33878449 - 33878614
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  33878449 tctacatattaccatacgcttgaaaagtttctaaacatcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacggggcttaggtg 33878548  T
Q  149 aaggtgagata-atatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||  |||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||    
T  33878549 aaggtgggatatttatttggataagtaggctacacaaaatttgagttaggca--cctacggaagttaa 33878614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 25592711 - 25592877
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaa-tatcattacacactttgaggtctttcagggttataacggggtttaggt 147  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||| | ||| | ||||||||||||||||  ||||||||||| ||| ||||||    
T  25592711 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaattgtcaatgcacactttgaggtcttaaagggttataacagggcttaggt 25592810  T
Q  148 taaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
     |||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  25592811 gaaggtgggat-atatttggataagtaggctacacaaaatttgagtttggcattcatacggaagttaa 25592877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 429 - 573
Target Start/End: Original strand, 22223338 - 22223483
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  ||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||| |||| ||||   ||||| |||||||| |    
T  22223338 aaacttgaatcattccttgtcctcaaggaattcacttgtcacattgacaatcgacagtaaaataacaattacctaatcaagggatagtacccaaaagttc 22223437  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactttcatgcatcc 573  Q
    |||| ||| ||||| ||  |||||  |||||||||| | |||||||    
T  22223438 atctccctactagctaaaaatgagtcagtttgacttgcttgcatcc 22223483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 429 - 573
Target Start/End: Original strand, 22229680 - 22229825
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  ||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||| |||| ||||   ||||| |||||||| |    
T  22229680 aaacttgaatcattccttgtcctcaaggaattcacttgtcacattgacaatcgacagtaaaataacaattacctaatcaagggatagtacccaaaagttc 22229779  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactttcatgcatcc 573  Q
    |||| ||| ||||| ||  |||||  |||||||||| | |||||||    
T  22229780 atctccctactagctaaaaatgagtcagtttgacttgcttgcatcc 22229825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 422 - 504
Target Start/End: Complemental strand, 31984106 - 31984025
Alignment:
Q  422 caacctaaaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaa 504  Q
    |||||| |||||||||  |||||||||| |||||||||||||||||||  | |||||||||||||||||||||||||| ||||    
T  31984106 caacctcaaacttgaatcattccttgtc-tcaaggaattcacttgtagtgttgacaatcgacagtaaaataacaattacctaa 31984025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 17930222 - 17930076
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||| | |||||||||||||||||||||  |||| |  ||  |||||||||||||||||||||||||||| | |||||  ||||| |||||||  |    
T  17930222 aaacttgatccattccttgtcctcaaggaatttccttgcaaaattaacaatcgacagtaaaataacaattatctgatcaagtgatagtacccaaaagatc 17930123  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactttcatgcatcca 574  Q
    | || | | ||| | || ||||||||||||||||||  |||||||||    
T  17930122 aactccttactacctaaagatgagctagtttgacttgtatgcatcca 17930076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 33878246 - 33878316
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||| ||||||||||||||||||||  ||||| |  || ||||||||||||||||||||||||||    
T  33878246 aaacttgaaccattccttgtcctcaaggaatctacttgaaatattgacaatcgacagtaaaataacaatta 33878316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 23646269 - 23646134
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| ||||||||||||||||||||||| ||| | ||| |||||||||| ||| |||| |||||| || | ||||   ||||| |||||||| |    
T  23646269 aaacttgaaccattccttgtcctcaaggaattcatttgcaacattgacaatcgacggtagaatagcaattacctgatcaagcgatagtacccaaaagttc 23646170  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  23646169 aacaccttactagctaaagatgagctagtttgactt 23646134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 440 - 499
Target Start/End: Original strand, 25592519 - 25592578
Alignment:
Q  440 attccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    ||||||||||||||||||||| |||||||  || |||||||||||||||||||| |||||    
T  25592519 attccttgtcctcaaggaatttacttgtaatattgacaatcgacagtaaaataaaaatta 25592578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 499
Target Start/End: Complemental strand, 5827145 - 5827076
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||| |||||||||| |||||||||| ||||  | ||| ||||||||||||||||||||||||||    
T  5827145 aaacttgaaccattccttgtc-tcaaggaatttacttacatcattgacaatcgacagtaaaataacaatta 5827076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 433 - 499
Target Start/End: Complemental strand, 8910850 - 8910784
Alignment:
Q  433 ttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||| ||||||||||||||||||||  ||||| |  || ||||||||||||||||||||||||||    
T  8910850 ttgaaccattccttgtcctcaaggaatctacttgcaatattgacaatcgacagtaaaataacaatta 8910784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 13833238 - 13833190
Alignment:
Q  106 tacacactttgaggtctttcagggttataacggggtttaggttaaggtg 154  Q
    |||||||||||||||||||||||||| ||||| || ||||| |||||||    
T  13833238 tacacactttgaggtctttcagggttgtaacgtggcttagggtaaggtg 13833190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 22174899 - 22174969
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    ||||||||| ||||||||||||| |||||||  ||||| |  || |||||| || ||||||||||||||||    
T  22174899 aaacttgaattattccttgtccttaaggaatctacttgcaaaattgacaattgatagtaaaataacaatta 22174969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 17970941 - 17970989
Alignment:
Q  106 tacacactttgaggtctttcagggttataacggggtttaggttaaggtg 154  Q
    ||||||||||||||||||| |||||||||| |  | |||||||||||||    
T  17970941 tacacactttgaggtctttgagggttataatgtagcttaggttaaggtg 17970989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 49 - 421
Target Start/End: Complemental strand, 11058817 - 11058430
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||| | |||||||| |||||||| ||||||||||||||| ||||||     
T  11058817 tctacatattaccatacgcttgaaaaatttctaaacgtcaataaaaatcaatatcaatgcacactttaaggtctttaagggttataacggggcttaggtg 11058718  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggc--attcctacggaaattaaagaatggattcaattcctcattcacccctt 245  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||  | |||||||||| |||||||||||||||||| ||||||||| |||||    
T  11058717 aaggtgggataatatttggataagtaggctacacaaaattttgagttaggccaactcctacggaagttaaagaatggattcaatccctcattca-ccctt 11058619  T
Q  246 gaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttttcattgtttgtcccttgcttttt 345  Q
    ||||||||||||| ||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||     
T  11058618 gaaataacaatttgtaaaggtactagagattatttgtaacttgttgggacaatcgagtttaaatttactcaaatttttctttgtttgtcccttgcttttc 11058519  T
Q  346 attc-------------nnnnnnnnnatacaccattttgagtttgagtgtatatttttcatgatttgttctttgttctctagtacctcc 421  Q
    ||||                      |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  11058518 attctctctttttttttttttttttgatacaccattttgattttgagtgtatatttttcatgatttgttctttattctctagtacctcc 11058430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 1504528 - 1504694
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| | ||||||||||||| ||||||     
T  1504528 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaacggttataacggggcttaggtg 1504627  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  1504628 aaggtgagataatatttggataagtaggctacacaaaatttgagttaggcattcctacggaagttaa 1504694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 45456089 - 45455923
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| ||||||     
T  45456089 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacggggcttaggtg 45455990  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  45455989 aaggtgggataatatttggataagtaggctacacaaaatttgagttaggcattcctacgaaaattaa 45455923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 13973024 - 13973190
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| ||||||     
T  13973024 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcagttcacactttgaggtcttaaagggttataacggggcttaggtg 13973123  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||| ||||| ||||||| ||||    
T  13973124 aaggtgggataatatttggataagtaggctacaaaaaatttgagttagacattcatacggaagttaa 13973190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 31428648 - 31428814
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||  ||||||||||| ||| ||||||     
T  31428648 tctacatattaccatacgcttgaaaagtttctaaacatcaatcaaaatcaatatcaatgcacactttgaggtcttaaagggttataacagggcttaggtg 31428747  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    ||||||  |||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||    
T  31428748 aaggtggaataatatttggataagtaggctacacaaaatttgagttaggcatttctacggaagttaa 31428814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 25872989 - 25872826
Alignment:
Q  52 acatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggttaag 151  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||| ||| | |||| |||||||||||  ||||||||||||||| |||||| |||    
T  25872989 acatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacattttgaggtcttaaagggttataacggggcttaggtgaag 25872890  T
Q  152 gtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  25872889 gtgggataatatttggataagtaggctacacaaaatttgagttaggcattcatacggaagttaa 25872826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 9186554 - 9186719
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||| | ||  ||||||||||||| ||||||||||||||| ||||||     
T  9186554 tctacatattaccatacgcttggaaagtttctaaacgtcaatcaaaatcaatgtcaatgcag-ctttgaggtctttaagggttataacggggcttaggtg 9186652  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  9186653 aaggcgggataatatttggataagtaggctacacaaaatttgagttaggcattcctacggaagttaa 9186719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 49 - 217
Target Start/End: Complemental strand, 24237343 - 24237174
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  24237343 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacggggcttaggtg 24237244  T
Q  149 aaggtgagata-atatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaag 217  Q
    |||||| ||||  |||||||||||||||||| |||||||||||||||||||| ||||||| || ||||||    
T  24237243 aaggtgggatatttatttggataagtaggctacacaaaatttgagttaggcactcctacgaaagttaaag 24237174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 25957574 - 25957745
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   | ||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  25957574 tctacatattaccataagctggaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacggggcttaggtg 25957673  T
Q  149 aaggtgagata---atatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaag 217  Q
    |||||| ||||    |||||||||||||||||| ||||||||||||||| |||| ||||||| || ||||||    
T  25957674 aaggtgggatatatttatttggataagtaggctacacaaaatttgagttgggcactcctacgaaagttaaag 25957745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 25957371 - 25957506
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||| || | |||| | ||||| |||||||| |    
T  25957371 aaacttgaactattccttgtcctcaaggaatttacttgtaatattgacaatcgacagtaaaataacaattacctgatcaagcaatagtaaccaaaagttc 25957470  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  25957471 aacaccttactagctaaagatgagctagtttgactt 25957506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 31428445 - 31428580
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| ||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||| || | ||||   ||||| |||||||| |    
T  31428445 aaacttgaaccattccttgtcctcaaggaatttacttgtaatattgacaatcgacagtaaaataacaattacctgatcaagcgatagtacccaaaagttc 31428544  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    |||  | | ||||| || ||||||||||||||||||    
T  31428545 atcaccttactagctaaagatgagctagtttgactt 31428580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 9186351 - 9186486
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||||||||||||||||||||||||| |||||||  || |||||||||||| ||||||||||||| || | ||||   ||||| |||||||| |    
T  9186351 aaacttgaactattccttgtcctcaaggaatttacttgtaatattgacaatcgacagcaaaataacaattacctgatcaagcgatagtacccaaaagttc 9186450  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  9186451 aacaccttactagctaaagatgagctagtttgactt 9186486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 11059022 - 11058887
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  |||||||||||||||||||||||||||||   | |||||||||||||||||||| ||||| || | ||||   ||||| |||||||  |    
T  11059022 aaacttgaatcattccttgtcctcaaggaattcacttgtaatgttgacaatcgacagtaaaataaaaattacctgatcaagcgatagtacccaaaagctc 11058923  T
Q  529 atcttc-ctctagccaatgatgagctagtttgactt 563  Q
    | |||| | ||||| |||||||||||||||||||||    
T  11058922 aacttctcactagctaatgatgagctagtttgactt 11058887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 429 - 499
Target Start/End: Complemental strand, 24237546 - 24237476
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||||||||||||||||||||||||| |||||||  || ||||||||| ||||||||||||||||    
T  24237546 aaacttgaactattccttgtcctcaaggaatttacttgtaatattgacaatcgatagtaaaataacaatta 24237476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 1504326 - 1504460
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| |||||||||||||||||| || ||||||| ||| |||||| ||||||||||||||||||| || | ||||   ||||| |||||||| |    
T  1504326 aaacttgaaccattccttgtcctcaaggattt-acttgtaacattgacaattgacagtaaaataacaattacctgatcaagcgatagtacccaaaagttc 1504424  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  1504425 aacaccttactagctaaagatgagctagtttgactt 1504460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 25873195 - 25873060
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| ||||||||||||||||||||  ||||| |  || |||||||||||||||||||||| ||| || | |||||  ||||| |||||||| |    
T  25873195 aaacttgaaccattccttgtcctcaaggaatctacttgcaatattgacaatcgacagtaaaataacagttacctgatcaagtgatagtacccaaaagttc 25873096  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  25873095 aacaccttactagctaaagatgagctagtttgactt 25873060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 433 - 499
Target Start/End: Original strand, 13972825 - 13972891
Alignment:
Q  433 ttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||| ||||||||||||| ||||||| ||||||| ||| |||||| |||||||||||||||||||    
T  13972825 ttgaaccattccttgtcctcgaggaatttacttgtaacattgacaattgacagtaaaataacaatta 13972891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 510
Target Start/End: Complemental strand, 11187258 - 11187187
Alignment:
Q  440 attccttgtcctcaaggaattcacttgtagcatagacaatcgacagt-aaaataacaattatctaaacaagt 510  Q
    |||| |||||||||||||||| |||||||  || ||||| | ||||| |||||||||||||||||| |||||    
T  11187258 attctttgtcctcaaggaatttacttgtaaaattgacaaactacagtaaaaataacaattatctaatcaagt 11187187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 499
Target Start/End: Complemental strand, 45456292 - 45456222
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||| ||||||||||||||||||||  ||||| |  || |||||  ||| |||||||||||||||    
T  45456292 aaacttgaaccattccttgtcctcaaggaatctacttgcaatattgacaaatgactgtaaaataacaatta 45456222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 46 - 338
Target Start/End: Original strand, 26061020 - 26061312
Alignment:
Q  46 aggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttag 145  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||    
T  26061020 aggtctacatattaccatgcgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcattacacactttgaggtctttaagggttataacggggcttag 26061119  T
Q  146 gttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaagaatggattcaattcctcattcacccctt 245  Q
    || |||||| |||| ||||||||||||||| || || ||||||||||||||||| |||||  |||||||||| |||||||||||  |||||||| |||||    
T  26061120 gtaaaggtgtgatattatttggataagtagactacataaaatttgagttaggcactcctattgaaattaaagcatggattcaatcactcattcatccctt 26061219  T
Q  246 gaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttttcattgtttgtccctt 338  Q
    |||| |||||| | ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  26061220 gaaacaacaatatgtaaaggtactagagaatatttgtaacttgttgggacaatcgagtttaaagttactcagatttttcattgttcgtccctt 26061312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 13 - 336
Target Start/End: Complemental strand, 53895291 - 53894970
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    |||||||||||||||||||| || || || |||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||| |||||||||||    
T  53895291 aatatgataagggttcacacacagtcgacatgcaggtctacatattaccatacgcttgaagagtttctaaacgttaatcaaaatcaatgtcattacacac 53895192  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaat 212  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||| ||||    
T  53895191 tttgaggtctttcagggttataacggggcttaggtaaaggtgagataatatttggataagtaggctacacaaaatttgagtaaggaactcctacgaaaat 53895092  T
Q  213 taaagaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaatta 312  Q
    ||||| |  |||| ||| |||||| ||||| |||||| ||||| || ||||||||||||| | |||||||||| | | ||||||||||||||| ||||||    
T  53895091 taaagcaaagattaaatccctcatccaccctttgaaacaacaa-ttgtaaaggtactagagattatttgtaac-tatcgggacaatcgagtttgaaatta 53894994  T
Q  313 ctcagatttttcattgtttgtccc 336  Q
    ||||||||||||||||||||||||    
T  53894993 ctcagatttttcattgtttgtccc 53894970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 30 - 322
Target Start/End: Complemental strand, 15163205 - 15162912
Alignment:
Q  30 cactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcaggg 129  Q
    ||||||||||||||| |  |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  15163205 cactcaatcaacgtgaaaatctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcatttcacactttgaggactttcaggg 15163106  T
Q  130 ttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaag-aatggattcaa 228  Q
    ||||||| ||| |||||  |||||||||||||||||||||||||||||| |||||||||||||||| ||| || ||||||| | |||| |    ||||||    
T  15163105 ttataactgggcttaggcgaaggtgagataatatttggataagtaggctacacaaaatttgagttaagcactcatacggaagtgaaagcacaaaattcaa 15163006  T
Q  229 ttcctcattcaccccttgaaataacaat--ttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttt 322  Q
    | | ||||||| || ||| || ||||||  || | |||||||||||||||| |||||||   ||||||||||||||||| || |||||| ||||||    
T  15163005 tccatcattca-cctttggaacaacaattattgtgaaggtactagataatacttgtaac-aattgggacaatcgagtttgaagttactcggatttt 15162912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 39500708 - 39500506
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    ||||||| |||||||||||| ||||| || ||||  |||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||| | |||||    
T  39500708 aatatgaaaagggttcacacacaatcgacatgcaa-tctacatattaccatacgcttgaaaagtttctaaacttcaatcaaaatcaatgtcaatgcacac 39500610  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagata-atatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaa 211  Q
    ||||||||| || ||||||||||| ||| |||||| |||||| ||||  |||||||||||||||||| |||||||||||||||||||||||||||||||     
T  39500609 tttgaggtcattaagggttataactgggcttaggtgaaggtgggatatttatttggataagtaggctacacaaaatttgagttaggcattcctacggaag 39500510  T
Q  212 ttaa 215  Q
    ||||    
T  39500509 ttaa 39500506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 27678177 - 27678343
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||| |||| ||||||     
T  27678177 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataagggggcttaggtg 27678276  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||    
T  27678277 aaggtgaaataatatttggataagtaggctacataaaatttgagttaggcaatcctacggaagttaa 27678343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 56197818 - 56197652
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| | ||||||||||||| ||||||     
T  56197818 tctacatattaccatatgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaaaggttataacggggcttaggtg 56197719  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||    
T  56197718 aaggtgggataatatttggataagtaggttacacaaaatttgagttaggcattcctacagaagttaa 56197652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 3799007 - 3799175
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||| ||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||  ||||||     
T  3799007 tctacatattatcataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacgggacttaggtg 3799106  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaag 217  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||    
T  3799107 aaggtgagatattatttggataagtagggtacacaaaatttgagttaggcactcctacggaagttaaag 3799175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 19861498 - 19861667
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||| |||| |||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  19861498 tctacatattaccatatgcttgaaaagtttttaaatgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacggggcttaggtg 19861597  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctacggaaattaaag 217  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||| | |||||||||    
T  19861598 aaggtgggataatatttggataagtaggctacacaaaattttgagttaggcactcctatgaaaattaaag 19861667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 33411173 - 33411342
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   |||||||||||||||||||| |||||||||||| ||| | ||||||||||||||||| |||||| ||| |||| ||||||     
T  33411173 tctacatattaccataagcttgaaaagtttctaaacgtcgatcaaaatcaatgtcaatgcacactttgaggtctttaagggttttaatggggcttaggtg 33411272  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctacggaaattaaag 217  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||| || |||||||||| ||||||    
T  33411273 aaggtgggataatatttggataagtaggctacacaaaattttgagttagacactcctacggaagttaaag 33411342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 49 - 206
Target Start/End: Original strand, 49637709 - 49637865
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||| |||||||| |||||||||||||||||| ||| | ||||||||||||||||| ||||| | ||||||| ||||||     
T  49637709 tctacatattaccatacgcttgaagagtttctatacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggtaacaacggggcttaggtg 49637808  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctac 206  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  49637809 aaggtg-gataatatttggataagtaggctacacaaaatttgagttaggcactcctac 49637865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 15430978 - 15431116
Alignment:
Q  50 ctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtta 149  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | |||| |||||||||||  ||| |||||| |||| |||||| |    
T  15430978 ctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacattttgaggtcttaaaggattataatggggcttaggtga 15431077  T
Q  150 aggtgagataatatttggataagtaggctgcacaaaatt 188  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  15431078 aggtgggataatatttggataagtaggctacacaaaatt 15431116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 15437592 - 15437730
Alignment:
Q  50 ctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtta 149  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | |||| |||||||||||  ||| |||||| |||| |||||| |    
T  15437592 ctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacattttgaggtcttaaaggattataatggggcttaggtga 15437691  T
Q  150 aggtgagataatatttggataagtaggctgcacaaaatt 188  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  15437692 aggtgggataatatttggataagtaggctacacaaaatt 15437730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 429 - 524
Target Start/End: Complemental strand, 19826693 - 19826598
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaa 524  Q
    |||||||||| ||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||| |||| |||||  ||||| ||||||    
T  19826693 aaacttgaaccattccttgtcctcaaggaatttacttgtaatattgacaatcgacagtaaaataacaattacctaatcaagtgatagtacccaaaa 19826598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 19861295 - 19861430
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| || | ||||   |||||||||||||| |    
T  19861295 aaacttgaatcattccttgtcctcaaggaatttacttgtaacattgacaatcgacagtaaaataacaattacctgatcaagcgatagtatccaaaagttc 19861394  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  19861395 aacaccttactagctaaagatgagctagtttgactt 19861430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 56198021 - 56197886
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    ||||| |||||||||||||||||||||||||| ||||| |  || |||||||||||||||| ||||||||| || | ||||   ||||| |||||||| |    
T  56198021 aaactagaactattccttgtcctcaaggaatttacttgcaaaattgacaatcgacagtaaactaacaattacctgatcaagcgatagtacccaaaagttc 56197922  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    |||| | | ||||| || ||||||||||||||||||    
T  56197921 atctccttactagctaaagatgagctagtttgactt 56197886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 3798804 - 3798939
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  ||||||||||||||||||||| |||||||  || || ||| ||||||||||||||||||| || | ||||   ||||| |||||||| |    
T  3798804 aaacttgaatcattccttgtcctcaaggaatttacttgtaatattgataattgacagtaaaataacaattacctgatcaagcgatagtacccaaaagttc 3798903  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | || ||| ||||| || ||||||||||||||||||    
T  3798904 aactccctactagctaaagatgagctagtttgactt 3798939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 49637505 - 49637575
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||||||||||||||||||||||||| ||||| | ||| ||  ||||||||||||||||||||||    
T  49637505 aaacttgaactattccttgtcctcaaggaatttacttgcatcattgaatatcgacagtaaaataacaatta 49637575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 15430774 - 15430844
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||| ||| ||||||||| ||||||| |||||||  || ||||||||||||||||||||||||||    
T  15430774 aaacttgaaccatttcttgtcctctaggaatttacttgtaatattgacaatcgacagtaaaataacaatta 15430844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 15437388 - 15437458
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||| ||| ||||||||| ||||||| |||||||  || ||||||||||||||||||||||||||    
T  15437388 aaacttgaaccatttcttgtcctctaggaatttacttgtaatattgacaatcgacagtaaaataacaatta 15437458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 429 - 524
Target Start/End: Complemental strand, 15163390 - 15163295
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaa 524  Q
    |||||||||  ||||||||||||||||||||||| ||| | ||| ||||||||| |||||||||||| ||| || | |||||  ||||| ||||||    
T  15163390 aaacttgaatcattccttgtcctcaaggaattcatttgcaacattgacaatcgaaagtaaaataacagttacctgatcaagtgatagtacccaaaa 15163295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 27677974 - 27678109
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| ||||||||||||||| ||||| |||||||  || |||||| ||| ||||||||||||||| || | ||||   ||||| |||||||| |    
T  27677974 aaacttgaaccattccttgtcctcaacgaatttacttgtaatattgacaatggacggtaaaataacaattacctgatcaagcgatagtacccaaaagttc 27678073  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  27678074 aacaccttactagctaaagatgagctagtttgactt 27678109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 447 - 526
Target Start/End: Complemental strand, 39500860 - 39500781
Alignment:
Q  447 gtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagt 526  Q
    |||||||||||||| |||||||  || |||||||||||||||||||||||||| || ||||||   ||||| ||||||||    
T  39500860 gtcctcaaggaatttacttgtaatattgacaatcgacagtaaaataacaattacctgaacaagcgatagtaaccaaaagt 39500781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 33410970 - 33411040
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||  ||||||||||||||||||||| ||||| |  || ||||| ||||||||||||||||||||    
T  33410970 aaacttgaatcattccttgtcctcaaggaatttacttgcaaaattgacaaccgacagtaaaataacaatta 33411040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 19826490 - 19826421
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgag 118  Q
    |||||||||||| |||   ||||||| ||||||||||||||||||||||||| ||| | |||||||||||    
T  19826490 tctacatattactataagcttgaaaaatttctaaacgtcaatcaaaatcaatgtcaatgcacactttgag 19826421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 22090955 - 22091015
Alignment:
Q  37 tcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatc 97  Q
    ||||| ||||||| |||||||||||||||| ||||||| ||||||||  || |||||||||    
T  22090955 tcaacatgcaggtttacatattaccatacacttgaaaattttctaaatatcgatcaaaatc 22091015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 53894921 - 53894882
Alignment:
Q  379 gtgtatatttttcatgatttgttctttgttctctagtacc 418  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  53894921 gtgtatatttttcatgcttttttctttgttctctagtacc 53894882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 180; Significance: 7e-97; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 13 - 344
Target Start/End: Original strand, 99364 - 99692
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||| ||||||||| ||| |||||||||||    
T  99364 aatatgataagggttcacactcaatcaacgtgcaaatctacatattaccatacacttgaaaagtttgtaaacgttaatcaaaattaatgtcattacacac 99463  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaat 212  Q
    |||||||||||| |||||||||||  || |||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||| |||||    
T  99464 tttgaggtctttaagggttataac-aggcttaggtaaaggtgggataatatttggataagtaggctacacaaaatttgagttagacactcctacagaaat 99562  T
Q  213 taaagaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaatta 312  Q
    ||||  ||||||| ||| |||||||||||  |||||| ||||| |  || |||||||||| || ||||||||| | ||||||||||||||||| || |||    
T  99563 taaaacatggatttaatccctcattcaccttttgaaacaacaa-tggtacaggtactagagaacatttgtaac-tgttgggacaatcgagtttgaattta 99660  T
Q  313 ctcagatttttcattgtttgtcccttgctttt 344  Q
    |||||||||||||||||||||||||| |||||    
T  99661 ctcagatttttcattgtttgtcccttactttt 99692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 180; Significance: 7e-97; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 43 - 330
Target Start/End: Complemental strand, 32112034 - 32111747
Alignment:
Q  43 tgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtt 142  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||| |||| |    
T  32112034 tgcaggtctacatattatcatacgcttgaaaagtttctaaacgtcaatcaaaatcaacgtcattacacactttgaggtctttaaaggttataatggggct 32111935  T
Q  143 taggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaagaatggattcaattcctcattcaccc 242  Q
    ||||| |||||| |||| ||||| ||||||||||||  |||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||    
T  32111934 taggtaaaggtgggatattatttagataagtaggctatacaaaatttgagttagacactcctacggaaattaaagcatggattcaatccctcattcaccc 32111835  T
Q  243 cttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttttcattgtt 330  Q
    ||||||| |||||||| ||||| ||||||| |||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  32111834 cttgaaacaacaatttgtaaagatactagagaatattggtaacttgttgggacaatcgagtttaaagttactcatatttttcattgtt 32111747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 17 - 334
Target Start/End: Complemental strand, 21633371 - 21633056
Alignment:
Q  17 tgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttg 116  Q
    |||||||| ||||||| || || || || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||    
T  21633371 tgataaggtttcacacacagtcgacatgtaggtctatatattaccatacacttgaaaagtttctaaacgtcaatcaaaatcattgtcattacacactttg 21633272  T
Q  117 aggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaa 216  Q
    |||||||| |||||||||||| || ||| || || ||| ||||||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||||    
T  21633271 aggtctttaagggttataacgaggcttatgtaaatgtgggataatatttggataagtaggctacacgaaatttgagttaggaactcctacggaaattaaa 21633172  T
Q  217 gaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactca 316  Q
    | |  |||| ||| |||||||||||| |||||| ||||| || ||||||||||||| | |||||||||| | | ||||||||||||||| ||||||||||    
T  21633171 gcaaagattaaatccctcattcaccctttgaaacaacaa-ttgtaaaggtactagagattatttgtaac-tatcgggacaatcgagtttgaaattactca 21633074  T
Q  317 gatttttcattgtttgtc 334  Q
    |||||||| | |||||||    
T  21633073 gatttttcttcgtttgtc 21633056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 12981361 - 12981566
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||| | |||||    
T  12981361 aatatgataagggttcacactcaatcaacatgcaaatctacatattaccatacgcttgaaaagtttctaaacatcaatcaaaatcaatgtcaatgcacac 12981460  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctacggaaa 211  Q
    |||||||||||  ||||||||||||||| |||||| |||||| |||||||||| ||||||||||||  |||||| ||||||||||||||||||||| ||     
T  12981461 tttgaggtcttgaagggttataacggggcttaggtgaaggtgggataatatttcgataagtaggctatacaaaattttgagttaggcattcctacgaaag 12981560  T
Q  212 ttaaag 217  Q
    ||||||    
T  12981561 ttaaag 12981566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 22 - 322
Target Start/End: Original strand, 11126791 - 11127090
Alignment:
Q  22 agggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtc 121  Q
    ||||||||||| ||||| || ||||  || ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| | ||||||||| ||||    
T  11126791 agggttcacacacaatcgacatgcaa-tccacatattaccatacacttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgtggtc 11126889  T
Q  122 tttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaagaatg 221  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||  ||     
T  11126890 tttcagggttataacggggcttagatgaaggtgggataatatttggataagtaggctacacaaaatttgagttaggcactcctacggaagttaaaacata 11126989  T
Q  222 gattcaattcctcattcaccccttgaaataacaat--ttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagat 319  Q
     ||||||| |  |||||| || ||| || ||||||  || ||| ||||||||| | || |||||||   ||| ||||||||||||| || ||||||||||    
T  11126990 aattcaatccaacattca-cctttggaacaacaattcttgtaagggtactagagattacttgtaac-aattgagacaatcgagtttgaagttactcagat 11127087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 49 - 206
Target Start/End: Complemental strand, 12745738 - 12745581
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| ||||||     
T  12745738 tctacatattaccatacacttgaaaaatttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacggggcttaggtg 12745639  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctac 206  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12745638 aaggtgggataatatttggataagtaggctacacaaaatttgagttaggcattcctac 12745581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 14968603 - 14968413
Alignment:
Q  17 tgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttg 116  Q
    |||||||||||||||| || || || ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  14968603 tgataagggttcacacacagtcgacatgcaggtctacatattatcatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttg 14968504  T
Q  117 aggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctac 206  Q
    |||||||  | ||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||    
T  14968503 aggtcttaaatggttataacggggcttaggtgaaggtgcgataatatttggataagtaggctacacaaaattttgagttaggcactcctac 14968413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 49 - 217
Target Start/End: Complemental strand, 25456396 - 25456227
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| ||||||     
T  25456396 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacggggcttaggtg 25456297  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctacggaaattaaag 217  Q
    |||||| ||||||||||||||||||||||| || |||| ||||||||||||| |||||||||| ||||||    
T  25456296 aaggtgggataatatttggataagtaggctacataaaattttgagttaggcactcctacggaagttaaag 25456227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 23380025 - 23380191
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  23380025 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacggggcttaggtg 23380124  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |  ||| |||| |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||    
T  23380125 attgtgggatattatttggataagtaggctacacaaaatttgagttaggcactcctacggaagttaa 23380191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 51 - 217
Target Start/End: Complemental strand, 24409314 - 24409148
Alignment:
Q  51 tacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggttaa 150  Q
    ||||||||||||||   |||||||||||||||||||||||||||||| || ||| | ||||||||||||||||| |||||||||| |||| |||||| ||    
T  24409314 tacatattaccatatgcttgaaaagtttctaaacgtcaatcaaaatccatgtcaatgcacactttgaggtctttaagggttataatggggcttaggtgaa 24409215  T
Q  151 ggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaag 217  Q
    |||| |||| |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  24409214 ggtgggatattatttggataagtaggctacacaaaatttgagttaggcactcctacggaagttaaag 24409148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 22301056 - 22300890
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   || |||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||| | | ||| ||     
T  22301056 tctacatattaccataagcttaaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttttagggttataacagagcttatgtg 22300957  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  22300956 aaggtgggataatatttggataagtaggctacataaaatttgagttaggcattcctacggaagttaa 22300890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 28108879 - 28109023
Alignment:
Q  50 ctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcatta-----cacactttgaggtctttcagggttataacggggttta 144  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||| | | ||     ||||||||||||||||  |||||||||| |||| |||    
T  28108879 ctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgttaatataatgcacactttgaggtcttaaagggttataatggggctta 28108978  T
Q  145 ggttaaggtgagataatatttggataagtaggctgcacaaaattt 189  Q
     || |||||| ||||||||||||||||||||||| ||||||||||    
T  28108979 agtgaaggtgggataatatttggataagtaggctacacaaaattt 28109023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 422 - 532
Target Start/End: Complemental strand, 21633550 - 21633440
Alignment:
Q  422 caacctaaaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatcca 521  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||| |||| ||||   ||||| |||    
T  21633550 caacctcaaacttgaatcattccttgtcctcaaggaattcacttgtaatattgacaatcgacaataaaataacaattacctaatcaagcgatagtaccca 21633451  T
Q  522 aaagtccatct 532  Q
    ||||| |||||    
T  21633450 aaagttcatct 21633440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 12745941 - 12745806
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||||||||||||||||||||||||| ||||| | ||| ||||||||| |||||||||||||||| || | ||||   ||||| |||||||| |    
T  12745941 aaacttgaactattccttgtcctcaaggaatttacttgcatcattgacaatcgatagtaaaataacaattacctgatcaagcgatagtacccaaaagttc 12745842  T
Q  529 atcttcc-tctagccaatgatgagctagtttgactt 563  Q
    | || ||  ||||| || ||||||||| ||||||||    
T  12745841 aactcccgactagctaaagatgagctaatttgactt 12745806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 7836963 - 7836889
Alignment:
Q  43 tgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttga 117  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  7836963 tgcaagtctacatattaccatatgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatacacactttga 7836889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 14968775 - 14968629
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  |||||||||||||||||||||||||||||   | ||||||||| ||||||||| |||||| || | ||||   ||||| |||||||| |    
T  14968775 aaacttgaatcattccttgtcctcaaggaattcacttgtaatgttgacaatcgatagtaaaatagcaattacctgatcaagcgatagtacccaaaagttc 14968676  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactttcatgcatcca 574  Q
    |||| ||| ||| | ||  ||||||||||||||||| | ||||||||    
T  14968675 atctccctactaactaaaaatgagctagtttgacttgcttgcatcca 14968629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 23379822 - 23379892
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||  |||||||||| |||||||||| |||||||  || ||||||||||||||||||||||||||    
T  23379822 aaacttgaatcattccttgtcatcaaggaatttacttgtaatattgacaatcgacagtaaaataacaatta 23379892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 7836866 - 7836819
Alignment:
Q  159 aatatttggataagtaggctgcacaaaatttgagttaggcattcctac 206  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  7836866 aatatttggataactaggctacacaaaatttgagttaggcactcctac 7836819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 11126613 - 11126748
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| ||| || |||||||||||||| ||||| |  || |||||||||||||||||||| ||||| || | ||||   ||||| |||||||| |    
T  11126613 aaacttgaaccatttctagtcctcaaggaatttacttgcaaaattgacaatcgacagtaaaataaaaattacctgatcaagcgatagtacccaaaagttc 11126712  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | || | | | ||| || ||||||||||||||||||    
T  11126713 aactccttaccagctaaagatgagctagtttgactt 11126748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 24409518 - 24409383
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||  ||||||||||||||||||||| |||||||   | |||||  ||||||||||||||||||| || | |||||  ||||| | |||||| |    
T  24409518 aaacttgaatcattccttgtcctcaaggaatttacttgtaaatttgacaaatgacagtaaaataacaattacctgatcaagtgatagtacctaaaagttc 24409419  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  24409418 aacaccttactagctaaagatgagctagtttgactt 24409383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 25978763 - 25978724
Alignment:
Q  379 gtgtatatttttcatgatttgttctttgttctctagtacc 418  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  25978763 gtgtatatttttcatgctttgttctttgttctctagtacc 25978724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 21632996 - 21632957
Alignment:
Q  379 gtgtatatttttcatgatttgttctttgttctctagtacc 418  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  21632996 gtgtatatttttcatgctctgttctttgttctctagtacc 21632957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 177; Significance: 5e-95; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 16 - 327
Target Start/End: Original strand, 13810586 - 13810894
Alignment:
Q  16 atgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacacttt 115  Q
    |||||||||||||||||  | || || | || ||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  13810586 atgataagggttcacac--agtcgacatacaagtctacatattaccatactcttgaaaagtctctaaacgtcaatcaaaatcaatgtcattacacacttt 13810683  T
Q  116 gaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||||||||||||||||||| |  |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  13810684 gaggtctttcagggttataacgtgtcttaggtaaaggtgggataatatttggataagtaggctacacaaaatttgagttaggcactcctacggaaattaa 13810783  T
Q  216 agaatggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactc 315  Q
    || | | ||||||| |||||||||||| |||||| ||||| || ||||||||||||| |||||||||||||| || ||| |||||||||| |||||||||    
T  13810784 agcacgaattcaatccctcattcaccctttgaaacaacaa-ttgtaaaggtactagagaatatttgtaacttgttaggataatcgagtttgaaattactc 13810882  T
Q  316 agatttttcatt 327  Q
     |||||||||||    
T  13810883 tgatttttcatt 13810894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 163 - 421
Target Start/End: Complemental strand, 16222904 - 16222638
Alignment:
Q  163 tttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaagaatggattcaattcctcattcaccccttgaaataacaatttataa 262  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||| || ||||||| ||||||||||||||||| |||    
T  16222904 tttggataagtaggctacacaaaatttgagttaggcactcctacggaagttaaagcatggattcaatcccacattcacaccttgaaataacaatttgtaa 16222805  T
Q  263 aggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttttcattgtttgtcccttgctttttattc--------nnnnn 354  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||||| || ||||| ||||                 
T  16222804 aggtactagagaatatttgtaacttgttgggacaatcgagtttaaagttactcagatttttcatactttgtcctttacttttcattcttttttttttctt 16222705  T
Q  355 nnnnatacaccattttgagtttgagtgtatatttttcatgatttgttctttgttctctagtacctcc 421  Q
        |||||||||||| | ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  16222704 tctgatacaccatttttattttgagtgtatattttttatgatttgttctttattctctagtacctcc 16222638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 45288322 - 45288515
Alignment:
Q  21 aagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggt 120  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | |||||||||||||    
T  45288322 aagggttcacacacaatcgacatgcaa-tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggt 45288420  T
Q  121 ctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||  ||||||||||||| | |||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  45288421 cttaaagggttataacggagcttaggtgaaggtgggataatatttggataagtaggctacacaaaatttgagttaggcattcctacggaagttaa 45288515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 9274224 - 9274417
Alignment:
Q  26 ttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttc 125  Q
    ||||||| || || || |||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  9274224 ttcacacacagtcgacatgcaggtctacatattaccatacgcttgaagagtttctaaacatcaatcaaaatcaatatcactacacactttgaggtctttc 9274323  T
Q  126 agggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaagaa 219  Q
    |||||||| |||||  |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||| || ||||||||    
T  9274324 agggttatcacgggtcttaggtgaaggtgggataatatttggataagtaggctacacaaaatttgagttaggcactcatacgaaagttaaagaa 9274417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 4544720 - 4544555
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| ||||||     
T  4544720 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacggggcttaggtg 4544621  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||||||||||||| |||| ||||    
T  4544620 aaggtgagat-atatttggataaataggctacacaaaatttgagttaggcattcctatggaagttaa 4544555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 49 - 206
Target Start/End: Complemental strand, 20595687 - 20595529
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaata-tcattacacactttgaggtctttcagggttataacggggtttaggt 147  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||  ||| | ||||||||||||||||  ||||||||||||||| ||||||    
T  20595687 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaattgtcaatgcacactttgaggtcttaaagggttataacggggcttaggt 20595588  T
Q  148 taaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctac 206  Q
     |||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20595587 gaaggtgggataatatttggataagtaggctacacaaaatttgagttaggcactcctac 20595529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 49 - 216
Target Start/End: Complemental strand, 22256244 - 22256077
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  22256244 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacggggcttaggtg 22256145  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaa 216  Q
    |  | | |||| |||||||||||||||||| |||||||||||||||||||| ||||||| || |||||    
T  22256144 actgagggatattatttggataagtaggctacacaaaatttgagttaggcactcctacgaaagttaaa 22256077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 22256447 - 22256312
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||||||||||||||||||||||||| |||||||  |  |||||||||||||||||||||||||| || | ||||   ||||| |||||||| |    
T  22256447 aaacttgaactattccttgtcctcaaggaatttacttgtaatagtgacaatcgacagtaaaataacaattacctgatcaagcgatagtaaccaaaagttc 22256348  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  22256347 aacaccttactagctaaagatgagctagtttgactt 22256312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 45288146 - 45288281
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| ||||||||||||||||||||| ||||| |  || |||||||||||||||||||||||||| || | ||||   ||||| |||||||| |    
T  45288146 aaacttgaaccattccttgtcctcaaggaatttacttgcaatattgacaatcgacagtaaaataacaattacctgatcaagcgatagtacccaaaagttc 45288245  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  45288246 aacaccttactagctaaagatgagctagtttgactt 45288281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 433 - 562
Target Start/End: Original strand, 9274046 - 9274176
Alignment:
Q  433 ttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtccatct 532  Q
    |||||| ||||||||||||||||||||  ||||| || || |||||||||||||||||||||||||| || | |||||   |||| |||||||| || ||    
T  9274046 ttgaaccattccttgtcctcaaggaatctacttgcagtattgacaatcgacagtaaaataacaattacctgatcaagtgacagtacccaaaagttcaact 9274145  T
Q  533 tcct-ctagccaatgatgagctagtttgact 562  Q
     | | ||||| || |||||||||||||||||    
T  9274146 ccttactagctaaagatgagctagtttgact 9274176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 429 - 499
Target Start/End: Complemental strand, 20595892 - 20595822
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||||||||||||||||||||||||||||||| |  || |||||  |||||||||||||||||||    
T  20595892 aaacttgaactattccttgtcctcaaggaattcacttgaaaaattgacaaatgacagtaaaataacaatta 20595822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 26137048 - 26137118
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    ||||||||||  |||||||||||||||||||||||||| |   | |||||  |||||||||||||||||||    
T  26137048 aaacttgaaccgttccttgtcctcaaggaattcacttgaaaatttgacaaatgacagtaaaataacaatta 26137118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 563
Target Start/End: Original strand, 13810460 - 13810549
Alignment:
Q  475 acaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtccatcttcc-tctagccaatgatgagctagtttgactt 563  Q
    ||||||||||||||||||||||||| || | |||||  ||||| |||||||| ||||| ||  ||||| |||  ||||||||||||||||    
T  13810460 acaatcgacagtaaaataacaattacctgatcaagtgatagtacccaaaagttcatctcccgactagctaatagtgagctagtttgactt 13810549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 26137252 - 26137301
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatca 98  Q
    ||||||||||||||||   |||||| ||||||||||||||||||||||||    
T  26137252 tctacatattaccataagcttgaaaggtttctaaacgtcaatcaaaatca 26137301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 9274462 - 9274520
Alignment:
Q  263 aggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttt 322  Q
    |||||||||| |||| |||||||| || |||||||||||||||||| |||||| ||||||    
T  9274462 aggtactagagaatacttgtaactgtt-gggacaatcgagtttaaagttactcggatttt 9274520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 1e-89; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 22 - 323
Target Start/End: Complemental strand, 49718640 - 49718337
Alignment:
Q  22 agggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtc 121  Q
    ||||||||||| ||||| || ||||  |||||||||||||||||  ||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||    
T  49718640 agggttcacacacaatcgacatgcaaatctacatattaccatacgcttgaaaaatttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtc 49718541  T
Q  122 tttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattcctacggaaattaaag-aa 219  Q
    ||  ||||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| |||||| |     
T  49718540 ttaaagggttataacggggcttaggtgaaggtgggataatatttggataagtaggctacacaaaattttgagttaggcactcctacggaagttaaagcac 49718441  T
Q  220 tggattcaattcctcattcaccccttgaaataacaatttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagat 319  Q
       ||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||    
T  49718440 aaaattcaatccctcattcaccccttgaaacaacaatttgtaaaggtactagagaatatttgtaacttgttgggacaatcgagtttaaagttactaagat 49718341  T
Q  320 tttt 323  Q
    ||||    
T  49718340 tttt 49718337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 22454492 - 22454685
Alignment:
Q  13 aatatgataagggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacac 112  Q
    |||||||| | |||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||| | |||||    
T  22454492 aatatgatcaaggttcacactcaatcaacatgcaggtctacatattaccatacgcttgaaaagtttctaaacatcaatcaaaatcaatgtcaatgcacac 22454591  T
Q  113 tttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaa-tttgagttaggcattccta 205  Q
    |||||||||||  ||||||||||||||| |||||| |||||| ||||||| |||||||| |||||| ||||||| |||||||||||||||||||    
T  22454592 tttgaggtcttaaagggttataacggggcttaggtgaaggtgggataatacttggataaataggctacacaaaattttgagttaggcattccta 22454685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 21019577 - 21019743
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| |  |||||||||||||||| | ||||||||||||| ||||||     
T  21019577 tctacatattaccatatgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgtacactttgaggtctttaatggttataacggggcttaggtg 21019676  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  21019677 aaggtgggataatatttggataagtaggctacacaaaatttgagttaggcattcttacggaagttaa 21019743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 49 - 207
Target Start/End: Complemental strand, 45940410 - 45940252
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  45940410 tctacatattaccataagcttgaaaagtttttaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacggggcttaggtg 45940311  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacg 207  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  45940310 aaggtgggataatatttgaataagtaggctacacaaaatttgagttaggcattcctacg 45940252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 13640221 - 13640387
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   || |||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||| | | ||| ||     
T  13640221 tctacatattaccataagcttaaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttttagggttataacagagcttatgtg 13640320  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  13640321 aaggtgggataatatttggataagtaggctacataaaatttgagttaggcattcctacggaagttaa 13640387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 45940613 - 45940478
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||| || | ||||   ||||| |||||||| |    
T  45940613 aaacttgaactattccttgtcctcaaggaatttacttgtaatattgacaatcgacagtaaaataacaattacctgatcaagcgatagtaaccaaaagttc 45940514  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  45940513 aacaccttactagctaaagatgagctagtttgactt 45940478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 49718818 - 49718683
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||||||||||||||||||||||||| | ||| |  || |||||| ||||||||||||||||||| |||| ||||   ||||| |||||||| |    
T  49718818 aaacttgaactattccttgtcctcaaggaatttatttgcaatattgacaattgacagtaaaataacaattacctaatcaagcgatagtacccaaaagttc 49718719  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | || | |  |||| |||||||||||||||||||||    
T  49718718 aactccttaatagctaatgatgagctagtttgactt 49718683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 21019375 - 21019445
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||| ||||||||||||||||||||| |||||||  || ||||||||| | |||||| |||||||    
T  21019375 aaacttgaaccattccttgtcctcaaggaatttacttgtaatattgacaatcgataataaaattacaatta 21019445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 115; Significance: 5e-58; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 4059 - 4225
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||||     
T  4059 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttaagggttataacggggcttaggtg 4158  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  4159 aaggtgggatattatttggataagtaggctacacaaaatttgagttaggcattcctacggaagttaa 4225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 429 - 526
Target Start/End: Original strand, 3855 - 3952
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagt 526  Q
    |||||||||| ||||||||||||||||||||| ||||| |   | |||||||||||||||| ||||||||  |||| |||||  ||||| ||||||||    
T  3855 aaacttgaaccattccttgtcctcaaggaatttacttgcaaagttgacaatcgacagtaaattaacaattccctaatcaagtgatagtacccaaaagt 3952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 108; Significance: 7e-54; HSPs: 4)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 49 - 216
Target Start/End: Complemental strand, 12473 - 12307
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||| |||||||    
T  12473 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtctttcaaggttataacggggcttaggtt 12374  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaa 216  Q
    |||||| || |||||||| ||||||||||| |||||||||||||||||||| |||||| ||| |||||    
T  12373 aaggtg-gagaatatttgaataagtaggctacacaaaatttgagttaggcactcctacagaagttaaa 12307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 49 - 216
Target Start/End: Complemental strand, 26489 - 26323
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| | ||||||||||||| |||||||    
T  26489 tctacatattaccatacgcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaatgcacactttgaggtcttttatggttataacggggcttaggtt 26390  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaa 216  Q
    |||||| || |||||||| ||||||||||| |||||||||||||||||||| |||||| ||| |||||    
T  26389 aaggtg-gagaatatttgaataagtaggctacacaaaatttgagttaggcactcctacagaagttaaa 26323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 12678 - 12543
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    ||||||||||||||| |||||||||||||||| ||||| | ||| |||||||||||||||||||||||||| || | ||||   |||||||||||||| |    
T  12678 aaacttgaactattcattgtcctcaaggaatttacttgcatcattgacaatcgacagtaaaataacaattacctgatcaagcgatagtatccaaaagttc 12579  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | || ||| ||||| || ||||||||||||||||||    
T  12578 aactccctactagctaaagatgagctagtttgactt 12543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 429 - 563
Target Start/End: Complemental strand, 26694 - 26559
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    ||||||||||||||| |||||||||||||||| ||||| | ||| |||||||||||||||||||||||||| || | ||||   |||||||||||||| |    
T  26694 aaacttgaactattcattgtcctcaaggaatttacttgcatcattgacaatcgacagtaaaataacaattacctgatcaagcgatagtatccaaaagttc 26595  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | || ||| ||||| || ||||||||||||||||||    
T  26594 aactccctactagctaaagatgagctagtttgactt 26559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 106; Significance: 1e-52; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 786 - 943
Alignment:
Q  51 tacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggttaa 150  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| |||||| ||    
T  786 tacatattaccatacgcttgaaaagtttctaaacatcaatcaaaatcaatgtcaatgcacactttgaggtcttaaagggttataacggggcttaggtgaa 885  T
Q  151 ggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacgg 208  Q
    ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  886 ggtgcaataatatttggataagtaggctacacaaaatttgagttaggcattcctacgg 943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 524
Target Start/End: Original strand, 581 - 676
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaa 524  Q
    |||||||||| ||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||  ||| |||||  ||||| ||||||    
T  581 aaacttgaaccattccttgtccgcaaggaattcatttgtaacattgacaatcgacagtaaaataacaattacttaatcaagtgatagtacccaaaa 676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 105; Significance: 4e-52; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 49 - 322
Target Start/End: Complemental strand, 28239 - 27967
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||| |||| ||||||     
T  28239 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaatgtcaattcacactttgaggtctttaagggttataatggggcttaggtg 28140  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaagaatggattcaattcctcattcaccccttgaa 248  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||| || ||||||| || |||||| |   ||||||| | ||||||| || ||| |    
T  28139 aaggtgggataatatttgaataagtaggctacacaaaatttgagttagacactcctacgaaagttaaagca-caattcaatccatcattca-cctttgga 28042  T
Q  249 ataacaat--ttataaaggtactagataatatttgtaactttttgggacaatcgagtttaaaattactcagatttt 322  Q
    | ||||||  || ||| ||||||||| | ||||||||||   ||||||||||||||||| || |||||| ||||||    
T  28041 acaacaattcttgtaagggtactagagattatttgtaac-aattgggacaatcgagtttgaagttactcggatttt 27967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 432 - 564
Target Start/End: Complemental strand, 28437 - 28304
Alignment:
Q  432 cttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtccatc 531  Q
    ||||||| ||||||||||||||||||||| ||||| | ||| || |||| |||||||||||||||||| || | ||||   ||||| |||||||| || |    
T  28437 cttgaaccattccttgtcctcaaggaatttacttgcatcattgaaaatcaacagtaaaataacaattacctgatcaagcgatagtacccaaaagttcaac 28338  T
Q  532 ttcc-tctagccaatgatgagctagtttgacttt 564  Q
    | ||  ||||| || |||||||||||||||||||    
T  28337 tcccgactagctaaagatgagctagtttgacttt 28304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 100; Significance: 4e-49; HSPs: 4)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 49 - 207
Target Start/End: Complemental strand, 28060 - 27901
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaata-tcattacacactttgaggtctttcagggttataacggggtttaggt 147  Q
    ||||||||||||||||   |||||| |||||||||||||||||||||||| |  ||| | ||||||||||||||||| ||||||||||||||| ||||||    
T  28060 tctacatattaccataagcttgaaaggtttctaaacgtcaatcaaaatcatttgtcaatgcacactttgaggtctttaagggttataacggggcttaggt 27961  T
Q  148 taaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacg 207  Q
     |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27960 gaaggtgggataatatttggataagtaggctacacaaaatttgagttaggcattcctacg 27901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 23824 - 23739
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaa-tatcattacacactttgaggtctttcagggttat 133  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||| | ||| | ||||||||||||||||  ||||||||    
T  23824 tctacatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaattgtcaatgcacactttgaggtcttgaagggttat 23739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 466
Target Start/End: Complemental strand, 28265 - 28228
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttg 466  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  28265 aaacttgaaccgttccttgtcctcaaggaattcacttg 28228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 23741 - 23686
Alignment:
Q  161 tatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaag 217  Q
    |||||||||||||||||| || |||||||||||||| || ||||||| || ||||||    
T  23741 tatttggataagtaggctaca-aaaatttgagttagacactcctacgaaagttaaag 23686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 95; Significance: 4e-46; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 1275 - 1441
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttgaggtctttcagggttataacggggtttaggtt 148  Q
    ||||||||||||||||   ||||||||||||||||| ||||||||||||||| ||| | ||||| ||||||||||  | |||||||| |||| ||||||     
T  1275 tctacatattaccataagcttgaaaagtttctaaacatcaatcaaaatcaatgtcaatgcacacattgaggtcttaaaaggttataaaggggcttaggtg 1374  T
Q  149 aaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaa 215  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  1375 aaggtgggataatatttggataagtaggctacacaaaattcgagttaggcattcctacggaagttaa 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 563
Target Start/End: Original strand, 1068 - 1203
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| ||||||||||||||||||||  ||||| |  || |||||| ||||||||||||||||||| || | |||||  ||||| |||||||| |    
T  1068 aaacttgaaccattccttgtcctcaaggaatctacttgcaatattgacaatagacagtaaaataacaattacctgatcaagtgatagtacccaaaagttc 1167  T
Q  529 atcttcct-ctagccaatgatgagctagtttgactt 563  Q
    | |  | | ||||| || ||||||||||||||||||    
T  1168 aacaccttactagctaaagatgagctagtttgactt 1203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 88; Significance: 6e-42; HSPs: 3)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 1635 - 1493
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaaacaagtagtagtatccaaaagtcc 528  Q
    |||||||||| ||||||||||||   |||||| |||||||  || ||||||| |||||||||||||||||  |||| ||||||||||||||||||||| |    
T  1635 aaacttgaaccattccttgtcct---ggaatttacttgtaaaattgacaatcaacagtaaaataacaatttcctaaccaagtagtagtatccaaaagttc 1539  T
Q  529 atcttcctctagccaatgatgagctagtttgactttcatgcatcca 574  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  1538 atctttctctagccaatgatgagctagtttgactttcatgcatcca 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 366 - 421
Target Start/End: Complemental strand, 4598 - 4543
Alignment:
Q  366 attttgagtttgagtgtatatttttcatgatttgttctttgttctctagtacctcc 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4598 attttgagtttgagtgtatatttttcatgatttgttctttgttctctagtacctcc 4543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 1468 - 1419
Alignment:
Q  16 atgataagggttcacactcaatcaacgtgcaggtctacatattaccatac 65  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1468 atgataagggttcacactcaatcaacgtgcaggtctatatattaccatac 1419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 40 - 206
Target Start/End: Original strand, 49523 - 49689
Alignment:
Q  40 acgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaatatcattacacactttga-ggtctttcagggttataacgg 138  Q
    ||||||| ||||||||||||||||||  |||||||||||||| |||||||||||| |  || |||| ||||| ||| | ||||||| |||||||||||||    
T  49523 acgtgcaagtctacatattaccatacgcttgaaaagtttctagacgtcaatcaaagtacatgtcatcacacattttaaaggtcttt-agggttataacgg 49621  T
Q  139 ggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctac 206  Q
     |||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  49622 agtttaggtaaaggtgggataatatttggataagtaagctacacaaaatttgagttaggcattcctac 49689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 85; Significance: 4e-40; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 28392 - 28202
Alignment:
Q  24 ggttcacactcaatcaacgtgcaggtctacatattaccatacaattgaaaagtttctaaacgtcaatcaaaatcaata-tcattacacactttgaggtct 122  Q
    ||||||||| ||||| || ||||  |||| |||||||||||   |||||||||||||||||||||||||||||||||  ||| | |||||||||||||||    
T  28392 ggttcacacacaatcgacatgcaa-tctagatattaccataagcttgaaaagtttctaaacgtcaatcaaaatcaattgtcaatgcacactttgaggtct 28294  T
Q  123 ttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacggaaattaaag 217  Q
    || ||||||||||||||| | |||| |||||||||||   |||||||||||||||| || ||||||||||||||||| ||||||| || ||||||    
T  28293 ttaagggttataacggggctaaggtgaaggtgagata---tttggataagtaggctacaaaaaatttgagttaggcactcctacgaaagttaaag 28202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 499
Target Start/End: Complemental strand, 28570 - 28500
Alignment:
Q  429 aaacttgaactattccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaatta 499  Q
    |||||||||| ||||||||||||||||||||||||||| |   | |||||  |||||||||||||||||||    
T  28570 aaacttgaaccattccttgtcctcaaggaattcacttgaaaacttgacaaatgacagtaaaataacaatta 28500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 96182 - 96290
Alignment:
Q  108 cacactttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacg 207  Q
    ||||| ||||||||||  ||||||||||||||  |||||| |||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  96182 cacacattgaggtcttaaagggttataacgggacttaggtgaaggtgggataatatttggataagtaggctacacaacaattgagttaggcattcctacg 96281  T
Q  208 gaaattaaa 216  Q
    ||| |||||    
T  96282 gaagttaaa 96290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 96139 - 96180
Alignment:
Q  49 tctacatattaccatacaattgaaaagtttctaaacgtcaat 90  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  96139 tctacatattaccatacgcttgaaaagtttctaaacgtcaat 96180  T

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Target: scaffold1785 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 575 - 468
Alignment:
Q  108 cacactttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacg 207  Q
    ||||||||||||||||  ||| ||||||||||| | |||| ||||||  |||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  575 cacactttgaggtcttaaagg-ttataacggggatcaggtgaaggtggaataatatttggataagtaggctacacaacatttgagttaggcatttctacg 477  T
Q  208 gaaattaaa 216  Q
    ||| |||||    
T  476 gaagttaaa 468  T

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Target: scaffold0035 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 63185 - 63078
Alignment:
Q  108 cacactttgaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtaggctgcacaaaatttgagttaggcattcctacg 207  Q
    ||||||||||||||||  ||| ||||||||||| | |||| ||||||  |||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  63185 cacactttgaggtcttaaagg-ttataacggggatcaggtgaaggtggaataatatttggataagtaggctacacaacatttgagttaggcatttctacg 63087  T
Q  208 gaaattaaa 216  Q
    ||| |||||    
T  63086 gaagttaaa 63078  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 39955 - 40024
Alignment:
Q  107 acacacttt-gaggtctttcagggttataacggggtttaggttaaggtgagataatatttggataagtagg 176  Q
    ||||||||| ||||||||||| ||||||| || || ||||||||||||| ||| ||||||||| |||||||    
T  39955 acacactttagaggtctttcaaggttatatcgtggcttaggttaaggtgggat-atatttggaaaagtagg 40024  T

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Target: scaffold0718 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 1839 - 1791
Alignment:
Q  107 acacacttt-gaggtctttcagggttataacggggtttaggttaaggtg 154  Q
    ||||||||| ||||||||||||||||||| || || |||||||||||||    
T  1839 acacactttagaggtctttcagggttatagcgtggcttaggttaaggtg 1791  T

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Target: scaffold0233 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 440 - 504
Target Start/End: Complemental strand, 9120 - 9056
Alignment:
Q  440 attccttgtcctcaaggaattcacttgtagcatagacaatcgacagtaaaataacaattatctaa 504  Q
    ||||||||||||  ||||||| ||||||| ||| ||||||| ||| |||||||| ||||| ||||    
T  9120 attccttgtcctttaggaatttacttgtaacattgacaatcaacaataaaataataattacctaa 9056  T

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