View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6586_low_1 (Length: 353)
Name: NF6586_low_1
Description: NF6586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6586_low_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 12 - 353
Target Start/End: Original strand, 33055740 - 33056081
Alignment:
| Q |
12 |
tcatcaatggacacttaatagagaaaagcatggaggaaatccaagctcatcaccttcgccgtttcttggaagcctttctcgacatcagttttcgcaggaa |
111 |
Q |
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| T |
33055740 |
tcataaatggacacttaatagagaaaagtatggaggaaatccaagctcatcaccttcgccgtttcttgcaagcctttctcgacatcagttttcgcaggaa |
33055839 |
T |
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| Q |
112 |
accacaatttttacgccactcatccaaaccatattttgaaagtaaatcattcattaagggtaatgcttataggtgacgtgattagtaggtgctgtgtgag |
211 |
Q |
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| T |
33055840 |
accacaatttttacgccactcatccaaaccatattttgaaagtaaatcattcattaagggtaatgcttataggtgacgtgattagtaggtgctgtgtgag |
33055939 |
T |
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| Q |
212 |
cttgcgatgcatggtagtggctaatgattccatagagaagtgaataattttgaaaccagttgttccggttgtccatgaataatttttaatgaaaaggatg |
311 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| |
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| T |
33055940 |
cttgtgatgcatggtagtggctaatgattccatagagaagtgaataattttgaaaccagctgttccggttgcccatgaataatttttaatgaaaagaatg |
33056039 |
T |
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| Q |
312 |
atgtggcaccgtaatagagtgtgtgacgataacaataacatt |
353 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
33056040 |
atgtggcaccgtaatagagtgtgtgacgataacaataacatt |
33056081 |
T |
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